AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051209


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051209.t1 MTR_2g040470 98.979 1273 13 0 1 1273 1 1273 0.0 2598
MS.gene051209.t1 MTR_2g040470 98.900 1273 13 1 1 1273 1 1272 0.0 2590
MS.gene051209.t1 MTR_2g040470 98.950 1048 10 1 1 1048 1 1047 0.0 2135
MS.gene051209.t1 MTR_4g125820 66.591 1320 384 16 1 1273 1 1310 0.0 1642
MS.gene051209.t1 MTR_4g125820 66.081 1082 323 11 1 1047 1 1073 0.0 1361
MS.gene051209.t1 MTR_4g053240 28.834 1304 716 46 75 1273 25 1221 6.98e-105 360
MS.gene051209.t1 MTR_4g053240 29.096 1306 723 47 75 1273 25 1234 8.71e-105 360
MS.gene051209.t1 MTR_4g053240 29.052 1308 723 48 75 1273 25 1236 4.68e-103 355
MS.gene051209.t1 MTR_4g053240 29.052 1308 723 48 75 1273 77 1288 7.45e-103 356
MS.gene051209.t1 MTR_1g112190 29.902 923 477 41 414 1267 333 1154 2.49e-62 233
MS.gene051209.t1 MTR_1g112190 30.220 910 492 38 414 1267 333 1155 3.66e-62 233
MS.gene051209.t1 MTR_4g123547 45.775 142 41 1 15 156 15 120 1.01e-26 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051209.t1 AT2G19390 46.641 1295 585 31 1 1273 1 1211 0.0 977
MS.gene051209.t1 AT2G19390 46.641 1295 585 31 1 1273 1 1211 0.0 977
MS.gene051209.t1 AT4G29790 46.574 1299 580 31 1 1273 1 1211 0.0 961
MS.gene051209.t1 AT5G22450 25.793 725 419 30 118 810 72 709 1.52e-23 108
MS.gene051209.t1 AT5G22450 34.783 161 98 2 862 1022 819 972 9.64e-22 103
MS.gene051209.t1 AT5G22450 25.793 725 419 30 118 810 72 709 1.52e-23 108
MS.gene051209.t1 AT5G22450 34.783 161 98 2 862 1022 819 972 9.64e-22 103
MS.gene051209.t1 AT5G22450 25.793 725 419 30 118 810 72 709 1.52e-23 108
MS.gene051209.t1 AT5G22450 34.783 161 98 2 862 1022 819 972 9.64e-22 103

Find 352 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTTGAATTTATATT+TGG 0.061280 2.3:+49078698 None:intergenic
TGATCTAAAGCAACTAATTT+TGG 0.093889 2.3:+49079011 None:intergenic
GGCTTTGGTAGTTCCATTTC+TGG 0.115166 2.3:+49069975 None:intergenic
GTAACGACTCTCATTCTTTC+AGG 0.189736 2.3:-49077411 MS.gene051209:intron
CAGCATTCTGTTTCTGTTAA+TGG 0.200894 2.3:-49069883 MS.gene051209:CDS
ATTGCAAGAGGATGGGTTTA+TGG 0.215847 2.3:-49069644 MS.gene051209:CDS
GCTCCATCTGCTTCCAAAAT+TGG 0.218609 2.3:+49073426 None:intergenic
ATTCTGCTTGCAATGGTTAT+AGG 0.219815 2.3:-49072426 MS.gene051209:CDS
TTTGAACCAGATGGCAATTC+TGG 0.223487 2.3:+49069829 None:intergenic
TTTGATATCTTCTGGTACTA+TGG 0.226779 2.3:+49078884 None:intergenic
TCATCTGTTTGCGATATTTC+AGG 0.230196 2.3:+49072017 None:intergenic
AATTGGTTGGCAGGCTTGTT+GGG 0.230786 2.3:-49070914 MS.gene051209:intron
GTGCTATTACTGGCCAATTT+TGG 0.237827 2.3:-49073439 MS.gene051209:CDS
GGCCCAAACATAGGTAAAAT+TGG 0.245055 2.3:-49078611 MS.gene051209:CDS
ATCTCTCAGCAAGCTGGGTT+GGG 0.250835 2.3:-49075308 MS.gene051209:CDS
GGGAATAAAATTTGTTCTTC+TGG 0.254273 2.3:+49074434 None:intergenic
ATTAAGTGATCGGCCAGTTT+TGG 0.264144 2.3:-49078633 MS.gene051209:CDS
CAAGCGCACTAGAACTTCTT+TGG 0.264503 2.3:-49078507 MS.gene051209:CDS
TTTGGAAGAGAGGACAAAAT+TGG 0.273336 2.3:+49079104 None:intergenic
TTGCTATCGGTGTCATTTCT+AGG 0.275068 2.3:+49075269 None:intergenic
CCAGATGGCAATTCTGGTTT+AGG 0.275579 2.3:+49069835 None:intergenic
CCAGTGTACAAAGGTCTATC+TGG 0.280712 2.3:+49079194 None:intergenic
TACTAATGGGTTAGGGTTGA+TGG 0.281065 2.3:-49072704 MS.gene051209:CDS
GGTTTCCTGCCCTTCTCTTT+AGG 0.287573 2.3:+49074225 None:intergenic
GATGCGTCTGGCAGTGATCT+TGG 0.291753 2.3:-49074366 MS.gene051209:CDS
GCATTCCTTGCTTAGTTTCC+TGG 0.295424 2.3:+49077470 None:intergenic
TGAACTTCTGAGCTGCTTTA+CGG 0.297814 2.3:+49074008 None:intergenic
TTGAGGAGGATGTTGCTTAC+TGG 0.299999 2.3:-49073385 MS.gene051209:CDS
CCCCAGCAAATAAGATTAAA+AGG 0.300490 2.3:-49074309 MS.gene051209:CDS
AGCTCTGCATGTCCATCTTC+TGG 0.302359 2.3:+49073584 None:intergenic
TGCCAGTATCTTCAAATTGA+TGG 0.309134 2.3:+49070803 None:intergenic
TCAGATGAGTTGTTTATAAC+AGG 0.310064 2.3:+49070177 None:intergenic
CAGCCTCCATGCCACTTTGC+TGG 0.315480 2.3:+49070728 None:intergenic
TTCTGCTTAGGCTTTGATTT+GGG 0.321878 2.3:+49069913 None:intergenic
TTTATAGTATCATGATGTTC+TGG 0.325612 2.3:+49072391 None:intergenic
CCTATGTTTGGGCCCAAAAC+TGG 0.325972 2.3:+49078620 None:intergenic
TCTAGGTTGGGCCTTCCTAA+TGG 0.328083 2.3:-49075359 MS.gene051209:intron
GAAGCTGTTACTAATGGGTT+AGG 0.335977 2.3:-49072712 MS.gene051209:CDS
GATGACCAAGGTCAGGATAT+TGG 0.336380 2.3:-49069694 MS.gene051209:CDS
AGGAAGATCTTTGGTCAAAC+AGG 0.338722 2.3:-49070140 MS.gene051209:CDS
ATAGGTAAAATTGGCATTCA+TGG 0.341874 2.3:-49078602 MS.gene051209:CDS
CTTGTTTGGAACAGCAGTTT+TGG 0.342654 2.3:+49078526 None:intergenic
ACTGCAGGTCGTGCTATTAC+TGG 0.346568 2.3:-49073449 MS.gene051209:intron
TCATGCTTCTTCTGTTTCTC+TGG 0.346752 2.3:-49070692 MS.gene051209:CDS
GCTAATAATGGTACAGTTCA+TGG 0.350168 2.3:-49077616 MS.gene051209:CDS
GAGAAACTGTTCCTAATGAT+TGG 0.352368 2.3:-49074596 MS.gene051209:CDS
TCTTCTTTGAATTTATATTT+GGG 0.360535 2.3:+49078699 None:intergenic
