Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29554.t1 | XP_003616513.1 | 96.1 | 543 | 21 | 0 | 1 | 543 | 1 | 543 | 8.20E-303 | 1048.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29554.t1 | F4K2A1 | 61.9 | 527 | 179 | 3 | 18 | 543 | 66 | 571 | 2.3e-181 | 636.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29554.t1 | G7K218 | 96.1 | 543 | 21 | 0 | 1 | 543 | 1 | 543 | 5.9e-303 | 1048.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053565 | MS.gene29554 | 0.802174 | 6.36E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene29554 | 0.800752 | 1.24E-48 | -1.69E-46 |
| MS.gene060480 | MS.gene29554 | 0.83377 | 4.41E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29554.t1 | MTR_5g081250 | 96.133 | 543 | 21 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1087 |
| MS.gene29554.t1 | MTR_5g081250 | 96.000 | 525 | 21 | 0 | 1 | 525 | 1 | 525 | 0.0 | 1053 |
| MS.gene29554.t1 | MTR_3g069160 | 77.122 | 542 | 113 | 6 | 3 | 543 | 2 | 533 | 0.0 | 832 |
| MS.gene29554.t1 | MTR_3g069180 | 76.852 | 540 | 114 | 6 | 3 | 541 | 52 | 581 | 0.0 | 826 |
| MS.gene29554.t1 | MTR_3g069160 | 74.776 | 559 | 113 | 7 | 3 | 543 | 52 | 600 | 0.0 | 822 |
| MS.gene29554.t1 | MTR_3g069160 | 75.743 | 404 | 90 | 5 | 141 | 543 | 1 | 397 | 0.0 | 595 |
| MS.gene29554.t1 | MTR_1g051385 | 49.736 | 569 | 250 | 8 | 7 | 543 | 56 | 620 | 0.0 | 543 |
| MS.gene29554.t1 | MTR_1g051385 | 50.763 | 524 | 222 | 8 | 52 | 543 | 4 | 523 | 4.75e-178 | 512 |
| MS.gene29554.t1 | MTR_1g028510 | 31.579 | 361 | 187 | 13 | 38 | 355 | 60 | 403 | 1.33e-34 | 137 |
| MS.gene29554.t1 | MTR_1g028510 | 31.686 | 344 | 175 | 13 | 38 | 338 | 60 | 386 | 3.94e-32 | 127 |
| MS.gene29554.t1 | MTR_7g100940 | 30.070 | 286 | 144 | 10 | 85 | 332 | 103 | 370 | 6.41e-20 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29554.t1 | AT5G05980 | 61.765 | 544 | 176 | 4 | 1 | 543 | 1 | 513 | 0.0 | 675 |
| MS.gene29554.t1 | AT5G05980 | 61.765 | 544 | 176 | 4 | 1 | 543 | 59 | 571 | 0.0 | 675 |
| MS.gene29554.t1 | AT3G55630 | 59.506 | 526 | 166 | 8 | 19 | 543 | 13 | 492 | 0.0 | 608 |
| MS.gene29554.t1 | AT3G55630 | 59.316 | 526 | 166 | 9 | 19 | 543 | 13 | 491 | 0.0 | 602 |
| MS.gene29554.t1 | AT3G10160 | 52.007 | 573 | 230 | 10 | 1 | 543 | 68 | 625 | 0.0 | 568 |
| MS.gene29554.t1 | AT3G55630 | 60.707 | 481 | 142 | 8 | 64 | 543 | 1 | 435 | 0.0 | 566 |
| MS.gene29554.t1 | AT3G55630 | 60.707 | 481 | 142 | 8 | 64 | 543 | 1 | 435 | 0.0 | 566 |
| MS.gene29554.t1 | AT3G55630 | 60.707 | 481 | 142 | 8 | 64 | 543 | 1 | 435 | 0.0 | 566 |
| MS.gene29554.t1 | AT3G55630 | 56.274 | 526 | 161 | 9 | 19 | 543 | 13 | 470 | 0.0 | 559 |
