Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29411.t1 | XP_024633839.1 | 95.7 | 490 | 21 | 0 | 1 | 490 | 1 | 490 | 3.00E-256 | 894 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29411.t1 | O48791 | 71.2 | 490 | 137 | 2 | 1 | 486 | 1 | 490 | 1.2e-187 | 657.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29411.t1 | A0A396IPJ6 | 95.7 | 490 | 21 | 0 | 1 | 490 | 1 | 490 | 2.2e-256 | 894.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29411 | MS.gene017694 | PPI |
| MS.gene29411 | MS.gene013971 | PPI |
| MS.gene29411 | MS.gene58836 | PPI |
| MS.gene29411 | MS.gene38829 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29411.t1 | MTR_3g045180 | 93.775 | 498 | 23 | 1 | 1 | 490 | 1 | 498 | 0.0 | 955 |
| MS.gene29411.t1 | MTR_5g088860 | 83.707 | 491 | 76 | 2 | 1 | 487 | 1 | 491 | 0.0 | 847 |
| MS.gene29411.t1 | MTR_5g088860 | 83.707 | 491 | 76 | 2 | 1 | 487 | 23 | 513 | 0.0 | 847 |
| MS.gene29411.t1 | MTR_7g089090 | 58.197 | 488 | 198 | 3 | 1 | 483 | 1 | 487 | 0.0 | 575 |
| MS.gene29411.t1 | MTR_6g079040 | 64.228 | 123 | 42 | 2 | 86 | 207 | 41 | 162 | 3.26e-38 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29411.t1 | AT2G26770 | 73.887 | 494 | 121 | 3 | 1 | 488 | 1 | 492 | 0.0 | 754 |
| MS.gene29411.t1 | AT2G26770 | 73.887 | 494 | 121 | 3 | 1 | 488 | 1 | 492 | 0.0 | 754 |
| MS.gene29411.t1 | AT2G26770 | 73.887 | 494 | 121 | 3 | 1 | 488 | 1 | 492 | 0.0 | 754 |
| MS.gene29411.t1 | AT2G40820 | 54.352 | 471 | 208 | 3 | 19 | 483 | 47 | 516 | 0.0 | 522 |
| MS.gene29411.t1 | AT2G40820 | 54.352 | 471 | 208 | 3 | 19 | 483 | 22 | 491 | 0.0 | 522 |
| MS.gene29411.t1 | AT2G40820 | 54.352 | 471 | 208 | 3 | 19 | 483 | 34 | 503 | 0.0 | 522 |
| MS.gene29411.t1 | AT2G40820 | 54.352 | 471 | 208 | 3 | 19 | 483 | 22 | 491 | 0.0 | 522 |
| MS.gene29411.t1 | AT3G56480 | 55.794 | 466 | 198 | 4 | 25 | 483 | 25 | 489 | 3.47e-180 | 514 |
| MS.gene29411.t1 | AT2G40820 | 53.403 | 382 | 175 | 2 | 104 | 483 | 1 | 381 | 5.03e-147 | 426 |
Find 98 sgRNAs with CRISPR-Local
Find 472 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATTTCCTACTTACAAAAT+TGG | 0.176588 | 3.3:+31537604 | MS.gene29411:CDS |
| CTGCGGCGCAGGCACTATTT+TGG | 0.185288 | 3.3:+31544091 | MS.gene29411:CDS |
| CCTCATTTATATGAATTAGA+AGG | 0.272590 | 3.3:+31541303 | MS.gene29411:CDS |
| TCCTTCATCGATAGCACTTT+CGG | 0.275084 | 3.3:-31537652 | None:intergenic |
| GATGGGTTGGAATCCTTAAA+AGG | 0.280491 | 3.3:+31537960 | MS.gene29411:CDS |
| GATGATGTGAATCATTTGTC+TGG | 0.288215 | 3.3:-31543766 | None:intergenic |
| CGTCCAACGTCAAAAGGTTC+TGG | 0.297621 | 3.3:-31543135 | None:intergenic |
| TGAACTCGAATAGAATTCTT+TGG | 0.297696 | 3.3:-31543861 | None:intergenic |
| CCTTCATCGATAGCACTTTC+GGG | 0.304015 | 3.3:-31537651 | None:intergenic |
| TGTACACGAAGCTATTTCTT+TGG | 0.342988 | 3.3:+31538010 | MS.gene29411:CDS |
| ACAAGGATGACCCGCAGTTT+TGG | 0.345696 | 3.3:+31537523 | MS.gene29411:CDS |
| GCGGGTGGCGGGAAGAAATA+AGG | 0.347173 | 3.3:+31537983 | MS.gene29411:CDS |
| ATTGAACATTCTGAAAGTTC+GGG | 0.352004 | 3.3:-31541378 | None:intergenic |
| AATTGAACATTCTGAAAGTT+CGG | 0.353771 | 3.3:-31541379 | None:intergenic |
| AACACGAGCTTCAAGCATTA+AGG | 0.356617 | 3.3:+31541036 | MS.gene29411:CDS |
| CCACTCTTTGAACTGCTGCC+CGG | 0.360438 | 3.3:-31539524 | None:intergenic |
| TTGCAGTTCAGTTAACTCAT+AGG | 0.368181 | 3.3:+31538794 | MS.gene29411:CDS |
| GAGAGAATGTCTCAAACTTC+AGG | 0.371204 | 3.3:+31539567 | MS.gene29411:CDS |
| TTCTGGGGCATAAACTGATT+TGG | 0.372582 | 3.3:-31543118 | None:intergenic |
| ATCACCCGAAAATGCCAAAA+AGG | 0.374989 | 3.3:+31541416 | MS.gene29411:CDS |
| CACTCTTTGAACTGCTGCCC+GGG | 0.388647 | 3.3:-31539523 | None:intergenic |
| GTAGCCAAACCTGGTTCAAT+TGG | 0.395153 | 3.3:-31543216 | None:intergenic |
| TCCCACATTAAGTATATGAA+TGG | 0.411218 | 3.3:-31543798 | None:intergenic |
| CTTTGTGGAGTTCGAGGAGG+TGG | 0.411973 | 3.3:+31544063 | MS.gene29411:CDS |
| TCCTTAAAAGGGCGGGTGGC+GGG | 0.420523 | 3.3:+31537972 | MS.gene29411:CDS |
| CTTCAGCTTTGTGGAGTTCG+AGG | 0.431632 | 3.3:+31544057 | MS.gene29411:intron |
| AGGTGGGAATGCTGCGGCGC+AGG | 0.440198 | 3.3:+31544080 | MS.gene29411:CDS |
| ACAAAAGAGAGTCCTTGCTT+TGG | 0.450797 | 3.3:-31544117 | None:intergenic |
| TGCTAAGAAACTTGTATATG+AGG | 0.457477 | 3.3:+31539467 | MS.gene29411:CDS |
| CATTTGAATCAGAGAGAGAA+AGG | 0.460633 | 3.3:+31544145 | MS.gene29411:CDS |
| AAAGAAGATCAGAGATGGGT+TGG | 0.465534 | 3.3:+31537947 | MS.gene29411:CDS |
| TGAGAATGAAGCTTTGTAAA+GGG | 0.466239 | 3.3:+31543825 | MS.gene29411:CDS |
| AGTATATGAATGGATTCAGT+TGG | 0.467239 | 3.3:-31543788 | None:intergenic |
| GTCCAACGTCAAAAGGTTCT+GGG | 0.473124 | 3.3:-31543134 | None:intergenic |
| TTAGAAGGGACTGAAACATT+AGG | 0.479469 | 3.3:+31541318 | MS.gene29411:CDS |
| GATTCATTTGTAGGCTTCTG+AGG | 0.480823 | 3.3:+31539443 | MS.gene29411:intron |
| ATCCTTAAAAGGGCGGGTGG+CGG | 0.480854 | 3.3:+31537971 | MS.gene29411:CDS |
| TGCAGTTCAGTTAACTCATA+GGG | 0.484553 | 3.3:+31538795 | MS.gene29411:CDS |
| ATGAGAATGAAGCTTTGTAA+AGG | 0.488741 | 3.3:+31543824 | MS.gene29411:CDS |
| TAGTAAATTTGAGAAGGGTT+TGG | 0.490035 | 3.3:+31537741 | MS.gene29411:CDS |
| ATCCATTCATATACTTAATG+TGG | 0.494470 | 3.3:+31543796 | MS.gene29411:CDS |
| CTCATTTATATGAATTAGAA+GGG | 0.497583 | 3.3:+31541304 | MS.gene29411:CDS |
| TGGATCTAATAATCAGATCA+TGG | 0.501525 | 3.3:+31537624 | MS.gene29411:CDS |
| TAATTGCAGATTGTTCTAGC+TGG | 0.505097 | 3.3:+31544327 | MS.gene29411:intron |
| CAAGTTTGTATTATTTCAGA+AGG | 0.506009 | 3.3:+31543165 | MS.gene29411:CDS |
| ATTCTATTCGAGTTCAATGC+AGG | 0.509177 | 3.3:+31543868 | MS.gene29411:CDS |
| AGCAGTTCAAAGAGTGGAGG+AGG | 0.517740 | 3.3:+31539530 | MS.gene29411:CDS |
| CAAGTCCATCATGTTTCTGA+AGG | 0.520285 | 3.3:-31544366 | None:intergenic |
| ACCTGGTTCAATTGGACCGA+TGG | 0.521770 | 3.3:-31543208 | None:intergenic |
| AATATGCGTCCAACGTCAAA+AGG | 0.523688 | 3.3:-31543141 | None:intergenic |
| CTTGCTAGTAAATTTGAGAA+GGG | 0.528068 | 3.3:+31537736 | MS.gene29411:CDS |
| TTTCAGAATGTTCAATTCAG+TGG | 0.532345 | 3.3:+31541385 | MS.gene29411:CDS |
| CCCGAAAGTGCTATCGATGA+AGG | 0.534861 | 3.3:+31537651 | MS.gene29411:CDS |
| GTCTCAAACTTCAGGAAACC+AGG | 0.541401 | 3.3:+31539575 | MS.gene29411:CDS |
| CCTTGCTAGTAAATTTGAGA+AGG | 0.543952 | 3.3:+31537735 | MS.gene29411:CDS |
| AAACTCCTTCAGAAACATGA+TGG | 0.544547 | 3.3:+31544361 | MS.gene29411:CDS |
| GGACTTGGAACAATTAATGA+AGG | 0.548634 | 3.3:+31540380 | MS.gene29411:intron |
| CCTTCTCAAATTTACTAGCA+AGG | 0.554709 | 3.3:-31537735 | None:intergenic |
| TTCAGTTAACTCATAGGGAA+GGG | 0.556887 | 3.3:+31538800 | MS.gene29411:CDS |
| ATGGGTTGGAATCCTTAAAA+GGG | 0.558486 | 3.3:+31537961 | MS.gene29411:CDS |
| CAGTTGGCAAGGGAAAAGAA+AGG | 0.562244 | 3.3:+31541267 | MS.gene29411:intron |
| TGCTGCTAAGTTGTCTGAAG+AGG | 0.562336 | 3.3:+31537768 | MS.gene29411:CDS |
| TCCATTCATATACTTAATGT+GGG | 0.569079 | 3.3:+31543797 | MS.gene29411:CDS |
| ACGCGAAACTGCACAGCTGT+TGG | 0.571348 | 3.3:+31537684 | MS.gene29411:CDS |
