AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29378

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29378.t1 MTR_3g077440 96.520 1523 38 2 10 1523 9 1525 0.0 3013
MS.gene29378.t1 MTR_3g077440 95.929 1523 38 3 10 1523 9 1516 0.0 2986
MS.gene29378.t1 MTR_3g077440 95.732 1523 38 3 10 1523 9 1513 0.0 2980
MS.gene29378.t1 MTR_3g077440 95.141 1523 38 4 10 1523 9 1504 0.0 2953
MS.gene29378.t1 MTR_3g077450 65.138 1592 397 26 12 1522 16 1530 0.0 1817
MS.gene29378.t1 MTR_3g077450 64.196 1592 388 27 12 1522 7 1497 0.0 1777
MS.gene29378.t1 MTR_3g077450 62.779 1389 362 24 213 1522 1 1313 0.0 1534
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29378.t1 AT4G24680 34.596 1558 766 50 16 1508 14 1383 0.0 597
MS.gene29378.t1 AT4G24680 34.596 1558 766 50 16 1508 13 1382 0.0 597
MS.gene29378.t1 AT4G24680 34.596 1558 766 50 16 1508 13 1382 0.0 597
MS.gene29378.t1 AT4G24680 34.224 1572 767 51 16 1508 14 1397 0.0 590
MS.gene29378.t1 AT4G24680 33.890 1558 752 50 16 1508 13 1357 1.80e-179 574

Find 431 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGTTGATGCCTGAAATT+TGG 0.129908 3.2:-68490772 None:intergenic
AGTGGGGATGCTTCAAATTT+AGG 0.148811 3.2:+68490933 MS.gene29378:CDS
CTGGGTAAGTTTATAGGTTT+TGG 0.193190 3.2:-68483575 None:intergenic
AAATAGCATGCCTAGTATTC+TGG 0.229962 3.2:-68490284 None:intergenic
GAGGAGTGGGGTCGGCCTTT+TGG 0.232899 3.2:-68490993 None:intergenic
CTATTAGCCTGCAAGCTTCT+TGG 0.237121 3.2:-68489961 None:intergenic
GGAACATGAAGACAGATTTA+AGG 0.238106 3.2:+68488186 MS.gene29378:CDS
AATACTAGGCATGCTATTTC+AGG 0.238889 3.2:+68490288 MS.gene29378:CDS
ATAACCATCAACGTGATATT+TGG 0.242985 3.2:+68487553 MS.gene29378:CDS
CTCTGACTGGGTAAGTTTAT+AGG 0.244033 3.2:-68483581 None:intergenic
GGAAATTGTGGACGATAAAA+TGG 0.252225 3.2:-68487636 None:intergenic
CCTGGCCATTTCTCTATTCC+AGG 0.254087 3.2:-68487465 None:intergenic
GCTTGTGGAGTGGGTGCTTT+TGG 0.256761 3.2:+68488575 MS.gene29378:CDS
CAAGAAGCATTTCAACCTTC+TGG 0.256973 3.2:+68489253 MS.gene29378:CDS
TGTTTAGGGGTACCCTTGGC+TGG 0.257970 3.2:+68483835 MS.gene29378:intron
TAATATTGCATCAAGGAAAT+TGG 0.268118 3.2:+68488319 MS.gene29378:CDS
CACGGTCATGCCACCTCTTC+TGG 0.270053 3.2:-68483534 None:intergenic
TTCTTAAACAACACAACAAC+TGG 0.270776 3.2:+68488054 MS.gene29378:CDS
GTGGGGATGCTTCAAATTTA+GGG 0.272057 3.2:+68490934 MS.gene29378:CDS
TCACGTTGATGGTTATTTAC+TGG 0.275252 3.2:-68487546 None:intergenic
CTCCTCAACACTTTGATGTT+TGG 0.276279 3.2:+68487514 MS.gene29378:CDS
TGCCCTCTTGGACCACTTCC+AGG 0.277401 3.2:-68487696 None:intergenic
TGATGCCACTAACGCTTTAC+AGG 0.278225 3.2:+68489465 MS.gene29378:CDS
ATTATCATTATTAAAGCTTC+TGG 0.279794 3.2:-68488300 None:intergenic
GTCCCTTTCCAAAACGGTTT+TGG 0.280182 3.2:-68491112 None:intergenic
GACATGAATCTCAGGGAAAC+TGG 0.282945 3.2:+68491132 MS.gene29378:CDS
ATGTTGTTTGGTGGTTTAAC+AGG 0.283191 3.2:-68490027 None:intergenic
TCATTGGCAACCCAAATTTC+AGG 0.287011 3.2:+68490761 MS.gene29378:CDS
TTGGGCACTATCTCCACATT+TGG 0.288410 3.2:-68483719 None:intergenic
AGAGGTGGCATGACCGTGTT+AGG 0.292517 3.2:+68483539 MS.gene29378:CDS
TTGTCTCCCAATGCCAATGC+TGG 0.294068 3.2:+68483903 MS.gene29378:CDS
GCTCATGTTAATGTTTCTTC+TGG 0.301351 3.2:+68489613 MS.gene29378:CDS
CATCATGAGTATCAAACTAA+TGG 0.307257 3.2:+68491233 MS.gene29378:CDS
ACTGTGTGATTCTCAACTTT+TGG 0.308385 3.2:-68489589 None:intergenic
TCTGGTGCTTTCAAGTGATT+TGG 0.308767 3.2:-68488282 None:intergenic
CCATTATTATGCTGCCCTCT+TGG 0.309354 3.2:-68487708 None:intergenic
TTCAACTTCTGGTAGTGATA+TGG 0.311024 3.2:+68483986 MS.gene29378:CDS
AATGGAAACCAAAACCGTTT+TGG 0.312755 3.2:+68491104 MS.gene29378:CDS
TCCAAGATCTCTATGTTGTT+TGG 0.316294 3.2:-68490039 None:intergenic
CTTGAGTTCCTATTATAAAC+AGG 0.318285 3.2:-68487903 None:intergenic
GTGCCCTTCTGTCGTCTAAA+AGG 0.318479 3.2:-68490594 None:intergenic
ATTCGACCAGACTCTTCTTC+TGG 0.323742 3.2:+68487161 MS.gene29378:CDS
TCATGATGATTATGAAAGTT+TGG 0.329560 3.2:-68491218 None:intergenic
CTGTAGGGTCCGACAGTATC+AGG 0.342096 3.2:-68488026 None:intergenic
TAGGATGCCAAGAAGCTTGC+AGG 0.342294 3.2:+68489954 MS.gene29378:CDS
CTGGAGCCCCTGTTTATAAT+AGG 0.344430 3.2:+68487895 MS.gene29378:CDS
CCCTTTGCATTATCATGAAC+AGG 0.349592 3.2:-68487384 None:intergenic
ATAATAATGGAGAACTTTAC+AGG 0.356103 3.2:+68487721 MS.gene29378:CDS
ATCATAACCAACCTGGTAAC+CGG 0.357670 3.2:+68491183 MS.gene29378:CDS
CGTCCACAATTTCCACCTAA+TGG 0.361781 3.2:+68487645 MS.gene29378:CDS
CCAAGAGGGCAGCATAATAA+TGG 0.364327 3.2:+68487708 MS.gene29378:CDS
AACGAGTCCTCGCAGTTTGT+TGG 0.366340 3.2:-68488092 None:intergenic
TCCAGGAGAATGATCATATT+AGG 0.368004 3.2:+68488165 MS.gene29378:CDS
ATGAATCATTTGTCGATATG+AGG 0.368859 3.2:+68488123 MS.gene29378:CDS
AGTTTGGACCTTGTCTTTCC+CGG 0.370746 3.2:-68491202 None:intergenic
ATGAGCCGACTCCTTTCTCT+TGG 0.374903 3.2:-68490814 None:intergenic
CTAATAATCCGAGAGGTAAC+AGG 0.377463 3.2:+68490790 MS.gene29378:CDS
ACCTGCCTCTCCCTGCCATC+TGG 0.378544 3.2:-68490570 None:intergenic
TTGACTTCTCCGGAACTGAT+TGG 0.380467 3.2:-68490908 None:intergenic
TCTCGGCCTTCATCAGCATC+GGG 0.383352 3.2:+68484047 MS.gene29378:CDS
CTCAGTGCCCGTCCATCATC+TGG 0.384063 3.2:+68483945 MS.gene29378:CDS
CTAGTCTCTCTTACAGTCCC+TGG 0.385828 3.2:-68490960 None:intergenic
