Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29528.t1 | XP_003616489.2 | 93.3 | 435 | 26 | 3 | 1 | 434 | 1 | 433 | 8.70E-231 | 809.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29528.t1 | Q6XBF8 | 51.2 | 432 | 204 | 6 | 6 | 434 | 9 | 436 | 7.7e-119 | 428.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29528.t1 | G7K1Z4 | 93.3 | 435 | 26 | 3 | 1 | 434 | 1 | 433 | 6.3e-231 | 809.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene013256 | MS.gene29528 | PPI |
MS.gene06341 | MS.gene29528 | PPI |
MS.gene049227 | MS.gene29528 | PPI |
MS.gene40949 | MS.gene29528 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29528.t1 | MTR_5g080890 | 93.119 | 436 | 27 | 3 | 1 | 435 | 1 | 434 | 0.0 | 824 |
MS.gene29528.t1 | MTR_5g080960 | 93.119 | 436 | 27 | 3 | 1 | 435 | 1 | 434 | 0.0 | 823 |
MS.gene29528.t1 | MTR_8g096990 | 75.862 | 435 | 102 | 2 | 1 | 435 | 1 | 432 | 0.0 | 678 |
MS.gene29528.t1 | MTR_8g038280 | 71.689 | 438 | 119 | 2 | 1 | 435 | 1 | 436 | 0.0 | 639 |
MS.gene29528.t1 | MTR_5g044770 | 71.954 | 435 | 118 | 3 | 1 | 435 | 1 | 431 | 0.0 | 634 |
MS.gene29528.t1 | MTR_8g038250 | 71.071 | 439 | 100 | 3 | 1 | 435 | 1 | 416 | 0.0 | 620 |
MS.gene29528.t1 | MTR_6g090290 | 68.950 | 438 | 130 | 3 | 1 | 434 | 1 | 436 | 0.0 | 604 |
MS.gene29528.t1 | MTR_4g109760 | 69.195 | 435 | 98 | 4 | 1 | 435 | 1 | 399 | 0.0 | 558 |
MS.gene29528.t1 | MTR_8g038310 | 61.839 | 435 | 143 | 4 | 1 | 434 | 1 | 413 | 0.0 | 545 |
MS.gene29528.t1 | MTR_3g028120 | 54.436 | 417 | 181 | 6 | 25 | 434 | 24 | 438 | 1.25e-152 | 440 |
MS.gene29528.t1 | MTR_5g038360 | 51.598 | 438 | 199 | 8 | 5 | 435 | 6 | 437 | 3.69e-148 | 429 |
MS.gene29528.t1 | MTR_2g067830 | 54.390 | 410 | 176 | 8 | 32 | 434 | 1 | 406 | 1.17e-142 | 413 |
MS.gene29528.t1 | MTR_6g088760 | 54.187 | 406 | 176 | 7 | 1 | 398 | 1 | 404 | 4.95e-142 | 416 |
MS.gene29528.t1 | MTR_0024s0040 | 53.253 | 415 | 179 | 9 | 30 | 434 | 1 | 410 | 8.79e-135 | 394 |
MS.gene29528.t1 | MTR_5g044570 | 48.416 | 442 | 189 | 11 | 1 | 434 | 1 | 411 | 7.42e-131 | 384 |
MS.gene29528.t1 | MTR_2g105300 | 51.351 | 407 | 165 | 9 | 32 | 431 | 1 | 381 | 1.68e-130 | 381 |
MS.gene29528.t1 | MTR_0036s0070 | 42.529 | 435 | 225 | 12 | 11 | 435 | 8 | 427 | 2.37e-109 | 329 |
MS.gene29528.t1 | MTR_0036s0050 | 42.597 | 439 | 226 | 12 | 11 | 434 | 8 | 435 | 1.45e-106 | 322 |
MS.gene29528.t1 | MTR_0036s0110 | 41.060 | 453 | 237 | 10 | 1 | 434 | 1 | 442 | 3.79e-105 | 319 |
MS.gene29528.t1 | MTR_5g008070 | 43.301 | 418 | 217 | 9 | 21 | 433 | 23 | 425 | 4.35e-103 | 313 |
MS.gene29528.t1 | MTR_2g059490 | 48.023 | 354 | 176 | 7 | 87 | 434 | 59 | 410 | 6.29e-102 | 311 |
MS.gene29528.t1 | MTR_2g059460 | 42.143 | 420 | 197 | 12 | 23 | 434 | 25 | 406 | 4.51e-95 | 292 |
MS.gene29528.t1 | MTR_5g008110 | 43.944 | 355 | 189 | 7 | 85 | 434 | 66 | 415 | 2.67e-93 | 288 |
MS.gene29528.t1 | MTR_5g008150 | 40.314 | 382 | 217 | 7 | 59 | 434 | 36 | 412 | 1.46e-92 | 286 |
MS.gene29528.t1 | MTR_3g097150 | 37.647 | 425 | 241 | 12 | 22 | 434 | 36 | 448 | 3.26e-83 | 263 |
MS.gene29528.t1 | MTR_1g060750 | 35.980 | 403 | 222 | 9 | 40 | 434 | 2 | 376 | 3.00e-72 | 232 |
MS.gene29528.t1 | MTR_4g045857 | 42.484 | 306 | 139 | 8 | 14 | 312 | 13 | 288 | 4.68e-66 | 213 |
MS.gene29528.t1 | MTR_5g008090 | 40.468 | 299 | 167 | 7 | 142 | 434 | 21 | 314 | 2.65e-65 | 212 |
MS.gene29528.t1 | MTR_7g117430 | 37.950 | 361 | 195 | 11 | 85 | 432 | 140 | 484 | 6.04e-59 | 200 |
MS.gene29528.t1 | MTR_1g115210 | 33.488 | 430 | 252 | 15 | 21 | 432 | 73 | 486 | 2.49e-57 | 196 |
MS.gene29528.t1 | MTR_1g039270 | 34.174 | 436 | 232 | 17 | 28 | 432 | 58 | 469 | 1.32e-56 | 194 |
MS.gene29528.t1 | MTR_2g028190 | 34.803 | 431 | 245 | 16 | 28 | 432 | 31 | 451 | 1.93e-53 | 185 |
MS.gene29528.t1 | MTR_6g088765 | 43.028 | 251 | 104 | 5 | 160 | 407 | 3 | 217 | 2.80e-53 | 178 |
MS.gene29528.t1 | MTR_1g111350 | 33.652 | 419 | 238 | 14 | 21 | 432 | 82 | 467 | 5.04e-52 | 181 |
MS.gene29528.t1 | MTR_6g085010 | 34.857 | 350 | 209 | 11 | 87 | 432 | 157 | 491 | 3.63e-49 | 174 |
MS.gene29528.t1 | MTR_8g103880 | 32.486 | 354 | 216 | 12 | 87 | 432 | 117 | 455 | 2.10e-45 | 164 |
MS.gene29528.t1 | MTR_3g046300 | 28.821 | 458 | 281 | 12 | 11 | 435 | 16 | 461 | 8.60e-45 | 162 |
MS.gene29528.t1 | MTR_5g091130 | 32.808 | 381 | 228 | 11 | 74 | 432 | 179 | 553 | 1.57e-41 | 155 |
MS.gene29528.t1 | MTR_3g053710 | 33.425 | 362 | 216 | 11 | 85 | 432 | 116 | 466 | 1.60e-41 | 153 |
MS.gene29528.t1 | MTR_4g007740 | 32.231 | 363 | 213 | 13 | 87 | 433 | 133 | 478 | 2.46e-41 | 153 |