| CCTTCTAATTCATATAAATG+AGG | 0.579496 | 3.3:-31541303 | None:intergenic |
| GGCAGCAGTTCAAAGAGTGG+AGG | 0.581141 | 3.3:+31539527 | MS.gene29411:CDS |
| CATAGTGTCACCAAAACTGC+GGG | 0.582763 | 3.3:-31537533 | None:intergenic |
| ACCATCGGTCCAATTGAACC+AGG | 0.588362 | 3.3:+31543207 | MS.gene29411:CDS |
| ATTAATGAAGGAGGTTCAAG+AGG | 0.588663 | 3.3:+31540392 | MS.gene29411:CDS |
| GTTCAGTTAACTCATAGGGA+AGG | 0.590453 | 3.3:+31538799 | MS.gene29411:CDS |
| TCAGTTAACTCATAGGGAAG+GGG | 0.591057 | 3.3:+31538801 | MS.gene29411:CDS |
| ATGATGAGAGATACCTTGCT+TGG | 0.592908 | 3.3:-31540441 | None:intergenic |
| ATGATGTGAATCATTTGTCT+GGG | 0.597530 | 3.3:-31543765 | None:intergenic |
| GTTGGAATCCTTAAAAGGGC+GGG | 0.598527 | 3.3:+31537965 | MS.gene29411:CDS |
| GGCAAGGGAAAAGAAAGGAG+AGG | 0.600428 | 3.3:+31541272 | MS.gene29411:CDS |
| CAGCTTTGTGGAGTTCGAGG+AGG | 0.602632 | 3.3:+31544060 | MS.gene29411:intron |
| ATGCAGCTATCATGCTTGCA+AGG | 0.603055 | 3.3:+31544169 | MS.gene29411:CDS |
| TTTGTGGAGTTCGAGGAGGT+GGG | 0.607486 | 3.3:+31544064 | MS.gene29411:CDS |
| CTTGGAACAATTAATGAAGG+AGG | 0.607672 | 3.3:+31540383 | MS.gene29411:CDS |
| TGACACTATGATGATGCATA+AGG | 0.614210 | 3.3:+31537546 | MS.gene29411:CDS |
| AGGGGAGCTAGTACAACAGA+AGG | 0.616255 | 3.3:+31538819 | MS.gene29411:CDS |
| ATGAGTTAACTGAACTGCAA+GGG | 0.627954 | 3.3:-31538791 | None:intergenic |
| CAGATCACACTGTCAACCAT+CGG | 0.628663 | 3.3:+31543192 | MS.gene29411:CDS |
| GCTAGTACAACAGAAGGCTG+AGG | 0.635371 | 3.3:+31538825 | MS.gene29411:CDS |
| TTGAACATTCTGAAAGTTCG+GGG | 0.637142 | 3.3:-31541377 | None:intergenic |
| TATGAGTTAACTGAACTGCA+AGG | 0.638190 | 3.3:-31538792 | None:intergenic |
| AATGCTGCATCAGCCAAGCA+AGG | 0.639243 | 3.3:+31540428 | MS.gene29411:CDS |
| TCGAGGAGGTGGGAATGCTG+CGG | 0.640974 | 3.3:+31544074 | MS.gene29411:CDS |
| CCGGGCAGCAGTTCAAAGAG+TGG | 0.642685 | 3.3:+31539524 | MS.gene29411:CDS |
| TCCAACGTCAAAAGGTTCTG+GGG | 0.650573 | 3.3:-31543133 | None:intergenic |
| GGTTGGAATCCTTAAAAGGG+CGG | 0.659287 | 3.3:+31537964 | MS.gene29411:CDS |
| TGAACATTCTGAAAGTTCGG+GGG | 0.661686 | 3.3:-31541376 | None:intergenic |
| GGAATCCTTAAAAGGGCGGG+TGG | 0.666667 | 3.3:+31537968 | MS.gene29411:CDS |
| CAGCTATCATGCTTGCAAGG+AGG | 0.667212 | 3.3:+31544172 | MS.gene29411:CDS |
| TATGATGATGCATAAGGACG+TGG | 0.671817 | 3.3:+31537552 | MS.gene29411:CDS |
| TGGTTTGGGAAACTATGTAG+AGG | 0.678930 | 3.3:+31543405 | MS.gene29411:CDS |
| TCATAGTGTCACCAAAACTG+CGG | 0.680285 | 3.3:-31537534 | None:intergenic |
| GAAAGTGCTATCGATGAAGG+AGG | 0.682437 | 3.3:+31537654 | MS.gene29411:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTCTTTATAAATAAAGA+AGG | - | chr3.3:31542954-31542973 | None:intergenic | 10.0% |
| !!! | ACAATAATTTATAGAATTTT+AGG | + | chr3.3:31542241-31542260 | MS.gene29411:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3.3:31541784-31541803 | MS.gene29411:intron | 100.0% |
| !! | AAAACAGAAAGAAAAAAAAA+AGG | - | chr3.3:31540612-31540631 | None:intergenic | 15.0% |
| !! | ACAATACTTCAATTATTTAT+CGG | - | chr3.3:31539037-31539056 | None:intergenic | 15.0% |
| !! | TCATAAACAATAAACAAATA+TGG | - | chr3.3:31540677-31540696 | None:intergenic | 15.0% |
| !! | TTAAAAACAGTATTTATAAC+AGG | - | chr3.3:31543940-31543959 | None:intergenic | 15.0% |
| !!! | AATACTGTTTTTAACATTTT+CGG | + | chr3.3:31543946-31543965 | MS.gene29411:intron | 15.0% |
| !!! | AATCATTGATTATTTCAATT+TGG | - | chr3.3:31537831-31537850 | None:intergenic | 15.0% |
| !!! | AATGATTATAATAATTTGCA+AGG | + | chr3.3:31537844-31537863 | MS.gene29411:intron | 15.0% |
| !!! | ACTTTTTTATCATTATTTTG+AGG | + | chr3.3:31540966-31540985 | MS.gene29411:intron | 15.0% |
| !!! | ATATTTTCTACAATAATGTT+TGG | - | chr3.3:31542165-31542184 | None:intergenic | 15.0% |
| !!! | GAAAAATTCATTTCTTTTTA+CGG | + | chr3.3:31540042-31540061 | MS.gene29411:intron | 15.0% |
| !!! | TTAATAAAATTTAGTTCTGT+GGG | + | chr3.3:31540350-31540369 | MS.gene29411:intron | 15.0% |
| !!! | TTTAATAAAATTTAGTTCTG+TGG | + | chr3.3:31540349-31540368 | MS.gene29411:intron | 15.0% |
| !! | AAAAATAAATTACCCTAGTA+AGG | + | chr3.3:31542810-31542829 | MS.gene29411:intron | 20.0% |
| !! | AAAATCGAGAAAAAGTAATT+AGG | + | chr3.3:31541668-31541687 | MS.gene29411:intron | 20.0% |
| !! | AAAGACCAAACAAATTTAAA+AGG | - | chr3.3:31543478-31543497 | None:intergenic | 20.0% |
| !! | AAATATCAATTGATACATCA+CGG | - | chr3.3:31540294-31540313 | None:intergenic | 20.0% |
| !! | AACGTAATGATCAAATAAAA+AGG | - | chr3.3:31539313-31539332 | None:intergenic | 20.0% |
| !! | AGGGAAAAATATTATGATTA+TGG | + | chr3.3:31540844-31540863 | MS.gene29411:intron | 20.0% |
| !! | ATTGATGTTATATCATTATC+AGG | + | chr3.3:31543034-31543053 | MS.gene29411:intron | 20.0% |
| !! | ATTTCAAAGAACTTGTAATT+AGG | + | chr3.3:31538475-31538494 | MS.gene29411:intron | 20.0% |
| !! | CAATACTTCAATTATTTATC+GGG | - | chr3.3:31539036-31539055 | None:intergenic | 20.0% |
| !! | CTCATTTATATGAATTAGAA+GGG | + | chr3.3:31541304-31541323 | MS.gene29411:CDS | 20.0% |
| !! | GAAAGAAAGAATTGAATAAT+CGG | + | chr3.3:31539146-31539165 | MS.gene29411:intron | 20.0% |
| !! | GAGAATATACATAATGAAAA+AGG | - | chr3.3:31540171-31540190 | None:intergenic | 20.0% |
| !! | TTATTTCAATTTGGAAAGTT+AGG | - | chr3.3:31537822-31537841 | None:intergenic | 20.0% |
| !! | TTTAATTCCTATTTGTGAAA+TGG | + | chr3.3:31539349-31539368 | MS.gene29411:intron | 20.0% |
| !! | TTTCAAAGAACTTGTAATTA+GGG | + | chr3.3:31538476-31538495 | MS.gene29411:intron | 20.0% |
| !!! | AATTTTAGGAAACAAATGAT+AGG | + | chr3.3:31542255-31542274 | MS.gene29411:intron | 20.0% |
| !!! | ACAAAATATCATTTTAGAAG+AGG | + | chr3.3:31541644-31541663 | MS.gene29411:intron | 20.0% |
| !!! | ACAATCCTTTTAAATTTGTT+TGG | + | chr3.3:31543470-31543489 | MS.gene29411:intron | 20.0% |
| !!! | ATTTTAGGAAACAAATGATA+GGG | + | chr3.3:31542256-31542275 | MS.gene29411:intron | 20.0% |
| !!! | CAAAATATCATTTTAGAAGA+GGG | + | chr3.3:31541645-31541664 | MS.gene29411:intron | 20.0% |
| !!! | TCTCTTTTTATAAACTAGAA+GGG | - | chr3.3:31541707-31541726 | None:intergenic | 20.0% |
| !!! | TGATTAAATTTTACGGAAAA+AGG | - | chr3.3:31540069-31540088 | None:intergenic | 20.0% |
| !!! | TTCTCTTTTTATAAACTAGA+AGG | - | chr3.3:31541708-31541727 | None:intergenic | 20.0% |
| !!! | TTCTTTCTGTTTTTTTGTTA+AGG | + | chr3.3:31540619-31540638 | MS.gene29411:intron | 20.0% |
| !!! | TTTGTTAATTTTCTCATTCT+GGG | - | chr3.3:31541629-31541648 | None:intergenic | 20.0% |
| !!! | TTTTGTTAATTTTCTCATTC+TGG | - | chr3.3:31541630-31541649 | None:intergenic | 20.0% |
| ! | AAAAGAAACAAGCAAAAATC+TGG | - | chr3.3:31539932-31539951 | None:intergenic | 25.0% |
| ! | AAACTAATGCCATATTTGTT+AGG | + | chr3.3:31544251-31544270 | MS.gene29411:intron | 25.0% |
| ! | AAAGAATCCATTTCACAAAT+AGG | - | chr3.3:31539359-31539378 | None:intergenic | 25.0% |
| ! | AAAGTTTATAAGGGAATTCT+TGG | + | chr3.3:31541941-31541960 | MS.gene29411:intron | 25.0% |
| ! | AAATCAGTGATAACTTAGAA+TGG | - | chr3.3:31541230-31541249 | None:intergenic | 25.0% |
| ! | AAGAATATAGGGGATATTAA+GGG | + | chr3.3:31541735-31541754 | MS.gene29411:intron | 25.0% |