| MS.gene29554.t1 | AT3G55630 | 57.426 | 404 | 125 | 8 | 141 | 543 | 1 | 358 | 4.81e-150 | 434 |
| MS.gene29554.t1 | AT5G41480 | 37.433 | 187 | 115 | 1 | 35 | 219 | 65 | 251 | 1.87e-32 | 131 |
Find 111 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGAAAGATTTCGTTTAAA+TGG | 0.150675 | 5.2:+69192134 | MS.gene29554:CDS |
| ACTACATCATGTGAGGATTT+AGG | 0.190470 | 5.2:-69194187 | None:intergenic |
| TTACCAGAACAGTTCATAAA+AGG | 0.203175 | 5.2:+69193965 | MS.gene29554:CDS |
| TGTTAAACCGTTTAGCAATT+TGG | 0.215897 | 5.2:-69193744 | None:intergenic |
| TGTTCTCTTTCAGTATTTAA+AGG | 0.221982 | 5.2:+69191157 | MS.gene29554:CDS |
| TGAAAAGGCTGGTATCTTTA+AGG | 0.233695 | 5.2:+69193320 | MS.gene29554:CDS |
| CGTGCTGATGGTACCAATTT+TGG | 0.235335 | 5.2:+69191122 | MS.gene29554:CDS |
| ATCAAACTGATCACCAAAAT+TGG | 0.258776 | 5.2:-69191135 | None:intergenic |
| GCACATACTTCCATACTTTC+AGG | 0.260451 | 5.2:-69194094 | None:intergenic |
| TGTGCTCTACATGGCTAAAA+AGG | 0.276992 | 5.2:+69193819 | MS.gene29554:CDS |
| TTCTTATGAAGAAGCATTAG+AGG | 0.278303 | 5.2:+69191070 | MS.gene29554:CDS |
| GTCTGGACTGTTATCTTTGA+TGG | 0.299173 | 5.2:-69194134 | None:intergenic |
| ATGCATCAGGTCCTTGTAAC+TGG | 0.317684 | 5.2:+69196007 | MS.gene29554:intron |
| TGAAGAACTAAAAGATGATA+TGG | 0.326689 | 5.2:+69195043 | MS.gene29554:CDS |
| GGCACTGTGTTCACAATTAC+TGG | 0.328917 | 5.2:-69195075 | None:intergenic |
| ATTGAGAAGCCTTCTCTTCA+AGG | 0.332856 | 5.2:-69193521 | None:intergenic |
| TAAGATGAGGAGATGTAAAA+AGG | 0.337970 | 5.2:-69192103 | None:intergenic |
| AGGACGTGCATTGCTTCTTC+AGG | 0.340350 | 5.2:-69193501 | None:intergenic |
| CATTTAAACGAAATCTTTCT+CGG | 0.354431 | 5.2:-69192133 | None:intergenic |
| AGCTCATAGTCCTGAAAGTA+TGG | 0.358064 | 5.2:+69194084 | MS.gene29554:CDS |
| ATAAGAAATTACCTTTCCTT+TGG | 0.378621 | 5.2:-69191621 | None:intergenic |
| TATGACCACATGGAGATTCT+TGG | 0.382849 | 5.2:+69193117 | MS.gene29554:CDS |
| GCTATCATGGAGGTCGGATT+AGG | 0.388970 | 5.2:+69192886 | MS.gene29554:CDS |
| CAGTAGCAATCAAATGGCTT+AGG | 0.403053 | 5.2:+69195114 | MS.gene29554:CDS |
| ACTGGTTCTTTACATCTTGT+TGG | 0.408383 | 5.2:+69196025 | MS.gene29554:CDS |
| GAGAAAGATTTCGTTTAAAT+GGG | 0.410613 | 5.2:+69192135 | MS.gene29554:CDS |
| CAAGATATTTGCAGCTGAGC+AGG | 0.417930 | 5.2:+69192753 | MS.gene29554:CDS |
| CTCAGCTGCAAATATCTTGA+AGG | 0.419683 | 5.2:-69192749 | None:intergenic |
| GCGAGGAAACGGAAATAGTT+AGG | 0.426479 | 5.2:-69192718 | None:intergenic |
| TGCATTGCTTCTTCAGGTTG+TGG | 0.427606 | 5.2:-69193495 | None:intergenic |
| AATACTCTTGGGGAAATTGC+TGG | 0.428430 | 5.2:+69193297 | MS.gene29554:CDS |
