Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38829.t1 | XP_003624923.1 | 98.4 | 490 | 8 | 0 | 1 | 490 | 1 | 490 | 2.50E-266 | 927.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38829.t1 | Q8GX05 | 63.0 | 492 | 176 | 5 | 1 | 488 | 1 | 490 | 1.0e-167 | 591.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38829.t1 | G7L5U6 | 98.4 | 490 | 8 | 0 | 1 | 490 | 1 | 490 | 1.8e-266 | 927.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049227 | MS.gene38829 | 0.831556 | 1.56E-55 | -1.69E-46 |
| MS.gene049328 | MS.gene38829 | 0.81201 | 5.26E-51 | -1.69E-46 |
| MS.gene049418 | MS.gene38829 | 0.858143 | 1.01E-62 | -1.69E-46 |
| MS.gene049698 | MS.gene38829 | 0.82259 | 2.18E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene38829 | 0.80719 | 5.70E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene38829 | 0.800264 | 1.56E-48 | -1.69E-46 |
| MS.gene049989 | MS.gene38829 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene050071 | MS.gene38829 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene050297 | MS.gene38829 | 0.858501 | 7.89E-63 | -1.69E-46 |
| MS.gene050310 | MS.gene38829 | 0.838962 | 2.10E-57 | -1.69E-46 |
| MS.gene051018 | MS.gene38829 | 0.83613 | 1.12E-56 | -1.69E-46 |
| MS.gene051067 | MS.gene38829 | 0.832811 | 7.64E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene38829 | 0.839836 | 1.25E-57 | -1.69E-46 |
| MS.gene051648 | MS.gene38829 | 0.815998 | 6.93E-52 | -1.69E-46 |
| MS.gene051885 | MS.gene38829 | 0.831162 | 1.95E-55 | -1.69E-46 |
| MS.gene052731 | MS.gene38829 | 0.817783 | 2.76E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene38829 | 0.846414 | 2.21E-59 | -1.69E-46 |
| MS.gene053143 | MS.gene38829 | 0.801787 | 7.63E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene38829 | 0.866899 | 2.03E-65 | -1.69E-46 |
| MS.gene053171 | MS.gene38829 | 0.829617 | 4.66E-55 | -1.69E-46 |
| MS.gene053536 | MS.gene38829 | 0.885601 | 7.07E-72 | -1.69E-46 |
| MS.gene053538 | MS.gene38829 | 0.887611 | 1.23E-72 | -1.69E-46 |
| MS.gene053581 | MS.gene38829 | 0.813955 | 1.97E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene38829 | 0.805723 | 1.16E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene38829 | 0.857347 | 1.74E-62 | -1.69E-46 |
| MS.gene054643 | MS.gene38829 | 0.834759 | 2.49E-56 | -1.69E-46 |
| MS.gene054999 | MS.gene38829 | 0.816203 | 6.24E-52 | -1.69E-46 |
| MS.gene055331 | MS.gene38829 | 0.811364 | 7.27E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene38829 | 0.821668 | 3.57E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene38829 | 0.821581 | 3.74E-53 | -1.69E-46 |
| MS.gene055469 | MS.gene38829 | 0.808031 | 3.78E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene38829 | 0.877187 | 7.68E-69 | -1.69E-46 |
| MS.gene055580 | MS.gene38829 | -0.841944 | 3.49E-58 | -1.69E-46 |
| MS.gene055764 | MS.gene38829 | 0.896543 | 3.34E-76 | -1.69E-46 |
| MS.gene056043 | MS.gene38829 | -0.833858 | 4.19E-56 | -1.69E-46 |
| MS.gene057004 | MS.gene38829 | 0.801562 | 8.49E-49 | -1.69E-46 |
| MS.gene057082 | MS.gene38829 | 0.804364 | 2.24E-49 | -1.69E-46 |
| MS.gene058197 | MS.gene38829 | 0.808962 | 2.39E-50 | -1.69E-46 |
| MS.gene058198 | MS.gene38829 | 0.802567 | 5.28E-49 | -1.69E-46 |
| MS.gene058210 | MS.gene38829 | 0.801959 | 7.04E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene38829 | 0.806401 | 8.37E-50 | -1.69E-46 |
| MS.gene058909 | MS.gene38829 | 0.802132 | 6.49E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene38829 | 0.833038 | 6.71E-56 | -1.69E-46 |
| MS.gene059300 | MS.gene38829 | 0.839502 | 1.53E-57 | -1.69E-46 |
| MS.gene059424 | MS.gene38829 | 0.878354 | 3.01E-69 | -1.69E-46 |
| MS.gene059425 | MS.gene38829 | 0.80991 | 1.50E-50 | -1.69E-46 |
| MS.gene059426 | MS.gene38829 | 0.809975 | 1.45E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene38829 | 0.82123 | 4.51E-53 | -1.69E-46 |
| MS.gene06057 | MS.gene38829 | 0.866703 | 2.35E-65 | -1.69E-46 |
| MS.gene061007 | MS.gene38829 | 0.801987 | 6.95E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37577 | MS.gene38829 | PPI |
| MS.gene38829 | MS.gene70836 | PPI |
| MS.gene47011 | MS.gene38829 | PPI |
| MS.gene38829 | MS.gene016935 | PPI |
| MS.gene019020 | MS.gene38829 | PPI |
| MS.gene38829 | MS.gene03677 | PPI |
| MS.gene29411 | MS.gene38829 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38829.t1 | MTR_7g089090 | 98.367 | 490 | 8 | 0 | 1 | 490 | 1 | 490 | 0.0 | 996 |
| MS.gene38829.t1 | MTR_5g088860 | 58.896 | 489 | 199 | 2 | 1 | 488 | 1 | 488 | 0.0 | 600 |