TTAGATAGTTCCCAATCATT+AGG 0.361392 2.3:+49074585 None:intergenic
TAATGCCGATTCCCCTGCTT+TGG 0.361608 2.3:-49074400 MS.gene051209:CDS
GAAGTTCTAGTGCGCTTGTT+TGG 0.362123 2.3:+49078512 None:intergenic
CTTCCGATCAGAAAGTTTCC+TGG 0.364566 2.3:+49073758 None:intergenic
TTGCAAGAGGATGGGTTTAT+GGG 0.366545 2.3:-49069643 MS.gene051209:CDS
CTTCAACGAGCCTTTATTCA+AGG 0.366979 2.3:-49070773 MS.gene051209:CDS
CTTGTGTGGCGGCTGCCAGA+GGG 0.367893 2.3:+49074470 None:intergenic
AATTCGCTCGTTAGGTCATC+TGG 0.369102 2.3:-49077673 MS.gene051209:CDS
TCATCTATATTTGAAGAAAC+TGG 0.375790 2.3:+49072739 None:intergenic
ATGGTTTACATGCAAACTTT+AGG 0.378295 2.3:-49078851 MS.gene051209:CDS
ATCCTACGACTTGCTAATAA+TGG 0.379984 2.3:-49077628 MS.gene051209:CDS
GTTTCCTGGAAATTGTTAAC+AGG 0.380244 2.3:+49077484 None:intergenic
TACCATCAATTTGAAGATAC+TGG 0.381211 2.3:-49070805 MS.gene051209:CDS
TTTCTGCTTAGGCTTTGATT+TGG 0.381307 2.3:+49069912 None:intergenic
CTTTCCTTGTCTGAATTAAG+AGG 0.382166 2.3:+49075218 None:intergenic
CAAAATTGAATACATCTATT+CGG 0.383264 2.3:-49074674 MS.gene051209:CDS
AAGAAGAAAGACTTGCTAGA+AGG 0.385692 2.3:-49071688 MS.gene051209:CDS
TCTATTCGGGCGCCACGATC+AGG 0.385698 2.3:-49074660 MS.gene051209:CDS
CTCTTGGAGCTTCAAAGCAT+TGG 0.392228 2.3:-49072304 MS.gene051209:CDS
GTTCGGAGGCAAGGAAGAAC+AGG 0.392726 2.3:-49074096 MS.gene051209:CDS
TAATTGGTTGGCAGGCTTGT+TGG 0.393339 2.3:-49070915 MS.gene051209:intron
AAGAACATATCCTTGAATAA+AGG 0.396602 2.3:+49070763 None:intergenic
TCCCATTGTAGGTGATGGTT+GGG 0.396604 2.3:-49077578 MS.gene051209:CDS
AAGTGACTTACCACAGGGTC+TGG 0.397153 2.3:+49072274 None:intergenic
CCAGCTCCAGCAGTTCCATT+AGG 0.398953 2.3:+49075344 None:intergenic
AACAATCGCAACTAACTAAA+GGG 0.408248 2.3:-49072627 MS.gene051209:CDS
AAAACCTGTTAACAATTTCC+AGG 0.408705 2.3:-49077488 MS.gene051209:CDS
CGGGCGCCACGATCAGGTTC+AGG 0.409692 2.3:-49074654 MS.gene051209:CDS
GCAATATTCGACGATTTGAC+TGG 0.410522 2.3:-49071990 MS.gene051209:CDS
ACGACATGTCAGTGCTGCTC+TGG 0.410960 2.3:-49078961 MS.gene051209:CDS
ACTAATGGGTTAGGGTTGAT+GGG 0.413879 2.3:-49072703 MS.gene051209:CDS
CGACGATTTGACTGGGTTTG+AGG 0.415531 2.3:-49071982 MS.gene051209:CDS
AGCCTCCATGCCACTTTGCT+GGG 0.416281 2.3:+49070729 None:intergenic
ACATCATGATTATTCATGTT+CGG 0.417464 2.3:+49070219 None:intergenic
GTTTCTGTTAATGGCCTCCT+TGG 0.418183 2.3:-49069874 MS.gene051209:CDS
CCAAGCTTCTCAGATGTCAT+TGG 0.420218 2.3:+49074042 None:intergenic
TGTGTGGCGGCTGCCAGAGG+GGG 0.424297 2.3:+49074472 None:intergenic
GGAGTTGCCAAACGTTTGTC+TGG 0.425060 2.3:-49074339 MS.gene051209:CDS
CATCCATTCCAGGCAGTTGC+AGG 0.425832 2.3:+49069722 None:intergenic
GATTGTGAAGCTGTTACTAA+TGG 0.426204 2.3:-49072718 MS.gene051209:CDS
GAGTGCTGGCCTACCGGCTT+TGG 0.428968 2.3:+49069960 None:intergenic
ACCGTCTCCACGTTCTTCCC+TGG 0.429713 2.3:+49074119 None:intergenic
GCAATTCTGCTGTCAGTGAT+AGG 0.431808 2.3:-49075250 MS.gene051209:CDS
GGCCTTCCTAATGGAACTGC+TGG 0.434465 2.3:-49075350 MS.gene051209:CDS
TTCTCTGAAAGTGAAGAGTC+AGG 0.435366 2.3:-49074264 MS.gene051209:CDS
TCATCAAGCACATCCATTCC+AGG 0.435923 2.3:+49069712 None:intergenic
CATCTCTCAGCAAGCTGGGT+TGG 0.437609 2.3:-49075309 MS.gene051209:CDS
TTCAAAGAAGAGAGCTCGTT+CGG 0.439154 2.3:-49078687 MS.gene051209:CDS
AGAGCTAGTGGCTGCTGTAA+AGG 0.439259 2.3:-49073567 MS.gene051209:CDS
GAGCTAGTGGCTGCTGTAAA+GGG 0.439261 2.3:-49073566 MS.gene051209:CDS
AGCTGGACAAAATGTTCAAA+AGG 0.439924 2.3:-49074184 MS.gene051209:CDS
AGTGGCCAAGCAAGCTGCAT+TGG 0.440219 2.3:-49070854 MS.gene051209:CDS
AAAACAAAGAAGAAGCGTTC+AGG 0.441165 2.3:-49077547 MS.gene051209:CDS
TGCTGACCTGCTTTCTGCTT+AGG 0.447970 2.3:+49069901 None:intergenic
CTGCAGGTTCCATTAGTTCA+CGG 0.448394 2.3:-49070263 MS.gene051209:intron
ACAGTTTCTCTGTTAACAAC+TGG 0.448760 2.3:+49074609 None:intergenic
CAAGTGGGAAGGAAGATCTT+TGG 0.449476 2.3:-49070149 MS.gene051209:CDS
ATCTTTGTTGAATCTAGATA+AGG 0.451057 2.3:+49078724 None:intergenic
ATGCGTCTGGCAGTGATCTT+GGG 0.451343 2.3:-49074365 MS.gene051209:CDS
GTTAACAACTGGTGACATCT+TGG 0.454034 2.3:+49074620 None:intergenic
GTTTCTCTGGAAGCAAGAAC+AGG 0.455362 2.3:-49070679 MS.gene051209:intron
AACTTCTTTGGTTGATGTCA+AGG 0.455942 2.3:-49078495 MS.gene051209:intron
CCTTTAGTATTAGAGAGTGC+TGG 0.457070 2.3:+49069946 None:intergenic
ATACTCAATTTGAGACAAAC+GGG 0.458032 2.3:-49072507 MS.gene051209:CDS
ATTTGTTCTTCTGGCAGTAC+GGG 0.460547 2.3:+49074443 None:intergenic
TAAAGAGAAGGGCAGGAAAC+CGG 0.464209 2.3:-49074223 MS.gene051209:CDS
GTGGCCAAGCAAGCTGCATT+GGG 0.464635 2.3:-49070853 MS.gene051209:CDS
GAAAGAGACAGAGATGGAAA+AGG 0.465295 2.3:-49070018 MS.gene051209:CDS
AAATCCCAATGCAGCTTGCT+TGG 0.466745 2.3:+49070849 None:intergenic
GATTCTGTGTCTGATGCGTC+TGG 0.470007 2.3:-49074378 MS.gene051209:CDS
TCTGGCAGTGATCTTGGGTT+AGG 0.471433 2.3:-49074360 MS.gene051209:CDS
TCTTGTGTGGCGGCTGCCAG+AGG 0.472972 2.3:+49074469 None:intergenic
AGGGCTCCTCCGTGAACTAA+TGG 0.475019 2.3:+49070254 None:intergenic