CCAGGTCTCAATGGCATACC+TGG 0.389763 3.2:-68487774 None:intergenic
CGATCGTGATGTCCCTTTCA+TGG 0.389836 3.2:+68487863 MS.gene29378:CDS
ATCTGGTTTACTAGTGTCAT+TGG 0.390075 3.2:-68490553 None:intergenic
ACCTGCTGATCACTCTTTGC+AGG 0.390582 3.2:-68490099 None:intergenic
GGCACGCGACCTTCAACTTC+TGG 0.393419 3.2:+68483975 MS.gene29378:CDS
GCCTGAAGATGGTAATTATC+AGG 0.393696 3.2:+68491295 MS.gene29378:CDS
CCTTGTCTTTCCCGGTTACC+AGG 0.393860 3.2:-68491194 None:intergenic
GAGGAATATTATGATAAGTC+TGG 0.394075 3.2:-68487494 None:intergenic
ACCAAACAACATAGAGATCT+TGG 0.396273 3.2:+68490038 MS.gene29378:CDS
CTCTCTGATTCAAAAGATAG+AGG 0.397321 3.2:+68488400 MS.gene29378:CDS
GGTGGATTGGTGAGACCATT+AGG 0.400195 3.2:-68487660 None:intergenic
CTCTCGGCCTTCATCAGCAT+CGG 0.400899 3.2:+68484046 MS.gene29378:CDS
ACCTCCGAGCCAATCAGTTC+CGG 0.401321 3.2:+68490899 MS.gene29378:CDS
CATCAGCAACGTCCATCATC+TGG 0.401846 3.2:+68491071 MS.gene29378:CDS
GATGGTTGGCGAAAGAAGTC+TGG 0.403132 3.2:+68488795 MS.gene29378:CDS
GTTTCTTCTGGCATTGCTGC+TGG 0.407691 3.2:+68489625 MS.gene29378:CDS
AAAGAATAAGAGGGCTGAAA+TGG 0.408976 3.2:+68490131 MS.gene29378:CDS
TGGGCACTATCTCCACATTT+GGG 0.409277 3.2:-68483718 None:intergenic
AGGGTGAAGCTATAAATTCT+TGG 0.411129 3.2:+68487403 MS.gene29378:CDS
TGCATAGTTTAAAGAATAAG+AGG 0.411313 3.2:+68490121 MS.gene29378:CDS
GCCTGATAATTACCATCTTC+AGG 0.411781 3.2:-68491296 None:intergenic
TGGTTCAGAGGTCCACCTAA+TGG 0.411843 3.2:+68487573 MS.gene29378:CDS
TCCAGTACTTTGACTTTCCA+TGG 0.415783 3.2:-68490724 None:intergenic
CCTTTCATGGGAATGGCAGC+TGG 0.416651 3.2:+68487876 MS.gene29378:CDS
AAAAGACTTCGAATTAGATC+AGG 0.419312 3.2:+68489855 MS.gene29378:CDS
TCCTAATATGATCATTCTCC+TGG 0.419843 3.2:-68488166 None:intergenic
TCATCTGGAGGACGCAGAAA+TGG 0.422089 3.2:+68491086 MS.gene29378:CDS
TCAGTGGCAAGGGTTGTATC+AGG 0.423497 3.2:-68488536 None:intergenic
AACCGTAGAAGTTGAATTCA+TGG 0.424528 3.2:-68489686 None:intergenic
GGAGCAAAAGGAGGACCATT+AGG 0.425539 3.2:-68487588 None:intergenic
CTCTTGGGCCTGTTACCTCT+CGG 0.426632 3.2:-68490798 None:intergenic
CCGACCCCACTCCTCGAATC+AGG 0.426642 3.2:+68491001 MS.gene29378:CDS
GGCAATTCACATGGTAGATC+TGG 0.426685 3.2:+68487945 MS.gene29378:CDS
AAGGTTAGAAAATCATGGTC+TGG 0.426736 3.2:+68483694 MS.gene29378:intron
CTGATACTGTCGGACCCTAC+AGG 0.427199 3.2:+68488027 MS.gene29378:CDS
ATCATGAGTATCAAACTAAT+GGG 0.427498 3.2:+68491234 MS.gene29378:CDS
GGAAATCCACCTGGAGCAAA+AGG 0.427693 3.2:-68487600 None:intergenic
ATGCTTCTTGCTTATTCTGT+AGG 0.427729 3.2:-68489240 None:intergenic
ATAGAAAATGAAGAACCTTA+TGG 0.428344 3.2:+68489895 MS.gene29378:CDS
GCTAAAAGTCTAGTGAAGTT+AGG 0.429286 3.2:+68489151 MS.gene29378:CDS
ATAGATTCTTCAACTTCATC+AGG 0.431156 3.2:+68488822 MS.gene29378:CDS
ATGGCCTATGAAGGCTACTA+TGG 0.431469 3.2:+68487813 MS.gene29378:CDS
TGAACCAAATATCACGTTGA+TGG 0.432459 3.2:-68487557 None:intergenic
TGTCTCCCAATGCCAATGCT+GGG 0.437420 3.2:+68483904 MS.gene29378:CDS
GTTGAGGCCTACGAAAGGTC+TGG 0.439191 3.2:+68488894 MS.gene29378:CDS
ATGGAGATAGCAGGCAGAGT+AGG 0.440889 3.2:+68490346 MS.gene29378:CDS
ACCCATGAATTCAACTTCTA+CGG 0.441479 3.2:+68489684 MS.gene29378:CDS
TGGAAAGGGACATGAATCTC+AGG 0.441828 3.2:+68491124 MS.gene29378:CDS
AAAACCTGTTGCAAAAGAAA+TGG 0.442456 3.2:+68490167 MS.gene29378:CDS
AATAGCATGCCTAGTATTCT+GGG 0.443634 3.2:-68490283 None:intergenic
ACCAGATGGCAGGGAGAGGC+AGG 0.444147 3.2:+68490569 MS.gene29378:CDS
GTTTAGGGGTACCCTTGGCT+GGG 0.444160 3.2:+68483836 MS.gene29378:intron
AAAACTCAATGGCATGGAAT+GGG 0.447197 3.2:+68484174 MS.gene29378:CDS
TTAGTTGATGCCTGAAATTT+GGG 0.449936 3.2:-68490771 None:intergenic
CAGGCAGAGTAGGGCTTGGA+AGG 0.450662 3.2:+68490356 MS.gene29378:CDS
GTCTTTCCCGGTTACCAGGT+TGG 0.451547 3.2:-68491190 None:intergenic
GATTTATTGTGATTCAGAAC+AGG 0.452835 3.2:-68489412 None:intergenic
AAGATCTCTATGTTGTTTGG+TGG 0.455418 3.2:-68490036 None:intergenic
GAGAATGCTGTGATTTCAAC+TGG 0.456096 3.2:-68489930 None:intergenic
GCTTCAAATTTAGGGAATCC+AGG 0.456760 3.2:+68490942 MS.gene29378:CDS
TGTGTTGAAAGAGTTGATTC+TGG 0.456982 3.2:+68490249 MS.gene29378:CDS
GAACCTTATGGTAGAATGAA+TGG 0.459285 3.2:+68489907 MS.gene29378:CDS
ATGAACCTGTAAAGCGTTAG+TGG 0.460060 3.2:-68489470 None:intergenic
ACTCTCCTTCGCGCCCTACT+TGG 0.460914 3.2:-68488926 None:intergenic
AGGCATGCTATTTCAGGTGT+TGG 0.461120 3.2:+68490294 MS.gene29378:CDS
CCACCTCAAGTTCCTCCTCC+TGG 0.461272 3.2:+68487678 MS.gene29378:CDS
TCCCCACTCTTTGACTTCTC+CGG 0.462580 3.2:-68490918 None:intergenic
GAGATCGTATTTCATCTCAT+TGG 0.463593 3.2:+68490745 MS.gene29378:CDS
CCTGGCCCAATGGCCTATGA+AGG 0.464222 3.2:+68487804 MS.gene29378:CDS
AGCTACCTGATTCGAGGAGT+GGG 0.464803 3.2:-68491006 None:intergenic
GAAGCTTCTTCTCAAACATC+GGG 0.465110 3.2:+68488230 MS.gene29378:CDS
TAAAATGGAAATGGTTCCAT+TGG 0.466139 3.2:-68487621 None:intergenic
TGTGGACGATAAAATGGAAA+TGG 0.466569 3.2:-68487630 None:intergenic
TAAGCAACGGCAGGAGGAAG+AGG 0.466778 3.2:+68489105 MS.gene29378:CDS
TGGCCATTCATTCTACCATA+AGG 0.467361 3.2:-68489910 None:intergenic
GTATTGTTTAGGGGTACCCT+TGG 0.467501 3.2:+68483831 MS.gene29378:intron
GTTATTTCAACCTTCAGCTC+AGG 0.467970 3.2:+68489658 MS.gene29378:CDS
AAAGCCATTGGCCTCAGAAC+CGG 0.469303 3.2:+68487986 MS.gene29378:CDS