MS.gene29528.t1 | MTR_2g055840 | 29.211 | 380 | 233 | 13 | 78 | 432 | 5 | 373 | 2.31e-39 | 145 |
MS.gene29528.t1 | MTR_3g068000 | 28.165 | 387 | 220 | 14 | 89 | 435 | 76 | 444 | 1.40e-33 | 131 |
MS.gene29528.t1 | MTR_7g080230 | 26.906 | 446 | 263 | 17 | 30 | 435 | 11 | 433 | 8.63e-32 | 126 |
MS.gene29528.t1 | MTR_2g070430 | 27.460 | 437 | 271 | 17 | 28 | 429 | 25 | 450 | 9.33e-32 | 126 |
MS.gene29528.t1 | MTR_7g062360 | 29.243 | 383 | 213 | 17 | 89 | 432 | 62 | 425 | 1.18e-31 | 125 |
MS.gene29528.t1 | MTR_1g078240 | 27.865 | 384 | 230 | 17 | 81 | 433 | 63 | 430 | 7.41e-30 | 121 |
MS.gene29528.t1 | MTR_3g053980 | 31.285 | 358 | 223 | 10 | 85 | 432 | 141 | 485 | 1.64e-29 | 120 |
MS.gene29528.t1 | MTR_7g021510 | 27.179 | 390 | 240 | 17 | 73 | 435 | 64 | 436 | 2.83e-29 | 119 |
MS.gene29528.t1 | MTR_2g063110 | 27.665 | 394 | 237 | 11 | 85 | 432 | 117 | 508 | 3.56e-29 | 119 |
MS.gene29528.t1 | MTR_1g078240 | 28.497 | 386 | 226 | 18 | 81 | 433 | 63 | 431 | 3.96e-29 | 119 |
MS.gene29528.t1 | MTR_4g008110 | 52.991 | 117 | 31 | 1 | 158 | 274 | 45 | 137 | 5.28e-28 | 108 |
MS.gene29528.t1 | MTR_8g094590 | 27.926 | 376 | 222 | 16 | 85 | 433 | 72 | 425 | 5.33e-28 | 115 |
MS.gene29528.t1 | MTR_6g084710 | 27.619 | 420 | 248 | 20 | 49 | 432 | 151 | 550 | 1.80e-27 | 115 |
MS.gene29528.t1 | MTR_8g094590 | 32.950 | 261 | 143 | 10 | 85 | 335 | 72 | 310 | 1.31e-26 | 109 |
MS.gene29528.t1 | MTR_2g084550 | 30.423 | 378 | 219 | 16 | 85 | 433 | 76 | 438 | 3.85e-26 | 110 |
MS.gene29528.t1 | MTR_8g094590 | 30.851 | 282 | 161 | 11 | 85 | 354 | 72 | 331 | 4.77e-26 | 109 |
MS.gene29528.t1 | MTR_7g105850 | 26.789 | 489 | 278 | 21 | 2 | 435 | 5 | 468 | 6.61e-26 | 109 |
MS.gene29528.t1 | MTR_3g065160 | 26.486 | 370 | 232 | 14 | 88 | 434 | 76 | 428 | 9.35e-26 | 108 |
MS.gene29528.t1 | MTR_6g084710 | 28.916 | 332 | 201 | 15 | 49 | 365 | 151 | 462 | 1.46e-25 | 109 |
MS.gene29528.t1 | MTR_1g037630 | 28.169 | 426 | 265 | 16 | 26 | 433 | 27 | 429 | 2.37e-25 | 107 |
MS.gene29528.t1 | MTR_1g078240 | 29.560 | 318 | 183 | 15 | 81 | 373 | 63 | 364 | 2.66e-25 | 107 |
MS.gene29528.t1 | MTR_4g095270 | 25.341 | 367 | 237 | 12 | 85 | 434 | 79 | 425 | 3.16e-25 | 108 |
MS.gene29528.t1 | MTR_4g095270 | 25.341 | 367 | 237 | 12 | 85 | 434 | 79 | 425 | 3.54e-25 | 108 |
MS.gene29528.t1 | MTR_3g087780 | 26.164 | 451 | 260 | 18 | 28 | 432 | 27 | 450 | 3.81e-25 | 108 |
MS.gene29528.t1 | MTR_5g016260 | 24.932 | 369 | 236 | 12 | 85 | 434 | 87 | 433 | 5.36e-25 | 107 |
MS.gene29528.t1 | MTR_1g061940 | 28.912 | 377 | 231 | 16 | 85 | 435 | 82 | 447 | 7.66e-25 | 107 |
MS.gene29528.t1 | MTR_5g016260 | 24.932 | 369 | 236 | 12 | 85 | 434 | 87 | 433 | 7.82e-25 | 107 |
MS.gene29528.t1 | MTR_0945s0010 | 42.742 | 124 | 69 | 2 | 311 | 433 | 1 | 123 | 9.62e-25 | 100 |
MS.gene29528.t1 | MTR_4g023650 | 27.595 | 395 | 227 | 19 | 75 | 434 | 51 | 421 | 1.14e-24 | 105 |
MS.gene29528.t1 | MTR_4g056420 | 29.058 | 382 | 218 | 18 | 85 | 433 | 76 | 437 | 1.32e-24 | 106 |
MS.gene29528.t1 | MTR_1g029810 | 26.190 | 378 | 229 | 18 | 85 | 434 | 56 | 411 | 1.77e-24 | 105 |
MS.gene29528.t1 | MTR_3g096930 | 25.594 | 379 | 230 | 15 | 85 | 435 | 83 | 437 | 1.97e-24 | 105 |
MS.gene29528.t1 | MTR_1g029810 | 26.190 | 378 | 229 | 18 | 85 | 434 | 56 | 411 | 2.21e-24 | 105 |
MS.gene29528.t1 | MTR_8g075090 | 29.032 | 372 | 207 | 19 | 92 | 434 | 118 | 461 | 5.17e-24 | 104 |
MS.gene29528.t1 | MTR_5g022880 | 26.179 | 424 | 254 | 16 | 45 | 432 | 61 | 461 | 1.66e-23 | 103 |
MS.gene29528.t1 | MTR_8g075090 | 28.919 | 370 | 206 | 19 | 92 | 432 | 118 | 459 | 2.02e-23 | 102 |
MS.gene29528.t1 | MTR_4g023630 | 26.531 | 392 | 235 | 17 | 75 | 434 | 51 | 421 | 3.32e-23 | 101 |
MS.gene29528.t1 | MTR_3g014290 | 29.101 | 378 | 234 | 14 | 72 | 433 | 58 | 417 | 1.07e-22 | 100 |
MS.gene29528.t1 | MTR_5g061690 | 26.966 | 445 | 253 | 22 | 28 | 427 | 25 | 442 | 1.70e-22 | 100 |
MS.gene29528.t1 | MTR_7g080230 | 26.554 | 354 | 214 | 13 | 110 | 435 | 28 | 363 | 2.81e-22 | 98.6 |
MS.gene29528.t1 | MTR_7g102750 | 27.441 | 379 | 232 | 18 | 85 | 435 | 80 | 443 | 2.94e-22 | 99.4 |
MS.gene29528.t1 | MTR_2g103340 | 43.200 | 125 | 26 | 2 | 21 | 145 | 34 | 113 | 7.30e-22 | 93.2 |
MS.gene29528.t1 | MTR_2g103340 | 50.633 | 79 | 30 | 3 | 352 | 429 | 89 | 159 | 6.52e-11 | 61.6 |
MS.gene29528.t1 | MTR_5g080330 | 28.883 | 367 | 184 | 16 | 103 | 435 | 2 | 325 | 1.31e-21 | 97.1 |
MS.gene29528.t1 | MTR_8g075090 | 29.819 | 332 | 186 | 17 | 92 | 398 | 118 | 427 | 5.87e-21 | 95.5 |
MS.gene29528.t1 | MTR_5g077850 | 25.526 | 380 | 227 | 15 | 88 | 434 | 83 | 439 | 1.44e-20 | 94.0 |