TTTCTTCGGTATGATAATTG+AGG 0.475490 2.3:-49073402 MS.gene051209:CDS
ATTCATGGTCATGCAGTAAC+GGG 0.475818 2.3:-49078587 MS.gene051209:CDS
GGTCATCCATTGGAATTTCA+AGG 0.475939 2.3:+49069620 None:intergenic
ATGGGTTGTGCAAGAGATAT+CGG 0.476585 2.3:-49072685 MS.gene051209:CDS
TTATTTGTGCTAACACCAGC+AGG 0.476627 2.3:+49074540 None:intergenic
TGCAGGTTAGACAAATCTAT+AGG 0.476734 2.3:+49069739 None:intergenic
TATCGGACATGATGCTCAAA+GGG 0.477080 2.3:-49072668 MS.gene051209:CDS
TGGTTGAATATTGATGATGA+TGG 0.477136 2.3:-49069667 MS.gene051209:CDS
CCTAATGGAACTGCTGGAGC+TGG 0.477706 2.3:-49075344 MS.gene051209:CDS
TTGTCTAACCTGCAACTGCC+TGG 0.478559 2.3:-49069730 MS.gene051209:CDS
TATGAATGAAAGGCTTCTCT+TGG 0.479369 2.3:-49072320 MS.gene051209:CDS
TCAGAAAGTTTCCTGGTTGG+TGG 0.479718 2.3:+49073765 None:intergenic
CATGATGCTCAAAGGGGTGC+TGG 0.479912 2.3:-49072661 MS.gene051209:CDS
GCTTTCTGGTCTATCCCATC+CGG 0.480067 2.3:+49074204 None:intergenic
AAAATTGAATACATCTATTC+GGG 0.480556 2.3:-49074673 MS.gene051209:CDS
AGATAACAGCCTTTGACAAA+GGG 0.480566 2.3:+49072588 None:intergenic
TCCCAACCATCACCTACAAT+GGG 0.481563 2.3:+49077577 None:intergenic
TGAAGCCTAAAGAGAAGGGC+AGG 0.481900 2.3:-49074230 MS.gene051209:CDS
CGGTGCTTCAAGTGTTCCAT+CGG 0.482058 2.3:-49070085 MS.gene051209:CDS
GGGATTTGTTAAACGAACAT+TGG 0.482657 2.3:-49070833 MS.gene051209:CDS
GACATGTCGTTTATAATCCA+TGG 0.483103 2.3:+49078974 None:intergenic
AGTGTTCCATCGGGCATTAG+AGG 0.483243 2.3:-49070075 MS.gene051209:CDS
GAACTGCTTCGTGACATGTT+TGG 0.483490 2.3:+49079086 None:intergenic
TTGTGTGGCGGCTGCCAGAG+GGG 0.484524 2.3:+49074471 None:intergenic
TAACTAGATGGAGATTCATC+TGG 0.484800 2.3:+49078930 None:intergenic
AGAATCCAAAGCAGGGGAAT+CGG 0.484941 2.3:+49074395 None:intergenic
GATACTCAATTTGAGACAAA+CGG 0.486199 2.3:-49072508 MS.gene051209:CDS
TTCCCATTGTAGGTGATGGT+TGG 0.486986 2.3:-49077579 MS.gene051209:CDS
AAGAACGTGGAGACGGTGTT+CGG 0.487115 2.3:-49074113 MS.gene051209:CDS
CCTTTCCGACTTGAACATGA+TGG 0.487640 2.3:-49069599 MS.gene051209:CDS
TCTGAGAAGCTTGGAAACAT+AGG 0.488695 2.3:-49074033 MS.gene051209:CDS
TGAAATCCGTGCAGCAAGGC+AGG 0.488937 2.3:-49073792 MS.gene051209:intron
TCTCTACCAAGCAGCACAAA+AGG 0.489365 2.3:-49070051 MS.gene051209:CDS
AAGCAGATGGAGCCTTTCTT+CGG 0.489807 2.3:-49073416 MS.gene051209:CDS
GATGGCATCTCTCAGCAAGC+TGG 0.490854 2.3:-49075314 MS.gene051209:CDS
TTCCCAACCATCACCTACAA+TGG 0.491199 2.3:+49077576 None:intergenic
CAGCTCAGAAGTTCAAGACT+AGG 0.495124 2.3:-49074000 MS.gene051209:CDS
ATTGTGAAGCTGTTACTAAT+GGG 0.496920 2.3:-49072717 MS.gene051209:CDS
TCAATTATCATACCGAAGAA+AGG 0.497085 2.3:+49073404 None:intergenic
CTTGTATTTCTCCCACCTGA+GGG 0.498379 2.3:+49070883 None:intergenic
TGTTGGGGCCGCAATCCCTC+AGG 0.498915 2.3:-49070898 MS.gene051209:CDS
TCTCCATCTAGTTATGCAAA+AGG 0.499279 2.3:-49078921 MS.gene051209:CDS
GGAAGATACGTCAAACTTGT+TGG 0.500958 2.3:+49079223 None:intergenic
TCGGCATTACTTGAAACAAC+GGG 0.501125 2.3:+49074414 None:intergenic
CAGATAACAGCCTTTGACAA+AGG 0.503693 2.3:+49072587 None:intergenic
AGAAACTGTTCCTAATGATT+GGG 0.503704 2.3:-49074595 MS.gene051209:CDS
ATGGCAATTCTGGTTTAGGT+TGG 0.503756 2.3:+49069839 None:intergenic
AGAGAAGTGCAATCCAGAAA+TGG 0.503937 2.3:-49069988 MS.gene051209:CDS
GGCGTCAATGACCTTGTAGC+AGG 0.504124 2.3:+49074063 None:intergenic
GAACAATCGCAACTAACTAA+AGG 0.506568 2.3:-49072628 MS.gene051209:CDS
AATTTGTTCTTCTGGCAGTA+CGG 0.506715 2.3:+49074442 None:intergenic
GTAGTTGATATTCCATCCAA+TGG 0.506913 2.3:-49072364 MS.gene051209:CDS
TTCTGCTGTCAGTGATAGGC+GGG 0.507106 2.3:-49075246 MS.gene051209:CDS
GGAGTTGGAACTGAACCATC+TGG 0.507806 2.3:-49072485 MS.gene051209:CDS
GCTGCTTCATTAGATAGATC+AGG 0.508302 2.3:-49079152 MS.gene051209:CDS
GTTGTACTTGAAGACCCGTC+TGG 0.509431 2.3:+49077517 None:intergenic
TGCGGACTAATTCGCTCGTT+AGG 0.510343 2.3:-49077681 MS.gene051209:CDS
ATTTGAGACAAACGGGGAGT+TGG 0.511041 2.3:-49072500 MS.gene051209:CDS
AGAAGAAAGACTTGCTAGAA+GGG 0.511825 2.3:-49071687 MS.gene051209:CDS
ACTGCTCATTCTGCTTGCAA+TGG 0.511929 2.3:-49072433 MS.gene051209:CDS
CAGATAAATCTTGAGTCAAG+CGG 0.513441 2.3:-49072775 MS.gene051209:CDS
AGAAGTGAAAGAGACAGAGA+TGG 0.513581 2.3:-49070024 MS.gene051209:CDS
TGATATTCCATCCAATGGGT+TGG 0.514972 2.3:-49072359 MS.gene051209:CDS
CGATCAGAAAGTTTCCTGGT+TGG 0.514995 2.3:+49073762 None:intergenic
CATTCATGGTCATGCAGTAA+CGG 0.515074 2.3:-49078588 MS.gene051209:CDS
CAGAAGATATCAAAAGACTC+AGG 0.515370 2.3:-49078875 MS.gene051209:CDS
CAGATAGACCTTTGTACACT+GGG 0.516204 2.3:-49079193 MS.gene051209:CDS
CAAAGGGGTGCTGGAATTGT+CGG 0.520537 2.3:-49072652 MS.gene051209:CDS
TAGGATTTGAAAAGAGTGAA+AGG 0.521203 2.3:-49073981 MS.gene051209:intron
TGAACATGACCAGCAAAAGT+TGG 0.522238 2.3:-49078558 MS.gene051209:CDS
TCTCTAATACTAAAGGAGAA+AGG 0.523624 2.3:-49069939 MS.gene051209:CDS
AAGCCTTTCATTCATATCCA+TGG 0.525067 2.3:+49072327 None:intergenic
TGGGGCCGCAATCCCTCAGG+TGG 0.526954 2.3:-49070895 MS.gene051209:CDS