| MS.gene38829.t1 | MTR_5g088860 | 58.896 | 489 | 199 | 2 | 1 | 488 | 23 | 510 | 0.0 | 599 |
| MS.gene38829.t1 | MTR_3g045180 | 57.460 | 496 | 197 | 4 | 1 | 487 | 1 | 491 | 0.0 | 569 |
| MS.gene38829.t1 | MTR_6g079040 | 93.220 | 118 | 6 | 2 | 96 | 212 | 46 | 162 | 4.54e-65 | 208 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38829.t1 | AT2G40820 | 63.083 | 493 | 176 | 4 | 1 | 488 | 1 | 492 | 0.0 | 635 |
| MS.gene38829.t1 | AT2G40820 | 63.083 | 493 | 176 | 4 | 1 | 488 | 1 | 492 | 0.0 | 635 |
| MS.gene38829.t1 | AT2G40820 | 63.083 | 493 | 176 | 4 | 1 | 488 | 26 | 517 | 0.0 | 635 |
| MS.gene38829.t1 | AT2G40820 | 64.211 | 475 | 166 | 3 | 17 | 488 | 31 | 504 | 0.0 | 628 |
| MS.gene38829.t1 | AT3G56480 | 63.008 | 492 | 176 | 5 | 1 | 488 | 1 | 490 | 0.0 | 615 |
| MS.gene38829.t1 | AT2G26770 | 59.918 | 489 | 194 | 2 | 1 | 488 | 1 | 488 | 0.0 | 607 |
| MS.gene38829.t1 | AT2G26770 | 59.918 | 489 | 194 | 2 | 1 | 488 | 1 | 488 | 0.0 | 607 |
| MS.gene38829.t1 | AT2G26770 | 59.918 | 489 | 194 | 2 | 1 | 488 | 1 | 488 | 0.0 | 607 |
| MS.gene38829.t1 | AT2G40820 | 64.230 | 383 | 133 | 3 | 109 | 488 | 1 | 382 | 2.86e-179 | 508 |
Find 103 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCATCTTGGTTTCAATTTC+AGG | 0.115704 | 7.1:-17379040 | None:intergenic |
| TAAGTTCTTGTCAAATTTAC+TGG | 0.236091 | 7.1:-17379260 | None:intergenic |
| GCTAAGAGAGGTTCCATCTT+TGG | 0.264435 | 7.1:+17379560 | MS.gene38829:CDS |
| TCCACATGGCTTCCGAGTCC+TGG | 0.274289 | 7.1:-17382010 | None:intergenic |
| AACTGCTTCCATTGGCATCT+TGG | 0.307156 | 7.1:-17379053 | None:intergenic |
| ACGCAGCGAAGGCACTATTT+TGG | 0.312084 | 7.1:+17382543 | MS.gene38829:CDS |
| CTTGTTCTGCTCTGACAAAT+TGG | 0.324613 | 7.1:-17379215 | None:intergenic |
| AATATGAACTCCGTGCTCTA+AGG | 0.326569 | 7.1:+17380912 | MS.gene38829:CDS |
| GTTAGATGGTTCTGAAGCTT+TGG | 0.333501 | 7.1:+17381128 | MS.gene38829:CDS |
| GGAAGCAGTTCCGCCTGTTT+CGG | 0.352408 | 7.1:+17379066 | MS.gene38829:CDS |
| TCTCATTCATATAAGTTAGA+TGG | 0.363370 | 7.1:+17381114 | MS.gene38829:CDS |
| AGAGCCTGCTGAGGATAATC+AGG | 0.371170 | 7.1:+17379156 | MS.gene38829:CDS |
| TGCTCTAGCACTCTCGATTT+CGG | 0.373790 | 7.1:-17380208 | None:intergenic |
| AAAATAGTACCTGCATTGTT+GGG | 0.381442 | 7.1:-17382405 | None:intergenic |
| AGGAGCATATATTGATTTGT+TGG | 0.381922 | 7.1:-17381805 | None:intergenic |
| GAACCTGTGGTTTAGAAGCT+TGG | 0.386227 | 7.1:-17380278 | None:intergenic |
| AGCTGGAGGGAAGTTATTTC+AGG | 0.386626 | 7.1:+17381240 | MS.gene38829:CDS |
| TTAGATGGTTCTGAAGCTTT+GGG | 0.388489 | 7.1:+17381129 | MS.gene38829:CDS |
| CTTTATTTCTTCCCGTAAAA+CGG | 0.394161 | 7.1:-17379635 | None:intergenic |
| TAAAATAGTACCTGCATTGT+TGG | 0.394534 | 7.1:-17382406 | None:intergenic |
| AAGCTCACATCGGCCGAAAC+AGG | 0.395391 | 7.1:-17379079 | None:intergenic |
| CTCCTGATCCCCTTGATGTT+GGG | 0.406838 | 7.1:+17381823 | MS.gene38829:CDS |
| GCAATCAAGAGCATGTTTCC+TGG | 0.407678 | 7.1:-17382639 | None:intergenic |
| TGCTACTACACTAGATCATC+TGG | 0.411513 | 7.1:-17382794 | None:intergenic |
| TTCAATTCAGCTTCAGAAAG+AGG | 0.415823 | 7.1:+17380961 | MS.gene38829:CDS |
| AGGCATTAATGTACCTTGCT+TGG | 0.420644 | 7.1:-17380577 | None:intergenic |
| GTAGTTATTTCTCAGATGAA+TGG | 0.432162 | 7.1:+17382283 | MS.gene38829:CDS |
| AACCTGTGGTTTAGAAGCTT+GGG | 0.442649 | 7.1:-17380277 | None:intergenic |
| CCACATGGCTTCCGAGTCCT+GGG | 0.446769 | 7.1:-17382009 | None:intergenic |
| TCAGCCCCTAGTTTATACTT+TGG | 0.447271 | 7.1:-17379118 | None:intergenic |
| TTTGACAGGTTGTGCTTGCT+GGG | 0.448744 | 7.1:+17382771 | MS.gene38829:intron |
| TCGATAACATCTTTCAAAGA+AGG | 0.451784 | 7.1:-17379181 | None:intergenic |
| AGAGCAGTGGTGCTGAGAAT+TGG | 0.452907 | 7.1:+17380225 | MS.gene38829:CDS |
| GAATGAGGATAAAGCTATGT+AGG | 0.453334 | 7.1:+17382350 | MS.gene38829:CDS |
| TGTGGCGAATGCTATCTCTA+TGG | 0.459226 | 7.1:+17379662 | MS.gene38829:CDS |
| CTCCCAACATCAAGGGGATC+AGG | 0.463688 | 7.1:-17381825 | None:intergenic |
| TTCTACTCATTCATTTAATG+TGG | 0.471514 | 7.1:+17382324 | MS.gene38829:CDS |
| GCTCCTGATCCCCTTGATGT+TGG | 0.472236 | 7.1:+17381822 | MS.gene38829:CDS |
| TTCTGAAGATGCTAAGAAGT+TGG | 0.479065 | 7.1:+17380158 | MS.gene38829:CDS |
| AATGAGGATAAAGCTATGTA+GGG | 0.479361 | 7.1:+17382351 | MS.gene38829:CDS |
| CATTTAATGTGGGGAGAATG+AGG | 0.487584 | 7.1:+17382335 | MS.gene38829:CDS |
| TCTATCTTTCTCTGATTCAA+AGG | 0.489736 | 7.1:-17382597 | None:intergenic |
| AGAACATGCCCCTCCAAAGA+TGG | 0.496492 | 7.1:-17379573 | None:intergenic |
| TCTACTCATTCATTTAATGT+GGG | 0.499771 | 7.1:+17382325 | MS.gene38829:CDS |
| AAGAGAGGTTCCATCTTTGG+AGG | 0.508874 | 7.1:+17379563 | MS.gene38829:CDS |