MS.gene29528.t1 | MTR_4g100990 | 27.206 | 408 | 223 | 17 | 87 | 432 | 75 | 470 | 3.71e-20 | 92.8 |
MS.gene29528.t1 | MTR_7g102750 | 28.846 | 312 | 185 | 15 | 85 | 373 | 80 | 377 | 1.03e-18 | 88.2 |
MS.gene29528.t1 | MTR_3g087780 | 28.037 | 321 | 193 | 12 | 129 | 432 | 9 | 308 | 5.21e-18 | 85.9 |
MS.gene29528.t1 | MTR_3g087780 | 28.349 | 321 | 192 | 13 | 129 | 432 | 45 | 344 | 5.48e-18 | 85.9 |
MS.gene29528.t1 | MTR_8g039540 | 26.444 | 450 | 284 | 18 | 9 | 433 | 7 | 434 | 6.63e-18 | 85.9 |
MS.gene29528.t1 | MTR_5g061690 | 29.412 | 306 | 175 | 17 | 138 | 427 | 23 | 303 | 1.01e-17 | 84.7 |
MS.gene29528.t1 | MTR_8g075010 | 26.146 | 371 | 221 | 16 | 90 | 432 | 104 | 449 | 1.91e-16 | 81.6 |
MS.gene29528.t1 | MTR_3g100500 | 29.315 | 365 | 218 | 16 | 85 | 432 | 96 | 437 | 8.45e-16 | 79.3 |
MS.gene29528.t1 | MTR_5g077920 | 25.253 | 396 | 250 | 14 | 72 | 435 | 48 | 429 | 1.22e-15 | 79.0 |
MS.gene29528.t1 | MTR_2g037710 | 27.315 | 216 | 128 | 9 | 224 | 432 | 12 | 205 | 4.24e-12 | 65.5 |
MS.gene29528.t1 | MTR_1g072380 | 22.807 | 399 | 232 | 15 | 87 | 430 | 57 | 434 | 4.32e-12 | 68.2 |
MS.gene29528.t1 | MTR_1g093100 | 24.870 | 386 | 216 | 19 | 69 | 417 | 38 | 386 | 5.89e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29528.t1 | AT1G64830 | 52.068 | 411 | 191 | 5 | 26 | 434 | 24 | 430 | 6.40e-143 | 415 |
MS.gene29528.t1 | AT5G33340 | 52.555 | 411 | 188 | 6 | 27 | 434 | 30 | 436 | 3.36e-138 | 403 |
MS.gene29528.t1 | AT2G35615 | 46.259 | 441 | 213 | 8 | 14 | 433 | 7 | 444 | 2.54e-117 | 350 |
MS.gene29528.t1 | AT1G31450 | 44.921 | 443 | 220 | 9 | 5 | 433 | 10 | 442 | 4.38e-110 | 332 |
MS.gene29528.t1 | AT2G28010 | 39.906 | 426 | 203 | 11 | 13 | 433 | 15 | 392 | 4.66e-87 | 271 |
MS.gene29528.t1 | AT2G28040 | 40.284 | 422 | 200 | 14 | 16 | 433 | 18 | 391 | 5.20e-84 | 263 |
MS.gene29528.t1 | AT2G28040 | 41.775 | 383 | 197 | 11 | 54 | 433 | 23 | 382 | 7.61e-84 | 262 |
MS.gene29528.t1 | AT2G28030 | 42.149 | 363 | 185 | 7 | 74 | 433 | 48 | 388 | 4.70e-82 | 258 |
MS.gene29528.t1 | AT2G28220 | 37.585 | 439 | 220 | 12 | 3 | 433 | 6 | 398 | 5.16e-81 | 256 |
MS.gene29528.t1 | AT2G28225 | 40.489 | 368 | 188 | 9 | 74 | 433 | 54 | 398 | 6.68e-78 | 248 |
MS.gene29528.t1 | AT2G03200 | 36.574 | 432 | 237 | 13 | 26 | 434 | 43 | 460 | 4.07e-74 | 239 |
MS.gene29528.t1 | AT1G01300 | 38.997 | 359 | 194 | 13 | 85 | 432 | 140 | 484 | 1.24e-58 | 199 |
MS.gene29528.t1 | AT3G61820 | 38.228 | 395 | 208 | 16 | 55 | 432 | 108 | 483 | 8.94e-58 | 197 |
MS.gene29528.t1 | AT4G30030 | 36.066 | 366 | 206 | 14 | 79 | 432 | 70 | 419 | 1.68e-55 | 190 |
MS.gene29528.t1 | AT3G18490 | 35.955 | 356 | 205 | 13 | 85 | 432 | 160 | 500 | 2.35e-54 | 189 |
MS.gene29528.t1 | AT3G20015 | 31.390 | 446 | 247 | 17 | 20 | 432 | 51 | 470 | 6.05e-51 | 179 |
MS.gene29528.t1 | AT2G23945 | 28.540 | 459 | 277 | 16 | 9 | 434 | 10 | 450 | 8.05e-51 | 178 |
MS.gene29528.t1 | AT1G25510 | 35.493 | 355 | 205 | 13 | 85 | 432 | 146 | 483 | 1.49e-49 | 175 |
MS.gene29528.t1 | AT3G25700 | 31.455 | 426 | 245 | 18 | 39 | 432 | 39 | 449 | 3.30e-46 | 166 |
MS.gene29528.t1 | AT5G10760 | 33.985 | 409 | 232 | 15 | 31 | 432 | 87 | 464 | 4.29e-44 | 160 |
MS.gene29528.t1 | AT5G10770 | 34.819 | 359 | 210 | 12 | 85 | 433 | 130 | 474 | 6.96e-44 | 160 |
MS.gene29528.t1 | AT4G30040 | 31.435 | 439 | 250 | 20 | 14 | 427 | 15 | 427 | 3.30e-43 | 157 |
MS.gene29528.t1 | AT1G79720 | 36.074 | 377 | 181 | 19 | 87 | 432 | 135 | 482 | 9.32e-43 | 157 |
MS.gene29528.t1 | AT3G12700 | 30.447 | 358 | 236 | 8 | 87 | 433 | 106 | 461 | 5.64e-41 | 152 |
MS.gene29528.t1 | AT5G36260 | 31.117 | 376 | 219 | 16 | 85 | 435 | 76 | 436 | 6.22e-41 | 152 |
MS.gene29528.t1 | AT2G42980 | 32.990 | 388 | 221 | 15 | 74 | 432 | 147 | 524 | 1.54e-40 | 152 |
MS.gene29528.t1 | AT3G59080 | 32.124 | 386 | 225 | 14 | 74 | 432 | 157 | 532 | 4.53e-40 | 150 |
MS.gene29528.t1 | AT2G39710 | 31.300 | 377 | 203 | 16 | 89 | 427 | 67 | 425 | 1.18e-36 | 139 |
MS.gene29528.t1 | AT3G02740 | 29.365 | 378 | 231 | 14 | 76 | 433 | 79 | 440 | 2.83e-36 | 139 |
MS.gene29528.t1 | AT3G02740 | 29.155 | 367 | 229 | 13 | 87 | 433 | 10 | 365 | 3.87e-36 | 137 |
MS.gene29528.t1 | AT1G65240 | 28.763 | 372 | 226 | 15 | 85 | 433 | 72 | 427 | 4.36e-33 | 130 |
MS.gene29528.t1 | AT3G59080 | 29.659 | 381 | 205 | 13 | 74 | 432 | 157 | 496 | 7.91e-30 | 121 |
MS.gene29528.t1 | AT5G02190 | 26.862 | 376 | 221 | 15 | 96 | 432 | 82 | 442 | 4.67e-29 | 119 |
MS.gene29528.t1 | AT1G09750 | 30.130 | 385 | 225 | 16 | 73 | 432 | 83 | 448 | 6.34e-29 | 118 |