GTTATCTGCTTTAATTTCAG+AGG 0.527442 2.3:-49072572 MS.gene051209:CDS
GATGATGGATTGCAAGAGGA+TGG 0.527822 2.3:-49069652 MS.gene051209:CDS
AGTGACTTACCACAGGGTCT+GGG 0.528180 2.3:+49072275 None:intergenic
ATCTGCTTTAATTTCAGAGG+AGG 0.528306 2.3:-49072569 MS.gene051209:CDS
CCAGCACTCTCTAATACTAA+AGG 0.528717 2.3:-49069946 MS.gene051209:CDS
CCTAAACCAGAATTGCCATC+TGG 0.529230 2.3:-49069835 MS.gene051209:CDS
GATTTAGTAGGTCCAGAAGA+TGG 0.529539 2.3:-49073596 MS.gene051209:intron
TAGTTGATATTCCATCCAAT+GGG 0.529542 2.3:-49072363 MS.gene051209:CDS
GTACAAAGGTCTATCTGGGC+TGG 0.530267 2.3:+49079199 None:intergenic
GGCATCATATTCCAACCCAT+TGG 0.530290 2.3:+49072348 None:intergenic
ATGGCATCTCTCAGCAAGCT+GGG 0.530299 2.3:-49075313 MS.gene051209:CDS
TTCTCCCACCTGAGGGATTG+CGG 0.530353 2.3:+49070890 None:intergenic
TGTTCAAAAGGTTTCTAACA+TGG 0.530385 2.3:-49074172 MS.gene051209:CDS
ATTAGAGAGTGCTGGCCTAC+CGG 0.530906 2.3:+49069954 None:intergenic
AAGCAATTCCCCTTTGTCAA+AGG 0.531023 2.3:-49072597 MS.gene051209:CDS
AAAGAGACAGAGATGGAAAA+GGG 0.531438 2.3:-49070017 MS.gene051209:CDS
AAGCTGTTACTAATGGGTTA+GGG 0.535236 2.3:-49072711 MS.gene051209:CDS
TAACCTGCAACTGCCTGGAA+TGG 0.537529 2.3:-49069725 MS.gene051209:CDS
TCGTGACATGTTTGGAAGAG+AGG 0.538199 2.3:+49079094 None:intergenic
GCTTGTATTTCTCCCACCTG+AGG 0.542239 2.3:+49070882 None:intergenic
TCATATTCCAACCCATTGGA+TGG 0.544067 2.3:+49072352 None:intergenic
ATTGGTTGGCAGGCTTGTTG+GGG 0.544124 2.3:-49070913 MS.gene051209:intron
ATATTTGAAGAAACTGGAGT+TGG 0.545125 2.3:+49072745 None:intergenic
CAATATTCGACGATTTGACT+GGG 0.545371 2.3:-49071989 MS.gene051209:CDS
AGAACCGCCAGACAAACGTT+TGG 0.545706 2.3:+49074332 None:intergenic
ATCTAATGAAGCAGCTATGT+GGG 0.546066 2.3:+49079160 None:intergenic
CAGTGTACAAAGGTCTATCT+GGG 0.546084 2.3:+49079195 None:intergenic
TTGAAGCACCGACATCATCA+AGG 0.546761 2.3:+49070097 None:intergenic
TCAGACACAGAATCCAAAGC+AGG 0.548641 2.3:+49074387 None:intergenic
GTAAAGGGTCTAATCAACTC+TGG 0.553255 2.3:-49073551 MS.gene051209:intron
GAGAAGGCAGCTGAAGATGA+CGG 0.553422 2.3:+49074282 None:intergenic
GTGTGGCGGCTGCCAGAGGG+GGG 0.553667 2.3:+49074473 None:intergenic
CGACATGTCAGTGCTGCTCT+GGG 0.553945 2.3:-49078960 MS.gene051209:CDS
AGAAATGGAACTACCAAAGC+CGG 0.556817 2.3:-49069973 MS.gene051209:CDS
TGACTCTTCACTTTCAGAGA+AGG 0.558084 2.3:+49074266 None:intergenic
CTCTTAATTCAGACAAGGAA+AGG 0.558194 2.3:-49075217 MS.gene051209:CDS
ATGTTCGGACTAAATTGTGA+AGG 0.559401 2.3:+49070234 None:intergenic
GGAGACGGTGTTCGGAGGCA+AGG 0.560559 2.3:-49074105 MS.gene051209:CDS
GTTTACATGCAAACTTTAGG+AGG 0.562242 2.3:-49078848 MS.gene051209:CDS
TCTAGACAAACTTGTTGTGA+TGG 0.562492 2.3:-49071520 MS.gene051209:CDS
TCTGCTTTAATTTCAGAGGA+GGG 0.563070 2.3:-49072568 MS.gene051209:CDS
CTGAGAAGCTTGGAAACATA+GGG 0.565255 2.3:-49074032 MS.gene051209:CDS
ATGCAAACTTTAGGAGGGCA+AGG 0.566011 2.3:-49078842 MS.gene051209:intron
TATGGGCCTTGAAATTCCAA+TGG 0.566347 2.3:-49069626 MS.gene051209:CDS
TGAAGTTATAATTAGCTAGC+GGG 0.566600 2.3:+49072455 None:intergenic
TGTTGCTTACTGGAAACAAA+AGG 0.568225 2.3:-49073375 MS.gene051209:intron
TGAGGAGAAATATCAAAGAC+AGG 0.568465 2.3:-49071964 MS.gene051209:intron
GTCTAACAATAGCAATGCCA+AGG 0.569104 2.3:-49069794 MS.gene051209:CDS
ATATCGGACATGATGCTCAA+AGG 0.569859 2.3:-49072669 MS.gene051209:CDS
CAGGAAACTTTCTGATCGGA+AGG 0.570600 2.3:-49073757 MS.gene051209:CDS
GGAAAAGAATGAGTGTGCCC+TGG 0.570772 2.3:-49069773 MS.gene051209:CDS
TCAAAGCCTAAGCAGAAAGC+AGG 0.571102 2.3:-49069907 MS.gene051209:CDS
CTTCGGTATGATAATTGAGG+AGG 0.571387 2.3:-49073399 MS.gene051209:CDS
TCTCTGAAAGTGAAGAGTCA+GGG 0.573468 2.3:-49074263 MS.gene051209:CDS
GTTGCCAAACGTTTGTCTGG+CGG 0.573657 2.3:-49074336 MS.gene051209:CDS
GGAAGATCTTTGGTCAAACA+GGG 0.573713 2.3:-49070139 MS.gene051209:CDS
ATCGGCATTACTTGAAACAA+CGG 0.574436 2.3:+49074413 None:intergenic
GGTGCTTCAAGTGTTCCATC+GGG 0.574886 2.3:-49070084 MS.gene051209:CDS
CCAATGACATCTGAGAAGCT+TGG 0.577012 2.3:-49074042 MS.gene051209:CDS
GTGAAGTTATAATTAGCTAG+CGG 0.577493 2.3:+49072454 None:intergenic
AAGGTCAGGATATTGGTTCG+TGG 0.580356 2.3:-49069687 MS.gene051209:CDS
TATCTAATGAAGCAGCTATG+TGG 0.580916 2.3:+49079159 None:intergenic
AGGCAGGTCGTCCACCAACC+AGG 0.581002 2.3:-49073776 MS.gene051209:CDS
AGCAGTTCTTCAGCGACACA+AGG 0.581384 2.3:-49079071 MS.gene051209:CDS
CAAAGGTCTATCTGGGCTGG+TGG 0.582672 2.3:+49079202 None:intergenic
CCAGATAGACCTTTGTACAC+TGG 0.582861 2.3:-49079194 MS.gene051209:CDS
TGAGATGAAGCCTAAAGAGA+AGG 0.583090 2.3:-49074235 MS.gene051209:CDS
GCTGCTTCTTCCCAGCAAAG+TGG 0.587654 2.3:-49070739 MS.gene051209:CDS
CTAGCGGGTGGCTATCCAGA+TGG 0.588891 2.3:+49072470 None:intergenic
TTCTTCCCAGCAAAGTGGCA+TGG 0.590505 2.3:-49070734 MS.gene051209:CDS
CTCCAGCAGTTCCATTAGGA+AGG 0.590607 2.3:+49075348 None:intergenic
ATGATGGATTGCAAGAGGAT+GGG 0.590623 2.3:-49069651 MS.gene051209:CDS
GATGGGATAGACCAGAAAGC+TGG 0.590650 2.3:-49074201 MS.gene051209:CDS