| ! | AATAGGAATTAAACATTGAG+AGG | - | chr3.3:31538991-31539010 | None:intergenic | 25.0% |
| ! | AATCCTTCAAAGTTAAAAGT+TGG | - | chr3.3:31539633-31539652 | None:intergenic | 25.0% |
| ! | ACAAAAACGTGTTACATAAA+AGG | - | chr3.3:31543084-31543103 | None:intergenic | 25.0% |
| ! | ACGTTTCTTTGATTAAATTG+AGG | + | chr3.3:31541187-31541206 | MS.gene29411:intron | 25.0% |
| ! | AGAAAGAAACCAAGAATATA+GGG | + | chr3.3:31541724-31541743 | MS.gene29411:intron | 25.0% |
| ! | AGGATATCAGAAAGTTTATA+AGG | + | chr3.3:31541931-31541950 | MS.gene29411:intron | 25.0% |
| ! | AGTTATACTTTGTGTCATAT+CGG | + | chr3.3:31542517-31542536 | MS.gene29411:intron | 25.0% |
| ! | AGTTATATTCAATACTTTGC+AGG | + | chr3.3:31543733-31543752 | MS.gene29411:intron | 25.0% |
| ! | ATACTTGTAAGTTCATGAAT+AGG | - | chr3.3:31542729-31542748 | None:intergenic | 25.0% |
| ! | ATAGGAATTAAACATTGAGA+GGG | - | chr3.3:31538990-31539009 | None:intergenic | 25.0% |
| ! | ATCCATTCATATACTTAATG+TGG | + | chr3.3:31543796-31543815 | MS.gene29411:CDS | 25.0% |
| ! | ATCCTTCAAAGTTAAAAGTT+GGG | - | chr3.3:31539632-31539651 | None:intergenic | 25.0% |
| ! | ATGTCTATATTGTTTGATTG+TGG | + | chr3.3:31537873-31537892 | MS.gene29411:intron | 25.0% |
| ! | ATTAATGGAATGAGAAATTG+TGG | + | chr3.3:31539724-31539743 | MS.gene29411:intron | 25.0% |
| ! | ATTACACAGTTCTTTCAAAT+AGG | - | chr3.3:31539008-31539027 | None:intergenic | 25.0% |
| ! | CAAATTATAAGAGGGAAAAA+AGG | - | chr3.3:31543501-31543520 | None:intergenic | 25.0% |
| ! | CAAGTTTGTATTATTTCAGA+AGG | + | chr3.3:31543165-31543184 | MS.gene29411:CDS | 25.0% |
| ! | CATAACAATTTCTGTTTGTA+AGG | + | chr3.3:31542064-31542083 | MS.gene29411:intron | 25.0% |
| ! | CCTCATTTATATGAATTAGA+AGG | + | chr3.3:31541303-31541322 | MS.gene29411:CDS | 25.0% |
| ! | CCTTCTAATTCATATAAATG+AGG | - | chr3.3:31541306-31541325 | None:intergenic | 25.0% |
| ! | CGTTACTAGATGAATTAAAA+TGG | - | chr3.3:31542034-31542053 | None:intergenic | 25.0% |
| ! | CTCTTCAATAATCAAAATAC+TGG | + | chr3.3:31540232-31540251 | MS.gene29411:intron | 25.0% |
| ! | GGATATCAGAAAGTTTATAA+GGG | + | chr3.3:31541932-31541951 | MS.gene29411:intron | 25.0% |
| ! | TAAATTTGTGGAGAAATTTG+TGG | + | chr3.3:31540006-31540025 | MS.gene29411:intron | 25.0% |
| ! | TACATATTTGTGCAAGTTAA+TGG | - | chr3.3:31542998-31543017 | None:intergenic | 25.0% |
| ! | TATTAAGTAGTCAACAAGAA+TGG | + | chr3.3:31543260-31543279 | MS.gene29411:intron | 25.0% |
| ! | TCCAATTATATCTTTAGATG+CGG | - | chr3.3:31542476-31542495 | None:intergenic | 25.0% |
| ! | TCCATTCATATACTTAATGT+GGG | + | chr3.3:31543797-31543816 | MS.gene29411:CDS | 25.0% |
| ! | TGCTAAAATCCTAACAAATA+TGG | - | chr3.3:31544263-31544282 | None:intergenic | 25.0% |
| ! | TGTCTATATTGTTTGATTGT+GGG | + | chr3.3:31537874-31537893 | MS.gene29411:intron | 25.0% |
| ! | TGTCTTGAAATAATTCTGTT+GGG | + | chr3.3:31539855-31539874 | MS.gene29411:intron | 25.0% |
| ! | TTACTATTGAAAGATATCAG+CGG | - | chr3.3:31540756-31540775 | None:intergenic | 25.0% |
| ! | TTCAAAGAACTTGTAATTAG+GGG | + | chr3.3:31538477-31538496 | MS.gene29411:intron | 25.0% |
| ! | TTCAAGGTATATATTCCATT+CGG | - | chr3.3:31542561-31542580 | None:intergenic | 25.0% |
| ! | TTTCGAAACTGATCAATTAA+TGG | + | chr3.3:31539709-31539728 | MS.gene29411:intron | 25.0% |
| !! | AAGTCTTTGAGAATGAATAA+TGG | + | chr3.3:31538590-31538609 | MS.gene29411:intron | 25.0% |
| !! | AATTGAACATTCTGAAAGTT+CGG | - | chr3.3:31541382-31541401 | None:intergenic | 25.0% |
| !! | AGTCTTTGAGAATGAATAAT+GGG | + | chr3.3:31538591-31538610 | MS.gene29411:intron | 25.0% |
| !! | ATGATAATTGACTCTGTTTA+AGG | - | chr3.3:31542659-31542678 | None:intergenic | 25.0% |
| !! | ATGCTTTTGCAAATTATAAG+AGG | - | chr3.3:31543510-31543529 | None:intergenic | 25.0% |
| !! | TAACTTGCACAAATATGTAA+AGG | + | chr3.3:31542999-31543018 | MS.gene29411:intron | 25.0% |
| !! | TAATCATTTTATTGCTTCTC+TGG | + | chr3.3:31540083-31540102 | MS.gene29411:intron | 25.0% |
| !! | TAATGTTTGGAACCAAAAAA+AGG | - | chr3.3:31542152-31542171 | None:intergenic | 25.0% |
| !! | TGATAATTGACTCTGTTTAA+GGG | - | chr3.3:31542658-31542677 | None:intergenic | 25.0% |
| !! | TGCTTTTGCAAATTATAAGA+GGG | - | chr3.3:31543509-31543528 | None:intergenic | 25.0% |
| !! | TTAGATCCAATTTTGTAAGT+AGG | - | chr3.3:31537613-31537632 | None:intergenic | 25.0% |
| !!! | AAAAGCATTTTAGGTGATTA+CGG | + | chr3.3:31538372-31538391 | MS.gene29411:intron | 25.0% |
| !!! | AACTTCTTCAATCTCTTTTT+TGG | + | chr3.3:31538885-31538904 | MS.gene29411:intron | 25.0% |
| !!! | ACTTTTAACTTTGAAGGATT+AGG | + | chr3.3:31539633-31539652 | MS.gene29411:intron | 25.0% |
| !!! | GTATTTCTTCTACCTTTTTT+TGG | + | chr3.3:31542137-31542156 | MS.gene29411:intron | 25.0% |
| !!! | GTTTCTATTTTGCTTTTCAA+GGG | + | chr3.3:31541500-31541519 | MS.gene29411:intron | 25.0% |
| !!! | GTTTTAGCAAAAAGCATTTT+AGG | + | chr3.3:31538363-31538382 | MS.gene29411:intron | 25.0% |
| !!! | TTGATTTCTGATTGACTTTT+AGG | + | chr3.3:31541001-31541020 | MS.gene29411:intron | 25.0% |
| !!! | TTTTAAAGAAGATCAGAGAT+GGG | + | chr3.3:31537943-31537962 | MS.gene29411:CDS | 25.0% |
| AAAAGGAAATACAATGAACC+TGG | - | chr3.3:31539596-31539615 | None:intergenic | 30.0% | |
| AACGTGTTACATAAAAGGAA+AGG | - | chr3.3:31543079-31543098 | None:intergenic | 30.0% | |
| AAGTGCAAGATATTCTATGA+AGG | + | chr3.3:31540797-31540816 | MS.gene29411:intron | 30.0% | |
| AATCTGTCTATTGACCTATT+GGG | + | chr3.3:31539270-31539289 | MS.gene29411:intron | 30.0% | |
| AATTCTTTGAATTAGCCGAA+TGG | + | chr3.3:31542543-31542562 | MS.gene29411:intron | 30.0% | |
| ACAATCTGCAATTAAGGTAT+TGG | - | chr3.3:31544321-31544340 | None:intergenic | 30.0% | |
| ACAATGACACTAATGTCAAA+AGG | + | chr3.3:31538957-31538976 | MS.gene29411:intron | 30.0% | |
| ACATGTATAATTGGTTGAAG+GGG | + | chr3.3:31541765-31541784 | MS.gene29411:intron | 30.0% | |
| ACTCTTTAACAATGACAATG+CGG | - | chr3.3:31538094-31538113 | None:intergenic | 30.0% | |
| AGAATATAGGGGATATTAAG+GGG | + | chr3.3:31541736-31541755 | MS.gene29411:intron | 30.0% | |
| AGAGATAACAGAAAAAGAAC+AGG | + | chr3.3:31541821-31541840 | MS.gene29411:intron | 30.0% | |
| ATAATACGCTTCTCAATTTG+CGG | - | chr3.3:31539118-31539137 | None:intergenic | 30.0% | |
| ATGATAGTCTTTCTTGATTG+CGG | + | chr3.3:31538219-31538238 | MS.gene29411:intron | 30.0% | |
| ATGATGTGAATCATTTGTCT+GGG | - | chr3.3:31543768-31543787 | None:intergenic | 30.0% | |
| ATTACTATTGTCACTGAATC+TGG | - | chr3.3:31543713-31543732 | None:intergenic | 30.0% | |
| CAAAACTAGACACTAATTGA+AGG | - | chr3.3:31543629-31543648 | None:intergenic | 30.0% | |
| CAAGAATATAGGGGATATTA+AGG | + | chr3.3:31541734-31541753 | MS.gene29411:intron | 30.0% | |
| CCAATTATATCTTTAGATGC+GGG | - | chr3.3:31542475-31542494 | None:intergenic | 30.0% | |
| CGATTTCCTACTTACAAAAT+TGG | + | chr3.3:31537604-31537623 | MS.gene29411:CDS | 30.0% | |
| CTGATTTACTATCCTTACTA+GGG | - | chr3.3:31542825-31542844 | None:intergenic | 30.0% | |
| CTGTCTTGAAATAATTCTGT+TGG | + | chr3.3:31539854-31539873 | MS.gene29411:intron | 30.0% | |