MS.gene29528.t1 | AT1G05840 | 28.382 | 377 | 231 | 13 | 85 | 435 | 78 | 441 | 7.70e-29 | 118 |
MS.gene29528.t1 | AT3G54400 | 29.156 | 391 | 237 | 15 | 62 | 433 | 56 | 425 | 2.11e-28 | 116 |
MS.gene29528.t1 | AT3G50050 | 26.164 | 451 | 280 | 18 | 12 | 434 | 13 | 438 | 1.14e-27 | 116 |
MS.gene29528.t1 | AT5G45120 | 27.952 | 415 | 217 | 20 | 84 | 432 | 80 | 478 | 1.82e-27 | 114 |
MS.gene29528.t1 | AT4G33490 | 26.161 | 409 | 236 | 17 | 63 | 432 | 30 | 411 | 2.62e-27 | 113 |
MS.gene29528.t1 | AT1G66180 | 26.005 | 373 | 235 | 14 | 88 | 435 | 73 | 429 | 4.73e-27 | 112 |
MS.gene29528.t1 | AT1G44130 | 25.750 | 400 | 244 | 15 | 67 | 434 | 23 | 401 | 1.59e-26 | 110 |
MS.gene29528.t1 | AT5G43100 | 26.431 | 367 | 230 | 13 | 85 | 433 | 74 | 418 | 4.41e-26 | 110 |
MS.gene29528.t1 | AT5G43100 | 26.431 | 367 | 230 | 13 | 85 | 433 | 74 | 418 | 9.28e-26 | 110 |
MS.gene29528.t1 | AT2G36670 | 27.273 | 374 | 238 | 14 | 85 | 435 | 98 | 460 | 1.10e-25 | 109 |
MS.gene29528.t1 | AT1G08210 | 28.226 | 372 | 232 | 13 | 85 | 433 | 82 | 441 | 1.14e-25 | 109 |
MS.gene29528.t1 | AT1G08210 | 28.226 | 372 | 232 | 13 | 85 | 433 | 130 | 489 | 1.51e-25 | 109 |
MS.gene29528.t1 | AT1G08210 | 28.226 | 372 | 232 | 13 | 85 | 433 | 116 | 475 | 1.55e-25 | 109 |
MS.gene29528.t1 | AT2G36670 | 27.005 | 374 | 235 | 15 | 87 | 435 | 105 | 465 | 1.99e-25 | 108 |
MS.gene29528.t1 | AT2G36670 | 27.005 | 374 | 235 | 15 | 87 | 435 | 34 | 394 | 2.00e-25 | 108 |
MS.gene29528.t1 | AT2G36670 | 27.005 | 374 | 235 | 15 | 87 | 435 | 34 | 394 | 2.00e-25 | 108 |
MS.gene29528.t1 | AT5G37540 | 26.415 | 371 | 234 | 13 | 88 | 432 | 81 | 438 | 2.33e-25 | 108 |
MS.gene29528.t1 | AT1G49050 | 25.967 | 362 | 222 | 15 | 105 | 434 | 50 | 397 | 3.65e-25 | 107 |
MS.gene29528.t1 | AT1G49050 | 26.478 | 389 | 237 | 18 | 80 | 434 | 197 | 570 | 3.65e-25 | 108 |
MS.gene29528.t1 | AT5G22850 | 29.521 | 376 | 229 | 16 | 85 | 435 | 79 | 443 | 4.36e-25 | 107 |
MS.gene29528.t1 | AT2G17760 | 27.972 | 429 | 248 | 22 | 32 | 432 | 54 | 449 | 8.88e-24 | 103 |
MS.gene29528.t1 | AT4G33490 | 29.934 | 304 | 170 | 13 | 63 | 349 | 27 | 304 | 1.06e-23 | 102 |
MS.gene29528.t1 | AT4G12920 | 26.893 | 383 | 243 | 15 | 61 | 432 | 31 | 387 | 1.35e-23 | 102 |
MS.gene29528.t1 | AT1G77480 | 26.190 | 378 | 230 | 17 | 85 | 434 | 65 | 421 | 2.11e-23 | 102 |
MS.gene29528.t1 | AT1G77480 | 26.190 | 378 | 230 | 17 | 85 | 434 | 65 | 421 | 3.52e-23 | 102 |
MS.gene29528.t1 | AT1G49050 | 27.899 | 276 | 173 | 12 | 80 | 343 | 197 | 458 | 2.67e-21 | 96.3 |
MS.gene29528.t1 | AT3G52500 | 28.283 | 396 | 222 | 18 | 85 | 433 | 88 | 468 | 6.68e-21 | 95.1 |
MS.gene29528.t1 | AT1G08210 | 26.316 | 399 | 232 | 14 | 85 | 433 | 82 | 468 | 1.23e-20 | 94.7 |
MS.gene29528.t1 | AT5G10080 | 24.738 | 477 | 276 | 22 | 11 | 434 | 9 | 455 | 2.42e-20 | 94.0 |
MS.gene29528.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 104 | 445 | 2.97e-20 | 93.6 |
MS.gene29528.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 94 | 435 | 3.21e-20 | 93.2 |
MS.gene29528.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 10 | 351 | 5.17e-20 | 92.0 |
MS.gene29528.t1 | AT5G07030 | 25.800 | 469 | 283 | 18 | 2 | 433 | 15 | 455 | 5.58e-19 | 89.4 |
MS.gene29528.t1 | AT3G51350 | 25.561 | 446 | 269 | 19 | 27 | 432 | 30 | 452 | 8.06e-19 | 89.4 |
MS.gene29528.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 104 | 381 | 2.18e-18 | 87.4 |
MS.gene29528.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 94 | 371 | 2.28e-18 | 87.4 |
MS.gene29528.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 104 | 381 | 2.65e-18 | 87.0 |
MS.gene29528.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 94 | 371 | 2.87e-18 | 86.7 |
MS.gene29528.t1 | AT3G51340 | 25.691 | 362 | 226 | 14 | 92 | 432 | 108 | 447 | 3.90e-17 | 84.0 |
MS.gene29528.t1 | AT4G35880 | 26.158 | 367 | 222 | 16 | 90 | 432 | 110 | 451 | 1.78e-16 | 82.0 |
MS.gene29528.t1 | AT3G51360 | 30.469 | 256 | 146 | 10 | 92 | 334 | 104 | 340 | 2.84e-15 | 77.0 |
MS.gene29528.t1 | AT3G25700 | 27.317 | 205 | 126 | 7 | 39 | 229 | 39 | 234 | 2.99e-15 | 77.0 |
MS.gene29528.t1 | AT3G51340 | 27.018 | 285 | 174 | 11 | 92 | 359 | 108 | 375 | 3.70e-15 | 77.4 |
MS.gene29528.t1 | AT3G51330 | 27.174 | 368 | 220 | 16 | 92 | 432 | 107 | 453 | 3.99e-15 | 77.4 |
MS.gene29528.t1 | AT3G51330 | 27.174 | 368 | 220 | 16 | 92 | 432 | 107 | 453 | 4.71e-15 | 77.4 |
MS.gene29528.t1 | AT3G51340 | 27.113 | 284 | 173 | 11 | 92 | 358 | 108 | 374 | 5.91e-15 | 76.6 |
MS.gene29528.t1 | AT3G51340 | 24.397 | 373 | 229 | 14 | 92 | 432 | 108 | 459 | 1.15e-14 | 76.3 |