| TCTTGTCAAATTTACTGGCA+AGG | 0.508976 | 7.1:-17379255 | None:intergenic |
| TACCCAAGCTTCTAAACCAC+AGG | 0.513181 | 7.1:+17380275 | MS.gene38829:CDS |
| GGACCCTGATTATCCTCAGC+AGG | 0.515411 | 7.1:-17379160 | None:intergenic |
| ACATACATTAAAGTCGGTGT+TGG | 0.521000 | 7.1:-17382050 | None:intergenic |
| ACAACTAATCCAATTCAAAC+CGG | 0.523218 | 7.1:+17381894 | MS.gene38829:CDS |
| GCTTGTCATCTGAAGGCAGC+TGG | 0.524926 | 7.1:+17381223 | MS.gene38829:CDS |
| TCTTACTGTCAGGATGTGGA+TGG | 0.524962 | 7.1:+17380505 | MS.gene38829:intron |
| TGTGTAACAGTCCCAGGACT+CGG | 0.527899 | 7.1:+17381998 | MS.gene38829:intron |
| GGATAAAGCTATGTAGGGGT+TGG | 0.530530 | 7.1:+17382356 | MS.gene38829:CDS |
| CTGTCAGGATGTGGATGGAC+TGG | 0.531598 | 7.1:+17380510 | MS.gene38829:intron |
| TTTCAAAATGTTCATTTCAG+TGG | 0.532345 | 7.1:+17381196 | MS.gene38829:CDS |
| GTAACATTCTCCCAACATCA+AGG | 0.542030 | 7.1:-17381833 | None:intergenic |
| AGCACGGAGTTCATATTCCA+TGG | 0.542354 | 7.1:-17380906 | None:intergenic |
| ATATGAACTCCGTGCTCTAA+GGG | 0.544878 | 7.1:+17380913 | MS.gene38829:CDS |
| ACAATTTCAGGTTATGGCCA+TGG | 0.550932 | 7.1:+17380889 | MS.gene38829:intron |
| CTACTCATTCATTTAATGTG+GGG | 0.553606 | 7.1:+17382326 | MS.gene38829:CDS |
| GATTTACTCCCCAACAATGC+AGG | 0.553965 | 7.1:+17382396 | MS.gene38829:CDS |
| TAACATTCTCCCAACATCAA+GGG | 0.556328 | 7.1:-17381832 | None:intergenic |
| GATGCATTAGAATATTTGAA+AGG | 0.556679 | 7.1:+17379612 | MS.gene38829:CDS |
| ATGTTGCGATTATGATCGCC+AGG | 0.557650 | 7.1:+17382621 | MS.gene38829:CDS |
| ACAGGCGGAACTGCTTCCAT+TGG | 0.561023 | 7.1:-17379061 | None:intergenic |
| GTTAAGTTGACTCAGAATGA+AGG | 0.563615 | 7.1:+17379969 | MS.gene38829:CDS |
| GAATTTGATCCCTTAGAGCA+CGG | 0.571579 | 7.1:-17380922 | None:intergenic |
| AGCTGCTAAGCTGTCTAATG+AGG | 0.574964 | 7.1:+17379288 | MS.gene38829:CDS |
| GAGAATTGGAGAGGCACTTG+AGG | 0.575034 | 7.1:+17380239 | MS.gene38829:CDS |
| TTGCACGAATGAAGTGCCAC+AGG | 0.576560 | 7.1:+17381173 | MS.gene38829:CDS |
| AACAATGAGCAAGTGGGACA+AGG | 0.579888 | 7.1:+17381083 | MS.gene38829:CDS |
| TGTGGCACTTCATTCGTGCA+AGG | 0.583050 | 7.1:-17381171 | None:intergenic |
| TGGTATCGCTTGTCATCTGA+AGG | 0.583579 | 7.1:+17381216 | MS.gene38829:CDS |
| GGCAGCTAACAATGAGCAAG+TGG | 0.583821 | 7.1:+17381076 | MS.gene38829:intron |
| TGGATAACATACATTAAAGT+CGG | 0.584179 | 7.1:-17382056 | None:intergenic |
| GGGAAGAAATAAAGAGGATG+TGG | 0.585429 | 7.1:+17379644 | MS.gene38829:CDS |
| AGAGAGGTTCCATCTTTGGA+GGG | 0.586150 | 7.1:+17379564 | MS.gene38829:CDS |
| AATTGAAACCAAGATGCCAA+TGG | 0.586655 | 7.1:+17379045 | MS.gene38829:CDS |
| TGTCATCTGAAGGCAGCTGG+AGG | 0.592112 | 7.1:+17381226 | MS.gene38829:CDS |
| GTCATCTGAAGGCAGCTGGA+GGG | 0.595538 | 7.1:+17381227 | MS.gene38829:CDS |
| AAATAGTACCTGCATTGTTG+GGG | 0.601497 | 7.1:-17382404 | None:intergenic |
| CAAGTGGACATTGTCTCCGA+TGG | 0.603830 | 7.1:+17381855 | MS.gene38829:CDS |
| TTCATTTAATCTAAGCTATG+CGG | 0.605424 | 7.1:+17382500 | MS.gene38829:intron |
| TTCGGAGAAGTGCCTCCACA+TGG | 0.605645 | 7.1:-17382024 | None:intergenic |
| TGATGTCGGTAACGCAGCGA+AGG | 0.615698 | 7.1:+17382532 | MS.gene38829:CDS |
| AACATTCTCCCAACATCAAG+GGG | 0.616945 | 7.1:-17381831 | None:intergenic |
| TGCGGAGTCAGAAGTGATGT+CGG | 0.621220 | 7.1:+17382518 | MS.gene38829:CDS |
| AGGACTCGGAAGCCATGTGG+AGG | 0.624909 | 7.1:+17382012 | MS.gene38829:CDS |
| TGTGGATGGACTGGTAGAAG+AGG | 0.629824 | 7.1:+17380519 | MS.gene38829:CDS |
| CCCAGGACTCGGAAGCCATG+TGG | 0.630430 | 7.1:+17382009 | MS.gene38829:CDS |
| ATGAGGATAAAGCTATGTAG+GGG | 0.641370 | 7.1:+17382352 | MS.gene38829:CDS |
| CTCACATCGGCCGAAACAGG+CGG | 0.643932 | 7.1:-17379076 | None:intergenic |
| ATTGCTGCATCAGCCAAGCA+AGG | 0.646063 | 7.1:+17380564 | MS.gene38829:CDS |
| GAGAGGTTCCATCTTTGGAG+GGG | 0.650717 | 7.1:+17379565 | MS.gene38829:CDS |
| ACTGGTAGAAGAGGTTCAAG+AGG | 0.656039 | 7.1:+17380528 | MS.gene38829:CDS |
| ATTAGAAATAAAGCTCACAT+CGG | 0.661484 | 7.1:-17379089 | None:intergenic |
| GAGCCTGCTGAGGATAATCA+GGG | 0.663281 | 7.1:+17379157 | MS.gene38829:CDS |
| AATCGAGAGTGCTAGAGCAG+TGG | 0.666858 | 7.1:+17380212 | MS.gene38829:CDS |
| TGTTGGGAGAATGTTACAAG+TGG | 0.671295 | 7.1:+17381839 | MS.gene38829:CDS |
| AGTGGTGCTGAGAATTGGAG+AGG | 0.675606 | 7.1:+17380230 | MS.gene38829:CDS |
| GCAGCTAACAATGAGCAAGT+GGG | 0.683458 | 7.1:+17381077 | MS.gene38829:intron |
| AATTCAGGCAAAGCTAAGAG+AGG | 0.697316 | 7.1:+17379548 | MS.gene38829:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTAATATATTTTTAAGTA+TGG | - | chr7.1:17379930-17379949 | None:intergenic | 10.0% |
| !! | AAATGGAGTATAATTAAATT+AGG | - | chr7.1:17380600-17380619 | None:intergenic | 15.0% |