GAAAACTCAATGGCATGGAA+TGG 0.469985 3.2:+68484173 MS.gene29378:CDS
AGCTGCTAGCTCAAGTGAGC+TGG 0.470492 3.2:+68491025 MS.gene29378:CDS
CAAGTTCCTCCTCCTGGAAG+TGG 0.474929 3.2:+68487684 MS.gene29378:CDS
GATGCAACTAACATTCTTGT+TGG 0.474929 3.2:+68488855 MS.gene29378:CDS
CGTCCATCATCTGGTGGAAG+TGG 0.477231 3.2:+68483954 MS.gene29378:CDS
TCTCAAACATCGGGAAATCA+AGG 0.478192 3.2:+68488239 MS.gene29378:CDS
CCTTCATAGGCCATTGGGCC+AGG 0.478201 3.2:-68487804 None:intergenic
AACTTCATCAGGTGCACAGT+TGG 0.480064 3.2:+68488833 MS.gene29378:CDS
ATGGAAACAGCATTGAGATC+TGG 0.480298 3.2:-68490705 None:intergenic
AAGGAGTCGGCTCATGCTGC+TGG 0.480752 3.2:+68490822 MS.gene29378:CDS
GCCACCTCTTCTGGTGGAAG+AGG 0.481104 3.2:-68483525 None:intergenic
TGTCTCTAAAGGTGTTTCAC+TGG 0.481855 3.2:-68489368 None:intergenic
TTCGCGCCCTACTTGGCTAT+AGG 0.484834 3.2:-68488919 None:intergenic
TGGAGATAGCAGGCAGAGTA+GGG 0.485334 3.2:+68490347 MS.gene29378:CDS
GAAGATGGTAATTATCAGGC+TGG 0.485767 3.2:+68491299 MS.gene29378:CDS
TGCTCCAGGTGGATTTCCAA+TGG 0.486488 3.2:+68487605 MS.gene29378:CDS
TTTAGACGACAGAAGGGCAC+TGG 0.486666 3.2:+68490597 MS.gene29378:CDS
CCTGGAGGAATGTAAGCATC+AGG 0.487512 3.2:-68487756 None:intergenic
GATCGTGATGTCCCTTTCAT+GGG 0.487830 3.2:+68487864 MS.gene29378:CDS
ATTCATGTCCCTTTCCAAAA+CGG 0.488100 3.2:-68491118 None:intergenic
AGGTAACAGGCCCAAGAGAA+AGG 0.489412 3.2:+68490803 MS.gene29378:CDS
ATAGCAGGCAGAGTAGGGCT+TGG 0.490361 3.2:+68490352 MS.gene29378:CDS
ATCTTCTGCATCAAATGCAT+GGG 0.491797 3.2:+68483872 MS.gene29378:CDS
AGGAGGAACTTGAGGTGGAT+TGG 0.492300 3.2:-68487673 None:intergenic
CTAGCCCCAGCATTGGCATT+GGG 0.492394 3.2:-68483909 None:intergenic
TGCAATTGCTGACGCTCCAT+TGG 0.493806 3.2:-68490489 None:intergenic
AATGAGGGTGGTATGAGGCC+TGG 0.494373 3.2:+68487447 MS.gene29378:CDS
GAATCAGAGAGGAATCTTGA+GGG 0.494448 3.2:-68488388 None:intergenic
GGCTACTATGGTCCTCCAAT+GGG 0.494600 3.2:+68487825 MS.gene29378:CDS
CTTTCAACACAGTCATCTGC+TGG 0.494638 3.2:-68490237 None:intergenic
TGAGCTGGCTCCACCAGGTA+TGG 0.494829 3.2:+68491040 MS.gene29378:CDS
AGAAGCTTCTTCTCAAACAT+CGG 0.494962 3.2:+68488229 MS.gene29378:CDS
CCTGGACAGACATTGTCACT+TGG 0.495233 3.2:-68488148 None:intergenic
ATGTAAGCATCAGGCATATG+AGG 0.495970 3.2:-68487747 None:intergenic
GCATTCTTTACTGTCTCTAA+AGG 0.496034 3.2:-68489379 None:intergenic
AGTAGCCTTCATAGGCCATT+GGG 0.496499 3.2:-68487809 None:intergenic
ACCAGAAAAGGAAGAATAGC+AGG 0.497555 3.2:+68489722 MS.gene29378:CDS
TAATGACAATGATGCCTGTC+AGG 0.497817 3.2:+68489300 MS.gene29378:CDS
GATGGTCAAGACAATGAGTC+TGG 0.498563 3.2:+68490861 MS.gene29378:CDS
CCAGGTATGCCATTGAGACC+TGG 0.499396 3.2:+68487774 MS.gene29378:CDS
CCTGGAATAGAGAAATGGCC+AGG 0.500011 3.2:+68487465 MS.gene29378:CDS
ATTCAGAACAGGTTCTTTGT+CGG 0.501779 3.2:-68489401 None:intergenic
AGTCGCCTGTAAACCAGAAA+AGG 0.502200 3.2:+68489710 MS.gene29378:CDS
TGAGCCGACTCCTTTCTCTT+GGG 0.503340 3.2:-68490813 None:intergenic
TGCTTCTTGCTTATTCTGTA+GGG 0.503782 3.2:-68489239 None:intergenic
AGGTGTTTCACTGGACAAGA+TGG 0.507167 3.2:-68489359 None:intergenic
CGAAGTCCAGAAGAAGAGTC+TGG 0.507692 3.2:-68487167 None:intergenic
AGAAATCAAATACCTCTGAC+TGG 0.508493 3.2:-68483594 None:intergenic
CGCAGTGCTGAAACAAGACT+TGG 0.511241 3.2:+68484113 MS.gene29378:CDS
TTTAGTAGATGAATTATCCC+TGG 0.511591 3.2:-68488438 None:intergenic
TAATTCATCTACTAAAAGTA+AGG 0.514728 3.2:+68488445 MS.gene29378:CDS
TGATGTCCCTTTCATGGGAA+TGG 0.515048 3.2:+68487869 MS.gene29378:CDS
TTTCTGCGTCCTCCAGATGA+TGG 0.515478 3.2:-68491083 None:intergenic
ATGATTTACTGCCCCAGCCA+AGG 0.515840 3.2:-68483848 None:intergenic
GGCGGCCCCGATGCTGATGA+AGG 0.519684 3.2:-68484053 None:intergenic
TCCTGCAAAGAGTGATCAGC+AGG 0.519976 3.2:+68490098 MS.gene29378:CDS
TACTCTGAACGGCCTGAAGA+TGG 0.520179 3.2:+68491284 MS.gene29378:CDS
CACATGGATCATGGCGGCAA+AGG 0.520743 3.2:+68490385 MS.gene29378:CDS
ATCTCGATTTGCTGAACACG+TGG 0.521263 3.2:+68484148 MS.gene29378:CDS
AGGGTTTAAATGCAAAAGCC+AGG 0.521887 3.2:+68488420 MS.gene29378:CDS
GAGGCCAATGGCTTTACCGC+AGG 0.523471 3.2:-68487978 None:intergenic
CCAAGTGACAATGTCTGTCC+AGG 0.525310 3.2:+68488148 MS.gene29378:CDS
ACTAGCCCCAGCATTGGCAT+TGG 0.526062 3.2:-68483910 None:intergenic
TTTAGGGGTACCCTTGGCTG+GGG 0.526719 3.2:+68483837 MS.gene29378:intron
CATCTTCTGCATCAAATGCA+TGG 0.527611 3.2:+68483871 MS.gene29378:CDS
AACTAACTACTACTAGTGCA+TGG 0.528299 3.2:+68484015 MS.gene29378:CDS
AGTCAGAATCCACATGAGCC+TGG 0.528950 3.2:+68487924 MS.gene29378:CDS
TCCATGGAAAGTCAAAGTAC+TGG 0.529015 3.2:+68490723 MS.gene29378:CDS
AGGGAAAAGCACATGGATCA+TGG 0.529641 3.2:+68490376 MS.gene29378:CDS
TCCTACTCTTGGTTCTGAGA+AGG 0.530069 3.2:+68486378 MS.gene29378:CDS
AGGAGAGTCTATGCAAAACT+TGG 0.530163 3.2:+68488941 MS.gene29378:CDS
TGAATCAGAGAGGAATCTTG+AGG 0.530601 3.2:-68488389 None:intergenic
AACAACACAACAACTGGGAT+GGG 0.530727 3.2:+68488060 MS.gene29378:CDS
CCAGCTGCCATTCCCATGAA+AGG 0.531070 3.2:-68487876 None:intergenic
TTGAGGCCTACGAAAGGTCT+GGG 0.531348 3.2:+68488895 MS.gene29378:CDS
TGAGGCCTGGAATAGAGAAA+TGG 0.531639 3.2:+68487460 MS.gene29378:CDS
GAATTACAATAGCCCATTGG+AGG 0.531661 3.2:-68487837 None:intergenic
AAGCGCACACAAGCCGTGGA+AGG 0.531852 3.2:+68489184 MS.gene29378:CDS