| AATTAATAGGAAATACTCTT+GGG | 0.430603 | 5.2:+69193286 | MS.gene29554:intron |
| CTAAGCCATTTGATTGCTAC+TGG | 0.434687 | 5.2:-69195113 | None:intergenic |
| GAAGTTATTCCACACACAAT+AGG | 0.440056 | 5.2:-69193087 | None:intergenic |
| GCATCTTGGTGACACATACT+TGG | 0.443840 | 5.2:+69193847 | MS.gene29554:CDS |
| TTTATAGATGCTAGATTTGG+AGG | 0.444699 | 5.2:+69191559 | MS.gene29554:intron |
| CGCAACTGCGGTTTCCGTAC+CGG | 0.449088 | 5.2:+69192080 | MS.gene29554:CDS |
| GGGAATAACAATACCTTGTC+CGG | 0.451515 | 5.2:-69190890 | None:intergenic |
| TTATCTGTGTATAACAAAGT+TGG | 0.456423 | 5.2:+69194752 | MS.gene29554:CDS |
| TTGCTAAACGGTTTAACACT+TGG | 0.457383 | 5.2:+69193749 | MS.gene29554:CDS |
| CAATTAATAGGAAATACTCT+TGG | 0.459087 | 5.2:+69193285 | MS.gene29554:intron |
| GAAGTCAACGATGATGATTT+CGG | 0.471492 | 5.2:-69191050 | None:intergenic |
| TACCAGAACAGTTCATAAAA+GGG | 0.478192 | 5.2:+69193966 | MS.gene29554:CDS |
| TTAGATGCCAAATTGCTAAA+CGG | 0.489073 | 5.2:+69193737 | MS.gene29554:CDS |
| CGATGAAACAGTGTTTGGTC+TGG | 0.493228 | 5.2:-69194151 | None:intergenic |
| TTAACAAGTGCAAGTTTACA+AGG | 0.493638 | 5.2:+69193989 | MS.gene29554:CDS |
| AAGATGCAACATGGAGAAAG+AGG | 0.494396 | 5.2:+69194211 | MS.gene29554:CDS |
| GCTGCTTCTTCCTCGCCTGA+TGG | 0.497273 | 5.2:+69194440 | MS.gene29554:CDS |
| AAACGGAAATAGTTAGGCAT+TGG | 0.498618 | 5.2:-69192712 | None:intergenic |
| TGGGGAAATTGCTGGTGAAA+AGG | 0.504195 | 5.2:+69193305 | MS.gene29554:CDS |
| GAGCATCAATATTTAAATGC+TGG | 0.504381 | 5.2:+69193782 | MS.gene29554:CDS |
| CATTGCCAGTAGCAATCAAA+TGG | 0.511703 | 5.2:+69195108 | MS.gene29554:CDS |
| CCATTGCACTGTGCTCTACA+TGG | 0.513708 | 5.2:+69193810 | MS.gene29554:CDS |
| GTTGTCGATGAAACAGTGTT+TGG | 0.514205 | 5.2:-69194156 | None:intergenic |
| GTGTGTGGAATAACTTCCCT+AGG | 0.517828 | 5.2:+69193093 | MS.gene29554:CDS |
| GCAGGTAGATGTTGCTATCA+TGG | 0.521333 | 5.2:+69192873 | MS.gene29554:intron |
| GATCAGCACATGTTTCCATC+AGG | 0.522006 | 5.2:-69194455 | None:intergenic |
| CAAGTGCAAGTTTACAAGGA+AGG | 0.528131 | 5.2:+69193993 | MS.gene29554:CDS |
| AGGCAAGTAAAGCGAGGAAA+CGG | 0.532150 | 5.2:-69192729 | None:intergenic |
| AAGTGCAAGTTTACAAGGAA+GGG | 0.535241 | 5.2:+69193994 | MS.gene29554:CDS |
| ATCCATGTGGCTGGTACCAA+AGG | 0.535709 | 5.2:+69191605 | MS.gene29554:CDS |
| ATGAAGATTATCCATGTGGC+TGG | 0.538501 | 5.2:+69191596 | MS.gene29554:CDS |
| CGACAGATCAACTTGAGAAT+CGG | 0.540349 | 5.2:-69194798 | None:intergenic |
| TCTCCATGTGGTCATACCCT+AGG | 0.541604 | 5.2:-69193110 | None:intergenic |
| AACAATACCTTGTCCGGACA+TGG | 0.542284 | 5.2:-69190884 | None:intergenic |
| TTGTTATACACAGATAAACT+TGG | 0.543131 | 5.2:-69194746 | None:intergenic |