| CTTAATATCCCCTATATTCT+TGG | - | chr3.3:31541736-31541755 | None:intergenic | 30.0% | |
| CTTGCTAGTAAATTTGAGAA+GGG | + | chr3.3:31537736-31537755 | MS.gene29411:CDS | 30.0% | |
| CTTTACATGTTCACTTTGTT+TGG | + | chr3.3:31542753-31542772 | MS.gene29411:intron | 30.0% | |
| GAAAGAAACCAAGAATATAG+GGG | + | chr3.3:31541725-31541744 | MS.gene29411:intron | 30.0% | |
| GACATGTATAATTGGTTGAA+GGG | + | chr3.3:31541764-31541783 | MS.gene29411:intron | 30.0% | |
| GAGAAAGAAACCAAGAATAT+AGG | + | chr3.3:31541723-31541742 | MS.gene29411:intron | 30.0% | |
| GAGTATCTAGATTCATTTGT+AGG | + | chr3.3:31539434-31539453 | MS.gene29411:intron | 30.0% | |
| GATATATAATTGCTCCAAAG+AGG | + | chr3.3:31542494-31542513 | MS.gene29411:intron | 30.0% | |
| GTCTTGTCAATTCAAAGAAA+TGG | + | chr3.3:31543322-31543341 | MS.gene29411:intron | 30.0% | |
| GTTTGGCATAGATTGTAATA+CGG | + | chr3.3:31542770-31542789 | MS.gene29411:intron | 30.0% | |
| TAATCTGTCTATTGACCTAT+TGG | + | chr3.3:31539269-31539288 | MS.gene29411:intron | 30.0% | |
| TAGTAAATTTGAGAAGGGTT+TGG | + | chr3.3:31537741-31537760 | MS.gene29411:CDS | 30.0% | |
| TATATTCAATACTTTGCAGG+TGG | + | chr3.3:31543736-31543755 | MS.gene29411:intron | 30.0% | |
| TATCATGACTCTTAGAAATC+AGG | - | chr3.3:31538205-31538224 | None:intergenic | 30.0% | |
| TCAAAATGGCATAACATGAT+AGG | - | chr3.3:31541115-31541134 | None:intergenic | 30.0% | |
| TCCCACATTAAGTATATGAA+TGG | - | chr3.3:31543801-31543820 | None:intergenic | 30.0% | |
| TCTGATTTACTATCCTTACT+AGG | - | chr3.3:31542826-31542845 | None:intergenic | 30.0% | |
| TGAACTCGAATAGAATTCTT+TGG | - | chr3.3:31543864-31543883 | None:intergenic | 30.0% | |
| TGCTAAGAAACTTGTATATG+AGG | + | chr3.3:31539467-31539486 | MS.gene29411:CDS | 30.0% | |
| TGGATCTAATAATCAGATCA+TGG | + | chr3.3:31537624-31537643 | MS.gene29411:CDS | 30.0% | |
| TGGGAAACATAAATGACAAA+AGG | - | chr3.3:31539613-31539632 | None:intergenic | 30.0% | |
| TTATATTCGACTCCAAAAAG+AGG | + | chr3.3:31541085-31541104 | MS.gene29411:CDS | 30.0% | |
| TTCGGCTAATTCAAAGAATT+TGG | - | chr3.3:31542543-31542562 | None:intergenic | 30.0% | |
| TTTCAGAATGTTCAATTCAG+TGG | + | chr3.3:31541385-31541404 | MS.gene29411:CDS | 30.0% | |
| TTTCTACTTGTACTTCTGAA+TGG | + | chr3.3:31539773-31539792 | MS.gene29411:intron | 30.0% | |
| ! | AAAGAAAGTAGTGGAAAGAA+GGG | - | chr3.3:31540921-31540940 | None:intergenic | 30.0% |
| ! | ACCTGAAATAAGTTCCTTTT+TGG | - | chr3.3:31541433-31541452 | None:intergenic | 30.0% |
| ! | AGAGATTATCAAAGAAGCAT+AGG | - | chr3.3:31538048-31538067 | None:intergenic | 30.0% |
| ! | AGTATATGAATGGATTCAGT+TGG | - | chr3.3:31543791-31543810 | None:intergenic | 30.0% |
| ! | ATGAGAATGAAGCTTTGTAA+AGG | + | chr3.3:31543824-31543843 | MS.gene29411:CDS | 30.0% |
| ! | ATTGAACATTCTGAAAGTTC+GGG | - | chr3.3:31541381-31541400 | None:intergenic | 30.0% |
| ! | CAAAGAAATTTCCTTTTCCA+AGG | + | chr3.3:31539409-31539428 | MS.gene29411:intron | 30.0% |
| ! | GCTAACAAATTTTCTTAAGC+AGG | + | chr3.3:31538855-31538874 | MS.gene29411:CDS | 30.0% |
| ! | TATTCTATGAAGGTGTAGAA+TGG | + | chr3.3:31540807-31540826 | MS.gene29411:intron | 30.0% |
| ! | TGAGAATGAAGCTTTGTAAA+GGG | + | chr3.3:31543825-31543844 | MS.gene29411:CDS | 30.0% |
| ! | TTATGTCTTATTCATCAGTC+AGG | + | chr3.3:31542198-31542217 | MS.gene29411:intron | 30.0% |
| !! | AAAGAAGGGTATTTCAACAA+AGG | - | chr3.3:31540907-31540926 | None:intergenic | 30.0% |
| !! | AAGTTCCTTTTTGGCATTTT+CGG | - | chr3.3:31541424-31541443 | None:intergenic | 30.0% |
| !! | AGGTATTGGAAATTTAGCAA+TGG | - | chr3.3:31544307-31544326 | None:intergenic | 30.0% |
| !! | AGGTTTATTATAAGCATCGA+TGG | - | chr3.3:31543609-31543628 | None:intergenic | 30.0% |
| !! | CTTCAATTAGTGTCTAGTTT+TGG | + | chr3.3:31543627-31543646 | MS.gene29411:intron | 30.0% |
| !! | CTTTTAAAGAAGATCAGAGA+TGG | + | chr3.3:31537942-31537961 | MS.gene29411:CDS | 30.0% |
| !! | GGTTTCTATTTTGCTTTTCA+AGG | + | chr3.3:31541499-31541518 | MS.gene29411:intron | 30.0% |
| !! | TTTCTACTTTTATCTACCTC+TGG | + | chr3.3:31541565-31541584 | MS.gene29411:intron | 30.0% |
| !! | TTTTATTTGTTTTCAGCTGC+TGG | + | chr3.3:31543385-31543404 | MS.gene29411:intron | 30.0% |
| !!! | ACTGTTTTTAACATTTTCGG+TGG | + | chr3.3:31543949-31543968 | MS.gene29411:intron | 30.0% |
| !!! | GGGTAATTTATTTTTGAAGC+AGG | - | chr3.3:31542805-31542824 | None:intergenic | 30.0% |
| !!! | GTTTTGAAATAGATAATGCC+CGG | + | chr3.3:31539505-31539524 | MS.gene29411:CDS | 30.0% |
| !!! | TCTGATTGACTTTTAGGTTA+TGG | + | chr3.3:31541007-31541026 | MS.gene29411:intron | 30.0% |
| !!! | TGACTTTTAGGTTATGGATA+TGG | + | chr3.3:31541013-31541032 | MS.gene29411:intron | 30.0% |
| !!! | TTCCCAACTTTTAACTTTGA+AGG | + | chr3.3:31539627-31539646 | MS.gene29411:intron | 30.0% |
| !!! | TTTTGAAATAGATAATGCCC+GGG | + | chr3.3:31539506-31539525 | MS.gene29411:CDS | 30.0% |
| AAAGAACTTGTAATTAGGGG+TGG | + | chr3.3:31538480-31538499 | MS.gene29411:intron | 35.0% | |
| AAAGATAGTCCAATCACTAG+AGG | + | chr3.3:31542848-31542867 | MS.gene29411:intron | 35.0% | |
| AACGTCATAATGTCTCCTAT+AGG | - | chr3.3:31542893-31542912 | None:intergenic | 35.0% | |
| AACTACAACCACAAACAAGA+GGG | - | chr3.3:31540492-31540511 | None:intergenic | 35.0% | |
| AAGAACTTGTAATTAGGGGT+GGG | + | chr3.3:31538481-31538500 | MS.gene29411:intron | 35.0% | |
| AAGTGAGAAGGACTATATGA+AGG | + | chr3.3:31541893-31541912 | MS.gene29411:intron | 35.0% | |
| ACAAATATGGCACTATTGTG+AGG | - | chr3.3:31540664-31540683 | None:intergenic | 35.0% | |
| ACACTTGCCATTATGTCAAA+AGG | - | chr3.3:31539664-31539683 | None:intergenic | 35.0% | |
| ACTTGATTGGACAGAAAAAC+AGG | - | chr3.3:31543349-31543368 | None:intergenic | 35.0% | |
| AGAGTAGAATTATGGGAGAA+TGG | + | chr3.3:31538547-31538566 | MS.gene29411:intron | 35.0% | |
| AGTGAGAAGGACTATATGAA+GGG | + | chr3.3:31541894-31541913 | MS.gene29411:intron | 35.0% | |
| ATATCTATGCACCAACTTGA+TGG | - | chr3.3:31542344-31542363 | None:intergenic | 35.0% | |
| ATATTTCCATCTAACTACGC+AGG | + | chr3.3:31539806-31539825 | MS.gene29411:intron | 35.0% | |
| ATGACTCTTAGAAATCAGGT+TGG | - | chr3.3:31538201-31538220 | None:intergenic | 35.0% | |
| ATGAGTTAACTGAACTGCAA+GGG | - | chr3.3:31538794-31538813 | None:intergenic | 35.0% | |
| ATGGAGACAGAGTAGAATTA+TGG | + | chr3.3:31538539-31538558 | MS.gene29411:intron | 35.0% | |
| ATGTATAATTGGTTGAAGGG+GGG | + | chr3.3:31541767-31541786 | MS.gene29411:intron | 35.0% | |
| ATTAATGAAGGAGGTTCAAG+AGG | + | chr3.3:31540392-31540411 | MS.gene29411:CDS | 35.0% | |
| ATTGTTTGATTGTGGGATTC+AGG | + | chr3.3:31537881-31537900 | MS.gene29411:intron | 35.0% | |
| CAAAAAAATTGCACTGTGCT+GGG | + | chr3.3:31541461-31541480 | MS.gene29411:intron | 35.0% | |
| CAAAAATTAGACAGCCCAAT+AGG | - | chr3.3:31539287-31539306 | None:intergenic | 35.0% | |
| CAAATATGGCACTATTGTGA+GGG | - | chr3.3:31540663-31540682 | None:intergenic | 35.0% | |
| CAACTCAAATCCTCTATACT+TGG | + | chr3.3:31539381-31539400 | MS.gene29411:intron | 35.0% | |