CTCTGAAAGTGAAGAGTCAG+GGG 0.591979 2.3:-49074262 MS.gene051209:CDS
TGTGCTTGATGACCAAGGTC+AGG 0.592486 2.3:-49069701 MS.gene051209:CDS
TCAAACCATCATGTTCAAGT+CGG 0.595483 2.3:+49069594 None:intergenic
TGGAACTGTAGATAGAGAGA+AGG 0.595928 2.3:-49077653 MS.gene051209:CDS
AAAGACTAGCCACTGATGCT+CGG 0.596102 2.3:-49077444 MS.gene051209:CDS
AGATGGACATGCAGAGCTAG+TGG 0.596187 2.3:-49073579 MS.gene051209:CDS
GTGACTTACCACAGGGTCTG+GGG 0.596589 2.3:+49072276 None:intergenic
TCCAGGGAAGAACGTGGAGA+CGG 0.598223 2.3:-49074120 MS.gene051209:CDS
GTACAGTTCATGGCGAGGAA+CGG 0.598919 2.3:-49077606 MS.gene051209:CDS
GCTGGAGCTGGAAAATCAGA+TGG 0.600381 2.3:-49075332 MS.gene051209:CDS
ATTTCAGAGGAGGGTTGCAG+TGG 0.601983 2.3:-49072559 MS.gene051209:CDS
AAGTCGGAAAGGTCATCCAT+TGG 0.603212 2.3:+49069610 None:intergenic
CAACCAGGAAACTTTCTGAT+CGG 0.603313 2.3:-49073761 MS.gene051209:CDS
ACATGTCGTTTATAATCCAT+GGG 0.603754 2.3:+49078975 None:intergenic
CCATCATGTTCAAGTCGGAA+AGG 0.603837 2.3:+49069599 None:intergenic
TGTTCGGACTAAATTGTGAA+GGG 0.605461 2.3:+49070235 None:intergenic
GAGATGAAGCCTAAAGAGAA+GGG 0.605915 2.3:-49074234 MS.gene051209:CDS
ACGAACCAATATCCTGACCT+TGG 0.608962 2.3:+49069689 None:intergenic
AGTGCATCAGCAGATTTCCA+TGG 0.608979 2.3:-49073705 MS.gene051209:intron
TATTTGTGCTAACACCAGCA+GGG 0.611269 2.3:+49074541 None:intergenic
CGTTCAGGCATCAAACCAGA+CGG 0.613390 2.3:-49077532 MS.gene051209:CDS
TTTACATGCAAACTTTAGGA+GGG 0.613405 2.3:-49078847 MS.gene051209:CDS
TGGAATTTCCCCAGACCCTG+TGG 0.619341 2.3:-49072284 MS.gene051209:intron
GCAGTACGGGAGCTCTTGTG+TGG 0.619949 2.3:+49074456 None:intergenic
TGGGTTGGAATATGATGCCA+TGG 0.620858 2.3:-49072344 MS.gene051209:CDS
AACTCATCTGAACAGACAAG+TGG 0.621295 2.3:-49070165 MS.gene051209:CDS
CAGACACAGAATCCAAAGCA+GGG 0.621779 2.3:+49074388 None:intergenic
CCTCGCTGCCCAGTGTACAA+AGG 0.622350 2.3:+49079185 None:intergenic
GAGAAATACAAGCAGCAAAG+TGG 0.628707 2.3:-49070872 MS.gene051209:CDS
AGAAGATATCAAAAGACTCA+GGG 0.628727 2.3:-49078874 MS.gene051209:CDS
GAGAAGGGCAGGAAACCGGA+TGG 0.629197 2.3:-49074219 MS.gene051209:CDS
GAAAAGAATGAGTGTGCCCT+GGG 0.630044 2.3:-49069772 MS.gene051209:CDS
ATGCCATGGATATGAATGAA+AGG 0.630277 2.3:-49072330 MS.gene051209:CDS
ATCTGAACAGACAAGTGGGA+AGG 0.630835 2.3:-49070160 MS.gene051209:CDS
TCATAAGTCTAATCGTCCCA+TGG 0.631116 2.3:-49078991 MS.gene051209:CDS
ATTCTGCTGTCAGTGATAGG+CGG 0.631454 2.3:-49075247 MS.gene051209:CDS
ATTTGTGCTAACACCAGCAG+GGG 0.634227 2.3:+49074542 None:intergenic
AACGTGGAGACGGTGTTCGG+AGG 0.635533 2.3:-49074110 MS.gene051209:CDS
TTGACATTCTTTGGTCACTG+AGG 0.639241 2.3:+49071651 None:intergenic
GGGGCCGCAATCCCTCAGGT+GGG 0.639481 2.3:-49070894 MS.gene051209:CDS
GATAACAGCCTTTGACAAAG+GGG 0.640228 2.3:+49072589 None:intergenic
TGAAGCACCGACATCATCAA+GGG 0.640346 2.3:+49070098 None:intergenic
AGAGAAACAGAAGAAGCATG+AGG 0.640790 2.3:+49070694 None:intergenic
TATAGGTTCATCTTCACCCA+GGG 0.641238 2.3:+49069756 None:intergenic
GTTCAGGCATCAAACCAGAC+GGG 0.641825 2.3:-49077531 MS.gene051209:CDS
CTATAGGTTCATCTTCACCC+AGG 0.644460 2.3:+49069755 None:intergenic
ACAATCGCAACTAACTAAAG+GGG 0.644566 2.3:-49072626 MS.gene051209:CDS
TTCGGAGGCAAGGAAGAACA+GGG 0.644777 2.3:-49074095 MS.gene051209:CDS
GCAGTTCTTCAGCGACACAA+GGG 0.645332 2.3:-49079070 MS.gene051209:CDS
GTTGGTCTGATAGCTTGCCA+AGG 0.646667 2.3:+49069857 None:intergenic
ACTGACAGCAGAATTGCTAT+CGG 0.647023 2.3:+49075256 None:intergenic
AGAAGGGCAGGAAACCGGAT+GGG 0.649231 2.3:-49074218 MS.gene051209:CDS
GTACGGGAGCTCTTGTGTGG+CGG 0.649415 2.3:+49074459 None:intergenic
TAGTTGAATTGAATTCATCA+CGG 0.650292 2.3:+49074712 None:intergenic
TGAAAGTGAAGAGTCAGGGG+TGG 0.650335 2.3:-49074259 MS.gene051209:CDS
ACTCATCTGAACAGACAAGT+GGG 0.650385 2.3:-49070164 MS.gene051209:CDS
CAGTTCTTCAGCGACACAAG+GGG 0.651284 2.3:-49079069 MS.gene051209:CDS
AGAGAACCTCTAATGCCCGA+TGG 0.653869 2.3:+49070069 None:intergenic
GAAACTCCTGAACCTGATCG+TGG 0.655750 2.3:+49074648 None:intergenic
GATATCAAAAGACTCAGGGA+TGG 0.656067 2.3:-49078870 MS.gene051209:CDS
TACCATTATTAGCAAGTCGT+AGG 0.656785 2.3:+49077626 None:intergenic
TTCCCAGCAAAGTGGCATGG+AGG 0.658997 2.3:-49070731 MS.gene051209:CDS
TGATGATGATGGATTGCAAG+AGG 0.662045 2.3:-49069656 MS.gene051209:CDS
GGTCTGATAGCTTGCCAAGG+AGG 0.662098 2.3:+49069860 None:intergenic
CTTGCATCCAGGGAAGAACG+TGG 0.663565 2.3:-49074126 MS.gene051209:CDS
TTTAATTCTAGATGGATGTG+CGG 0.664325 2.3:-49077699 MS.gene051209:intron
CGGGTCTTCAAGTACAACAT+CGG 0.669966 2.3:-49077512 MS.gene051209:CDS
TCGTCCTCTTAATTCAGACA+AGG 0.670429 2.3:-49075222 MS.gene051209:CDS
AGTTATAATTAGCTAGCGGG+TGG 0.671343 2.3:+49072458 None:intergenic
AATTTCCAGGAAACTAAGCA+AGG 0.671463 2.3:-49077475 MS.gene051209:CDS
AAGATCTTTGGTCAAACAGG+GGG 0.677041 2.3:-49070137 MS.gene051209:CDS
TAATGGTACAGTTCATGGCG+AGG 0.677094 2.3:-49077611 MS.gene051209:CDS
AGACACAGAATCCAAAGCAG+GGG 0.678284 2.3:+49074389 None:intergenic
TTTGTGCTAACACCAGCAGG+GGG 0.686764 2.3:+49074543 None:intergenic