| CAAACCTCAAAAGCCATGTC+CGG | 0.544746 | 5.2:+69190871 | None:intergenic |
| GGTTTAACACTTGGTCTCAA+AGG | 0.545437 | 5.2:+69193758 | MS.gene29554:CDS |
| AGTAGCAATCAAATGGCTTA+GGG | 0.546429 | 5.2:+69195115 | MS.gene29554:CDS |
| TTTAGCAATTTGGCATCTAA+CGG | 0.554503 | 5.2:-69193734 | None:intergenic |
| TTCCTTTGGTACCAGCCACA+TGG | 0.555615 | 5.2:-69191607 | None:intergenic |
| CTCCATGTGGTCATACCCTA+GGG | 0.560591 | 5.2:-69193109 | None:intergenic |
| AATCTCATGCAAGGCAACAA+AGG | 0.562811 | 5.2:+69194851 | MS.gene29554:CDS |
| ATCATGGAGGTCGGATTAGG+TGG | 0.566025 | 5.2:+69192889 | MS.gene29554:CDS |
| GGTTGTGGCACTGTAAAAGC+AGG | 0.569607 | 5.2:-69193480 | None:intergenic |
| GATGTAAAGAACCAGTTACA+AGG | 0.571135 | 5.2:-69196018 | None:intergenic |
| GTGGTGTTATGATAGACTAA+AGG | 0.574335 | 5.2:+69192511 | MS.gene29554:CDS |
| CATCTTTACTACATCATGTG+AGG | 0.575661 | 5.2:-69194194 | None:intergenic |
| GAAATTGCTGGTGAAAAGGC+TGG | 0.578985 | 5.2:+69193309 | MS.gene29554:CDS |
| AGATCGCTCTTCAAAGAGTG+TGG | 0.580272 | 5.2:+69194825 | MS.gene29554:CDS |
| ATTAGACGCACTCGTGCTGA+TGG | 0.581964 | 5.2:+69191110 | MS.gene29554:CDS |
| AATGCACGTCCTTGAAGAGA+AGG | 0.589697 | 5.2:+69193512 | MS.gene29554:CDS |
| ATGGAAACATGTGCTGATCA+TGG | 0.591394 | 5.2:+69194459 | MS.gene29554:CDS |
| TCAAAAGCCATGTCCGGACA+AGG | 0.599384 | 5.2:+69190877 | None:intergenic |
| GTGTGGGAAAATCTCATGCA+AGG | 0.604958 | 5.2:+69194842 | MS.gene29554:CDS |
| CCATGTAGAGCACAGTGCAA+TGG | 0.605596 | 5.2:-69193810 | None:intergenic |
| ATTCTCAAGTTGATCTGTCG+TGG | 0.617278 | 5.2:+69194801 | MS.gene29554:CDS |
| AGGCGAGGAAGAAGCAGCTG+AGG | 0.617457 | 5.2:-69194435 | None:intergenic |
| AAAATACGATGCAACAAATG+TGG | 0.618159 | 5.2:+69192912 | MS.gene29554:CDS |
| TACTGGCAATGACGAAAACA+CGG | 0.620403 | 5.2:-69195096 | None:intergenic |
| TGTGGCTGGTACCAAAGGAA+AGG | 0.622990 | 5.2:+69191610 | MS.gene29554:CDS |
| AACGGCGGTACAACTTGAAG+AGG | 0.624363 | 5.2:-69193716 | None:intergenic |
| GATGTTGCTATCATGGAGGT+CGG | 0.624627 | 5.2:+69192880 | MS.gene29554:CDS |
| AATTATGTACTCTACCGAAG+TGG | 0.625903 | 5.2:-69194248 | None:intergenic |
| GATCGCTCTTCAAAGAGTGT+GGG | 0.626646 | 5.2:+69194826 | MS.gene29554:CDS |
| TTCCCTAGGGTATGACCACA+TGG | 0.630790 | 5.2:+69193107 | MS.gene29554:CDS |
| ATTAATAGGAAATACTCTTG+GGG | 0.634423 | 5.2:+69193287 | MS.gene29554:intron |
| GTTCAGGCACCTATTGTGTG+TGG | 0.636680 | 5.2:+69193078 | MS.gene29554:CDS |
| AAATATGAAGATTATCCATG+TGG | 0.641732 | 5.2:+69191592 | MS.gene29554:CDS |
| TGTGTGGAATAACTTCCCTA+GGG | 0.650757 | 5.2:+69193094 | MS.gene29554:CDS |
| GTATGGAAGTATGTGCGAAG+TGG | 0.650867 | 5.2:+69194101 | MS.gene29554:CDS |