| CAATCACAACCTCTTCAAAA+TGG | - | chr3.3:31541129-31541148 | None:intergenic | 35.0% | |
| CACAAAGTATAACTCCTCTT+TGG | - | chr3.3:31542511-31542530 | None:intergenic | 35.0% | |
| CAGTTTAACCTCAACTTGAT+TGG | - | chr3.3:31543362-31543381 | None:intergenic | 35.0% | |
| CATGTATAATTGGTTGAAGG+GGG | + | chr3.3:31541766-31541785 | MS.gene29411:intron | 35.0% | |
| CATTTGAATCAGAGAGAGAA+AGG | + | chr3.3:31544145-31544164 | MS.gene29411:CDS | 35.0% | |
| CCCGCATCTAAAGATATAAT+TGG | + | chr3.3:31542472-31542491 | MS.gene29411:intron | 35.0% | |
| CCTTCTCAAATTTACTAGCA+AGG | - | chr3.3:31537738-31537757 | None:intergenic | 35.0% | |
| CCTTGCTAGTAAATTTGAGA+AGG | + | chr3.3:31537735-31537754 | MS.gene29411:CDS | 35.0% | |
| CTTCTCAAATGCTCAAAAAC+GGG | + | chr3.3:31542381-31542400 | MS.gene29411:intron | 35.0% | |
| CTTGGAACAATTAATGAAGG+AGG | + | chr3.3:31540383-31540402 | MS.gene29411:CDS | 35.0% | |
| CTTTGTAAAGCCAAGTATAG+AGG | - | chr3.3:31539394-31539413 | None:intergenic | 35.0% | |
| GAATTAAACATTGAGAGGGT+TGG | - | chr3.3:31538986-31539005 | None:intergenic | 35.0% | |
| GATAACAGAAAAAGAACAGG+TGG | + | chr3.3:31541824-31541843 | MS.gene29411:intron | 35.0% | |
| GATCATGCGACATAAATTTG+TGG | + | chr3.3:31539994-31540013 | MS.gene29411:intron | 35.0% | |
| GATGATGTGAATCATTTGTC+TGG | - | chr3.3:31543769-31543788 | None:intergenic | 35.0% | |
| GCCAAAAAGGAACTTATTTC+AGG | + | chr3.3:31541429-31541448 | MS.gene29411:CDS | 35.0% | |
| GCTAGAACAATCTGCAATTA+AGG | - | chr3.3:31544327-31544346 | None:intergenic | 35.0% | |
| GCTTCTCAAATGCTCAAAAA+CGG | + | chr3.3:31542380-31542399 | MS.gene29411:intron | 35.0% | |
| GGACATGTATAATTGGTTGA+AGG | + | chr3.3:31541763-31541782 | MS.gene29411:intron | 35.0% | |
| GGACTTGGAACAATTAATGA+AGG | + | chr3.3:31540380-31540399 | MS.gene29411:intron | 35.0% | |
| GGGACAAGTAAAATGAATGA+TGG | - | chr3.3:31541609-31541628 | None:intergenic | 35.0% | |
| GGGAGAGGAAAATATCAAAA+TGG | - | chr3.3:31543979-31543998 | None:intergenic | 35.0% | |
| GTTCATGAATAGGTGAGATT+CGG | - | chr3.3:31542719-31542738 | None:intergenic | 35.0% | |
| TAATTGCAGATTGTTCTAGC+TGG | + | chr3.3:31544327-31544346 | MS.gene29411:intron | 35.0% | |
| TATAAGGGAATTCTTGGACT+AGG | + | chr3.3:31541947-31541966 | MS.gene29411:intron | 35.0% | |
| TATCTACCTCTGGTATATTG+TGG | + | chr3.3:31541575-31541594 | MS.gene29411:intron | 35.0% | |
| TATGAGTTAACTGAACTGCA+AGG | - | chr3.3:31538795-31538814 | None:intergenic | 35.0% | |
| TCATCGCTTGTTCTTGTATA+TGG | + | chr3.3:31543581-31543600 | MS.gene29411:intron | 35.0% | |
| TCTTTGGTTGTGAAATCGTT+AGG | + | chr3.3:31540527-31540546 | MS.gene29411:intron | 35.0% | |
| TGACTCTTAGAAATCAGGTT+GGG | - | chr3.3:31538200-31538219 | None:intergenic | 35.0% | |
| TGCAGTTCAGTTAACTCATA+GGG | + | chr3.3:31538795-31538814 | MS.gene29411:CDS | 35.0% | |
| TGGAGACAGAGTAGAATTAT+GGG | + | chr3.3:31538540-31538559 | MS.gene29411:intron | 35.0% | |
| TTAGAAGGGACTGAAACATT+AGG | + | chr3.3:31541318-31541337 | MS.gene29411:CDS | 35.0% | |
| TTCAGTTAACTCATAGGGAA+GGG | + | chr3.3:31538800-31538819 | MS.gene29411:CDS | 35.0% | |
| TTGCAGTTCAGTTAACTCAT+AGG | + | chr3.3:31538794-31538813 | MS.gene29411:CDS | 35.0% | |
| TTGCCAACTGAAAAGTGAAA+TGG | - | chr3.3:31541257-31541276 | None:intergenic | 35.0% | |
| TTGTACTTCTGAATGGTTCA+TGG | + | chr3.3:31539780-31539799 | MS.gene29411:intron | 35.0% | |
| TTTCAAACCAAAGGAGAAAG+TGG | - | chr3.3:31539898-31539917 | None:intergenic | 35.0% | |
| TTTCTTGATTGCGGTATATC+TGG | + | chr3.3:31538228-31538247 | MS.gene29411:intron | 35.0% | |
| ! | AACATGGAGTTGGTTGTAAA+GGG | - | chr3.3:31538265-31538284 | None:intergenic | 35.0% |
| ! | AATGGATTCAGAGCATTTCA+GGG | + | chr3.3:31540825-31540844 | MS.gene29411:intron | 35.0% |
| ! | ATGATAGGCATACCTCTTTT+TGG | - | chr3.3:31541100-31541119 | None:intergenic | 35.0% |
| ! | ATGGAATACTGGAAAGCATA+TGG | - | chr3.3:31542683-31542702 | None:intergenic | 35.0% |
| ! | ATGTCTCCTATAGGTGTTTT+CGG | - | chr3.3:31542884-31542903 | None:intergenic | 35.0% |
| ! | ATTCTATTCGAGTTCAATGC+AGG | + | chr3.3:31543868-31543887 | MS.gene29411:CDS | 35.0% |
| ! | CAAAGAAAGTAGTGGAAAGA+AGG | - | chr3.3:31540922-31540941 | None:intergenic | 35.0% |
| ! | GGATCTTCCTTTTGACATAA+TGG | + | chr3.3:31539654-31539673 | MS.gene29411:intron | 35.0% |
| ! | TAACACGTTTTTGTGTTCTC+AGG | + | chr3.3:31543090-31543109 | MS.gene29411:intron | 35.0% |
| ! | TGACACTATGATGATGCATA+AGG | + | chr3.3:31537546-31537565 | MS.gene29411:CDS | 35.0% |
| ! | TGTTGACTAGAAGTCACAAA+AGG | + | chr3.3:31542438-31542457 | MS.gene29411:intron | 35.0% |
| ! | TTGAACATTCTGAAAGTTCG+GGG | - | chr3.3:31541380-31541399 | None:intergenic | 35.0% |
| !! | AGTTCCTTTTTGGCATTTTC+GGG | - | chr3.3:31541423-31541442 | None:intergenic | 35.0% |
| !! | ATGGGTTGGAATCCTTAAAA+GGG | + | chr3.3:31537961-31537980 | MS.gene29411:CDS | 35.0% |
| !! | ATTTCACTTTTCAGTTGGCA+AGG | + | chr3.3:31541256-31541275 | MS.gene29411:intron | 35.0% |
| !! | CTTCCATTTCACTTTTCAGT+TGG | + | chr3.3:31541251-31541270 | MS.gene29411:intron | 35.0% |
| !! | TGTACACGAAGCTATTTCTT+TGG | + | chr3.3:31538010-31538029 | MS.gene29411:CDS | 35.0% |
| !! | TTTCACTTTTCAGTTGGCAA+GGG | + | chr3.3:31541257-31541276 | MS.gene29411:intron | 35.0% |
| !! | TTTTCTGTCCAATCAAGTTG+AGG | + | chr3.3:31543351-31543370 | MS.gene29411:intron | 35.0% |
| !!! | CATGTTATGCCATTTTGAAG+AGG | + | chr3.3:31541117-31541136 | MS.gene29411:intron | 35.0% |
| !!! | TCTTGTTTTCTTCAGCTTTG+TGG | + | chr3.3:31544048-31544067 | MS.gene29411:intron | 35.0% |
| AAAGAAGATCAGAGATGGGT+TGG | + | chr3.3:31537947-31537966 | MS.gene29411:CDS | 40.0% | |
| AACACGAGCTTCAAGCATTA+AGG | + | chr3.3:31541036-31541055 | MS.gene29411:CDS | 40.0% | |
| AAGCATTCAGCTTCAACCAA+AGG | + | chr3.3:31539073-31539092 | MS.gene29411:intron | 40.0% | |
| AATATGCGTCCAACGTCAAA+AGG | - | chr3.3:31543144-31543163 | None:intergenic | 40.0% | |
| ACAAAAGAGAGTCCTTGCTT+TGG | - | chr3.3:31544120-31544139 | None:intergenic | 40.0% | |
| ACAAAAGATGGCCTGAACAT+GGG | + | chr3.3:31538130-31538149 | MS.gene29411:intron | 40.0% | |
| ACCTCTGGTATATTGTGGTT+GGG | + | chr3.3:31541580-31541599 | MS.gene29411:intron | 40.0% | |
| ACGATTTCACAACCAAAGAG+AGG | - | chr3.3:31540526-31540545 | None:intergenic | 40.0% | |
| ACTGTGGTAACTGTCAATTC+TGG | + | chr3.3:31543898-31543917 | MS.gene29411:intron | 40.0% | |
| AGAAAAAGAACAGGTGGCAA+TGG | + | chr3.3:31541830-31541849 | MS.gene29411:intron | 40.0% | |
| AGAAATCACGAGTCCAATGA+TGG | - | chr3.3:31541550-31541569 | None:intergenic | 40.0% | |
| AGAACTTGTAATTAGGGGTG+GGG | + | chr3.3:31538482-31538501 | MS.gene29411:intron | 40.0% | |
| AGAAGACCGAAAACACCTAT+AGG | + | chr3.3:31542875-31542894 | MS.gene29411:intron | 40.0% | |
| AGAGAAGATACATGGATCAC+AGG | + | chr3.3:31541868-31541887 | MS.gene29411:intron | 40.0% | |
| AGTAATTAGGCCCAAAGAAC+AGG | + | chr3.3:31541681-31541700 | MS.gene29411:intron | 40.0% | |
| ATATAGGGGATATTAAGGGG+AGG | + | chr3.3:31541739-31541758 | MS.gene29411:intron | 40.0% | |