AGATCAGGTAGCTTTCGTGA+AGG 0.689212 2.3:-49079137 MS.gene051209:CDS
ATGGAACTACCAAAGCCGGT+AGG 0.693338 2.3:-49069969 MS.gene051209:CDS
TTGTTAAACGAACATTGGAG+CGG 0.698835 2.3:-49070828 MS.gene051209:CDS
CCTTTGTACACTGGGCAGCG+AGG 0.707159 2.3:-49079185 MS.gene051209:CDS
GAAGATCTTTGGTCAAACAG+GGG 0.719243 2.3:-49070138 MS.gene051209:CDS
ATGGATGTGCTTGATGACCA+AGG 0.719431 2.3:-49069706 MS.gene051209:CDS
ATCGGACATGATGCTCAAAG+GGG 0.730443 2.3:-49072667 MS.gene051209:CDS
GATGGCTTATGAGAAATACA+TGG 0.741400 2.3:-49071502 MS.gene051209:intron
CAGGTTCCATTAGTTCACGG+AGG 0.742073 2.3:-49070260 MS.gene051209:CDS
GAATTGTCCCTTGATGATGT+CGG 0.767685 2.3:-49070105 MS.gene051209:CDS
GGAGGCAAGGAAGAACAGGG+CGG 0.772175 2.3:-49074092 MS.gene051209:CDS
TACTCAATTTGAGACAAACG+GGG 0.772995 2.3:-49072506 MS.gene051209:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.3 gene 49069594 49079255 49069594 ID=MS.gene051209
chr2.3 mRNA 49069594 49079255 49069594 ID=MS.gene051209.t1;Parent=MS.gene051209
chr2.3 exon 49078843 49079255 49078843 ID=MS.gene051209.t1.exon1;Parent=MS.gene051209.t1
chr2.3 CDS 49078843 49079255 49078843 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49078496 49078772 49078496 ID=MS.gene051209.t1.exon2;Parent=MS.gene051209.t1
chr2.3 CDS 49078496 49078772 49078496 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49077412 49077710 49077412 ID=MS.gene051209.t1.exon3;Parent=MS.gene051209.t1
chr2.3 CDS 49077412 49077710 49077412 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49075194 49075376 49075194 ID=MS.gene051209.t1.exon4;Parent=MS.gene051209.t1
chr2.3 CDS 49075194 49075376 49075194 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49073982 49074743 49073982 ID=MS.gene051209.t1.exon5;Parent=MS.gene051209.t1
chr2.3 CDS 49073982 49074743 49073982 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49073706 49073800 49073706 ID=MS.gene051209.t1.exon6;Parent=MS.gene051209.t1
chr2.3 CDS 49073706 49073800 49073706 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49073552 49073611 49073552 ID=MS.gene051209.t1.exon7;Parent=MS.gene051209.t1
chr2.3 CDS 49073552 49073611 49073552 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49073376 49073464 49073376 ID=MS.gene051209.t1.exon8;Parent=MS.gene051209.t1
chr2.3 CDS 49073376 49073464 49073376 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49072285 49072794 49072285 ID=MS.gene051209.t1.exon9;Parent=MS.gene051209.t1
chr2.3 CDS 49072285 49072794 49072285 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49071965 49072039 49071965 ID=MS.gene051209.t1.exon10;Parent=MS.gene051209.t1
chr2.3 CDS 49071965 49072039 49071965 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49071646 49071716 49071646 ID=MS.gene051209.t1.exon11;Parent=MS.gene051209.t1
chr2.3 CDS 49071646 49071716 49071646 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49071503 49071560 49071503 ID=MS.gene051209.t1.exon12;Parent=MS.gene051209.t1
chr2.3 CDS 49071503 49071560 49071503 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49070680 49070923 49070680 ID=MS.gene051209.t1.exon13;Parent=MS.gene051209.t1
chr2.3 CDS 49070680 49070923 49070680 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
chr2.3 exon 49069594 49070279 49069594 ID=MS.gene051209.t1.exon14;Parent=MS.gene051209.t1
chr2.3 CDS 49069594 49070279 49069594 ID=cds.MS.gene051209.t1;Parent=MS.gene051209.t1
Gene Sequence

>MS.gene051209

ATGGCAGCATCCAACAAGTTTGACGTATCTTCCACCAGCCCAGATAGACCTTTGTACACTGGGCAGCGAGGATCCCACATAGCTGCTTCATTAGATAGATCAGGTAGCTTTCGTGAAGGCATAGAAAATCCAATTTTGTCCTCTCTTCCAAACATGTCACGAAGCAGTTCTTCAGCGACACAAGGGGATGTGATGAACTTCTTCAGTTGTGTGCGTTTTGATCCAAAATTAGTTGCTTTAGATCATAAGTCTAATCGTCCCATGGATTATAAACGACATGTCAGTGCTGCTCTGGGAATTTCACCAGATGAATCTCCATCTAGTTATGCAAAAGGCAAGCAATTGACATCCATAGTACCAGAAGATATCAAAAGACTCAGGGATGGTTTACATGCAAACTTTAGGAGGGCAAGGTAGTTTTTTAAATGCTCTTTTACTTGCATTGAAGTTACAACTATTTAATAACATTGTACAACTCAACAGGGATCGTGCTAAAATGTTCAGTGAAGCCTTATCTAGATTCAACAAAGATTTCCCAAATATAAATTCAAAGAAGAGAGCTCGTTCGGAAAATTTTTCTACTGATCGTTCTAGTTTTACATTAAGTGATCGGCCAGTTTTGGGCCCAAACATAGGTAAAATTGGCATTCATGGTCATGCAGTAACGGGTAGTTTTGAACATGACCAGCAAAAGTTGGAAGAAAGAACCAAAACTGCTGTTCCAAACAAGCGCACTAGAACTTCTTTGGTTGATGTCAAGGTATTTCTCGTCTTTTGTGCCTCCTAATGGTATATCTTTGGTTTCTTGCTGCTCTCAACTTAATAATGCATGATAGTAAGCAATAATATATGACTATATATAAACCGAATTCATAAAATCCAAAAAGTTCGATATATCTTTGTCTGACATGAAGCCTGTTTTATGTTTGTCTTTGCATAAGTTGCGAATTATAACATTTTACCTCTGTTATTTGGTGGAATTACCACCTTATGTGTATAAACCTATTATAAAATTATGAGATGAATGGCTATGCACTATAAGTGTAATTTATTTTTACACATGCATCCAATCAAATCACCATGATGTCACTTTGTTATGTCAGTTCCTAAACTATCTCCATAAATGTTTACGTGGTAAGGTGTAATTGAATGCATGTGTCAAAAAGATTTATGCTGACTATTCTAAAATTATTTTTATGTTTATTGCATATATGTGTTTCACCCTTAAGCATGTATGTATGTATGTCTGTAAACTCTTTCATCCTTATTTTATTGTTTTCAAACTAAAAAAAAGATCAAACAAATAATACTTGTTTTGGAAAACAGTTTTGAAAAACTATTTTACCAAACAAATTTTAAAAACTAAATCCAAAACACAATCAAAGAAGTGTCGAATATTCTTTTATATTTTATGGTTTTTTTGTTTTAATATGGCTTTACAACTTTGTTTGTACTACTCTTTATATGGAGTGTCATATTACATATTAACTTGGTATGCTTCAAACTCTGTTGAGCAAATCTGACTTGGGGCGTGTTTAATTCTAGATGGATGTGCGGACTAATTCGCTCGTTAGGTCATCTGGAACTGTAGATAGAGAGAAGGATATCCTACGACTTGCTAATAATGGTACAGTTCATGGCGAGGAACGGATTTTTCCCATTGTAGGTGATGGTTGGGAAAAGTCTAAAACAAAGAAGAAGCGTTCAGGCATCAAACCAGACGGGTCTTCAAGTACAACATCGGCAAAACCTGTTAACAATTTCCAGGAAACTAAGCAAGGAATGCAACAAAGACTAGCCACTGATGCTCGGTCAAAATTGAGTAACGACTCTCATTCTTTCAGGTATGAGTGTAATTGTGTGCCTTTATCTTTTCATAAACAAAGAATCAGCTTATATATGCTCTGATAAAGTATTATTTAGCATTTTGAACTTCAAGTAGAGGAAAATTTTCAATGATTGTTCTTAGGATGAGGTTTTCATTGGCTGAATTCCATTGCTGGGTAAACTGTGATATTAGTACTACATGCACCAATTCAGGATGAATTAACAGTAATGTCCAATTTATACATAAAGAAGGGTTTGAAGCCTTTCACCATTTACAATATAAATGAAAAATTGAAATGACTTTCATTATTATTATTATTATTTTTTTTTTTTTATGATTGTATTTTGTCCATGAATGGAAGAGAATCCAATAAATTACCATTGGTAGACTGAGTACATTAGGTATCTATGCAATTTGGTCAATTTATTATTTGACATTAAATGACTATAGCACAGTAAAAAATTGACGTCATAAATACTGATAGAAAAAAAATTAACTTTAAAATTTACATTTTCAAACTACAATGTTTTATATTGGTTGAAAAAAGACAATGTGTATTAGTAGATTGCATTTAAACCACAATTAATGATGCAATGTACTAATACACTTTGTCTTTTCTCAGTCAGTGAAAATGTAAATTTTATATTACATTTTTTTTCCTATCAATATCTATGATGGCGATTTTTTATTGGCACTAGTCAACTAATGTCAAATAATAGTTGACTTAATTGCATAAATATTTGATATAATAAGAAAAACCAATTTCGTTTATAAATATTCCCCATGTATATAAATATTCTCCATATATATATATATATATATATTCCCAATGTATATAAATATTCTCCAATATATATTTGTTAAATATGTTTTTGTTTATTAGTACATTGCATCTAAATCACAATACGCATTGTGGTTTAGATGCAATGTACTAATAAACAAAAATATATTTAACCAATATATATATATATATATATATATATATATATATATATATATATATATTGTAATTAGTCTTCCAATGGTAGTTTGTTACCTATTACGTTTTAGGATATATACGTTGTATTTAAAAATTAAAAAAATAAACTAGAGAGCCGTTGCAAATTTTCCTTTTATGGCGAAAGGCTTAGTCTATAAATTGGACATTACTGTGAGGGATTATGCTCAATGATTTAAGTATCTTCAATGAGAGATGACATGTACATATTTTTTCTTCTTCTAATTTCGATTGATTTTCTCTAATTCTTAGGCTATGCATATGATATTTTCATGTATCTTTGTCTAGGTTGGGCCTTTCTAATGGATCCAGTAGAAAGGCCCAACCTAGACAAAGATACATGAAAATATCATATGCATAGCCTACAAATTATAGAAAATCAATCGGAATTCAGAAGAAGAAAAAATATGTACATGTCATCTCCCATTGAAGATACTTAAAATCATTGAGCATAATCACTCACAGTAATGTCCAATTTATAGACTAAGCCTTTCGCCATAAAAGGAAAATTTGCAACGGCTCTCTAGTTTATTATTTTAATTTTTAAATACAATGTATATATCCTAAAACGTAATTGGTAACAAACTACCATTGGAAGACCAAGTACAATGTATATATCCTAAAACGTAATTGGTTTTTCTTATTATATCAAATATTTATGCAATTTGGTCAACTTATTATTTGGCATTAGTCGACTATAGTGCCAATAAAGAATTGCCATCGTAAATATTGATCAGAAAAAAATATAATTTAAAAAATACATTTTAAATTATATTTTAAATTATATACATTGTACTTAGTCTTCCAATGGTAATTTGTTACCAATTACGTTTTAGGATATATACATTGTATTTAAAAATTAAAAAAATAAACAAATTTTCCTTTTATGGCGAAAGGCTTAGTCTATAAATTGGACATTACTGGAGAGATTATGCTCAATGATTTTAAGTATCTTCAATGGGAGATGACATGTAATTTTTTTTTCTTCTGAATTTCAATTGATTTTTTGTAATTTGTAGGCTATGCATATGAAAATTTCATGTATTTTGTCTAGGTTGGGCCTTCCTAATGGAACTGCTGGAGCTGGAAAATCAGATGGCATCTCTCAGCAAGCTGGGTTGGGCACACGCGTCTCTACTCCTAGAAATGACACCGATAGCAATTCTGCTGTCAGTGATAGGCGGGATCGTCCTCTTAATTCAGACAAGGAAAGGATGAATTTCAGAGCTGCTAACAAGTAAGCACACTGTAGAGCCTTATGATTTATTGATTCTGGAAAGAAAGCTTTATTTTATCCGTAGCAACAATTTTCCCCACATCATGTTCATATTGCCCCTTCCTTGCTTTTGCGGGGTTGTTCAGTTGTTTCATTTCCGTGTATTTGTCGATCCTTATGAACTGTCATCAGTATTGATAGTTACCTTCTTTATTGTGTTTTAATTCTTTAATTGATTAGATGTTTTGAATTAAGCAACTGCTCTAGGATAAGAATAAGTGGTTGGTTTCGTCTTTTTAAAGAGGTTTATGTTAGAAATTTGTTGTGGGATAGTGTAACTATAGTTTGTTGATGTTTATCGGTCCTAGTTGTTTACTTTTACTTTTTTCTTAAAGGATGATCTCTGTCTTTCTTTTGAACATATTTTATAATTGATAATTGATTTAGTTTTTATGTTTTTTATATTCCCAGGGCAACGGTCCGTGATGAATTCAATTCAACTAGCCCTAATTCAAGCGCAAAATTGAATACATCTATTCGGGCGCCACGATCAGGTTCAGGAGTTTCTGCTTCCAAGATGTCACCAGTTGTTAACAGAGAAACTGTTCCTAATGATTGGGAACTATCTAATTGTACCACTACAACCAAGCCCCCTGCTGGTGTTAGCACAAATAATCGCAAACGTGCAGCATCAGCGCGTTCATCTTCTCCACCTGTTGCCCCCCTCTGGCAGCCGCCACACAAGAGCTCCCGTACTGCCAGAAGAACAAATTTTATTCCCGTTGTTTCAAGTAATGCCGATTCCCCTGCTTTGGATTCTGTGTCTGATGCGTCTGGCAGTGATCTTGGGTTAGGAGTTGCCAAACGTTTGTCTGGCGGTTCTCCCCAGCAAATAAGATTAAAAGGCGATCCGTCATCTTCAGCTGCCTTCTCTGAAAGTGAAGAGTCAGGGGTGGCTGAGATGAAGCCTAAAGAGAAGGGCAGGAAACCGGATGGGATAGACCAGAAAGCTGGACAAAATGTTCAAAAGGTTTCTAACATGGTTCCTCCAACGAAAAAAAATAAGCTTGCATCCAGGGAAGAACGTGGAGACGGTGTTCGGAGGCAAGGAAGAACAGGGCGGAATTTTCCTGCTACAAGGTCATTGACGCCAATGACATCTGAGAAGCTTGGAAACATAGGGACCGTAAAGCAGCTCAGAAGTTCAAGACTAGGATTTGAAAAGAGTGAAAGGTTAGAATCCCTCTTTCTAAATCATTGCTACAGGGCCTGTTTGTGTTTTTTTAAAAGAACATATACCCTTTAATTATAGATTTATTTCCAAAAGTTATAAAAATTATGCAAGCTCTGAAGAAAGTATTGTGAAGTTGTTTATTTGGGAACGGACTAAAATCTTACTATGAAATCCGTGCAGCAAGGCAGGTCGTCCACCAACCAGGAAACTTTCTGATCGGAAGGCATATACTCGTCAAAAGCACTCAGCTATTAGTGCATCAGCAGATTTCCATGGTACTGGTTTAAGTGTCAAGAAAAACATATTGAAGTTAAATTTCCATTTGTAATACAGCTATATCATTATTCACTTTTGGTTTCGTTGATTTAGTAGGTCCAGAAGATGGACATGCAGAGCTAGTGGCTGCTGTAAAGGGTCTAATCAACTCTGGTATCAATCTTACTAAATACTATCTAAATGTGATACCTAAATACTTATTATCTGATGGAGTAGCTCTGACTTTTCTTATTACTGCAGGTCGTGCTATTACTGGCCAATTTTGGAAGCAGATGGAGCCTTTCTTCGGTATGATAATTGAGGAGGATGTTGCTTACTGGAAACAAAAGGTGTGAATCCTATCTTTGTTAGTCATTATTAGTGACAATTATTGTTACTATACTTTTTAAGAGTTTGTGTTAGGTCAATGCAGCATGACTCTTGTCTACCTTATCCATGTTTAGAGGTTTCACATGTAATAAAAGAGCACAATACAGCTGTGCTTTAAATTTGTCTTTTGTCCATGATATTATTGCACTTAGGTTGCCTTTGATTGATTATTTATAAATTAGACTCTAGTTTTTACTATAAATAAGTAAATGTTCCTTTTGTCTCGAATCTCCCTGATGTTACCTGGAACTATGACATTGGCTGTTATATAACATCAGGAGATTTGAGACAAAAGGAACATTTACTTATTTATAGTAAAAACTAGATTCTAATTTATAAATAATCAATCAAAGGCAACCTAAGTGCAATAATATCATGGATAAAAGACAAATTTGAAGCACCGCTGTATTGTGCTCTTTTATATTTTGATATATATTAAAAGTTTCGTCTCAGTTCTTGCATACATTATATTTGTTGTTAGTTATGATAATAGCATGATTTAGTTGATCCGGTTTTCTTCACTAATTTAGTCATCTTTCAGATAAATCTTGAGTCAAGCGGATTGATGCCAACTCCAGTTTCTTCAAATATAGATGATTGTGAAGCTGTTACTAATGGGTTAGGGTTGATGGGTTGTGCAAGAGATATCGGACATGATGCTCAAAGGGGTGCTGGAATTGTCGGTGAACAATCGCAACTAACTAAAGGGGATTGTAAAGCAATTCCCCTTTGTCAAAGGCTGTTATCTGCTTTAATTTCAGAGGAGGGTTGCAGTGGAAGTGAAAATTTCAATTTTGATGCATATGATACTCAATTTGAGACAAACGGGGAGTTGGAACTGAACCATCTGGATAGCCACCCGCTAGCTAATTATAACTTCACTGCTCATTCTGCTTGCAATGGTTATAGGACAACTCAGAAGCCAGAACATCATGATACTATAAATGATGTAGTTGATATTCCATCCAATGGGTTGGAATATGATGCCATGGATATGAATGAAAGGCTTCTCTTGGAGCTTCAAAGCATTGGAATTTCCCCAGACCCTGTGGTAAGTCACTTTCCTAATAACTTTTGTGCTATTTTTCATGACATCTTATTGTGGGAATGAACATTATCAGGTTTGGTTTAACTATATTTGTTCTAGTTTATTCTGCTATACTTTCAGTAGACTACTGATCAATAGATCTAATGAGTTTTTTTTTTCTTTTTCTTTTTCTTTTTCAAGTTCTGTCTATTATTGTTAAATATTGTATGTTTTTGTAGTACTGATTTTTTCTCTTTTAATTTTTCTAGCCTGAAATATCGCAAACAGATGATGTAGCAATATTCGACGATTTGACTGGGTTTGAGGAGAAATATCAAAGACAGGTACTAACTGATGTTGAATGTACTAATAATTGCTAGTCATCTAAATGTTTTTTTGCCAATATTTTTTTTATCATTACGTAATTTTTTAAAAACATTGCTTCTCAAATTCATGCTAATATCAGACTTTTTATTGAAGCAATATAGACCAGGCCTAGACATCTTATTTATGAACTTAATTCTGAACTTTATGGATGTGATTTTGATATTATATAATTGTCGTTGTAATTTTATTTTCATGTATACCGTAGGTTTTCAAGAAGAAAGACTTGCTAGAAGGGTTATTGAAATCTGCCTCAGTGACCAAAGAATGTCAAGAAAAGTAATTGCACTTCCATTTATGCCCTGATAATTTTCTGGATTTAAACCTTTGTTGCTCATTGCTGATGTAAAATTTTGATTAACAGGGATTTTGAGCAACGCGCTCTAGACAAACTTGTTGTGATGGCTTATGAGAAATACATGGTAACCCTCTTAAAGTTCAATATTACTTTTTTTATATAACCAGTTTTACAGTTTTAAAATAGTATTTTTGCACTCCAACCTAGTCAATTATCCCTCAGGCCAAGTGCTCTGTTACAATGGTTGAAAGGGGATCTTTTCATTGGACTAGGTATTAGGTAGTATGGACAGAGTGAAGACATGGTCTAAATCTGATTATTTAAGTATGCGACGGGAACTAGAACAAGGAACACATATAATGTATCATATGCCCTATATAAGTGTTGGTGATCCCAATCTCTATGACTTGTGTGGATTGTTGAGGTTATGGAAACCTACCATTTGCAACACAACCATTAATTACACTATTTTTTTTTTTTTGATTTTTTTTAATTCAGACTTGTGACCTGTTTGACCTATTTTATTTTAGTGTTCTATCATAGAAATCAGAATCCATACTCTGCATGAATATCTTTTTTAAAATTGTCTCGGAGTAAGAGTTAACACTCCATAGCCAAATGTAGATGCCATCATATTAGAAAATGTTCATTGTTTTATATTTAGGTTTCATGGCATAGTAAGTTGACAATAATTGGTTGGCAGGCTTGTTGGGGCCGCAATCCCTCAGGTGGGAGAAATACAAGCAGCAAAGTGGCCAAGCAAGCTGCATTGGGATTTGTTAAACGAACATTGGAGCGGTACCATCAATTTGAAGATACTGGCAAGAGCTGCTTCAACGAGCCTTTATTCAAGGATATGTTCTTTGCTGCTTCTTCCCAGCAAAGTGGCATGGAGGCTGAATCTGCAAAACCTCATGCTTCTTCTGTTTCTCTGGAAGCAAGAACAGGTATCCTGTTCAATATCTTCTTGAATAAATGGTCTAATCTATTATTTTGTATCTTGTTGTGTTTCCTATGATCATCTTAGCCAAAATCTCACATGGCTTTAAACCTTTAATTTATGCTTGTTTGTGCAATCCTGTCTACTCTCCTTGTCCATAATGATGTCTTCCCAATGAAATACTGCGACTAAGGCAAAAGGTACTGCCAGCTAAGAAAGTCAACTGGCGACTGAGAGGCGTCCTTTTTTCCTAGCTGTCAGTATTTTACTCCGTACATGATTTTGGACATATGGAGGGGCAAATGATTTCTATCCTTCATTGCCTGAACGGTTATATATAAGGTTTTATTCTCCACCCCTCCAAGTATAGACTAGATTTTAATTTTTAATTTGTATTTCTTCTGCAGGTTCCATTAGTTCACGGAGGAGCCCTTCACAATTTAGTCCGAACATGAATAATCATGATGTCAATTTATCAGATATTTATCCTGTTATAAACAACTCATCTGAACAGACAAGTGGGAAGGAAGATCTTTGGTCAAACAGGGGGAAGAAAAAGGAATTGTCCCTTGATGATGTCGGTGCTTCAAGTGTTCCATCGGGCATTAGAGGTTCTCTACCAAGCAGCACAAAAGGTAAGAGAAGTGAAAGAGACAGAGATGGAAAAGGGCAGAGCAGAGAAGTGCAATCCAGAAATGGAACTACCAAAGCCGGTAGGCCAGCACTCTCTAATACTAAAGGAGAAAGGAAACCCAAATCAAAGCCTAAGCAGAAAGCAGGTCAGCATTCTGTTTCTGTTAATGGCCTCCTTGGCAAGCTATCAGACCAACCTAAACCAGAATTGCCATCTGGTTCAAAATCAAATGAAAAGTCTAACAATAGCAATGCCAAGGAAAAGAATGAGTGTGCCCTGGGTGAAGATGAACCTATAGATTTGTCTAACCTGCAACTGCCTGGAATGGATGTGCTTGATGACCAAGGTCAGGATATTGGTTCGTGGTTGAATATTGATGATGATGGATTGCAAGAGGATGGGTTTATGGGCCTTGAAATTCCAATGGATGACCTTTCCGACTTGAACATGATGGTTTGA

Protein sequence

>MS.gene051209.t1

MAASNKFDVSSTSPDRPLYTGQRGSHIAASLDRSGSFREGIENPILSSLPNMSRSSSSATQGDVMNFFSCVRFDPKLVALDHKSNRPMDYKRHVSAALGISPDESPSSYAKGKQLTSIVPEDIKRLRDGLHANFRRARDRAKMFSEALSRFNKDFPNINSKKRARSENFSTDRSSFTLSDRPVLGPNIGKIGIHGHAVTGSFEHDQQKLEERTKTAVPNKRTRTSLVDVKMDVRTNSLVRSSGTVDREKDILRLANNGTVHGEERIFPIVGDGWEKSKTKKKRSGIKPDGSSSTTSAKPVNNFQETKQGMQQRLATDARSKLSNDSHSFRLGLPNGTAGAGKSDGISQQAGLGTRVSTPRNDTDSNSAVSDRRDRPLNSDKERMNFRAANKATVRDEFNSTSPNSSAKLNTSIRAPRSGSGVSASKMSPVVNRETVPNDWELSNCTTTTKPPAGVSTNNRKRAASARSSSPPVAPLWQPPHKSSRTARRTNFIPVVSSNADSPALDSVSDASGSDLGLGVAKRLSGGSPQQIRLKGDPSSSAAFSESEESGVAEMKPKEKGRKPDGIDQKAGQNVQKVSNMVPPTKKNKLASREERGDGVRRQGRTGRNFPATRSLTPMTSEKLGNIGTVKQLRSSRLGFEKSESKAGRPPTRKLSDRKAYTRQKHSAISASADFHVGPEDGHAELVAAVKGLINSGRAITGQFWKQMEPFFGMIIEEDVAYWKQKINLESSGLMPTPVSSNIDDCEAVTNGLGLMGCARDIGHDAQRGAGIVGEQSQLTKGDCKAIPLCQRLLSALISEEGCSGSENFNFDAYDTQFETNGELELNHLDSHPLANYNFTAHSACNGYRTTQKPEHHDTINDVVDIPSNGLEYDAMDMNERLLLELQSIGISPDPVPEISQTDDVAIFDDLTGFEEKYQRQVFKKKDLLEGLLKSASVTKECQEKDFEQRALDKLVVMAYEKYMACWGRNPSGGRNTSSKVAKQAALGFVKRTLERYHQFEDTGKSCFNEPLFKDMFFAASSQQSGMEAESAKPHASSVSLEARTGSISSRRSPSQFSPNMNNHDVNLSDIYPVINNSSEQTSGKEDLWSNRGKKKELSLDDVGASSVPSGIRGSLPSSTKGKRSERDRDGKGQSREVQSRNGTTKAGRPALSNTKGERKPKSKPKQKAGQHSVSVNGLLGKLSDQPKPELPSGSKSNEKSNNSNAKEKNECALGEDEPIDLSNLQLPGMDVLDDQGQDIGSWLNIDDDGLQEDGFMGLEIPMDDLSDLNMMV