| GCACATGTTTCCATCAGGCG+AGG | 0.654904 | 5.2:-69194450 | None:intergenic |
| GCGTAATATAGATTCTGTGA+AGG | 0.658574 | 5.2:-69192060 | None:intergenic |
| TCTTGAAGGCAAGTAAAGCG+AGG | 0.670114 | 5.2:-69192735 | None:intergenic |
| TCTCGGATATCAATAAGATG+AGG | 0.670344 | 5.2:-69192116 | None:intergenic |
| AGCAATTTGGCATCTAACGG+CGG | 0.678698 | 5.2:-69193731 | None:intergenic |
| GATGTAGTAAAGATGCAACA+TGG | 0.693711 | 5.2:+69194202 | MS.gene29554:CDS |
| AGTGCAGAGAAAATCCACTT+CGG | 0.700301 | 5.2:+69194234 | MS.gene29554:CDS |
| GAATCTATATTACGCAACTG+CGG | 0.720794 | 5.2:+69192068 | MS.gene29554:CDS |
| GGTAGATGTTGCTATCATGG+AGG | 0.740379 | 5.2:+69192876 | MS.gene29554:intron |
| ACTAACCAAGAATCTCCATG+TGG | 0.755156 | 5.2:-69193122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAATTGAAATTGT+AGG | + | chr5.2:69194695-69194714 | MS.gene29554:intron | 10.0% |
| !!! | CAAAAATATGTTTTAAAAAT+TGG | + | chr5.2:69193196-69193215 | MS.gene29554:intron | 10.0% |
| !!! | TTTACAATATTTTATTTTGT+GGG | + | chr5.2:69190992-69191011 | MS.gene29554:intron | 10.0% |
| !!! | TTTTACAATATTTTATTTTG+TGG | + | chr5.2:69190991-69191010 | MS.gene29554:intron | 10.0% |
| !! | AATAACCACATAATTAAAAT+AGG | - | chr5.2:69194576-69194595 | None:intergenic | 15.0% |
| !! | AATAGAAAATGAATTCAATA+TGG | - | chr5.2:69192235-69192254 | None:intergenic | 15.0% |
| !! | AATATGAATAAATCATCATT+TGG | + | chr5.2:69193593-69193612 | MS.gene29554:intron | 15.0% |
| !! | AATTATAAAAGACAAAACTA+AGG | - | chr5.2:69191950-69191969 | None:intergenic | 15.0% |
| !! | ACATAAGATTAAAATGAATA+AGG | - | chr5.2:69190914-69190933 | None:intergenic | 15.0% |
| !! | ATAACCACATAATTAAAATA+GGG | - | chr5.2:69194575-69194594 | None:intergenic | 15.0% |
| !! | ATAATGATTTAATCCAATAA+TGG | + | chr5.2:69194519-69194538 | MS.gene29554:intron | 15.0% |
| !! | CATAAGATTAAAATGAATAA+GGG | - | chr5.2:69190913-69190932 | None:intergenic | 15.0% |
| !!! | AGTTTTTTATATTTGATTCT+AGG | + | chr5.2:69193142-69193161 | MS.gene29554:intron | 15.0% |
| !!! | ATTACAATTTTCATATACTT+AGG | - | chr5.2:69191992-69192011 | None:intergenic | 15.0% |
| !!! | TAATTTCTTATTTACTTTTG+TGG | + | chr5.2:69191633-69191652 | MS.gene29554:intron | 15.0% |
| !!! | TCATTTTCTTAAATTACTAT+CGG | - | chr5.2:69191383-69191402 | None:intergenic | 15.0% |
| !!! | TTACAATATTTTATTTTGTG+GGG | + | chr5.2:69190993-69191012 | MS.gene29554:intron | 15.0% |
| !!! | TTTATTTTTAATTTTTGTGC+AGG | + | chr5.2:69192855-69192874 | MS.gene29554:intron | 15.0% |
| !! | AATTAATAGGAAATACTCTT+GGG | + | chr5.2:69193286-69193305 | MS.gene29554:intron | 20.0% |
| !! | CCATTTCCTTAAATTATTAT+CGG | - | chr5.2:69191240-69191259 | None:intergenic | 20.0% |