| ATCACCCGAAAATGCCAAAA+AGG | + | chr3.3:31541416-31541435 | MS.gene29411:CDS | 40.0% | |
| ATGACAACAAGAAGCAAGAG+TGG | - | chr3.3:31544000-31544019 | None:intergenic | 40.0% | |
| ATGATGAGAGATACCTTGCT+TGG | - | chr3.3:31540444-31540463 | None:intergenic | 40.0% | |
| ATGCTTTCCAGTATTCCATG+AGG | + | chr3.3:31542684-31542703 | MS.gene29411:intron | 40.0% | |
| CAATGCAGGTATTTCAACTG+TGG | + | chr3.3:31543882-31543901 | MS.gene29411:intron | 40.0% | |
| CATTATCAGGTAGTTTCGTC+TGG | + | chr3.3:31543047-31543066 | MS.gene29411:intron | 40.0% | |
| CCAAAAAAATTGCACTGTGC+TGG | + | chr3.3:31541460-31541479 | MS.gene29411:intron | 40.0% | |
| CGTAACAGCTTTCAAACCAA+AGG | - | chr3.3:31539907-31539926 | None:intergenic | 40.0% | |
| CTATATGAAGGGGTAGCTAA+AGG | + | chr3.3:31541905-31541924 | MS.gene29411:intron | 40.0% | |
| GAACTACAACCACAAACAAG+AGG | - | chr3.3:31540493-31540512 | None:intergenic | 40.0% | |
| GAATTATGGGAGAATGGATG+AGG | + | chr3.3:31538553-31538572 | MS.gene29411:intron | 40.0% | |
| GAGAGAATGTCTCAAACTTC+AGG | + | chr3.3:31539567-31539586 | MS.gene29411:CDS | 40.0% | |
| GAGCATTTGAGAAGCAAGTT+GGG | - | chr3.3:31542375-31542394 | None:intergenic | 40.0% | |
| GATTCATTTGTAGGCTTCTG+AGG | + | chr3.3:31539443-31539462 | MS.gene29411:intron | 40.0% | |
| GTGAGAAGGACTATATGAAG+GGG | + | chr3.3:31541895-31541914 | MS.gene29411:intron | 40.0% | |
| GTTCAGTTAACTCATAGGGA+AGG | + | chr3.3:31538799-31538818 | MS.gene29411:CDS | 40.0% | |
| TAAAGAAGGCTTATCCCACA+AGG | - | chr3.3:31542940-31542959 | None:intergenic | 40.0% | |
| TACAACCAACTCCATGTTGT+TGG | + | chr3.3:31538267-31538286 | MS.gene29411:intron | 40.0% | |
| TACAGTAGTGTTCAATCTGC+AGG | + | chr3.3:31538762-31538781 | MS.gene29411:intron | 40.0% | |
| TACCTCTGGTATATTGTGGT+TGG | + | chr3.3:31541579-31541598 | MS.gene29411:intron | 40.0% | |
| TACTTCTGAATGGTTCATGG+TGG | + | chr3.3:31539783-31539802 | MS.gene29411:intron | 40.0% | |
| TAGATACTCAGCCTTGGAAA+AGG | - | chr3.3:31539423-31539442 | None:intergenic | 40.0% | |
| TATAGGGGATATTAAGGGGA+GGG | + | chr3.3:31541740-31541759 | MS.gene29411:intron | 40.0% | |
| TCACACTTTGTACTCGTCAA+TGG | - | chr3.3:31542633-31542652 | None:intergenic | 40.0% | |
| TCAGTTAACTCATAGGGAAG+GGG | + | chr3.3:31538801-31538820 | MS.gene29411:CDS | 40.0% | |
| TCATAGTGTCACCAAAACTG+CGG | - | chr3.3:31537537-31537556 | None:intergenic | 40.0% | |
| TCCTTCATCGATAGCACTTT+CGG | - | chr3.3:31537655-31537674 | None:intergenic | 40.0% | |
| TCTCTGGTGATTTAGTGCAT+GGG | + | chr3.3:31540099-31540118 | MS.gene29411:intron | 40.0% | |
| TGAATCTAGATACTCAGCCT+TGG | - | chr3.3:31539429-31539448 | None:intergenic | 40.0% | |
| TGACAACAAGAAGCAAGAGT+GGG | - | chr3.3:31543999-31544018 | None:intergenic | 40.0% | |
| TGACGAGACAAAGAAAGTAG+TGG | - | chr3.3:31540930-31540949 | None:intergenic | 40.0% | |
| TGAGCATTTGAGAAGCAAGT+TGG | - | chr3.3:31542376-31542395 | None:intergenic | 40.0% | |
| TGTATAATTGGTTGAAGGGG+GGG | + | chr3.3:31541768-31541787 | MS.gene29411:intron | 40.0% | |
| TGTGCAATTTGTGATGCCTT+TGG | - | chr3.3:31539092-31539111 | None:intergenic | 40.0% | |
| TTAAAGCCTGCGTAGTTAGA+TGG | - | chr3.3:31539815-31539834 | None:intergenic | 40.0% | |
| TTCACAACCAAAGAGAGGTA+AGG | - | chr3.3:31540521-31540540 | None:intergenic | 40.0% | |
| TTCTCTGGTGATTTAGTGCA+TGG | + | chr3.3:31540098-31540117 | MS.gene29411:intron | 40.0% | |
| TTTCCAGTATTCCATGAGGT+TGG | + | chr3.3:31542688-31542707 | MS.gene29411:intron | 40.0% | |
| ! | AGAGAAGTTAGTTCTTCCTC+TGG | + | chr3.3:31541973-31541992 | MS.gene29411:intron | 40.0% |
| ! | AGTTAGTTCTTCCTCTGGAA+AGG | + | chr3.3:31541978-31541997 | MS.gene29411:intron | 40.0% |
| ! | CAACATGGAGTTGGTTGTAA+AGG | - | chr3.3:31538266-31538285 | None:intergenic | 40.0% |
| ! | GAATGGATTCAGAGCATTTC+AGG | + | chr3.3:31540824-31540843 | MS.gene29411:intron | 40.0% |
| ! | GTTAGTTCTTCCTCTGGAAA+GGG | + | chr3.3:31541979-31541998 | MS.gene29411:intron | 40.0% |
| ! | TATGATGATGCATAAGGACG+TGG | + | chr3.3:31537552-31537571 | MS.gene29411:CDS | 40.0% |
| ! | TGAACATTCTGAAAGTTCGG+GGG | - | chr3.3:31541379-31541398 | None:intergenic | 40.0% |
| ! | TGGTTTGGGAAACTATGTAG+AGG | + | chr3.3:31543405-31543424 | MS.gene29411:CDS | 40.0% |
| ! | TTAGTTCTTCCTCTGGAAAG+GGG | + | chr3.3:31541980-31541999 | MS.gene29411:intron | 40.0% |
| ! | TTGAAACACCCTCTTGTTTG+TGG | + | chr3.3:31540481-31540500 | MS.gene29411:intron | 40.0% |
| ! | TTTTCGACCACTTTCTCCTT+TGG | + | chr3.3:31539888-31539907 | MS.gene29411:intron | 40.0% |
| !! | AGGTGATTACGGAGCATTTT+AGG | + | chr3.3:31538383-31538402 | MS.gene29411:intron | 40.0% |
| !! | CAAGTTCTTTGAAATCACGC+TGG | - | chr3.3:31538470-31538489 | None:intergenic | 40.0% |
| !! | GATGGGTTGGAATCCTTAAA+AGG | + | chr3.3:31537960-31537979 | MS.gene29411:CDS | 40.0% |
| !! | TCTGAAGGAGTTTTGTGATC+TGG | - | chr3.3:31544354-31544373 | None:intergenic | 40.0% |
| !! | TTCTGGGGCATAAACTGATT+TGG | - | chr3.3:31543121-31543140 | None:intergenic | 40.0% |
| !! | TTTAGTTCTGTGGGTTCTGT+AGG | + | chr3.3:31540359-31540378 | MS.gene29411:intron | 40.0% |
| !! | TTTGTTTTCAGCTGCTGGTT+TGG | + | chr3.3:31543390-31543409 | MS.gene29411:intron | 40.0% |
| !!! | CCAGCACAGTGCAATTTTTT+TGG | - | chr3.3:31541463-31541482 | None:intergenic | 40.0% |
| !!! | CTATTTTGGCAACCAAAGCA+AGG | + | chr3.3:31544105-31544124 | MS.gene29411:CDS | 40.0% |
| !!! | TTGTTTTCAGCTGCTGGTTT+GGG | + | chr3.3:31543391-31543410 | MS.gene29411:intron | 40.0% |
| AAAAGATGGCCTGAACATGG+GGG | + | chr3.3:31538132-31538151 | MS.gene29411:intron | 45.0% | |
| AACCAAAGAGAGGTAAGGTC+AGG | - | chr3.3:31540516-31540535 | None:intergenic | 45.0% | |
| AACCAACTCCATGTTGTTGG+AGG | + | chr3.3:31538270-31538289 | MS.gene29411:intron | 45.0% | |
| AACTAGAAGGGCCTGTTCTT+TGG | - | chr3.3:31541695-31541714 | None:intergenic | 45.0% | |
| AATTTGTGGCAGTGTGCAGT+TGG | + | chr3.3:31540020-31540039 | MS.gene29411:intron | 45.0% | |
| ACCAAAGAGAGGTAAGGTCA+GGG | - | chr3.3:31540515-31540534 | None:intergenic | 45.0% | |
| ACCCAACCACAATATACCAG+AGG | - | chr3.3:31541584-31541603 | None:intergenic | 45.0% | |
| ACTAAGAAACCCCTTTCCAG+AGG | - | chr3.3:31541992-31542011 | None:intergenic | 45.0% | |
| ACTAGAAGGGCCTGTTCTTT+GGG | - | chr3.3:31541694-31541713 | None:intergenic | 45.0% | |
| ATAGGGGATATTAAGGGGAG+GGG | + | chr3.3:31541741-31541760 | MS.gene29411:intron | 45.0% | |
| ATGCAGCTATCATGCTTGCA+AGG | + | chr3.3:31544169-31544188 | MS.gene29411:CDS | 45.0% | |
| ATGTAGCCAATTCCTCCTTG+TGG | + | chr3.3:31542922-31542941 | MS.gene29411:intron | 45.0% | |
| CAAAAGATGGCCTGAACATG+GGG | + | chr3.3:31538131-31538150 | MS.gene29411:intron | 45.0% | |
| CAGATCACACTGTCAACCAT+CGG | + | chr3.3:31543192-31543211 | MS.gene29411:CDS | 45.0% | |
| CAGTTGGCAAGGGAAAAGAA+AGG | + | chr3.3:31541267-31541286 | MS.gene29411:intron | 45.0% | |
| CATAGTGTCACCAAAACTGC+GGG | - | chr3.3:31537536-31537555 | None:intergenic | 45.0% | |
| CCTTCATCGATAGCACTTTC+GGG | - | chr3.3:31537654-31537673 | None:intergenic | 45.0% | |