| !! | CTTAAAAATATATTAATCAC+AGG | + | chr7.1:17379932-17379951 | MS.gene38829:intron | 15.0% |
| !!! | TTGAATGAATTTTCTATTAT+AGG | - | chr7.1:17379339-17379358 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTGATTTTTGAC+AGG | + | chr7.1:17382757-17382776 | MS.gene38829:intron | 15.0% |
| !! | AAAAAGAAACTCATGAAATA+TGG | - | chr7.1:17379461-17379480 | None:intergenic | 20.0% |
| !! | AAAAATATATTAATCACAGG+TGG | + | chr7.1:17379935-17379954 | MS.gene38829:intron | 20.0% |
| !! | GTTGAAGTAAATGAATTAAT+AGG | - | chr7.1:17381697-17381716 | None:intergenic | 20.0% |
| !! | TAACAAACTTGAATAATGTA+AGG | - | chr7.1:17381399-17381418 | None:intergenic | 20.0% |
| !! | TATCCATATTGTATATGAAT+GGG | + | chr7.1:17380715-17380734 | MS.gene38829:intron | 20.0% |
| !! | TCATTGTCATTATCATAAAA+TGG | - | chr7.1:17380617-17380636 | None:intergenic | 20.0% |
| !!! | GAGAATTTTATAACAATTTC+AGG | + | chr7.1:17380877-17380896 | MS.gene38829:intron | 20.0% |
| !!! | TATTTCTATTTCATTTTCTG+TGG | + | chr7.1:17379746-17379765 | MS.gene38829:intron | 20.0% |
| !!! | TTAGTTTTTGTTTTTGGTTT+CGG | + | chr7.1:17381917-17381936 | MS.gene38829:intron | 20.0% |
| !!! | TTATTTTAGTTCTTAGTGTT+TGG | - | chr7.1:17380371-17380390 | None:intergenic | 20.0% |
| !!! | TTTATAACAATTTCAGGTTA+TGG | + | chr7.1:17380883-17380902 | MS.gene38829:intron | 20.0% |
| !!! | TTTTTGCTTTTATAAGCATT+TGG | + | chr7.1:17381618-17381637 | MS.gene38829:intron | 20.0% |
| !!! | TTTTTTATTTTGCACTTCAA+TGG | + | chr7.1:17379476-17379495 | MS.gene38829:intron | 20.0% |
| ! | AAAGGTCTTAGTATTTGTAA+TGG | + | chr7.1:17381305-17381324 | MS.gene38829:intron | 25.0% |
| ! | AAATAAAGAACTCAAACCAT+AGG | - | chr7.1:17382454-17382473 | None:intergenic | 25.0% |
| ! | AACCAAAAACAAAAACTAAC+CGG | - | chr7.1:17381916-17381935 | None:intergenic | 25.0% |
| ! | AAGTAATGTACTTAAGATCA+TGG | - | chr7.1:17379707-17379726 | None:intergenic | 25.0% |
| ! | AATTTAAAGAATAGGTCACT+TGG | - | chr7.1:17381595-17381614 | None:intergenic | 25.0% |
| ! | ACAAAATTGTATGAGATACT+TGG | - | chr7.1:17380779-17380798 | None:intergenic | 25.0% |
| ! | ACGATAATTTCTCTTATGTA+TGG | + | chr7.1:17381729-17381748 | MS.gene38829:intron | 25.0% |
| ! | ACTTTGTTCAATGTTTGAAA+TGG | + | chr7.1:17379723-17379742 | MS.gene38829:intron | 25.0% |
| ! | AGCATATTGTGAAAATTCAA+AGG | + | chr7.1:17381287-17381306 | MS.gene38829:intron | 25.0% |
| ! | ATAGTATACACTCTATGTTA+TGG | - | chr7.1:17380819-17380838 | None:intergenic | 25.0% |
| ! | ATCCATATTGTATATGAATG+GGG | + | chr7.1:17380716-17380735 | MS.gene38829:intron | 25.0% |
| ! | ATTAGAAATAAAGCTCACAT+CGG | - | chr7.1:17379092-17379111 | None:intergenic | 25.0% |
| ! | ATTATTGAATCTAAAGAGAG+TGG | - | chr7.1:17382079-17382098 | None:intergenic | 25.0% |
| ! | ATTCTTACGAAGTTTGTATT+TGG | + | chr7.1:17382250-17382269 | MS.gene38829:intron | 25.0% |
| ! | ATTTAAAGAATAGGTCACTT+GGG | - | chr7.1:17381594-17381613 | None:intergenic | 25.0% |
| ! | CATAGGAAAAAAAGAATACA+TGG | - | chr7.1:17382437-17382456 | None:intergenic | 25.0% |
| ! | CATCTAAAAGTAGAAAACAA+AGG | + | chr7.1:17381956-17381975 | MS.gene38829:intron | 25.0% |
| ! | CATGAAGAAAATGAAGTTAT+TGG | - | chr7.1:17381057-17381076 | None:intergenic | 25.0% |
| ! | CCAGAAGCAAATATAAATTA+TGG | - | chr7.1:17379316-17379335 | None:intergenic | 25.0% |
| ! | CCATAATTTATATTTGCTTC+TGG | + | chr7.1:17379313-17379332 | MS.gene38829:intron | 25.0% |
| ! | GATGCATTAGAATATTTGAA+AGG | + | chr7.1:17379612-17379631 | MS.gene38829:CDS | 25.0% |
| ! | GGATCAAATTCAAGAAAAAT+CGG | + | chr7.1:17380934-17380953 | MS.gene38829:CDS | 25.0% |
| ! | GTATCCATATTGTATATGAA+TGG | + | chr7.1:17380714-17380733 | MS.gene38829:intron | 25.0% |
| ! | TAAAGAGAAACATTTGCTTT+GGG | + | chr7.1:17382202-17382221 | MS.gene38829:intron | 25.0% |
| ! | TAAGTTCTTGTCAAATTTAC+TGG | - | chr7.1:17379263-17379282 | None:intergenic | 25.0% |
| ! | TACTGTGGAAGAAAAAAAAA+AGG | - | chr7.1:17380697-17380716 | None:intergenic | 25.0% |
| ! | TAGTATACACTCTATGTTAT+GGG | - | chr7.1:17380818-17380837 | None:intergenic | 25.0% |
| ! | TCTACTCATTCATTTAATGT+GGG | + | chr7.1:17382325-17382344 | MS.gene38829:CDS | 25.0% |
| ! | TCTCATTCATATAAGTTAGA+TGG | + | chr7.1:17381114-17381133 | MS.gene38829:CDS | 25.0% |
| ! | TGATACTTGTAAGTTGTATA+TGG | - | chr7.1:17381478-17381497 | None:intergenic | 25.0% |
| ! | TGGATAACATACATTAAAGT+CGG | - | chr7.1:17382059-17382078 | None:intergenic | 25.0% |
| ! | TTCATTTAATCTAAGCTATG+CGG | + | chr7.1:17382500-17382519 | MS.gene38829:intron | 25.0% |
| ! | TTCTACTCATTCATTTAATG+TGG | + | chr7.1:17382324-17382343 | MS.gene38829:CDS | 25.0% |