MS.gene29528.t1 | AT3G42550 | 36.538 | 104 | 64 | 1 | 87 | 188 | 78 | 181 | 6.35e-14 | 73.6 |
MS.gene29528.t1 | AT4G35880 | 26.246 | 301 | 185 | 13 | 90 | 372 | 110 | 391 | 1.35e-13 | 72.8 |
MS.gene29528.t1 | AT3G51330 | 28.477 | 302 | 179 | 13 | 92 | 373 | 107 | 391 | 4.51e-13 | 71.2 |
Find 95 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGTAGTATGGTGATTT+TGG | 0.132017 | 5.3:-65085891 | None:intergenic |
TCGTGCCAATCATTTCTTTA+AGG | 0.171874 | 5.3:+65085965 | MS.gene29528:CDS |
GCTCGACTTGGTTCCATCTT+TGG | 0.197171 | 5.3:+65086977 | MS.gene29528:CDS |
GGAGATGCCGCTGTGGTTTC+GGG | 0.226097 | 5.3:+65086554 | MS.gene29528:CDS |
TTAAAATGTGCGGTGATTAT+AGG | 0.227453 | 5.3:-65086869 | None:intergenic |
CTCGACTTGGTTCCATCTTT+GGG | 0.248725 | 5.3:+65086978 | MS.gene29528:CDS |
TGGAGATGCCGCTGTGGTTT+CGG | 0.272220 | 5.3:+65086553 | MS.gene29528:CDS |
GGAAACAAAAGAGTAGAATT+TGG | 0.282532 | 5.3:+65086656 | MS.gene29528:CDS |
ATGACATAACCACCCCTATC+AGG | 0.317982 | 5.3:-65086023 | None:intergenic |
TCATTTCCTAAAACAGTGAT+AGG | 0.331434 | 5.3:+65086356 | MS.gene29528:CDS |
TGGTTCCATCTTTGGGAACT+TGG | 0.335588 | 5.3:+65086985 | MS.gene29528:CDS |
TCAGGGATTACAGTTGATTC+AGG | 0.336604 | 5.3:-65086005 | None:intergenic |
CATAGGCCGAATTGTTGATT+AGG | 0.338419 | 5.3:-65086815 | None:intergenic |
GAAATGATTGGCACGATTGA+TGG | 0.352741 | 5.3:-65085958 | None:intergenic |
GCGACAAGTATACTCAGTTT+TGG | 0.364508 | 5.3:+65086533 | MS.gene29528:CDS |
GGTAACATCATAATTGATTC+AGG | 0.364855 | 5.3:+65086704 | MS.gene29528:CDS |
AATCAACTGTAATCCCTGAT+AGG | 0.365381 | 5.3:+65086009 | MS.gene29528:CDS |
TGTCAATATAAAATTAGTTA+TGG | 0.366380 | 5.3:+65086260 | MS.gene29528:CDS |
ACTGATAATGCGGGGACGTT+TGG | 0.369941 | 5.3:+65086386 | MS.gene29528:CDS |
TGGTAAATTCTCTTATTGTT+TGG | 0.378968 | 5.3:+65086484 | MS.gene29528:CDS |
ATACAGGTAGTGACATTGTT+TGG | 0.380232 | 5.3:+65086093 | MS.gene29528:CDS |
GGAATCAGCTGTGGCGGATT+CGG | 0.381615 | 5.3:+65086769 | MS.gene29528:CDS |
ACCCCTCCAACTAAGATATA+CGG | 0.395309 | 5.3:+65086062 | MS.gene29528:CDS |
GGTGTCTCTCATAACACAAT+TGG | 0.397228 | 5.3:+65086448 | MS.gene29528:CDS |
GCAATACCGTATATCTTAGT+TGG | 0.401415 | 5.3:-65086068 | None:intergenic |
TTGAGCCAAGTTCCCAAAGA+TGG | 0.402500 | 5.3:-65086990 | None:intergenic |
CTTGGCTCAACAAAATTTGT+TGG | 0.415034 | 5.3:+65087003 | MS.gene29528:CDS |
CTTCAACACTCGTTACGCTT+TGG | 0.416239 | 5.3:-65087077 | None:intergenic |
GTATAGTTGGCCTTGGAGGC+GGG | 0.418166 | 5.3:+65086423 | MS.gene29528:CDS |
AAAGAAAGAAAGAGTAAGAA+GGG | 0.419999 | 5.3:-65085793 | None:intergenic |
CAAACAATACCCTCAGCAAT+TGG | 0.420182 | 5.3:-65086932 | None:intergenic |
AGGAAATGAAACAGGACTTC+CGG | 0.422734 | 5.3:-65086342 | None:intergenic |
CAACCATCATCTGCTCGACT+TGG | 0.440590 | 5.3:+65086965 | MS.gene29528:CDS |
AAAAGAAAGAAAGAGTAAGA+AGG | 0.440746 | 5.3:-65085794 | None:intergenic |
AGCTCTGGTATAGTTGGCCT+TGG | 0.443123 | 5.3:+65086416 | MS.gene29528:CDS |
GGTATAGTTGGCCTTGGAGG+CGG | 0.452029 | 5.3:+65086422 | MS.gene29528:CDS |
TTCTTTAAGGATTCTGACTC+AGG | 0.452767 | 5.3:+65085978 | MS.gene29528:CDS |
ACGTTTGGAGGCGCAAGCTC+TGG | 0.453545 | 5.3:+65086401 | MS.gene29528:CDS |
GATGATCCTAATCAACAATT+CGG | 0.454884 | 5.3:+65086809 | MS.gene29528:CDS |
GCCGCTGTGGTTTCGGGTGA+CGG | 0.464493 | 5.3:+65086560 | MS.gene29528:CDS |
GCTCAACAAAATTTGTTGGT+TGG | 0.464745 | 5.3:+65087007 | MS.gene29528:CDS |
GATAATGCGGGGACGTTTGG+AGG | 0.471225 | 5.3:+65086389 | MS.gene29528:CDS |
AGAATCCTTAAAGAAATGAT+TGG | 0.474578 | 5.3:-65085970 | None:intergenic |
AAAAGAAGCAATGAAACAAA+GGG | 0.475787 | 5.3:-65085817 | None:intergenic |
CTTGCATTGGAGTCCACCTC+CGG | 0.477636 | 5.3:+65086323 | MS.gene29528:CDS |
TCTGGTATAGTTGGCCTTGG+AGG | 0.477995 | 5.3:+65086419 | MS.gene29528:CDS |
AGTTGGCCTTGGAGGCGGGC+CGG | 0.481112 | 5.3:+65086427 | MS.gene29528:CDS |
ACATTAGAAGCATTTAGTGT+TGG | 0.483347 | 5.3:+65086635 | MS.gene29528:CDS |
ACCTTTGTTCCAATTGCTGA+GGG | 0.486978 | 5.3:+65086923 | MS.gene29528:CDS |
ATCCGACGTCTATACTAACT+TGG | 0.497477 | 5.3:+65086748 | MS.gene29528:CDS |
TAGTGTTGACACTCTTGCAT+TGG | 0.507261 | 5.3:+65086310 | MS.gene29528:CDS |
CCTAAAACAGTGATAGGATG+TGG | 0.509378 | 5.3:+65086362 | MS.gene29528:CDS |
ATCAACTGTAATCCCTGATA+GGG | 0.516703 | 5.3:+65086010 | MS.gene29528:CDS |
TCTTCAGAAGGTGGTGATGA+AGG | 0.518387 | 5.3:+65086683 | MS.gene29528:CDS |
GGCGCAAGCTCTGGTATAGT+TGG | 0.524413 | 5.3:+65086410 | MS.gene29528:CDS |
GTGTCTCTCATAACACAATT+GGG | 0.525876 | 5.3:+65086449 | MS.gene29528:CDS |