| !! | TATACATCTTGACTTAAAAT+TGG | + | chr5.2:69195517-69195536 | MS.gene29554:intron | 20.0% |
| !! | TCGTAAAATAATCACAAATA+TGG | - | chr5.2:69194972-69194991 | None:intergenic | 20.0% |
| !! | TTAAAAGAGATTGTTGAAAA+GGG | + | chr5.2:69195753-69195772 | MS.gene29554:intron | 20.0% |
| !! | TTTCTTAGAAGTTAATATCT+TGG | + | chr5.2:69193021-69193040 | MS.gene29554:intron | 20.0% |
| !!! | AAACTCTCTTTTAAAATTGT+TGG | + | chr5.2:69191866-69191885 | MS.gene29554:intron | 20.0% |
| !!! | AATTTTATAGATGCTAGATT+TGG | + | chr5.2:69191556-69191575 | MS.gene29554:intron | 20.0% |
| !!! | ACAATATAATGTATTTTCCT+TGG | - | chr5.2:69192388-69192407 | None:intergenic | 20.0% |
| !!! | ATAATTACACTTTTACTTTC+TGG | + | chr5.2:69194265-69194284 | MS.gene29554:intron | 20.0% |
| !!! | ATTTAATCCAATAATGGTTT+TGG | + | chr5.2:69194525-69194544 | MS.gene29554:intron | 20.0% |
| !!! | ATTTGAGGTAATTGTTATTT+AGG | + | chr5.2:69192612-69192631 | MS.gene29554:intron | 20.0% |
| !!! | ATTTTTTTGTAGAGAACAAT+AGG | + | chr5.2:69191903-69191922 | MS.gene29554:intron | 20.0% |
| !!! | CAGATATACTTATTTTTGTT+TGG | + | chr5.2:69192817-69192836 | MS.gene29554:intron | 20.0% |
| !!! | TAACTTTAAGGAAAGAAAAA+CGG | - | chr5.2:69195870-69195889 | None:intergenic | 20.0% |
| !!! | TAATTTGTTCAGCAATTAAT+AGG | + | chr5.2:69193273-69193292 | MS.gene29554:intron | 20.0% |
| !!! | TATTGATTTTTCATATGCAT+TGG | + | chr5.2:69192186-69192205 | MS.gene29554:intron | 20.0% |
| !!! | TCAATTTTGACAAAAAGAAA+AGG | - | chr5.2:69195841-69195860 | None:intergenic | 20.0% |
| !!! | TTGTCTTTTTACTTATTTTG+TGG | + | chr5.2:69192361-69192380 | MS.gene29554:intron | 20.0% |
| !!! | TTTCTTCTTATTTTCAAGAA+CGG | + | chr5.2:69193368-69193387 | MS.gene29554:intron | 20.0% |
| !!! | TTTTCCCTATTTTAATTATG+TGG | + | chr5.2:69194568-69194587 | MS.gene29554:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGTGTGCA+TGG | + | chr5.2:69194665-69194684 | MS.gene29554:intron | 20.0% |
| ! | AAATATGAAGATTATCCATG+TGG | + | chr5.2:69191592-69191611 | MS.gene29554:CDS | 25.0% |
| ! | AGGGATATATAATTCAGATA+AGG | - | chr5.2:69195948-69195967 | None:intergenic | 25.0% |
| ! | AGTATGCTAAAAATTTCTCT+TGG | - | chr5.2:69192487-69192506 | None:intergenic | 25.0% |
| ! | ATAAGAAATTACCTTTCCTT+TGG | - | chr5.2:69191624-69191643 | None:intergenic | 25.0% |
| ! | ATCAGATATTTGCAAATCTT+TGG | - | chr5.2:69195191-69195210 | None:intergenic | 25.0% |
| ! | ATTAATAGGAAATACTCTTG+GGG | + | chr5.2:69193287-69193306 | MS.gene29554:intron | 25.0% |
| ! | CAAATGAACGAATAAATACA+AGG | - | chr5.2:69193444-69193463 | None:intergenic | 25.0% |