| ! | TTTCAAAATGTTCATTTCAG+TGG | + | chr7.1:17381196-17381215 | MS.gene38829:CDS | 25.0% |
| !! | AAAAAGTCATAACGTTTTGA+TGG | - | chr7.1:17380099-17380118 | None:intergenic | 25.0% |
| !! | AGTAACATTGATTGAATAAC+AGG | - | chr7.1:17379907-17379926 | None:intergenic | 25.0% |
| !! | AGTTTTCCAAAGTATAAACT+AGG | + | chr7.1:17379112-17379131 | MS.gene38829:CDS | 25.0% |
| !! | ATAATTTCGATAGTCTTTTG+CGG | - | chr7.1:17382115-17382134 | None:intergenic | 25.0% |
| !! | CAATAACTTCATTTTCTTCA+TGG | + | chr7.1:17381055-17381074 | MS.gene38829:intron | 25.0% |
| !! | CTTATTTGCCTTTATTTATC+AGG | + | chr7.1:17381780-17381799 | MS.gene38829:intron | 25.0% |
| !! | GCATACTTATTCTTTCATTT+TGG | + | chr7.1:17382706-17382725 | MS.gene38829:intron | 25.0% |
| !! | GGTATTCAGATCTTATATTT+TGG | - | chr7.1:17381356-17381375 | None:intergenic | 25.0% |
| !! | GTTTTCCAAAGTATAAACTA+GGG | + | chr7.1:17379113-17379132 | MS.gene38829:CDS | 25.0% |
| !! | TATGGTTTGAGTTCTTTATT+TGG | + | chr7.1:17382453-17382472 | MS.gene38829:intron | 25.0% |
| !! | TTTTCCAAAGTATAAACTAG+GGG | + | chr7.1:17379114-17379133 | MS.gene38829:CDS | 25.0% |
| !!! | AAAACGTTATGACTTTTTTC+TGG | + | chr7.1:17380101-17380120 | MS.gene38829:intron | 25.0% |
| !!! | CATGTATTCTTTTTTTCCTA+TGG | + | chr7.1:17382435-17382454 | MS.gene38829:intron | 25.0% |
| !!! | GTTTATTTTTCATGGAATTC+AGG | + | chr7.1:17379533-17379552 | MS.gene38829:intron | 25.0% |
| AAAATAGTACCTGCATTGTT+GGG | - | chr7.1:17382408-17382427 | None:intergenic | 30.0% | |
| AATGAGGATAAAGCTATGTA+GGG | + | chr7.1:17382351-17382370 | MS.gene38829:CDS | 30.0% | |
| ACAACTAATCCAATTCAAAC+CGG | + | chr7.1:17381894-17381913 | MS.gene38829:CDS | 30.0% | |
| AGATAAGTAGAAGAACATCA+AGG | - | chr7.1:17382183-17382202 | None:intergenic | 30.0% | |
| ATTGATATAAGCTCCAAAAG+AGG | - | chr7.1:17379820-17379839 | None:intergenic | 30.0% | |
| CAAATATGCAACCATCAAAT+TGG | - | chr7.1:17381757-17381776 | None:intergenic | 30.0% | |
| CATATACAATATGGATACTG+TGG | - | chr7.1:17380712-17380731 | None:intergenic | 30.0% | |
| CTAAAGAGAAACATTTGCTT+TGG | + | chr7.1:17382201-17382220 | MS.gene38829:intron | 30.0% | |
| CTACTCATTCATTTAATGTG+GGG | + | chr7.1:17382326-17382345 | MS.gene38829:CDS | 30.0% | |
| CTTTACTGCTATCTAATTTG+AGG | + | chr7.1:17381498-17381517 | MS.gene38829:intron | 30.0% | |
| TAAAATAGTACCTGCATTGT+TGG | - | chr7.1:17382409-17382428 | None:intergenic | 30.0% | |
| TCGATAACATCTTTCAAAGA+AGG | - | chr7.1:17379184-17379203 | None:intergenic | 30.0% | |
| TCTATCTTTCTCTGATTCAA+AGG | - | chr7.1:17382600-17382619 | None:intergenic | 30.0% | |
| TTCCCCATTCATATACAATA+TGG | - | chr7.1:17380721-17380740 | None:intergenic | 30.0% | |
| TTCTCGTACATTATTGTCTA+CGG | + | chr7.1:17382675-17382694 | MS.gene38829:intron | 30.0% | |
| TTGATATAAGCTCCAAAAGA+GGG | - | chr7.1:17379819-17379838 | None:intergenic | 30.0% | |
| ! | ATTTCATTTTCTGTGGTAAC+TGG | + | chr7.1:17379753-17379772 | MS.gene38829:intron | 30.0% |
| ! | CTTTATTTCTTCCCGTAAAA+CGG | - | chr7.1:17379638-17379657 | None:intergenic | 30.0% |
| ! | GCTTTTGAATTTTCTCAAAC+AGG | + | chr7.1:17380025-17380044 | MS.gene38829:CDS | 30.0% |
| ! | TTTCATTTTCTGTGGTAACT+GGG | + | chr7.1:17379754-17379773 | MS.gene38829:intron | 30.0% |
| ! | TTTTACGGGAAGAAATAAAG+AGG | + | chr7.1:17379638-17379657 | MS.gene38829:CDS | 30.0% |
| ! | TTTTGTGTTTTCTTACTGTC+AGG | + | chr7.1:17380495-17380514 | MS.gene38829:intron | 30.0% |
| !! | AAAAACTAACCGGTTTGAAT+TGG | - | chr7.1:17381906-17381925 | None:intergenic | 30.0% |
| !! | AGGAGCATATATTGATTTGT+TGG | - | chr7.1:17381808-17381827 | None:intergenic | 30.0% |
| !! | ATATTTGAAAGGCCGTTTTA+CGG | + | chr7.1:17379623-17379642 | MS.gene38829:CDS | 30.0% |
| !! | GCAAACTTTCACTATTTTGA+AGG | - | chr7.1:17380850-17380869 | None:intergenic | 30.0% |
| !! | GGTGATGTGTTTATTTTTCA+TGG | + | chr7.1:17379525-17379544 | MS.gene38829:intron | 30.0% |
| !! | GTAGTTATTTCTCAGATGAA+TGG | + | chr7.1:17382283-17382302 | MS.gene38829:CDS | 30.0% |
| !! | GTTTGTATTTGGTGTTATAC+AGG | + | chr7.1:17382261-17382280 | MS.gene38829:intron | 30.0% |
| !!! | AACCGGTTAGTTTTTGTTTT+TGG | + | chr7.1:17381911-17381930 | MS.gene38829:intron | 30.0% |
| !!! | AATGAACATTTTGAAACCTG+TGG | - | chr7.1:17381192-17381211 | None:intergenic | 30.0% |
| !!! | TAGTGTAAGTTTTTTGCCAT+CGG | - | chr7.1:17381874-17381893 | None:intergenic | 30.0% |
| !!! | TATTTTGGCAAGCAAGAAAA+GGG | + | chr7.1:17382558-17382577 | MS.gene38829:CDS | 30.0% |
| !!! | TGTTTTTTTCCCTCAACTTA+TGG | + | chr7.1:17379504-17379523 | MS.gene38829:intron | 30.0% |