GAGACACCGGCCCGCCTCCA+AGG | 0.526730 | 5.3:-65086433 | None:intergenic |
ATATACGGTATTGCTGATAC+AGG | 0.526965 | 5.3:+65086077 | MS.gene29528:CDS |
ACACAATTGGGATCATCAAT+CGG | 0.530301 | 5.3:+65086461 | MS.gene29528:CDS |
GAATTTGGAGGTTCTTCAGA+AGG | 0.530310 | 5.3:+65086671 | MS.gene29528:CDS |
TACCTTTGTTCCAATTGCTG+AGG | 0.535011 | 5.3:+65086922 | MS.gene29528:CDS |
GGATGTGGAACTGATAATGC+GGG | 0.535589 | 5.3:+65086377 | MS.gene29528:CDS |
TACCGTATATCTTAGTTGGA+GGG | 0.552333 | 5.3:-65086064 | None:intergenic |
TGAAACAGGACTTCCGGAGG+TGG | 0.556306 | 5.3:-65086336 | None:intergenic |
AACAAAAGAGTAGAATTTGG+AGG | 0.557300 | 5.3:+65086659 | MS.gene29528:CDS |
GAACCAAGTCGAGCAGATGA+TGG | 0.559364 | 5.3:-65086968 | None:intergenic |
CAAGTCGAGCAGATGATGGT+TGG | 0.560415 | 5.3:-65086964 | None:intergenic |
TTTGACTCCTTGTTCAACAA+TGG | 0.563922 | 5.3:-65086509 | None:intergenic |
ATACCGTATATCTTAGTTGG+AGG | 0.568782 | 5.3:-65086065 | None:intergenic |
ACCGTATATCTTAGTTGGAG+GGG | 0.570548 | 5.3:-65086063 | None:intergenic |
TGACATAACCACCCCTATCA+GGG | 0.581426 | 5.3:-65086022 | None:intergenic |
TTTGGAGGTTCTTCAGAAGG+TGG | 0.586890 | 5.3:+65086674 | MS.gene29528:CDS |
TGGTTGTAACATTGTTCACA+AGG | 0.591014 | 5.3:-65086128 | None:intergenic |
TACGCTTTGGTACAATCAGT+AGG | 0.595820 | 5.3:-65087064 | None:intergenic |
ACCCTCAGCAATTGGAACAA+AGG | 0.601197 | 5.3:-65086924 | None:intergenic |
AAGTTAGTATAGACGTCGGA+TGG | 0.605014 | 5.3:-65086746 | None:intergenic |
TTGATGTCAAACTATAGCAT+AGG | 0.608908 | 5.3:-65086832 | None:intergenic |
TACTAACTTGGAATCAGCTG+TGG | 0.614064 | 5.3:+65086760 | MS.gene29528:CDS |
TAACTTGGAATCAGCTGTGG+CGG | 0.614924 | 5.3:+65086763 | MS.gene29528:CDS |
TATGTCATGACGTATTCAGT+TGG | 0.616181 | 5.3:+65086038 | MS.gene29528:CDS |
ATCGGCACCTTTAAAATGTG+CGG | 0.635428 | 5.3:-65086879 | None:intergenic |
TTTGGTGCCATTGTTGAACA+AGG | 0.640174 | 5.3:+65086502 | MS.gene29528:CDS |
AATAGAATGCAACTCAACAT+CGG | 0.645414 | 5.3:-65086897 | None:intergenic |
AATTGTGTTATGAGAGACAC+CGG | 0.647126 | 5.3:-65086446 | None:intergenic |
GTGCTGCATCGACAAAGTGT+TGG | 0.649567 | 5.3:-65085929 | None:intergenic |
TCAACTGTAATCCCTGATAG+GGG | 0.660378 | 5.3:+65086011 | MS.gene29528:CDS |
TGACATAGCTTAGACGCACA+AGG | 0.661062 | 5.3:-65086200 | None:intergenic |
ACTGTAATCCCTGATAGGGG+TGG | 0.665786 | 5.3:+65086014 | MS.gene29528:CDS |
AGGATGTGGAACTGATAATG+CGG | 0.682839 | 5.3:+65086376 | MS.gene29528:CDS |
GGAGATTCTTCACATTCACG+AGG | 0.685076 | 5.3:+65086281 | MS.gene29528:CDS |
CAATTGGGATCATCAATCGG+TGG | 0.692906 | 5.3:+65086464 | MS.gene29528:CDS |
TTCCAAGTTAGTATAGACGT+CGG | 0.706462 | 5.3:-65086750 | None:intergenic |
AAATGAAACAGGACTTCCGG+AGG | 0.727776 | 5.3:-65086339 | None:intergenic |
GATGTGGAACTGATAATGCG+GGG | 0.729209 | 5.3:+65086378 | MS.gene29528:CDS |
ACCGTCACCCGAAACCACAG+CGG | 0.745897 | 5.3:-65086561 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTCAATATAAAATTAGTTA+TGG | + | chr5.3:65086260-65086279 | MS.gene29528:CDS | 15.0% |
!!! | TTTTATATTGACAAGAATTT+TGG | - | chr5.3:65086253-65086272 | None:intergenic | 15.0% |
!!! | AAAGTGTTGGTATTTATTTT+CGG | - | chr5.3:65085919-65085938 | None:intergenic | 20.0% |
!!! | GATTTTGATGGATTAAAAAT+GGG | - | chr5.3:65086161-65086180 | None:intergenic | 20.0% |
!!! | TGATTTTGATGGATTAAAAA+TGG | - | chr5.3:65086162-65086181 | None:intergenic | 20.0% |
! | AAAAAGAAGCAATGAAACAA+AGG | - | chr5.3:65085821-65085840 | None:intergenic | 25.0% |
! | AAAAGAAAGAAAGAGTAAGA+AGG | - | chr5.3:65085797-65085816 | None:intergenic | 25.0% |
! | AAAAGAAGCAATGAAACAAA+GGG | - | chr5.3:65085820-65085839 | None:intergenic | 25.0% |
! | AAAGAAAGAAAGAGTAAGAA+GGG | - | chr5.3:65085796-65085815 | None:intergenic | 25.0% |
! | AATGTCAAAAAGTAGAAAAC+TGG | - | chr5.3:65086620-65086639 | None:intergenic | 25.0% |
! | AGAATCCTTAAAGAAATGAT+TGG | - | chr5.3:65085973-65085992 | None:intergenic | 25.0% |
! | TGGTAAATTCTCTTATTGTT+TGG | + | chr5.3:65086484-65086503 | MS.gene29528:CDS | 25.0% |
!! | TTGTAACTAGATGATTTTGA+TGG | - | chr5.3:65086173-65086192 | None:intergenic | 25.0% |
AACAAAAGAGTAGAATTTGG+AGG | + | chr5.3:65086659-65086678 | MS.gene29528:CDS | 30.0% | |
AATAGAATGCAACTCAACAT+CGG | - | chr5.3:65086900-65086919 | None:intergenic | 30.0% | |
GATGATCCTAATCAACAATT+CGG | + | chr5.3:65086809-65086828 | MS.gene29528:CDS | 30.0% | |
GGAAACAAAAGAGTAGAATT+TGG | + | chr5.3:65086656-65086675 | MS.gene29528:CDS | 30.0% | |
TCATTTCCTAAAACAGTGAT+AGG | + | chr5.3:65086356-65086375 | MS.gene29528:CDS | 30.0% | |