ACTAGAAATGCTCCACCAAA+AGG 0.532886 3.2:+68490978 MS.gene29378:CDS
AAACAACACAACAACTGGGA+TGG 0.533283 3.2:+68488059 MS.gene29378:CDS
TGATAAGTCTGGAGATTCCC+TGG 0.533432 3.2:-68487483 None:intergenic
GCTAGCAGCTACCTGATTCG+AGG 0.533845 3.2:-68491012 None:intergenic
AGATCTCAATGCTGTTTCCA+TGG 0.533910 3.2:+68490707 MS.gene29378:CDS
ATCCACAGGCATATTTCTCA+TGG 0.535432 3.2:+68488720 MS.gene29378:intron
AGGCTACTATGGTCCTCCAA+TGG 0.535580 3.2:+68487824 MS.gene29378:CDS
TAGTAGCCTTCATAGGCCAT+TGG 0.535882 3.2:-68487810 None:intergenic
ATGGTTGGCGAAAGAAGTCT+GGG 0.536008 3.2:+68488796 MS.gene29378:CDS
ACTTCCTTTGCAGTTGCTGA+TGG 0.537081 3.2:-68489796 None:intergenic
TGACAGGCATCATTGTCATT+AGG 0.537472 3.2:-68489298 None:intergenic
TGCTAATAATACAAAAGAGT+TGG 0.538542 3.2:+68489069 MS.gene29378:CDS
CCGTTGCTTAGTCTGTTGCT+TGG 0.541237 3.2:-68489092 None:intergenic
ATGATCGTGTCGCGACAACC+AGG 0.542042 3.2:+68483191 MS.gene29378:CDS
GCGGAAAATGAAGGCAGTGC+TGG 0.542248 3.2:+68488503 MS.gene29378:CDS
TGATCCTGCGGTAAAGCCAT+TGG 0.542434 3.2:+68487974 MS.gene29378:CDS
GATCTACCATGTGAATTGCC+AGG 0.543047 3.2:-68487942 None:intergenic
AGGACCATAGTAGCCTTCAT+AGG 0.543070 3.2:-68487817 None:intergenic
ACACTAGTAAACCAGATGGC+AGG 0.543529 3.2:+68490559 MS.gene29378:CDS
ACCGTAGAAGTTGAATTCAT+GGG 0.544545 3.2:-68489685 None:intergenic
TTTGAATTACAATAGCCCAT+TGG 0.545286 3.2:-68487840 None:intergenic
TTCTCCGGAACTGATTGGCT+CGG 0.545589 3.2:-68490903 None:intergenic
TTTCTGTGTTGACCCTTCCA+CGG 0.546716 3.2:-68489197 None:intergenic
AGGCAGAGGCAATCATCGTA+AGG 0.546920 3.2:+68488749 MS.gene29378:CDS
TCTCTGATTCAAAAGATAGA+GGG 0.548199 3.2:+68488401 MS.gene29378:CDS
TTAGACGACAGAAGGGCACT+GGG 0.548852 3.2:+68490598 MS.gene29378:CDS
CAACGTGATATTTGGTTCAG+AGG 0.549089 3.2:+68487561 MS.gene29378:CDS
CATGGGTAAGCCTGAGCTGA+AGG 0.549316 3.2:-68489668 None:intergenic
TGTGAAGTCTGATTTGATGT+TGG 0.549617 3.2:-68484074 None:intergenic
CCTGATGCTTACATTCCTCC+AGG 0.549986 3.2:+68487756 MS.gene29378:CDS
TCAGTGGAACAGCCACATCC+AGG 0.550720 3.2:+68488627 MS.gene29378:CDS
GAAGTCTGATTTGATGTTGG+CGG 0.551718 3.2:-68484071 None:intergenic
AGAGTTGATTCTGGTCCTCA+TGG 0.552090 3.2:+68490258 MS.gene29378:CDS
CAGCTGCCATTCCCATGAAA+GGG 0.552135 3.2:-68487875 None:intergenic
AAGATGGTAATTATCAGGCT+GGG 0.552514 3.2:+68491300 MS.gene29378:CDS
AATCCAACTGCTTGTGGAGT+GGG 0.552836 3.2:+68488566 MS.gene29378:CDS
GGAAAGGGACATGAATCTCA+GGG 0.553028 3.2:+68491125 MS.gene29378:CDS
TTTCCGCATGGCTATCAGGA+TGG 0.553411 3.2:-68488487 None:intergenic
CACTTCCACCAGATGATGGA+CGG 0.554701 3.2:-68483953 None:intergenic
ACTAACTACTACTAGTGCAT+GGG 0.555305 3.2:+68484016 MS.gene29378:CDS
ACATGAATCTCAGGGAAACT+GGG 0.556261 3.2:+68491133 MS.gene29378:CDS
TCAAGTGAGCTGGCTCCACC+AGG 0.556406 3.2:+68491035 MS.gene29378:CDS
ACTTCCACCAGATGATGGAC+GGG 0.556557 3.2:-68483952 None:intergenic
TCTGGGTCCTATAGCCAAGT+AGG 0.557081 3.2:+68488912 MS.gene29378:CDS
CAGACTCTTCTTCTGGACTT+CGG 0.558646 3.2:+68487168 MS.gene29378:CDS
GATAGCCATGCGGAAAATGA+AGG 0.559249 3.2:+68488494 MS.gene29378:CDS
GGTAATGCAGCCACGGACAA+AGG 0.559719 3.2:-68489775 None:intergenic
TCATAACCAACCTGGTAACC+GGG 0.559941 3.2:+68491184 MS.gene29378:CDS
AGAGAGGAATCTTGAGGGGA+GGG 0.560284 3.2:-68488383 None:intergenic
CTGAAACAAGCTTGTTGAGA+GGG 0.561866 3.2:+68490517 MS.gene29378:CDS
TCAAAATATTCAGATACCAA+TGG 0.561911 3.2:+68490473 MS.gene29378:CDS
TGAATCATTTGTCGATATGA+GGG 0.563817 3.2:+68488124 MS.gene29378:CDS
ACATCAAGGCAGAAAAGAGC+GGG 0.564329 3.2:+68489502 MS.gene29378:CDS
TGGACGGGCACTGAGATGAC+TGG 0.565820 3.2:-68483937 None:intergenic
ACCTCTTCCACCAGAAGAGG+TGG 0.566097 3.2:+68483524 MS.gene29378:CDS
TGCTGGAACTTGACTTATCG+AGG 0.566522 3.2:-68490220 None:intergenic
CTACTAAAAGTAAGGAGGAG+AGG 0.568658 3.2:+68488453 MS.gene29378:CDS
TTGTTTAAGAAGAACCCTGT+AGG 0.569932 3.2:-68488042 None:intergenic
ACTCACTCGAGACGAGGTGG+TGG 0.571183 3.2:+68491347 MS.gene29378:CDS
GTAAACCAGATGGCAGGGAG+AGG 0.571567 3.2:+68490565 MS.gene29378:CDS
GTTGGCATCACTGACCTGAC+AGG 0.571773 3.2:-68489314 None:intergenic
TCCGGAACTGATTGGCTCGG+AGG 0.572627 3.2:-68490900 None:intergenic
TTCATAACAATGTCACATCA+AGG 0.573890 3.2:+68489488 MS.gene29378:CDS
TTAAGGAGGACAAGTGCTCA+TGG 0.574799 3.2:+68488203 MS.gene29378:CDS
CACTAGTAAACCAGATGGCA+GGG 0.575223 3.2:+68490560 MS.gene29378:CDS
AGATGGTAATTATCAGGCTG+GGG 0.576215 3.2:+68491301 MS.gene29378:CDS
GCAACGGCAGGAGGAAGAGG+TGG 0.576294 3.2:+68489108 MS.gene29378:CDS
GCAAGGAAGTTTACAACAAG+TGG 0.576463 3.2:+68490194 MS.gene29378:CDS
CAAACTAATGGGCCACATGT+TGG 0.576488 3.2:+68491245 MS.gene29378:CDS
TTCCGGAGAAGTCAAAGAGT+GGG 0.577239 3.2:+68490916 MS.gene29378:CDS
CATATTTCTCATGGCATGCA+AGG 0.577386 3.2:+68488729 MS.gene29378:CDS
TTCAGCTGATAACCATGCAC+AGG 0.578081 3.2:+68488968 MS.gene29378:CDS
ATAATGATAATATTGCATCA+AGG 0.578745 3.2:+68488312 MS.gene29378:CDS
ATATCACTACCAGAAGTTGA+AGG 0.579722 3.2:-68483984 None:intergenic
AACTACAACTTTCCCTAACA+CGG 0.580839 3.2:-68483552 None:intergenic
AGCGCACACAAGCCGTGGAA+GGG 0.580986 3.2:+68489185 MS.gene29378:CDS
TGTGAATTGCCAGGCTCATG+TGG 0.581069 3.2:-68487933 None:intergenic
AAACAAGCGCACACAAGCCG+TGG 0.581233 3.2:+68489180 MS.gene29378:CDS