| !!! | TTATATTTTGGCTAGATTCC+AGG | - | chr7.1:17381344-17381363 | None:intergenic | 30.0% |
| !!! | TTGGGAAATGGAGATTTTTT+TGG | + | chr7.1:17382220-17382239 | MS.gene38829:intron | 30.0% |
| AAACACATCACCATAAGTTG+AGG | - | chr7.1:17379517-17379536 | None:intergenic | 35.0% | |
| AAATAGTACCTGCATTGTTG+GGG | - | chr7.1:17382407-17382426 | None:intergenic | 35.0% | |
| AATTGAAACCAAGATGCCAA+TGG | + | chr7.1:17379045-17379064 | MS.gene38829:CDS | 35.0% | |
| AATTGTGCAATCAAACAGCA+TGG | - | chr7.1:17380308-17380327 | None:intergenic | 35.0% | |
| ACATACATTAAAGTCGGTGT+TGG | - | chr7.1:17382053-17382072 | None:intergenic | 35.0% | |
| AGAAACTCAAAAAGTCTGGA+AGG | - | chr7.1:17379791-17379810 | None:intergenic | 35.0% | |
| ATGAGGATAAAGCTATGTAG+GGG | + | chr7.1:17382352-17382371 | MS.gene38829:CDS | 35.0% | |
| CACAAAAAATGCATGCTTGA+AGG | - | chr7.1:17380482-17380501 | None:intergenic | 35.0% | |
| CTATCGAAATTATCACCTCA+AGG | + | chr7.1:17382122-17382141 | MS.gene38829:intron | 35.0% | |
| GAATGAGGATAAAGCTATGT+AGG | + | chr7.1:17382350-17382369 | MS.gene38829:CDS | 35.0% | |
| GCTGTTTGATTGCACAATTA+TGG | + | chr7.1:17380309-17380328 | MS.gene38829:intron | 35.0% | |
| TAACATTCTCCCAACATCAA+GGG | - | chr7.1:17381835-17381854 | None:intergenic | 35.0% | |
| TATGTATGGCTCCAATTTGA+TGG | + | chr7.1:17381743-17381762 | MS.gene38829:intron | 35.0% | |
| TATTCATATGATTCGCCTTG+AGG | - | chr7.1:17382140-17382159 | None:intergenic | 35.0% | |
| TATTGCGTTTCCACATTGTA+TGG | - | chr7.1:17381568-17381587 | None:intergenic | 35.0% | |
| TCTTGTCAAATTTACTGGCA+AGG | - | chr7.1:17379258-17379277 | None:intergenic | 35.0% | |
| TGATTCCATCTTTGTTCTAC+AGG | + | chr7.1:17380134-17380153 | MS.gene38829:intron | 35.0% | |
| TGTTGGCACCTGATAAATAA+AGG | - | chr7.1:17381791-17381810 | None:intergenic | 35.0% | |
| TTCAATTCAGCTTCAGAAAG+AGG | + | chr7.1:17380961-17380980 | MS.gene38829:CDS | 35.0% | |
| TTTCTATTAGACTCTCTCGA+CGG | - | chr7.1:17381020-17381039 | None:intergenic | 35.0% | |
| ! | AACACATCACCATAAGTTGA+GGG | - | chr7.1:17379516-17379535 | None:intergenic | 35.0% |
| ! | GATGTTTCCTTGATAATCCT+CGG | + | chr7.1:17381520-17381539 | MS.gene38829:intron | 35.0% |
| ! | GGTTTGAGTTCTTTATTTGG+CGG | + | chr7.1:17382456-17382475 | MS.gene38829:intron | 35.0% |
| ! | GTTCTGAATGATGTGAATTC+AGG | - | chr7.1:17381377-17381396 | None:intergenic | 35.0% |
| ! | TTCTGAAGATGCTAAGAAGT+TGG | + | chr7.1:17380158-17380177 | MS.gene38829:CDS | 35.0% |
| !! | GAAACATTTGCTTTGGGAAA+TGG | + | chr7.1:17382208-17382227 | MS.gene38829:intron | 35.0% |
| !! | GTTAAGTTGACTCAGAATGA+AGG | + | chr7.1:17379969-17379988 | MS.gene38829:CDS | 35.0% |
| !! | TATTTGAAAGGCCGTTTTAC+GGG | + | chr7.1:17379624-17379643 | MS.gene38829:CDS | 35.0% |
| !! | TGACAAAGAAAAAGCATCAG+AGG | - | chr7.1:17381665-17381684 | None:intergenic | 35.0% |
| !! | TTAGATGGTTCTGAAGCTTT+GGG | + | chr7.1:17381129-17381148 | MS.gene38829:CDS | 35.0% |
| !!! | CTATTTTGGCAAGCAAGAAA+AGG | + | chr7.1:17382557-17382576 | MS.gene38829:CDS | 35.0% |
| !!! | TAAAGTCGGTGTTGGATTTT+CGG | - | chr7.1:17382045-17382064 | None:intergenic | 35.0% |
| !!! | TCCAGACTTTTTGAGTTTCT+CGG | + | chr7.1:17379791-17379810 | MS.gene38829:intron | 35.0% |
| AACATTCTCCCAACATCAAG+GGG | - | chr7.1:17381834-17381853 | None:intergenic | 40.0% | |
| AACCTGTGGTTTAGAAGCTT+GGG | - | chr7.1:17380280-17380299 | None:intergenic | 40.0% | |
| AATATGAACTCCGTGCTCTA+AGG | + | chr7.1:17380912-17380931 | MS.gene38829:CDS | 40.0% | |
| AATGGTCTTCGTATTTGACC+TGG | + | chr7.1:17381323-17381342 | MS.gene38829:intron | 40.0% | |
| AATTCAGGCAAAGCTAAGAG+AGG | + | chr7.1:17379548-17379567 | MS.gene38829:intron | 40.0% | |
| AGAAGCCTGTAGAACAAAGA+TGG | - | chr7.1:17380142-17380161 | None:intergenic | 40.0% | |
| AGGCATTAATGTACCTTGCT+TGG | - | chr7.1:17380580-17380599 | None:intergenic | 40.0% | |
| ATATGAACTCCGTGCTCTAA+GGG | + | chr7.1:17380913-17380932 | MS.gene38829:CDS | 40.0% | |
| CATTTAATGTGGGGAGAATG+AGG | + | chr7.1:17382335-17382354 | MS.gene38829:CDS | 40.0% | |
| CTTGTTCTGCTCTGACAAAT+TGG | - | chr7.1:17379218-17379237 | None:intergenic | 40.0% | |
| GAATTTGATCCCTTAGAGCA+CGG | - | chr7.1:17380925-17380944 | None:intergenic | 40.0% | |
| GGACTATGCAGATTTCTACT+TGG | - | chr7.1:17381547-17381566 | None:intergenic | 40.0% | |
| GGCATCTTGGTTTCAATTTC+AGG | - | chr7.1:17379043-17379062 | None:intergenic | 40.0% | |
| GGGAAGAAATAAAGAGGATG+TGG | + | chr7.1:17379644-17379663 | MS.gene38829:CDS | 40.0% | |
| GTAACATTCTCCCAACATCA+AGG | - | chr7.1:17381836-17381855 | None:intergenic | 40.0% | |
| TCAGCCCCTAGTTTATACTT+TGG | - | chr7.1:17379121-17379140 | None:intergenic | 40.0% | |