| CTAACACAACCCCACTAAAC+CGG | - | chr3.3:31538176-31538195 | None:intergenic | 45.0% | |
| CTATGCACCAACTTGATGGA+GGG | - | chr3.3:31542340-31542359 | None:intergenic | 45.0% | |
| CTTATCCCACAAGGAGGAAT+TGG | - | chr3.3:31542931-31542950 | None:intergenic | 45.0% | |
| CTTCCAACCTCATGGAATAC+TGG | - | chr3.3:31542694-31542713 | None:intergenic | 45.0% | |
| CTTCTGCAACCTCTAGTGAT+TGG | - | chr3.3:31542860-31542879 | None:intergenic | 45.0% | |
| GACAAAAGATGGCCTGAACA+TGG | + | chr3.3:31538129-31538148 | MS.gene29411:intron | 45.0% | |
| GGTTGGAATCCTTAAAAGGG+CGG | + | chr3.3:31537964-31537983 | MS.gene29411:CDS | 45.0% | |
| GTAGCCAAACCTGGTTCAAT+TGG | - | chr3.3:31543219-31543238 | None:intergenic | 45.0% | |
| GTATAATTGGTTGAAGGGGG+GGG | + | chr3.3:31541769-31541788 | MS.gene29411:intron | 45.0% | |
| GTCAGTTGGGTATCCATCAT+TGG | + | chr3.3:31541534-31541553 | MS.gene29411:intron | 45.0% | |
| GTCCAACGTCAAAAGGTTCT+GGG | - | chr3.3:31543137-31543156 | None:intergenic | 45.0% | |
| GTCTCAAACTTCAGGAAACC+AGG | + | chr3.3:31539575-31539594 | MS.gene29411:CDS | 45.0% | |
| GTGCAAGTTAATGGCACAGT+AGG | - | chr3.3:31542989-31543008 | None:intergenic | 45.0% | |
| GTTGGAATCCTTAAAAGGGC+GGG | + | chr3.3:31537965-31537984 | MS.gene29411:CDS | 45.0% | |
| TATAATTGGTTGAAGGGGGG+GGG | + | chr3.3:31541770-31541789 | MS.gene29411:intron | 45.0% | |
| TCCAACGTCAAAAGGTTCTG+GGG | - | chr3.3:31543136-31543155 | None:intergenic | 45.0% | |
| TCTATGCACCAACTTGATGG+AGG | - | chr3.3:31542341-31542360 | None:intergenic | 45.0% | |
| TGCTGCTAAGTTGTCTGAAG+AGG | + | chr3.3:31537768-31537787 | MS.gene29411:CDS | 45.0% | |
| TGTAGCCAATTCCTCCTTGT+GGG | + | chr3.3:31542923-31542942 | MS.gene29411:intron | 45.0% | |
| ! | GCTGGGTGAATAGCTTTTGA+AGG | + | chr3.3:31541478-31541497 | MS.gene29411:intron | 45.0% |
| !! | GAAAGTGCTATCGATGAAGG+AGG | + | chr3.3:31537654-31537673 | MS.gene29411:CDS | 45.0% |
| !! | TGAAAGTTCGGGGGCATTAT+TGG | - | chr3.3:31541370-31541389 | None:intergenic | 45.0% |
| !!! | AATAAAATGATTAAATTTTA+CGG | - | chr3.3:31540076-31540095 | None:intergenic | 5.0% |
| AAAGAGTCCCTGTCCCACAT+CGG | + | chr3.3:31538107-31538126 | MS.gene29411:intron | 50.0% | |
| AAGGCCATGACTCGTACATG+AGG | - | chr3.3:31538296-31538315 | None:intergenic | 50.0% | |
| AATGCTGCATCAGCCAAGCA+AGG | + | chr3.3:31540428-31540447 | MS.gene29411:CDS | 50.0% | |
| ACAAGAAGCAAGAGTGGGAG+AGG | - | chr3.3:31543994-31544013 | None:intergenic | 50.0% | |
| ACACTCACAGAGGGAGTAGA+TGG | + | chr3.3:31538520-31538539 | MS.gene29411:intron | 50.0% | |
| ACAGGTGGCAATGGCATGAA+TGG | + | chr3.3:31541839-31541858 | MS.gene29411:intron | 50.0% | |
| ACATGAGGCCTCCAACAACA+TGG | - | chr3.3:31538281-31538300 | None:intergenic | 50.0% | |
| ACCAGGTTTGGCTACAATGC+TGG | + | chr3.3:31543224-31543243 | MS.gene29411:intron | 50.0% | |
| ACCATCGGTCCAATTGAACC+AGG | + | chr3.3:31543207-31543226 | MS.gene29411:CDS | 50.0% | |
| ACCTGGTTCAATTGGACCGA+TGG | - | chr3.3:31543211-31543230 | None:intergenic | 50.0% | |
| ACTTGTAATTAGGGGTGGGG+TGG | + | chr3.3:31538485-31538504 | MS.gene29411:intron | 50.0% | |
| AGAAGGCTTATCCCACAAGG+AGG | - | chr3.3:31542937-31542956 | None:intergenic | 50.0% | |
| AGCAGTTCAAAGAGTGGAGG+AGG | + | chr3.3:31539530-31539549 | MS.gene29411:CDS | 50.0% | |
| AGGGGAGCTAGTACAACAGA+AGG | + | chr3.3:31538819-31538838 | MS.gene29411:CDS | 50.0% | |
| ATAATTGGTTGAAGGGGGGG+GGG | + | chr3.3:31541771-31541790 | MS.gene29411:intron | 50.0% | |
| ATTCGGAGCTTCCAACCTCA+TGG | - | chr3.3:31542702-31542721 | None:intergenic | 50.0% | |
| CAGCTATCATGCTTGCAAGG+AGG | + | chr3.3:31544172-31544191 | MS.gene29411:CDS | 50.0% | |
| CGGTCCAATTGAACCAGGTT+TGG | + | chr3.3:31543212-31543231 | MS.gene29411:intron | 50.0% | |
| CGGTTTAGTGGGGTTGTGTT+AGG | + | chr3.3:31538174-31538193 | MS.gene29411:intron | 50.0% | |
| CGTCCAACGTCAAAAGGTTC+TGG | - | chr3.3:31543138-31543157 | None:intergenic | 50.0% | |
| CTTGTAATTAGGGGTGGGGT+GGG | + | chr3.3:31538486-31538505 | MS.gene29411:intron | 50.0% | |
| GAAGGGGTAGCTAAAGGAAG+AGG | + | chr3.3:31541911-31541930 | MS.gene29411:intron | 50.0% | |
| GCTAGTACAACAGAAGGCTG+AGG | + | chr3.3:31538825-31538844 | MS.gene29411:CDS | 50.0% | |
| GGAGAGGGAGAGAAGATACA+TGG | + | chr3.3:31541860-31541879 | MS.gene29411:intron | 50.0% | |
| GGATCACAGGACAAGTGAGA+AGG | + | chr3.3:31541881-31541900 | MS.gene29411:intron | 50.0% | |
| GGCAAGGGAAAAGAAAGGAG+AGG | + | chr3.3:31541272-31541291 | MS.gene29411:CDS | 50.0% | |
| GGCAATGGCATGAATGGAGA+GGG | + | chr3.3:31541845-31541864 | MS.gene29411:intron | 50.0% | |
| GGGAGGGGGACATGTATAAT+TGG | + | chr3.3:31541756-31541775 | MS.gene29411:intron | 50.0% | |
| GGTCTTCATGCGAGTCAGTT+GGG | + | chr3.3:31541521-31541540 | MS.gene29411:intron | 50.0% | |
| GGTTGAAGCTGAATGCTTGC+AGG | - | chr3.3:31539071-31539090 | None:intergenic | 50.0% | |
| GTCCCACATCGGACAAAAGA+TGG | + | chr3.3:31538118-31538137 | MS.gene29411:intron | 50.0% | |
| TAGGGGATATTAAGGGGAGG+GGG | + | chr3.3:31541742-31541761 | MS.gene29411:intron | 50.0% | |
| TCCAACACCCTCCATCAAGT+TGG | + | chr3.3:31542330-31542349 | MS.gene29411:intron | 50.0% | |
| TCCAGCATTGTAGCCAAACC+TGG | - | chr3.3:31543228-31543247 | None:intergenic | 50.0% | |
| TCCCTGACCTTACCTCTCTT+TGG | + | chr3.3:31540511-31540530 | MS.gene29411:intron | 50.0% | |
| TCTGTGGGTTCTGTAGGACT+TGG | + | chr3.3:31540365-31540384 | MS.gene29411:intron | 50.0% | |
| TGGCAATGGCATGAATGGAG+AGG | + | chr3.3:31541844-31541863 | MS.gene29411:intron | 50.0% | |
| TTGTAATTAGGGGTGGGGTG+GGG | + | chr3.3:31538487-31538506 | MS.gene29411:intron | 50.0% | |
| TTTGTGGAGTTCGAGGAGGT+GGG | + | chr3.3:31544064-31544083 | MS.gene29411:CDS | 50.0% | |
| ! | AACGGGTCTTGTCAAGCTCT+TGG | + | chr3.3:31542398-31542417 | MS.gene29411:intron | 50.0% |
| ! | ACAAGGATGACCCGCAGTTT+TGG | + | chr3.3:31537523-31537542 | MS.gene29411:CDS | 50.0% |
| ! | ACCAACTTGATGGAGGGTGT+TGG | - | chr3.3:31542334-31542353 | None:intergenic | 50.0% |
| ! | ACCTCACAAGCCGGTTTAGT+GGG | + | chr3.3:31538163-31538182 | MS.gene29411:intron | 50.0% |
| ! | AGGCCATCTTTTGTCCGATG+TGG | - | chr3.3:31538124-31538143 | None:intergenic | 50.0% |
| ! | CTTCAGCTTTGTGGAGTTCG+AGG | + | chr3.3:31544057-31544076 | MS.gene29411:intron | 50.0% |
| ! | CTTTTGTCCGATGTGGGACA+GGG | - | chr3.3:31538117-31538136 | None:intergenic | 50.0% |
| ! | GGCCATCTTTTGTCCGATGT+GGG | - | chr3.3:31538123-31538142 | None:intergenic | 50.0% |
| ! | TCTTTTGTCCGATGTGGGAC+AGG | - | chr3.3:31538118-31538137 | None:intergenic | 50.0% |
| !! | CCCGAAAGTGCTATCGATGA+AGG | + | chr3.3:31537651-31537670 | MS.gene29411:CDS | 50.0% |
| ACGCGAAACTGCACAGCTGT+TGG | + | chr3.3:31537684-31537703 | MS.gene29411:CDS | 55.0% | |
| ATCCTTAAAAGGGCGGGTGG+CGG | + | chr3.3:31537971-31537990 | MS.gene29411:CDS | 55.0% | |
| CACTCTTTGAACTGCTGCCC+GGG | - | chr3.3:31539526-31539545 | None:intergenic | 55.0% | |
| CCACTCTTTGAACTGCTGCC+CGG | - | chr3.3:31539527-31539546 | None:intergenic | 55.0% | |