GTGCATGGGGTTCAAGCTCT+CGG 0.582234 3.2:+68484030 MS.gene29378:CDS
GCACCCACTCCACAAGCAGT+TGG 0.583153 3.2:-68488569 None:intergenic
CATCAAAACATCACACCCAT+GGG 0.584318 3.2:-68489998 None:intergenic
ACATCAAAACATCACACCCA+TGG 0.584365 3.2:-68489999 None:intergenic
TGCTGATGGTAATGCAGCCA+CGG 0.584461 3.2:-68489782 None:intergenic
ACAGACTAAGCAACGGCAGG+AGG 0.584531 3.2:+68489099 MS.gene29378:CDS
TGATTTACTGCCCCAGCCAA+GGG 0.584599 3.2:-68483847 None:intergenic
GCAACAGACTAAGCAACGGC+AGG 0.586373 3.2:+68489096 MS.gene29378:CDS
CAGCTACCTGATTCGAGGAG+TGG 0.586406 3.2:-68491007 None:intergenic
ACATACTTGAAGTCATAGCC+TGG 0.586520 3.2:-68483209 None:intergenic
GGTGTTTCACTGGACAAGAT+GGG 0.586591 3.2:-68489358 None:intergenic
TCTCATGGCATGCAAGGCAG+AGG 0.586841 3.2:+68488735 MS.gene29378:CDS
GAGGTGGCATGACCGTGTTA+GGG 0.587164 3.2:+68483540 MS.gene29378:CDS
GATGAAGCGGCTGCTCCAGA+AGG 0.587254 3.2:-68489268 None:intergenic
TGATACTGTCGGACCCTACA+GGG 0.587261 3.2:+68488028 MS.gene29378:CDS
AGACCATTAGGTGGAAATTG+TGG 0.587284 3.2:-68487648 None:intergenic
CTTCAAATTTAGGGAATCCA+GGG 0.587907 3.2:+68490943 MS.gene29378:CDS
GTCTCCCAATGCCAATGCTG+GGG 0.589497 3.2:+68483905 MS.gene29378:CDS
GCTCGATTCTACCGGTTCTG+AGG 0.589917 3.2:-68487997 None:intergenic
CTAAAAGTAAGGAGGAGAGG+AGG 0.590076 3.2:+68488456 MS.gene29378:CDS
ACACGTGGGTGAAAACTCAA+TGG 0.590639 3.2:+68484163 MS.gene29378:CDS
GTGCCACTTCCACCAGATGA+TGG 0.592442 3.2:-68483957 None:intergenic
AGGCAGAGTAGGGCTTGGAA+GGG 0.593584 3.2:+68490357 MS.gene29378:CDS
GGGTTTAAATGCAAAAGCCA+GGG 0.593810 3.2:+68488421 MS.gene29378:CDS
CCTGATTCGAGGAGTGGGGT+CGG 0.594543 3.2:-68491001 None:intergenic
CTTGGACCACTTCCAGGAGG+AGG 0.596704 3.2:-68487690 None:intergenic
GGAGTGTGGCTCGATTCTAC+CGG 0.596810 3.2:-68488005 None:intergenic
CGCCAAACATCAAAGTGTTG+AGG 0.597591 3.2:-68487516 None:intergenic
CATCAGCATAATTAACATTG+TGG 0.597941 3.2:-68489447 None:intergenic
AGTGCCCGTCCATCATCTGG+TGG 0.598642 3.2:+68483948 MS.gene29378:CDS
TGGGTGAAAACTCAATGGCA+TGG 0.598846 3.2:+68484168 MS.gene29378:CDS
TGTTTAAGAAGAACCCTGTA+GGG 0.599761 3.2:-68488041 None:intergenic
CTTGATACTCAAGATGCTGA+TGG 0.600154 3.2:+68488777 MS.gene29378:CDS
GGCAGGAGGAAGAGGTGGAG+CGG 0.600478 3.2:+68489113 MS.gene29378:CDS
AAACAACTGCGCAAGATGAG+TGG 0.600667 3.2:+68491156 MS.gene29378:CDS
CCAGGAGGAGGAACTTGAGG+TGG 0.601386 3.2:-68487678 None:intergenic
CTTCCAGGAGGAGGAACTTG+AGG 0.602424 3.2:-68487681 None:intergenic
CAGAGAGGAATCTTGAGGGG+AGG 0.603169 3.2:-68488384 None:intergenic
CATGAGCCTGGCAATTCACA+TGG 0.603600 3.2:+68487936 MS.gene29378:CDS
TCATGGTCTGGACCCAAATG+TGG 0.604653 3.2:+68483706 MS.gene29378:CDS
CTGGGTCCTATAGCCAAGTA+GGG 0.605683 3.2:+68488913 MS.gene29378:CDS
GAGTCGGCTCATGCTGCTGG+TGG 0.605893 3.2:+68490825 MS.gene29378:CDS
ATACTCAAGATGCTGATGGT+TGG 0.606814 3.2:+68488781 MS.gene29378:CDS
GGTTCCATTGGAAATCCACC+TGG 0.606918 3.2:-68487609 None:intergenic
CCTGTTCATGATAATGCAAA+GGG 0.608224 3.2:+68487384 MS.gene29378:CDS
TTGACCTCTTCCACCAGAAG+AGG 0.609128 3.2:+68483521 MS.gene29378:CDS
TCTTAAACAACACAACAACT+GGG 0.610233 3.2:+68488055 MS.gene29378:CDS
GGTCATGCCACCTCTTCTGG+TGG 0.610247 3.2:-68483531 None:intergenic
GGGTGAACTAGCCCCAGCAT+TGG 0.613036 3.2:-68483916 None:intergenic
TTCATCTACTAAAAGTAAGG+AGG 0.615201 3.2:+68488448 MS.gene29378:CDS
TCCTGTTCATGATAATGCAA+AGG 0.615412 3.2:+68487383 MS.gene29378:CDS
AGTTGAAGAGCCTTTGTCCG+TGG 0.615826 3.2:+68489765 MS.gene29378:CDS
CTCCTGGAAGTGGTCCAAGA+GGG 0.616431 3.2:+68487694 MS.gene29378:CDS
GAAATCAAATACCTCTGACT+GGG 0.616770 3.2:-68483593 None:intergenic
TTTGAATCATCATCAGTCAG+TGG 0.619002 3.2:+68488611 MS.gene29378:CDS
AATTCACATGGTAGATCTGG+TGG 0.619355 3.2:+68487948 MS.gene29378:CDS
AAAGACTTCGAATTAGATCA+GGG 0.621416 3.2:+68489856 MS.gene29378:CDS
GCTTGGAAGGGAAAAGCACA+TGG 0.622803 3.2:+68490369 MS.gene29378:CDS
ATTAGGCATTACAGATGAAG+CGG 0.624233 3.2:-68489281 None:intergenic
GTTCCGGAGAAGTCAAAGAG+TGG 0.624964 3.2:+68490915 MS.gene29378:CDS
ATTGCATCAAGGAAATTGGA+TGG 0.625316 3.2:+68488323 MS.gene29378:CDS
CAACACTTTGATGTTTGGCG+TGG 0.625657 3.2:+68487519 MS.gene29378:CDS
TCTACCGGTTCTGAGGCCAA+TGG 0.626505 3.2:-68487990 None:intergenic
AATCAGAGAGGAATCTTGAG+GGG 0.626962 3.2:-68488387 None:intergenic
ATAATTAACATTGTGGAACA+AGG 0.627688 3.2:-68489440 None:intergenic
GGCAAGAACTACAGAGACAC+TGG 0.628697 3.2:+68484196 MS.gene29378:CDS
GATATGCATGACATGCAAGA+TGG 0.628903 3.2:+68490426 MS.gene29378:CDS
AAACTCAATGGCATGGAATG+GGG 0.629912 3.2:+68484175 MS.gene29378:CDS
TGATGCCTAAAATCCATACC+TGG 0.632685 3.2:-68491053 None:intergenic
GGCAGAGGCAATCATCGTAA+GGG 0.632688 3.2:+68488750 MS.gene29378:CDS
CAGGCCCAAGAGAAAGGAGT+CGG 0.633371 3.2:+68490809 MS.gene29378:CDS
TATAGCCAAGTAGGGCGCGA+AGG 0.636685 3.2:+68488921 MS.gene29378:CDS
TTGAGTTCCTATTATAAACA+GGG 0.636908 3.2:-68487902 None:intergenic
GCATAGTTTAAAGAATAAGA+GGG 0.637760 3.2:+68490122 MS.gene29378:CDS
GCAAAAGAAATGGCTCAGCA+AGG 0.637798 3.2:+68490177 MS.gene29378:CDS
CTATAAACTTACCCAGTCAG+AGG 0.639030 3.2:+68483582 MS.gene29378:CDS
AAATCCAACTGCTTGTGGAG+TGG 0.639918 3.2:+68488565 MS.gene29378:CDS
GATTTGCTGTCACCAACATG+TGG 0.640436 3.2:-68491257 None:intergenic
CCTGGTAACCGGGAAAGACA+AGG 0.640461 3.2:+68491194 MS.gene29378:CDS