| TCTGCATAGTCCATACAATG+TGG | + | chr7.1:17381555-17381574 | MS.gene38829:intron | 40.0% | |
| TGTTGGGAGAATGTTACAAG+TGG | + | chr7.1:17381839-17381858 | MS.gene38829:CDS | 40.0% | |
| ! | GTTTTCTTACTGTCAGGATG+TGG | + | chr7.1:17380501-17380520 | MS.gene38829:intron | 40.0% |
| !! | AAAAAGCATCAGAGGTATCG+AGG | - | chr7.1:17381657-17381676 | None:intergenic | 40.0% |
| !! | ACAATTTCAGGTTATGGCCA+TGG | + | chr7.1:17380889-17380908 | MS.gene38829:intron | 40.0% |
| !! | GTTAGATGGTTCTGAAGCTT+TGG | + | chr7.1:17381128-17381147 | MS.gene38829:CDS | 40.0% |
| AACAATGAGCAAGTGGGACA+AGG | + | chr7.1:17381083-17381102 | MS.gene38829:CDS | 45.0% | |
| AACTGCTTCCATTGGCATCT+TGG | - | chr7.1:17379056-17379075 | None:intergenic | 45.0% | |
| AAGAGAGGTTCCATCTTTGG+AGG | + | chr7.1:17379563-17379582 | MS.gene38829:CDS | 45.0% | |
| ACTGGTAGAAGAGGTTCAAG+AGG | + | chr7.1:17380528-17380547 | MS.gene38829:CDS | 45.0% | |
| ACTTGGACCGAGGATTATCA+AGG | - | chr7.1:17381530-17381549 | None:intergenic | 45.0% | |
| AGAGAGGTTCCATCTTTGGA+GGG | + | chr7.1:17379564-17379583 | MS.gene38829:CDS | 45.0% | |
| AGCACGGAGTTCATATTCCA+TGG | - | chr7.1:17380909-17380928 | None:intergenic | 45.0% | |
| AGCTGCTAAGCTGTCTAATG+AGG | + | chr7.1:17379288-17379307 | MS.gene38829:CDS | 45.0% | |
| ATCTTGTGTGTAACAGTCCC+AGG | + | chr7.1:17381992-17382011 | MS.gene38829:intron | 45.0% | |
| ATGTTGCGATTATGATCGCC+AGG | + | chr7.1:17382621-17382640 | MS.gene38829:CDS | 45.0% | |
| GAACCTGTGGTTTAGAAGCT+TGG | - | chr7.1:17380281-17380300 | None:intergenic | 45.0% | |
| GATTTACTCCCCAACAATGC+AGG | + | chr7.1:17382396-17382415 | MS.gene38829:CDS | 45.0% | |
| GCAGCTAACAATGAGCAAGT+GGG | + | chr7.1:17381077-17381096 | MS.gene38829:intron | 45.0% | |
| GCCGAGAAACTCAAAAAGTC+TGG | - | chr7.1:17379795-17379814 | None:intergenic | 45.0% | |
| GCTAAGAGAGGTTCCATCTT+TGG | + | chr7.1:17379560-17379579 | MS.gene38829:CDS | 45.0% | |
| GGATAAAGCTATGTAGGGGT+TGG | + | chr7.1:17382356-17382375 | MS.gene38829:CDS | 45.0% | |
| GGGACTGTTACACACAAGAT+AGG | - | chr7.1:17381992-17382011 | None:intergenic | 45.0% | |
| TACCCAAGCTTCTAAACCAC+AGG | + | chr7.1:17380275-17380294 | MS.gene38829:CDS | 45.0% | |
| TCTTACTGTCAGGATGTGGA+TGG | + | chr7.1:17380505-17380524 | MS.gene38829:intron | 45.0% | |
| TGCTCTAGCACTCTCGATTT+CGG | - | chr7.1:17380211-17380230 | None:intergenic | 45.0% | |
| TGGTATCGCTTGTCATCTGA+AGG | + | chr7.1:17381216-17381235 | MS.gene38829:CDS | 45.0% | |
| TGTGGCGAATGCTATCTCTA+TGG | + | chr7.1:17379662-17379681 | MS.gene38829:CDS | 45.0% | |
| TTTGACAGGTTGTGCTTGCT+GGG | + | chr7.1:17382771-17382790 | MS.gene38829:intron | 45.0% | |
| ! | AGCTGGAGGGAAGTTATTTC+AGG | + | chr7.1:17381240-17381259 | MS.gene38829:CDS | 45.0% |
| ! | GCAATCAAGAGCATGTTTCC+TGG | - | chr7.1:17382642-17382661 | None:intergenic | 45.0% |
| ! | TTTTGACAGGTTGTGCTTGC+TGG | + | chr7.1:17382770-17382789 | MS.gene38829:intron | 45.0% |
| !!! | AGTTTTTCAAGAGCCTGCTG+AGG | + | chr7.1:17379147-17379166 | MS.gene38829:CDS | 45.0% |
| !!! | AAAAATTTAATTTAAAGAAT+AGG | - | chr7.1:17381603-17381622 | None:intergenic | 5.0% |
| ACAGCATGGTGTAGAACCTG+TGG | - | chr7.1:17380294-17380313 | None:intergenic | 50.0% | |
| AGAACATGCCCCTCCAAAGA+TGG | - | chr7.1:17379576-17379595 | None:intergenic | 50.0% | |
| AGAGCCTGCTGAGGATAATC+AGG | + | chr7.1:17379156-17379175 | MS.gene38829:CDS | 50.0% | |
| ATTGCTGCATCAGCCAAGCA+AGG | + | chr7.1:17380564-17380583 | MS.gene38829:CDS | 50.0% | |
| CAAGTGGACATTGTCTCCGA+TGG | + | chr7.1:17381855-17381874 | MS.gene38829:CDS | 50.0% | |
| CTCCTGATCCCCTTGATGTT+GGG | + | chr7.1:17381823-17381842 | MS.gene38829:CDS | 50.0% | |
| GAGCCTGCTGAGGATAATCA+GGG | + | chr7.1:17379157-17379176 | MS.gene38829:CDS | 50.0% | |
| GCAGATTTCTACTTGGACCG+AGG | - | chr7.1:17381540-17381559 | None:intergenic | 50.0% | |
| GGCAGCTAACAATGAGCAAG+TGG | + | chr7.1:17381076-17381095 | MS.gene38829:intron | 50.0% | |
| TGCGGAGTCAGAAGTGATGT+CGG | + | chr7.1:17382518-17382537 | MS.gene38829:CDS | 50.0% | |
| TGTGGCACTTCATTCGTGCA+AGG | - | chr7.1:17381174-17381193 | None:intergenic | 50.0% | |
| TGTGTAACAGTCCCAGGACT+CGG | + | chr7.1:17381998-17382017 | MS.gene38829:intron | 50.0% | |
| ! | AGAGCAGTGGTGCTGAGAAT+TGG | + | chr7.1:17380225-17380244 | MS.gene38829:CDS | 50.0% |
| ! | AGTGGTGCTGAGAATTGGAG+AGG | + | chr7.1:17380230-17380249 | MS.gene38829:CDS | 50.0% |
| ! | AGTTTCTCGGCTCCCTCTTT+TGG | + | chr7.1:17379804-17379823 | MS.gene38829:intron | 50.0% |
| ! | GAGAGGTTCCATCTTTGGAG+GGG | + | chr7.1:17379565-17379584 | MS.gene38829:CDS | 50.0% |