| CTTTGTGGAGTTCGAGGAGG+TGG | + | chr3.3:31544063-31544082 | MS.gene29411:CDS | 55.0% | |
| GAGGCCTCATGTACGAGTCA+TGG | + | chr3.3:31538289-31538308 | MS.gene29411:intron | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr3.3:31538154-31538173 | MS.gene29411:intron | 55.0% | |
| GGAATCCTTAAAAGGGCGGG+TGG | + | chr3.3:31537968-31537987 | MS.gene29411:CDS | 55.0% | |
| GGCAGCAGTTCAAAGAGTGG+AGG | + | chr3.3:31539527-31539546 | MS.gene29411:CDS | 55.0% | |
| GGCCTCCAACAACATGGAGT+TGG | - | chr3.3:31538275-31538294 | None:intergenic | 55.0% | |
| GGGTCTTCATGCGAGTCAGT+TGG | + | chr3.3:31541520-31541539 | MS.gene29411:intron | 55.0% | |
| GTACGAGTCATGGCCTTCTG+TGG | + | chr3.3:31538299-31538318 | MS.gene29411:intron | 55.0% | |
| TAATTGGTTGAAGGGGGGGG+GGG | + | chr3.3:31541772-31541791 | MS.gene29411:intron | 55.0% | |
| TGAGGATTGCCCCCATGTTC+AGG | - | chr3.3:31538144-31538163 | None:intergenic | 55.0% | |
| TGTAATTAGGGGTGGGGTGG+GGG | + | chr3.3:31538488-31538507 | MS.gene29411:intron | 55.0% | |
| TTTGGGGGGACACTCACAGA+GGG | + | chr3.3:31538511-31538530 | MS.gene29411:intron | 55.0% | |
| ! | CACCTCACAAGCCGGTTTAG+TGG | + | chr3.3:31538162-31538181 | MS.gene29411:intron | 55.0% |
| ! | CAGCTTTGTGGAGTTCGAGG+AGG | + | chr3.3:31544060-31544079 | MS.gene29411:intron | 55.0% |
| ! | CCTCACAAGCCGGTTTAGTG+GGG | + | chr3.3:31538164-31538183 | MS.gene29411:intron | 55.0% |
| ! | CCTTGAAGCGCTTCTCTGTC+TGG | + | chr3.3:31542574-31542593 | MS.gene29411:intron | 55.0% |
| ! | GCCCCAGAACCTTTTGACGT+TGG | + | chr3.3:31543132-31543151 | MS.gene29411:CDS | 55.0% |
| !! | CCAGACAGAGAAGCGCTTCA+AGG | - | chr3.3:31542577-31542596 | None:intergenic | 55.0% |
| !! | CTAAACCGGCTTGTGAGGTG+AGG | - | chr3.3:31538162-31538181 | None:intergenic | 55.0% |
| !! | TCGGGGGCATTATTGGAGCA+AGG | - | chr3.3:31541363-31541382 | None:intergenic | 55.0% |
| AATTGGTTGAAGGGGGGGGG+GGG | + | chr3.3:31541773-31541792 | MS.gene29411:intron | 60.0% | |
| CCGGGCAGCAGTTCAAAGAG+TGG | + | chr3.3:31539524-31539543 | MS.gene29411:CDS | 60.0% | |
| GTACCGAGCAGCTCCACAGA+AGG | - | chr3.3:31538315-31538334 | None:intergenic | 60.0% | |
| GTTTGGGGGGACACTCACAG+AGG | + | chr3.3:31538510-31538529 | MS.gene29411:intron | 60.0% | |
| TCCTTAAAAGGGCGGGTGGC+GGG | + | chr3.3:31537972-31537991 | MS.gene29411:CDS | 60.0% | |
| TCGAGGAGGTGGGAATGCTG+CGG | + | chr3.3:31544074-31544093 | MS.gene29411:CDS | 60.0% | |
| TGGCCTTCTGTGGAGCTGCT+CGG | + | chr3.3:31538309-31538328 | MS.gene29411:intron | 60.0% | |
| ! | CTGCGGCGCAGGCACTATTT+TGG | + | chr3.3:31544091-31544110 | MS.gene29411:CDS | 60.0% |
| !! | CCCCACTAAACCGGCTTGTG+AGG | - | chr3.3:31538167-31538186 | None:intergenic | 60.0% |
| !! | GCGGGTGGCGGGAAGAAATA+AGG | + | chr3.3:31537983-31538002 | MS.gene29411:CDS | 60.0% |
| ATTGGTTGAAGGGGGGGGGG+GGG | + | chr3.3:31541774-31541793 | MS.gene29411:intron | 65.0% | |
| TAGGGGTGGGGTGGGGGTTT+GGG | + | chr3.3:31538494-31538513 | MS.gene29411:intron | 65.0% | |
| TTAGGGGTGGGGTGGGGGTT+TGG | + | chr3.3:31538493-31538512 | MS.gene29411:intron | 65.0% | |
| ! | TCCCGCCACCCGCCCTTTTA+AGG | - | chr3.3:31537976-31537995 | None:intergenic | 65.0% |
| AGGGGTGGGGTGGGGGTTTG+GGG | + | chr3.3:31538495-31538514 | MS.gene29411:intron | 70.0% | |
| AGGTGGGAATGCTGCGGCGC+AGG | + | chr3.3:31544080-31544099 | MS.gene29411:CDS | 70.0% | |
| TTGGTTGAAGGGGGGGGGGG+GGG | + | chr3.3:31541775-31541794 | MS.gene29411:intron | 70.0% | |
| GGGGTGGGGTGGGGGTTTGG+GGG | + | chr3.3:31538496-31538515 | MS.gene29411:intron | 75.0% | |
| GGGTGGGGTGGGGGTTTGGG+GGG | + | chr3.3:31538497-31538516 | MS.gene29411:intron | 75.0% | |
| TGGTTGAAGGGGGGGGGGGG+GGG | + | chr3.3:31541776-31541795 | MS.gene29411:intron | 75.0% | |
| ! | GGTTGAAGGGGGGGGGGGGG+GGG | + | chr3.3:31541777-31541796 | MS.gene29411:intron | 80.0% |
| ! | GTTGAAGGGGGGGGGGGGGG+GGG | + | chr3.3:31541778-31541797 | MS.gene29411:intron | 80.0% |
| ! | TTGAAGGGGGGGGGGGGGGG+GGG | + | chr3.3:31541779-31541798 | MS.gene29411:intron | 80.0% |
| ! | TGAAGGGGGGGGGGGGGGGG+GGG | + | chr3.3:31541780-31541799 | MS.gene29411:intron | 85.0% |
| ! | AAGGGGGGGGGGGGGGGGGG+GGG | + | chr3.3:31541782-31541801 | MS.gene29411:intron | 90.0% |
| ! | GAAGGGGGGGGGGGGGGGGG+GGG | + | chr3.3:31541781-31541800 | MS.gene29411:intron | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | + | chr3.3:31541783-31541802 | MS.gene29411:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 31537520 | 31544380 | 31537520 | ID=MS.gene29411 |
| chr3.3 | mRNA | 31537520 | 31544380 | 31537520 | ID=MS.gene29411.t1;Parent=MS.gene29411 |
| chr3.3 | exon | 31537520 | 31537789 | 31537520 | ID=MS.gene29411.t1.exon1;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31537520 | 31537789 | 31537520 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31537903 | 31538031 | 31537903 | ID=MS.gene29411.t1.exon2;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31537903 | 31538031 | 31537903 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31538784 | 31538876 | 31538784 | ID=MS.gene29411.t1.exon3;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31538784 | 31538876 | 31538784 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31539456 | 31539596 | 31539456 | ID=MS.gene29411.t1.exon4;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31539456 | 31539596 | 31539456 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31540381 | 31540449 | 31540381 | ID=MS.gene29411.t1.exon5;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31540381 | 31540449 | 31540381 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31541023 | 31541106 | 31541023 | ID=MS.gene29411.t1.exon6;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31541023 | 31541106 | 31541023 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31541270 | 31541450 | 31541270 | ID=MS.gene29411.t1.exon7;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31541270 | 31541450 | 31541270 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31543112 | 31543228 | 31543112 | ID=MS.gene29411.t1.exon8;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31543112 | 31543228 | 31543112 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31543401 | 31543459 | 31543401 | ID=MS.gene29411.t1.exon9;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31543401 | 31543459 | 31543401 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31543755 | 31543889 | 31543755 | ID=MS.gene29411.t1.exon10;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31543755 | 31543889 | 31543755 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31544063 | 31544212 | 31544063 | ID=MS.gene29411.t1.exon11;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31544063 | 31544212 | 31544063 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| chr3.3 | exon | 31544336 | 31544380 | 31544336 | ID=MS.gene29411.t1.exon12;Parent=MS.gene29411.t1 |
| chr3.3 | CDS | 31544336 | 31544380 | 31544336 | ID=cds.MS.gene29411.t1;Parent=MS.gene29411.t1 |
| Gene Sequence |
| Protein sequence |