| ! | CAATTAATAGGAAATACTCT+TGG | + | chr5.2:69193285-69193304 | MS.gene29554:intron | 25.0% |
| ! | CACATAATCAAATTAGAAGT+TGG | - | chr5.2:69194916-69194935 | None:intergenic | 25.0% |
| ! | CATTTAAACGAAATCTTTCT+CGG | - | chr5.2:69192136-69192155 | None:intergenic | 25.0% |
| ! | CCGATAATAATTTAAGGAAA+TGG | + | chr5.2:69191237-69191256 | MS.gene29554:intron | 25.0% |
| ! | GAGAAAGATTTCGTTTAAAT+GGG | + | chr5.2:69192135-69192154 | MS.gene29554:CDS | 25.0% |
| ! | GCACATATATCTTAACTTTA+AGG | - | chr5.2:69195882-69195901 | None:intergenic | 25.0% |
| ! | GTTAAAAGAGATTGTTGAAA+AGG | + | chr5.2:69195752-69195771 | MS.gene29554:intron | 25.0% |
| ! | TAAAAGACAAAACTAAGGTA+CGG | - | chr5.2:69191945-69191964 | None:intergenic | 25.0% |
| ! | TAAAAGAGATTGTTGAAAAG+GGG | + | chr5.2:69195754-69195773 | MS.gene29554:intron | 25.0% |
| ! | TATCAGAATATGGTTGAATA+CGG | + | chr5.2:69193235-69193254 | MS.gene29554:intron | 25.0% |
| ! | TCAGCAAAAAAGCTTAAAAA+AGG | - | chr5.2:69193915-69193934 | None:intergenic | 25.0% |
| ! | TGAAGAACTAAAAGATGATA+TGG | + | chr5.2:69195043-69195062 | MS.gene29554:CDS | 25.0% |
| ! | TGTACATATCTTTGTATTTC+AGG | + | chr5.2:69193056-69193075 | MS.gene29554:intron | 25.0% |
| ! | TGTTCTCTTTCAGTATTTAA+AGG | + | chr5.2:69191157-69191176 | MS.gene29554:CDS | 25.0% |
| ! | TTAATTGCTGAACAAATTAG+TGG | - | chr5.2:69193272-69193291 | None:intergenic | 25.0% |
| ! | TTAGATCAATATACTCAACA+GGG | - | chr5.2:69195967-69195986 | None:intergenic | 25.0% |
| ! | TTATCTGTGTATAACAAAGT+TGG | + | chr5.2:69194752-69194771 | MS.gene29554:CDS | 25.0% |
| ! | TTGTTATACACAGATAAACT+TGG | - | chr5.2:69194749-69194768 | None:intergenic | 25.0% |
| ! | TTTAGCTGTGGATTTATAAT+TGG | + | chr5.2:69191760-69191779 | MS.gene29554:intron | 25.0% |
| !! | ACATGATGAATTTTGAATCT+TGG | + | chr5.2:69192985-69193004 | MS.gene29554:intron | 25.0% |
| !! | ATACACAAAGTATCAGAATA+TGG | + | chr5.2:69193225-69193244 | MS.gene29554:intron | 25.0% |
| !! | ATGATCATTTCTACTTCTTT+TGG | + | chr5.2:69193566-69193585 | MS.gene29554:intron | 25.0% |
| !! | ATTTTTGTAGAAGGTGATAA+TGG | + | chr5.2:69191023-69191042 | MS.gene29554:intron | 25.0% |
| !! | TATGTTCATTCTTTCACTTT+TGG | + | chr5.2:69190929-69190948 | MS.gene29554:intron | 25.0% |
| !! | TTAACACCCATTCTTTTATT+GGG | - | chr5.2:69195737-69195756 | None:intergenic | 25.0% |
| !! | TTATTCGTTCATTTGTTTCT+AGG | + | chr5.2:69193449-69193468 | MS.gene29554:intron | 25.0% |
| !! | TTCAAATCTTATCTGAAACA+TGG | + | chr5.2:69192644-69192663 | MS.gene29554:intron | 25.0% |
| !! | TTTAACACCCATTCTTTTAT+TGG | - | chr5.2:69195738-69195757 | None:intergenic | 25.0% |