| ! | TTGCACGAATGAAGTGCCAC+AGG | + | chr7.1:17381173-17381192 | MS.gene38829:CDS | 50.0% |
| !! | AATCGAGAGTGCTAGAGCAG+TGG | + | chr7.1:17380212-17380231 | MS.gene38829:CDS | 50.0% |
| !! | GAGAATTGGAGAGGCACTTG+AGG | + | chr7.1:17380239-17380258 | MS.gene38829:CDS | 50.0% |
| !! | TGTGGATGGACTGGTAGAAG+AGG | + | chr7.1:17380519-17380538 | MS.gene38829:CDS | 50.0% |
| !!! | ACGCAGCGAAGGCACTATTT+TGG | + | chr7.1:17382543-17382562 | MS.gene38829:CDS | 50.0% |
| AAGCTCACATCGGCCGAAAC+AGG | - | chr7.1:17379082-17379101 | None:intergenic | 55.0% | |
| ACAGGCGGAACTGCTTCCAT+TGG | - | chr7.1:17379064-17379083 | None:intergenic | 55.0% | |
| CTCCCAACATCAAGGGGATC+AGG | - | chr7.1:17381828-17381847 | None:intergenic | 55.0% | |
| CTGTCAGGATGTGGATGGAC+TGG | + | chr7.1:17380510-17380529 | MS.gene38829:intron | 55.0% | |
| GCTCCTGATCCCCTTGATGT+TGG | + | chr7.1:17381822-17381841 | MS.gene38829:CDS | 55.0% | |
| GCTTGTCATCTGAAGGCAGC+TGG | + | chr7.1:17381223-17381242 | MS.gene38829:CDS | 55.0% | |
| GGAAGCAGTTCCGCCTGTTT+CGG | + | chr7.1:17379066-17379085 | MS.gene38829:CDS | 55.0% | |
| GGACCCTGATTATCCTCAGC+AGG | - | chr7.1:17379163-17379182 | None:intergenic | 55.0% | |
| GTCATCTGAAGGCAGCTGGA+GGG | + | chr7.1:17381227-17381246 | MS.gene38829:CDS | 55.0% | |
| TGATGTCGGTAACGCAGCGA+AGG | + | chr7.1:17382532-17382551 | MS.gene38829:CDS | 55.0% | |
| TGTCATCTGAAGGCAGCTGG+AGG | + | chr7.1:17381226-17381245 | MS.gene38829:CDS | 55.0% | |
| !! | TTCGGAGAAGTGCCTCCACA+TGG | - | chr7.1:17382027-17382046 | None:intergenic | 55.0% |
| AGGACTCGGAAGCCATGTGG+AGG | + | chr7.1:17382012-17382031 | MS.gene38829:CDS | 60.0% | |
| CCACATGGCTTCCGAGTCCT+GGG | - | chr7.1:17382012-17382031 | None:intergenic | 60.0% | |
| CTCACATCGGCCGAAACAGG+CGG | - | chr7.1:17379079-17379098 | None:intergenic | 60.0% | |
| TCCACATGGCTTCCGAGTCC+TGG | - | chr7.1:17382013-17382032 | None:intergenic | 60.0% | |
| CCCAGGACTCGGAAGCCATG+TGG | + | chr7.1:17382009-17382028 | MS.gene38829:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 17379025 | 17382811 | 17379025 | ID=MS.gene38829 |
| chr7.1 | mRNA | 17379025 | 17382811 | 17379025 | ID=MS.gene38829.t1;Parent=MS.gene38829 |
| chr7.1 | exon | 17379025 | 17379309 | 17379025 | ID=MS.gene38829.t1.exon1;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17379025 | 17379309 | 17379025 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17379555 | 17379683 | 17379555 | ID=MS.gene38829.t1.exon2;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17379555 | 17379683 | 17379555 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17379954 | 17380046 | 17379954 | ID=MS.gene38829.t1.exon3;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17379954 | 17380046 | 17379954 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17380156 | 17380296 | 17380156 | ID=MS.gene38829.t1.exon4;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17380156 | 17380296 | 17380156 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17380517 | 17380585 | 17380517 | ID=MS.gene38829.t1.exon5;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17380517 | 17380585 | 17380517 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17380899 | 17380982 | 17380899 | ID=MS.gene38829.t1.exon6;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17380899 | 17380982 | 17380899 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17381081 | 17381261 | 17381081 | ID=MS.gene38829.t1.exon7;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17381081 | 17381261 | 17381081 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17381802 | 17381915 | 17381802 | ID=MS.gene38829.t1.exon8;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17381802 | 17381915 | 17381802 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17382008 | 17382066 | 17382008 | ID=MS.gene38829.t1.exon9;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17382008 | 17382066 | 17382008 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17382283 | 17382417 | 17382283 | ID=MS.gene38829.t1.exon10;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17382283 | 17382417 | 17382283 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17382515 | 17382664 | 17382515 | ID=MS.gene38829.t1.exon11;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17382515 | 17382664 | 17382515 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| chr7.1 | exon | 17382779 | 17382811 | 17382779 | ID=MS.gene38829.t1.exon12;Parent=MS.gene38829.t1 |
| chr7.1 | CDS | 17382779 | 17382811 | 17382779 | ID=cds.MS.gene38829.t1;Parent=MS.gene38829.t1 |
| Gene Sequence |
| Protein sequence |