GCAAAAGGAGGACCATTAGG+TGG 0.640604 3.2:-68487585 None:intergenic
ATTACCATCAGCAACTGCAA+AGG 0.641831 3.2:+68489792 MS.gene29378:CDS
CCTCTTGGACCACTTCCAGG+AGG 0.643036 3.2:-68487693 None:intergenic
CTGGAATAGAGAAATGGCCA+GGG 0.643394 3.2:+68487466 MS.gene29378:CDS
TGGCATCATCATAACCAACC+TGG 0.643990 3.2:+68491176 MS.gene29378:CDS
CAAACATCAAAGTGTTGAGG+AGG 0.647371 3.2:-68487513 None:intergenic
CACATCAAGGCAGAAAAGAG+CGG 0.649001 3.2:+68489501 MS.gene29378:CDS
TCTCGATTTGCTGAACACGT+GGG 0.649314 3.2:+68484149 MS.gene29378:CDS
GTCCGACAGTATCAGGAGTG+TGG 0.649787 3.2:-68488019 None:intergenic
TGAGCATCAAATATCTGTTG+AGG 0.650239 3.2:+68488878 MS.gene29378:CDS
CCTCCTGGAAGTGGTCCAAG+AGG 0.650408 3.2:+68487693 MS.gene29378:CDS
GCAAATCAGACTACTCTGAA+CGG 0.651485 3.2:+68491273 MS.gene29378:CDS
GTGTGTGCATTACCTGTGCA+TGG 0.654773 3.2:-68488980 None:intergenic
TGCCTAAAATCCATACCTGG+TGG 0.655507 3.2:-68491050 None:intergenic
TCCTTCTCAGAACCAAGAGT+AGG 0.655929 3.2:-68486379 None:intergenic
TTTGACAGGAATTTGAACCA+TGG 0.656561 3.2:-68490455 None:intergenic
AATCCACCTGGAGCAAAAGG+AGG 0.659596 3.2:-68487597 None:intergenic
ATAGCATGCCTAGTATTCTG+GGG 0.659840 3.2:-68490282 None:intergenic
GCTACCTGATTCGAGGAGTG+GGG 0.660060 3.2:-68491005 None:intergenic
ATCTGGTGGACATGATCCTG+CGG 0.661277 3.2:+68487962 MS.gene29378:CDS
GCTGGAACTTGACTTATCGA+GGG 0.661489 3.2:-68490219 None:intergenic
TAAGCATCAGGCATATGAGG+TGG 0.661899 3.2:-68487744 None:intergenic
GGACGGGCACTGAGATGACT+GGG 0.662894 3.2:-68483936 None:intergenic
TATCTGTTGAGGCCTACGAA+AGG 0.663705 3.2:+68488889 MS.gene29378:CDS
TGAAATCACAGCATTCTCGT+AGG 0.664074 3.2:+68489935 MS.gene29378:CDS
AAGTCTAGTGAAGTTAGGCG+AGG 0.664745 3.2:+68489156 MS.gene29378:CDS
AGTCAAACTCACTCGAGACG+AGG 0.665630 3.2:+68491341 MS.gene29378:CDS
ACATGAAGACAGATTTAAGG+AGG 0.668739 3.2:+68488189 MS.gene29378:CDS
TGAGTTCCTATTATAAACAG+GGG 0.669008 3.2:-68487901 None:intergenic
TCCGGAGAAGTCAAAGAGTG+GGG 0.671117 3.2:+68490917 MS.gene29378:CDS
AGCCACACTCCTGATACTGT+CGG 0.673722 3.2:+68488017 MS.gene29378:CDS
GTACATGATGTTGAGTTGCA+AGG 0.674453 3.2:+68486409 MS.gene29378:CDS
CTAACTACTACTAGTGCATG+GGG 0.674745 3.2:+68484017 MS.gene29378:CDS
GATGGTAATTATCAGGCTGG+GGG 0.674766 3.2:+68491302 MS.gene29378:CDS
CTCGGCCTTCATCAGCATCG+GGG 0.681884 3.2:+68484048 MS.gene29378:CDS
TGAAGACGAACCGACAGTTG+AGG 0.682331 3.2:-68487207 None:intergenic
AAGTGAGAAAAGTAAAACTG+AGG 0.684024 3.2:+68490068 MS.gene29378:CDS
TAGCATGCCTAGTATTCTGG+GGG 0.686441 3.2:-68490281 None:intergenic
ATAGGACCCAGACCTTTCGT+AGG 0.686813 3.2:-68488901 None:intergenic
CCAAGCAACAGACTAAGCAA+CGG 0.687021 3.2:+68489092 MS.gene29378:CDS
AATGACACTAGTAAACCAGA+TGG 0.690529 3.2:+68490555 MS.gene29378:CDS
TCTTCTGCATCAAATGCATG+GGG 0.699551 3.2:+68483873 MS.gene29378:CDS
CAAACTCACTCGAGACGAGG+TGG 0.700199 3.2:+68491344 MS.gene29378:CDS
GCATCAACTAATAATCCGAG+AGG 0.704838 3.2:+68490783 MS.gene29378:CDS
GGATTGGTGAGACCATTAGG+TGG 0.705457 3.2:-68487657 None:intergenic
TCTGAAACAAGCTTGTTGAG+AGG 0.705506 3.2:+68490516 MS.gene29378:CDS
AGTCTTGTTTCAGCACTGCG+AGG 0.706108 3.2:-68484110 None:intergenic
GGTCTCAATGGCATACCTGG+AGG 0.707028 3.2:-68487771 None:intergenic
CAGCAACGTCCATCATCTGG+AGG 0.713876 3.2:+68491074 MS.gene29378:CDS
ATGCAAGATGGAGTGAACCA+TGG 0.722004 3.2:+68490438 MS.gene29378:CDS
AAACGAGCCAACAAACTGCG+AGG 0.733058 3.2:+68488085 MS.gene29378:CDS
GAAAAGCACATGGATCATGG+CGG 0.754211 3.2:+68490379 MS.gene29378:CDS
TAGACGACAGAAGGGCACTG+GGG 0.764117 3.2:+68490599 MS.gene29378:CDS
GTTCCATCCTGATAGCCATG+CGG 0.769782 3.2:+68488484 MS.gene29378:CDS
AAAAGTTGAGAATCACACAG+TGG 0.798638 3.2:+68489591 MS.gene29378:CDS
TGGTTGGCGAAAGAAGTCTG+GGG 0.803184 3.2:+68488797 MS.gene29378:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.2 gene 68483191 68491388 68483191 ID=MS.gene29378
chr3.2 mRNA 68483191 68491388 68483191 ID=MS.gene29378.t1;Parent=MS.gene29378
chr3.2 exon 68483191 68483225 68483191 ID=MS.gene29378.t1.exon1;Parent=MS.gene29378.t1
chr3.2 CDS 68483191 68483225 68483191 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
chr3.2 exon 68483520 68483603 68483520 ID=MS.gene29378.t1.exon2;Parent=MS.gene29378.t1
chr3.2 CDS 68483520 68483603 68483520 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
chr3.2 exon 68483697 68483741 68483697 ID=MS.gene29378.t1.exon3;Parent=MS.gene29378.t1
chr3.2 CDS 68483697 68483741 68483697 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
chr3.2 exon 68483842 68484217 68483842 ID=MS.gene29378.t1.exon4;Parent=MS.gene29378.t1
chr3.2 CDS 68483842 68484217 68483842 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
chr3.2 exon 68486328 68486430 68486328 ID=MS.gene29378.t1.exon5;Parent=MS.gene29378.t1
chr3.2 CDS 68486328 68486430 68486328 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
chr3.2 exon 68487147 68487218 68487147 ID=MS.gene29378.t1.exon6;Parent=MS.gene29378.t1
chr3.2 CDS 68487147 68487218 68487147 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
chr3.2 exon 68487376 68488648 68487376 ID=MS.gene29378.t1.exon7;Parent=MS.gene29378.t1
chr3.2 CDS 68487376 68488648 68487376 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