TTAAAATGTGCGGTGATTAT+AGG | - | chr5.3:65086872-65086891 | None:intergenic | 30.0% | |
TTGATGTCAAACTATAGCAT+AGG | - | chr5.3:65086835-65086854 | None:intergenic | 30.0% | |
! | ATAATCACCGCACATTTTAA+AGG | + | chr5.3:65086872-65086891 | MS.gene29528:CDS | 30.0% |
! | GGTAACATCATAATTGATTC+AGG | + | chr5.3:65086704-65086723 | MS.gene29528:CDS | 30.0% |
! | GTTTGTAGTATGGTGATTTT+GGG | - | chr5.3:65085893-65085912 | None:intergenic | 30.0% |
! | TTTGTAGTATGGTGATTTTG+GGG | - | chr5.3:65085892-65085911 | None:intergenic | 30.0% |
!! | ACATTAGAAGCATTTAGTGT+TGG | + | chr5.3:65086635-65086654 | MS.gene29528:CDS | 30.0% |
!! | TGTTGGTATTTATTTTCGGT+AGG | - | chr5.3:65085915-65085934 | None:intergenic | 30.0% |
!!! | ACTGTTTTAGGAAATGAAAC+AGG | - | chr5.3:65086353-65086372 | None:intergenic | 30.0% |
AATCAACTGTAATCCCTGAT+AGG | + | chr5.3:65086009-65086028 | MS.gene29528:CDS | 35.0% | |
AATTGTGTTATGAGAGACAC+CGG | - | chr5.3:65086449-65086468 | None:intergenic | 35.0% | |
ACACAATTGGGATCATCAAT+CGG | + | chr5.3:65086461-65086480 | MS.gene29528:CDS | 35.0% | |
ATACAGGTAGTGACATTGTT+TGG | + | chr5.3:65086093-65086112 | MS.gene29528:CDS | 35.0% | |
ATACCGTATATCTTAGTTGG+AGG | - | chr5.3:65086068-65086087 | None:intergenic | 35.0% | |
ATATACGGTATTGCTGATAC+AGG | + | chr5.3:65086077-65086096 | MS.gene29528:CDS | 35.0% | |
ATCAACTGTAATCCCTGATA+GGG | + | chr5.3:65086010-65086029 | MS.gene29528:CDS | 35.0% | |
CTTGGCTCAACAAAATTTGT+TGG | + | chr5.3:65087003-65087022 | MS.gene29528:CDS | 35.0% | |
GATTAAAAATGGGAGTGGTT+TGG | - | chr5.3:65086151-65086170 | None:intergenic | 35.0% | |
GCAATACCGTATATCTTAGT+TGG | - | chr5.3:65086071-65086090 | None:intergenic | 35.0% | |
GTGTCTCTCATAACACAATT+GGG | + | chr5.3:65086449-65086468 | MS.gene29528:CDS | 35.0% | |
TACCGTATATCTTAGTTGGA+GGG | - | chr5.3:65086067-65086086 | None:intergenic | 35.0% | |
TATGTCATGACGTATTCAGT+TGG | + | chr5.3:65086038-65086057 | MS.gene29528:CDS | 35.0% | |
TCGTGCCAATCATTTCTTTA+AGG | + | chr5.3:65085965-65085984 | MS.gene29528:CDS | 35.0% | |
TGGTTGTAACATTGTTCACA+AGG | - | chr5.3:65086131-65086150 | None:intergenic | 35.0% | |
TTCCAAGTTAGTATAGACGT+CGG | - | chr5.3:65086753-65086772 | None:intergenic | 35.0% | |
TTTGACTCCTTGTTCAACAA+TGG | - | chr5.3:65086512-65086531 | None:intergenic | 35.0% | |
! | GGTTTGTAGTATGGTGATTT+TGG | - | chr5.3:65085894-65085913 | None:intergenic | 35.0% |
! | TTCTTTAAGGATTCTGACTC+AGG | + | chr5.3:65085978-65085997 | MS.gene29528:CDS | 35.0% |
! | TTTTCGGTAGGTTTGTAGTA+TGG | - | chr5.3:65085903-65085922 | None:intergenic | 35.0% |
!! | GCTCAACAAAATTTGTTGGT+TGG | + | chr5.3:65087007-65087026 | MS.gene29528:CDS | 35.0% |
!! | TGATGGATTAAAAATGGGAG+TGG | - | chr5.3:65086156-65086175 | None:intergenic | 35.0% |
!! | TTTTCTCATGCTCTAAGCAA+TGG | + | chr5.3:65085837-65085856 | MS.gene29528:CDS | 35.0% |
!!! | GGAGAGTCTTTTTTTACTAG+AGG | - | chr5.3:65086599-65086618 | None:intergenic | 35.0% |
AAGTTAGTATAGACGTCGGA+TGG | - | chr5.3:65086749-65086768 | None:intergenic | 40.0% | |
ACCCCTCCAACTAAGATATA+CGG | + | chr5.3:65086062-65086081 | MS.gene29528:CDS | 40.0% | |
ACCGTATATCTTAGTTGGAG+GGG | - | chr5.3:65086066-65086085 | None:intergenic | 40.0% | |
ACCTTTGTTCCAATTGCTGA+GGG | + | chr5.3:65086923-65086942 | MS.gene29528:CDS | 40.0% | |
AGGAAATGAAACAGGACTTC+CGG | - | chr5.3:65086345-65086364 | None:intergenic | 40.0% | |
ATCCGACGTCTATACTAACT+TGG | + | chr5.3:65086748-65086767 | MS.gene29528:CDS | 40.0% | |
CAAACAATACCCTCAGCAAT+TGG | - | chr5.3:65086935-65086954 | None:intergenic | 40.0% | |
CCTAAAACAGTGATAGGATG+TGG | + | chr5.3:65086362-65086381 | MS.gene29528:CDS | 40.0% | |
GAAATGATTGGCACGATTGA+TGG | - | chr5.3:65085961-65085980 | None:intergenic | 40.0% | |
GAATTTGGAGGTTCTTCAGA+AGG | + | chr5.3:65086671-65086690 | MS.gene29528:CDS | 40.0% | |
GGTGTCTCTCATAACACAAT+TGG | + | chr5.3:65086448-65086467 | MS.gene29528:CDS | 40.0% | |
TACCTTTGTTCCAATTGCTG+AGG | + | chr5.3:65086922-65086941 | MS.gene29528:CDS | 40.0% | |
TACGCTTTGGTACAATCAGT+AGG | - | chr5.3:65087067-65087086 | None:intergenic | 40.0% | |
TACTAACTTGGAATCAGCTG+TGG | + | chr5.3:65086760-65086779 | MS.gene29528:CDS | 40.0% | |
TCAACTGTAATCCCTGATAG+GGG | + | chr5.3:65086011-65086030 | MS.gene29528:CDS | 40.0% | |
! | AGGATGTGGAACTGATAATG+CGG | + | chr5.3:65086376-65086395 | MS.gene29528:CDS | 40.0% |
! | CATAGGCCGAATTGTTGATT+AGG | - | chr5.3:65086818-65086837 | None:intergenic | 40.0% |
! | CCACATCCTATCACTGTTTT+AGG | - | chr5.3:65086365-65086384 | None:intergenic | 40.0% |
! | GCGACAAGTATACTCAGTTT+TGG | + | chr5.3:65086533-65086552 | MS.gene29528:CDS | 40.0% |