chr3.2 exon 68488728 68488989 68488728 ID=MS.gene29378.t1.exon8;Parent=MS.gene29378.t1
chr3.2 CDS 68488728 68488989 68488728 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
chr3.2 exon 68489067 68491388 68489067 ID=MS.gene29378.t1.exon9;Parent=MS.gene29378.t1
chr3.2 CDS 68489067 68491388 68489067 ID=cds.MS.gene29378.t1;Parent=MS.gene29378.t1
Gene Sequence

>MS.gene29378

ATGATCGTGTCGCGACAACCAGGCTATGACTTCAAGTATGTTGAGTGGGGATCGAAGGTAATTTTGGAATTGTGTGCATTGGAAGCCCCTAGAATTGGGCTAGTGAGGAGGGATTTGGGTATTCAAAAGCTAATTTGTGCCTTGTTATGCATATCATCTTGTGATACATCCTTGTAGAAAATCAACTGTTTTTATGATCATATGATTCTGATGCTAACCACTAGCTTCCTTAAGCGAGGAGGTTTCAAATTTTCATCCTTCCATTTGCACATAAATGCATTTTTATCAATACACTGAATATATATATTAATGATGATAATACTGCGCAGGTTGACCTCTTCCACCAGAAGAGGTGGCATGACCGTGTTAGGGAAAGTTGTAGTTCCAAAACCTATAAACTTACCCAGTCAGAGGTATTTGATTTCTAGTGCAATTATTTGCCGTCTCAGTTATCTAGTGTTTTTTTTTTCCATGATCTAAACTTGCTTATTTTCTTTTGTTTTAAGGTTAGAAAATCATGGTCTGGACCCAAATGTGGAGATAGTGCCCAAGTGAGTAAATATTCTATTGAGCCGACTAATATATATTTTTCTGCTGCTTTTGTTCCTCTAGATTAGATAATTGATTCTTGTGTTGTCTTGTATTGTTTAGGGGTACCCTTGGCTGGGGCAGTAAATCATCATCTTCTGCATCAAATGCATGGGGTTCTTCTTTGTCTCCCAATGCCAATGCTGGGGCTAGTTCACCCAGTCATCTCAGTGCCCGTCCATCATCTGGTGGAAGTGGCACGCGACCTTCAACTTCTGGTAGTGATATGGCTTCTGAACTAACTACTACTAGTGCATGGGGTTCAAGCTCTCGGCCTTCATCAGCATCGGGGCCGCCAACATCAAATCAGACTTCACAAACATCATTGCGTCCTCGCAGTGCTGAAACAAGACTTGGTAGCTCACACTTATCTCGATTTGCTGAACACGTGGGTGAAAACTCAATGGCATGGAATGGGGCAAGAACTACAGAGACACTGGTAAGCTTCTGTTCTTATTTACGGTTAATCACTTATATGGTGTTAAAAGATCAATAGATTGATTTAATCAATGCTGAAGATGTTGCATCAACAATGACAACAATTGATATGGGGTTTTATTCTCTTGTAGTTAACAAATTTCCATTTTACATCTTCTATCTTTATATGGCTTGGGAATGATACATATCTTGTCAGTGGGCGTAGTTTCTTGGTTAATGAAAGTGTTAGCATATCTAAACAATATCTCATATTAGTATCTTATGATGCATGCGAGTTGTATCTCGATTTGAGACGAATCTCTAGTGTGCATTTTTTTTTTTTTTTTTGTAAAATGAATCTCATCTTGAACACCGATGAATTTGGATTCATTATGATGAACCCCAATTCGTTCTAATGAATCACCACCGCTATATTCATATAATGTCTCTATCCTATCCCGATCATCAAACGGGTCCTAATTACCGCGTATCTTTTTCTATTAATTGCACCATTTTTTTTAATTAAAGTTTGTTGTTGTTAACTATTTTATTCATTCTTTTTGGCTTTTAGTTGATAATTTCTCTGTCGTAACTATGGTATCTTTCTTTTTTAAAAATTGAGGGTTTAAATATTTGTATTAGAAATTACTAGTGTAAAGATTCACTAACATGCCTGTCTATCCGCTTTTCCACTGCGCTTAATTGTATATATTACGATCAGATATGTTTGACAAATAAGATTAAAATGAACTCTTTCAATAGTGTCAAATAGCGTTCCTATTGTAGTGGTGTTGCTCCTATTTTATTGGGGTTTAACTAATTCTTAATTAATAAGTTAAATTCCTATTGTAGTGTTGCTGTTCCTATTTTAATGGGATGTAATCTTTTTTTAATTAATAAGTTAAATAATAAAGTAAAAGGGATACATTTGTAAATGTAATAGTTTAAATGAAGGATAAAATTGGAAGTGAAAAAGTCACTCCAAAATCATGAATCCCCTTTATATATAGTTATAGAAGATTAATTAGGTGTCCATATTATATATAAGGATGGAAGATTAATTAGGTATCCATAATCTTTGACCTATTTAGCTGCAGTCTTGCTGTCAGATGCTCCACACTAATATCTAGATTGGCAACCATGCTTTAGAAAATATTGTGGGAAATGACGGAAAGTGTCCCAACTTCCCAAGACTAATAAGGCAAGGCTCAGCGTCAGAGATTACTAGGGAAACCTTTGTTGGCTTGGCACATACAAATCTGATCTACCATACACTTTTAACATTATAAGCCAATTCAGGCATGACTCTAGGATAAGATCATTTCAGGTTAAGCGTTAGATTCTTAATATCTTAATACCCAACAACCGTGCCAAAAATAAGACTTTTTTTCTTTCCAAATAGTGGAAATTTTGCCATGAAGATCAGTTACTGATTGAAGGTCGGCATCTGGTTGTTATGTTTCTTCTACTTGGAAACTATTAACATGGAAGAGATGCATACTGTAGTTGCTCAGCGTGTAAAAGCTAAATTTTGAGCTATGGTTCCAGGTTGCTGTAACTTGCAAGATATTGTAATGTGGATGAAGATTATATTGAATGATTTGAGTATGAAGTATGATGTTCCCATGAAACTGTTTCTTGACAATAAATTAGCCATCACAATATCCCAAAATATTGTTCTGGATTACAGAACAAAACACATTGAGATAGACTGGAACTTAATCATGGAGAGATTTGTAGAAGACTTGTAACCGGAATATATTTTCCTTTGTGATTGTTTGGAAATGTACCAAGGGATTGCTTAAGGGTGCTTTTAGGATCTTACTAGCAAGGTGAGAATGAGATATATCTCAACGGGGAATATTGTAATTTGTAAATGTAAAAAACGCCAATTTAGGACAATATATTGCTGTACAGGTTTACTGATTTATTTCTCTTGTTTGAACTGATTTTCTCATTTATTTTCCTTTATCGGCTTAAACCTATACAATGTTAACCATCTCTGTATCATTAACTAAAGAATACAATCTTTCCAAATTTCTTTCAAGTTATTGTTGTAATTTACTAATTCCAGGGATGTTATGGAAGGTGATTTTTCATGTGTCTGATATTGTACCACTGTCCTAATGTAGGGAATTACACAACGCAAGAATGATGATTTTTCTTTGAGCACTGGAGATTTTCCTACTCTTGGTTCTGAGAAGGACAAATCTGTACATGATGTTGAGTTGCAAGGTAGCTTATTATGCATAACTATTATCAACATTGATAGTAGTGCTGCCTTCTTTTGTCTTCAGATGCCTTCTTTTGTCTTTAGATGCCTTTGTATTTTTAGATTTTTATAGTTTTACACTGCATACGTTGTTCATTGACAAGTGATTGCTGTAATATCCAATGCCCTGCCCTGTCTCAGACACACCTTTCAATTTACTCCTTGAACTCCTAGCAGTTGCTGTGTGAATATGCACCCAGAAACTTGAATTATTTTATTAGAAATTTGCATTTTTCCCACAGTCTGTCATGTTCTGGTTCCGGAGTATTTTTTGGTCAGGTAAGACATGAAAAGAGATTTGGGATGCTCGATTACTTGACTTTTTCTCTTGGTTTCTAGGTGTTTTCTTTTGCTTTTTACTTGTAAGAATGTCTTATTAGCTTTATACTATTTTTTTTTTTAATAAAATTCCTTTAATAAAATATGAAAAGATTACGGGTGGCACATCTTATTTTGGTTTACATTGATTTTCTTATATACATATCAGTATGGTACTATAAGTAATTTGCTTTTGTTTATTAATCATGTTTACACTATATTTTGTTTCACTGTTTTTGCTGCTTTGTTAGTAGTTTTGTTTGTATGACATGGATTTTAAAATAGTTGAGAAAGAAAGAGTGTCTTCAGAGATGTTAATTGTTGTCTCGAGTTTGATTAAAAATTTATCAACCATTGGCAGATCACGGTTCTCATATTCGACCAGACTCTTCTTCTGGACTTCGGAGAGAGAAAAATGAGACCTCAACTGTCGGTTCGTCTTCAGGCTCTTGCTGTTATATTAATGTGTTGATGTGGTTTTTCGTCTGAATTTGGTGTTGGTTCTGTTTGGTTTTGTTACTGCCTATTTCTGCTTCTAGGTTTTGTGATCTATCATTGATGGTGATGATTATGTGTTGCTTGTGTCATAGATGATGTTCCTGTTCATGATAATGCAAAGGGTGAAGCTATAAATTCTTGGAGAAGAGACTATCAAGCTTTTAATGAGGGTGGTATGAGGCCTGGAATAGAGAAATGGCCAGGGAATCTCCAGACTTATCATAATATTCCTCCTCAACACTTTGATGTTTGGCGTGGTGCTCCAGTAAATAACCATCAACGTGATATTTGGTTCAGAGGTCCACCTAATGGTCCTCCTTTTGCTCCAGGTGGATTTCCAATGGAACCATTTCCATTTTATCGTCCACAATTTCCACCTAATGGTCTCACCAATCCACCTCAAGTTCCTCCTCCTGGAAGTGGTCCAAGAGGGCAGCATAATAATGGAGAACTTTACAGGCCACCTCATATGCCTGATGCTTACATTCCTCCAGGTATGCCATTGAGACCTGGTTTTTTTCCTGGCCCAATGGCCTATGAAGGCTACTATGGTCCTCCAATGGGCTATTGTAATTCAAACGATCGTGATGTCCCTTTCATGGGAATGGCAGCTGGAGCCCCTGTTTATAATAGGAACTCAAGTCAGAATCCACATGAGCCTGGCAATTCACATGGTAGATCTGGTGGACATGATCCTGCGGTAAAGCCATTGGCCTCAGAACCGGTAGAATCGAGCCACACTCCTGATACTGTCGGACCCTACAGGGTTCTTCTTAAACAACACAACAACTGGGATGGGAAAAACGAGCCAACAAACTGCGAGGACTCGTTAAAAACTAATGAATCATTTGTCGATATGAGGGACCAAGTGACAATGTCTGTCCAGGAGAATGATCATATTAGGAACATGAAGACAGATTTAAGGAGGACAAGTGCTCATGGCAAAGAAGCTTCTTCTCAAACATCGGGAAATCAAGGATCTAGTTTTGTAAACAATGCCAAATCACTTGAAAGCACCAGAAGCTTTAATAATGATAATATTGCATCAAGGAAATTGGATGGTGTAGTTTCTAATACACTAGAAACTTCATCAAGATTGCCCTCCCCTCAAGATTCCTCTCTGATTCAAAAGATAGAGGGTTTAAATGCAAAAGCCAGGGATAATTCATCTACTAAAAGTAAGGAGGAGAGGAGGAATAAGTTCCATCCTGATAGCCATGCGGAAAATGAAGGCAGTGCTGGTGTTGTGTTTCCTGATACAACCCTTGCCACTGAAGTTAAAAATCCAACTGCTTGTGGAGTGGGTGCTTTTGGAGGCGAAAAGAATTTTGAATCATCATCAGTCAGTGGAACAGCCACATCCAGGTTAGCCATTTTTTTTATATTAACTGCTTTAATTGTGGGTCATTTACCGTGGTGAATATATTGAAATGCTTATCCACAGGCATATTTCTCATGGCATGCAAGGCAGAGGCAATCATCGTAAGGGAAGACTTGATACTCAAGATGCTGATGGTTGGCGAAAGAAGTCTGGGGTCATAGATTCTTCAACTTCATCAGGTGCACAGTTGGATGCAACTAACATTCTTGTTGGTGAGCATCAAATATCTGTTGAGGCCTACGAAAGGTCTGGGTCCTATAGCCAAGTAGGGCGCGAAGGAGAGTCTATGCAAAACTTGGCTAATTCAGCTGATAACCATGCACAGGTAATGCACACACCATTTCTGTACTTGCTGCTTGCTATGCTTTACATTGAAATCTTGTACACTTTGAAACTCTTCAGCATGCTAATAATACAAAAGAGTTGGCCAAGCAACAGACTAAGCAACGGCAGGAGGAAGAGGTGGAGCGGCCTAAAAAGCAAAAGGCTAAAAGTCTAGTGAAGTTAGGCGAGGTAAACAAGCGCACACAAGCCGTGGAAGGGTCAACACAGAAAGTGCATGATGCAGATTCTGCCCTACAGAATAAGCAAGAAGCATTTCAACCTTCTGGAGCAGCCGCTTCATCTGTAATGCCTAATGACAATGATGCCTGTCAGGTCAGTGATGCCAACATTAACAGAGTTCAAAAAGCACCCATCTTGTCCAGTGAAACACCTTTAGAGACAGTAAAGAATGCCGACAAAGAACCTGTTCTGAATCACAATAAATCAGCGACCTTGTTCCACAATGTTAATTATGCTGATGCCACTAACGCTTTACAGGTTCATAACAATGTCACATCAAGGCAGAAAAGAGCGGGCTATAAACATAAAAATAATCTTTCTCAAGAGAAGACTTTGAATGTTTCTACAACCTCAAATGTCCCAAAAGTTGAGAATCACACAGTGGCTCATGTTAATGTTTCTTCTGGCATTGCTGCTGGTACAAATGAAGTTATTTCAACCTTCAGCTCAGGCTTACCCATGAATTCAACTTCTACGGTTGAGTCGCCTGTAAACCAGAAAAGGAAGAATAGCAGGAATAGTAAAAACAAACAGAAAGTTGAAGAGCCTTTGTCCGTGGCTGCATTACCATCAGCAACTGCAAAGGAAGTCAATCTTTCTAGAAGCTCTGTTGAAAATAAAGCCAGAAAAGACTTCGAATTAGATCAGGGCTCAGACCAAAGATATATAGAAAATGAAGAACCTTATGGTAGAATGAATGGCCAGTTGAAATCACAGCATTCTCGTAGGATGCCAAGAAGCTTGCAGGCTAATAGACAATCAGAAAAATCCCATGGGTGTGATGTTTTGATGTGGGCACCTGTTAAACCACCAAACAACATAGAGATCTTGGATGAATCAAGTGAGAAAAGTAAAACTGAGGCAATTGTTCCTGCAAAGAGTGATCAGCAGGTGCATAGTTTAAAGAATAAGAGGGCTGAAATGGAGAGATATGTTCCAAAACCTGTTGCAAAAGAAATGGCTCAGCAAGGAAGTTTACAACAAGTGGTGCCCTCGATAAGTCAAGTTCCAGCAGATGACTGTGTTGAAAGAGTTGATTCTGGTCCTCATGGCCCCCAGAATACTAGGCATGCTATTTCAGGTGTTGGAAAAATGGGTTCTGTAATGGAATCTAAAAATGGAGATAGCAGGCAGAGTAGGGCTTGGAAGGGAAAAGCACATGGATCATGGCGGCAAAGGAATTCAATAGAATCAAATGATATGCATGACATGCAAGATGGAGTGAACCATGGTTCAAATTCCTGTCAAAATATTCAGATACCAATGGAGCGTCAGCAATTGCATGTGTCTGAAACAAGCTTGTTGAGAGGGCATTCAAAGCATGCCAATGACACTAGTAAACCAGATGGCAGGGAGAGGCAGGTTCCTTTTAGACGACAGAAGGGCACTGGGGTGAACCATGAAGTTGATGAGAAGAAAAATGCTGGGGACACAGGGAAAACTGAAACATTGCTATCATCGTTTGAGCAAAATCAACCAGATCTCAATGCTGTTTCCATGGAAAGTCAAAGTACTGGAGATCGTATTTCATCTCATTGGCAACCCAAATTTCAGGCATCAACTAATAATCCGAGAGGTAACAGGCCCAAGAGAAAGGAGTCGGCTCATGCTGCTGGTGGTGTATCATTTTCAGATGGTCAAGACAATGAGTCTGGCACTCTTACAGCACAACCTCCGAGCCAATCAGTTCCGGAGAAGTCAAAGAGTGGGGATGCTTCAAATTTAGGGAATCCAGGGACTGTAAGAGAGACTAGAAATGCTCCACCAAAAGGCCGACCCCACTCCTCGAATCAGGTAGCTGCTAGCTCAAGTGAGCTGGCTCCACCAGGTATGGATTTTAGGCATCAGCAACGTCCATCATCTGGAGGACGCAGAAATGGAAACCAAAACCGTTTTGGAAAGGGACATGAATCTCAGGGAAACTGGGAAACAACTGCGCAAGATGAGTGGCATCATCATAACCAACCTGGTAACCGGGAAAGACAAGGTCCAAACTTTCATAATCATCATGAGTATCAAACTAATGGGCCACATGTTGGTGACAGCAAATCAGACTACTCTGAACGGCCTGAAGATGGTAATTATCAGGCTGGGGGAAGATTTAGGGAGAGAAGTCAAACTCACTCGAGACGAGGTGGTGGAAACTTCTCTCGACGCTAG
Protein sequence

>MS.gene29378.t1

MIVSRQPGYDFKLTSSTRRGGMTVLGKVVVPKPINLPSQRLENHGLDPNVEIVPKGTLGWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAETRLGSSHLSRFAEHVGENSMAWNGARTTETLGITQRKNDDFSLSTGDFPTLGSEKDKSVHDVELQDHGSHIRPDSSSGLRREKNETSTVDDVPVHDNAKGEAINSWRRDYQAFNEGGMRPGIEKWPGNLQTYHNIPPQHFDVWRGAPVNNHQRDIWFRGPPNGPPFAPGGFPMEPFPFYRPQFPPNGLTNPPQVPPPGSGPRGQHNNGELYRPPHMPDAYIPPGMPLRPGFFPGPMAYEGYYGPPMGYCNSNDRDVPFMGMAAGAPVYNRNSSQNPHEPGNSHGRSGGHDPAVKPLASEPVESSHTPDTVGPYRVLLKQHNNWDGKNEPTNCEDSLKTNESFVDMRDQVTMSVQENDHIRNMKTDLRRTSAHGKEASSQTSGNQGSSFVNNAKSLESTRSFNNDNIASRKLDGVVSNTLETSSRLPSPQDSSLIQKIEGLNAKARDNSSTKSKEERRNKFHPDSHAENEGSAGVVFPDTTLATEVKNPTACGVGAFGGEKNFESSSVSGTATSRHISHGMQGRGNHRKGRLDTQDADGWRKKSGVIDSSTSSGAQLDATNILVGEHQISVEAYERSGSYSQVGREGESMQNLANSADNHAQHANNTKELAKQQTKQRQEEEVERPKKQKAKSLVKLGEVNKRTQAVEGSTQKVHDADSALQNKQEAFQPSGAAASSVMPNDNDACQVSDANINRVQKAPILSSETPLETVKNADKEPVLNHNKSATLFHNVNYADATNALQVHNNVTSRQKRAGYKHKNNLSQEKTLNVSTTSNVPKVENHTVAHVNVSSGIAAGTNEVISTFSSGLPMNSTSTVESPVNQKRKNSRNSKNKQKVEEPLSVAALPSATAKEVNLSRSSVENKARKDFELDQGSDQRYIENEEPYGRMNGQLKSQHSRRMPRSLQANRQSEKSHGCDVLMWAPVKPPNNIEILDESSEKSKTEAIVPAKSDQQVHSLKNKRAEMERYVPKPVAKEMAQQGSLQQVVPSISQVPADDCVERVDSGPHGPQNTRHAISGVGKMGSVMESKNGDSRQSRAWKGKAHGSWRQRNSIESNDMHDMQDGVNHGSNSCQNIQIPMERQQLHVSETSLLRGHSKHANDTSKPDGRERQVPFRRQKGTGVNHEVDEKKNAGDTGKTETLLSSFEQNQPDLNAVSMESQSTGDRISSHWQPKFQASTNNPRGNRPKRKESAHAAGGVSFSDGQDNESGTLTAQPPSQSVPEKSKSGDASNLGNPGTVRETRNAPPKGRPHSSNQVAASSSELAPPGMDFRHQQRPSSGGRRNGNQNRFGKGHESQGNWETTAQDEWHHHNQPGNRERQGPNFHNHHEYQTNGPHVGDSKSDYSERPEDGNYQAGGRFRERSQTHSRRGGGNFSRR