! | TCAGGGATTACAGTTGATTC+AGG | - | chr5.3:65086008-65086027 | None:intergenic | 40.0% |
!! | AGAATTTTGGTCACTGCAAG+AGG | - | chr5.3:65086240-65086259 | None:intergenic | 40.0% |
!! | ATCGGCACCTTTAAAATGTG+CGG | - | chr5.3:65086882-65086901 | None:intergenic | 40.0% |
!! | TAGTGTTGACACTCTTGCAT+TGG | + | chr5.3:65086310-65086329 | MS.gene29528:CDS | 40.0% |
!! | TTTGGTGCCATTGTTGAACA+AGG | + | chr5.3:65086502-65086521 | MS.gene29528:CDS | 40.0% |
AAATGAAACAGGACTTCCGG+AGG | - | chr5.3:65086342-65086361 | None:intergenic | 45.0% | |
ACCCTCAGCAATTGGAACAA+AGG | - | chr5.3:65086927-65086946 | None:intergenic | 45.0% | |
ATGACATAACCACCCCTATC+AGG | - | chr5.3:65086026-65086045 | None:intergenic | 45.0% | |
CAATTGGGATCATCAATCGG+TGG | + | chr5.3:65086464-65086483 | MS.gene29528:CDS | 45.0% | |
GGAGATTCTTCACATTCACG+AGG | + | chr5.3:65086281-65086300 | MS.gene29528:CDS | 45.0% | |
TAACTTGGAATCAGCTGTGG+CGG | + | chr5.3:65086763-65086782 | MS.gene29528:CDS | 45.0% | |
TGACATAACCACCCCTATCA+GGG | - | chr5.3:65086025-65086044 | None:intergenic | 45.0% | |
TGACATAGCTTAGACGCACA+AGG | - | chr5.3:65086203-65086222 | None:intergenic | 45.0% | |
TTGAGCCAAGTTCCCAAAGA+TGG | - | chr5.3:65086993-65087012 | None:intergenic | 45.0% | |
TTTGGAGGTTCTTCAGAAGG+TGG | + | chr5.3:65086674-65086693 | MS.gene29528:CDS | 45.0% | |
! | GATGTGGAACTGATAATGCG+GGG | + | chr5.3:65086378-65086397 | MS.gene29528:CDS | 45.0% |
! | GGATGTGGAACTGATAATGC+GGG | + | chr5.3:65086377-65086396 | MS.gene29528:CDS | 45.0% |
! | TCTTCAGAAGGTGGTGATGA+AGG | + | chr5.3:65086683-65086702 | MS.gene29528:CDS | 45.0% |
! | TGGTTCCATCTTTGGGAACT+TGG | + | chr5.3:65086985-65087004 | MS.gene29528:CDS | 45.0% |
!! | ATGGTGATTTTGGGGAGTCA+CGG | - | chr5.3:65085884-65085903 | None:intergenic | 45.0% |
!! | CTCGACTTGGTTCCATCTTT+GGG | + | chr5.3:65086978-65086997 | MS.gene29528:CDS | 45.0% |
ACTGTAATCCCTGATAGGGG+TGG | + | chr5.3:65086014-65086033 | MS.gene29528:CDS | 50.0% | |
CAACCATCATCTGCTCGACT+TGG | + | chr5.3:65086965-65086984 | MS.gene29528:CDS | 50.0% | |
GAACCAAGTCGAGCAGATGA+TGG | - | chr5.3:65086971-65086990 | None:intergenic | 50.0% | |
! | ACTGATAATGCGGGGACGTT+TGG | + | chr5.3:65086386-65086405 | MS.gene29528:CDS | 50.0% |
! | AGCTCTGGTATAGTTGGCCT+TGG | + | chr5.3:65086416-65086435 | MS.gene29528:CDS | 50.0% |
! | CAAGTCGAGCAGATGATGGT+TGG | - | chr5.3:65086967-65086986 | None:intergenic | 50.0% |
! | GTGCTGCATCGACAAAGTGT+TGG | - | chr5.3:65085932-65085951 | None:intergenic | 50.0% |
!! | GCTCGACTTGGTTCCATCTT+TGG | + | chr5.3:65086977-65086996 | MS.gene29528:CDS | 50.0% |
!! | TCTGGTATAGTTGGCCTTGG+AGG | + | chr5.3:65086419-65086438 | MS.gene29528:CDS | 50.0% |
CTTGCATTGGAGTCCACCTC+CGG | + | chr5.3:65086323-65086342 | MS.gene29528:CDS | 55.0% | |
GATAATGCGGGGACGTTTGG+AGG | + | chr5.3:65086389-65086408 | MS.gene29528:CDS | 55.0% | |
TGAAACAGGACTTCCGGAGG+TGG | - | chr5.3:65086339-65086358 | None:intergenic | 55.0% | |
TGGAGATGCCGCTGTGGTTT+CGG | + | chr5.3:65086553-65086572 | MS.gene29528:CDS | 55.0% | |
! | GGCGCAAGCTCTGGTATAGT+TGG | + | chr5.3:65086410-65086429 | MS.gene29528:CDS | 55.0% |
!! | GGAATCAGCTGTGGCGGATT+CGG | + | chr5.3:65086769-65086788 | MS.gene29528:CDS | 55.0% |
!! | GGTATAGTTGGCCTTGGAGG+CGG | + | chr5.3:65086422-65086441 | MS.gene29528:CDS | 55.0% |
!! | GTATAGTTGGCCTTGGAGGC+GGG | + | chr5.3:65086423-65086442 | MS.gene29528:CDS | 55.0% |
!! | GTGATTTTGGGGAGTCACGG+TGG | - | chr5.3:65085881-65085900 | None:intergenic | 55.0% |
!!! | CAGTTTTGGAGATGCCGCTG+TGG | + | chr5.3:65086547-65086566 | MS.gene29528:CDS | 55.0% |
ACCGTCACCCGAAACCACAG+CGG | - | chr5.3:65086564-65086583 | None:intergenic | 60.0% | |
GGAGATGCCGCTGTGGTTTC+GGG | + | chr5.3:65086554-65086573 | MS.gene29528:CDS | 60.0% | |
! | ACGTTTGGAGGCGCAAGCTC+TGG | + | chr5.3:65086401-65086420 | MS.gene29528:CDS | 60.0% |
! | GCCGCTGTGGTTTCGGGTGA+CGG | + | chr5.3:65086560-65086579 | MS.gene29528:CDS | 65.0% |
!! | AGTTGGCCTTGGAGGCGGGC+CGG | + | chr5.3:65086427-65086446 | MS.gene29528:CDS | 70.0% |
GAGACACCGGCCCGCCTCCA+AGG | - | chr5.3:65086436-65086455 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 65085780 | 65087087 | 65085780 | ID=MS.gene29528 |
chr5.3 | mRNA | 65085780 | 65087087 | 65085780 | ID=MS.gene29528.t1;Parent=MS.gene29528 |
chr5.3 | exon | 65085780 | 65087087 | 65085780 | ID=MS.gene29528.t1.exon1;Parent=MS.gene29528.t1 |
chr5.3 | CDS | 65085780 | 65087087 | 65085780 | ID=cds.MS.gene29528.t1;Parent=MS.gene29528.t1 |
Gene Sequence |
Protein sequence |