| !! | TTTTTGCAATTATTGATGTG+TGG | + | chr5.2:69191703-69191722 | MS.gene29554:intron | 25.0% |
| !! | TTTTTGTAGAAGGTGATAAT+GGG | + | chr5.2:69191024-69191043 | MS.gene29554:intron | 25.0% |
| !!! | ACATGGTTTTATCATTTCAA+TGG | + | chr5.2:69192661-69192680 | MS.gene29554:intron | 25.0% |
| !!! | AGAAATTTTTAGCATACTTC+TGG | + | chr5.2:69192489-69192508 | MS.gene29554:CDS | 25.0% |
| !!! | ATGTTCATTCTTTCACTTTT+GGG | + | chr5.2:69190930-69190949 | MS.gene29554:intron | 25.0% |
| !!! | ATTTTGACAAAAAGAAAAGG+AGG | - | chr5.2:69195838-69195857 | None:intergenic | 25.0% |
| !!! | ATTTTTAGCTGAATTTCATG+TGG | + | chr5.2:69195356-69195375 | MS.gene29554:intron | 25.0% |
| !!! | GAACTTGTTTTCTTTTTAGA+TGG | + | chr5.2:69194061-69194080 | MS.gene29554:CDS | 25.0% |
| !!! | GTGGTTATTTTTTGTTTACT+GGG | + | chr5.2:69194587-69194606 | MS.gene29554:intron | 25.0% |
| !!! | TATGTTGTTATTTTGAATCG+TGG | + | chr5.2:69192016-69192035 | MS.gene29554:intron | 25.0% |
| !!! | TGTGGTTATTTTTTGTTTAC+TGG | + | chr5.2:69194586-69194605 | MS.gene29554:intron | 25.0% |
| !!! | TTTATTGGGTTTTGAGTATT+TGG | + | chr5.2:69191495-69191514 | MS.gene29554:intron | 25.0% |
| !!! | TTTTTAGCTGAATTTCATGT+GGG | + | chr5.2:69195357-69195376 | MS.gene29554:intron | 25.0% |
| AAAAGAGATTGTTGAAAAGG+GGG | + | chr5.2:69195755-69195774 | MS.gene29554:intron | 30.0% | |
| AAAATACGATGCAACAAATG+TGG | + | chr5.2:69192912-69192931 | MS.gene29554:CDS | 30.0% | |
| AACACTGTTCTCATAACATA+AGG | - | chr5.2:69195608-69195627 | None:intergenic | 30.0% | |
| AAGTTAATATCTTGGTGAAC+AGG | + | chr5.2:69193029-69193048 | MS.gene29554:intron | 30.0% | |
| ACAAAAAGAAAAGGAGGTAA+TGG | - | chr5.2:69195832-69195851 | None:intergenic | 30.0% | |
| AGTTTATTGCTTCTTGTAGT+TGG | + | chr5.2:69191731-69191750 | MS.gene29554:intron | 30.0% | |
| AGTTTCTATGTAACCTTGTT+TGG | + | chr5.2:69192794-69192813 | MS.gene29554:intron | 30.0% | |
| ATAAGTATATCTGCCAAACA+AGG | - | chr5.2:69192810-69192829 | None:intergenic | 30.0% | |
| ATCAAACTGATCACCAAAAT+TGG | - | chr5.2:69191138-69191157 | None:intergenic | 30.0% | |
| CAAAAGACCAAAACCATTAT+TGG | - | chr5.2:69194535-69194554 | None:intergenic | 30.0% | |
| CAAAATTGAACTTCTCATGA+TGG | - | chr5.2:69191683-69191702 | None:intergenic | 30.0% | |
| CGAGAAAGATTTCGTTTAAA+TGG | + | chr5.2:69192134-69192153 | MS.gene29554:CDS | 30.0% | |
| GAGCATCAATATTTAAATGC+TGG | + | chr5.2:69193782-69193801 | MS.gene29554:CDS | 30.0% | |
| GTATGAATTTCAACGAATAC+TGG | + | chr5.2:69195426-69195445 | MS.gene29554:intron | 30.0% | |
| GTATTCGTTGAAATTCATAC+AGG | - | chr5.2:69195426-69195445 | None:intergenic | 30.0% | |
| GTTAGATCAATATACTCAAC+AGG | - | chr5.2:69195968-69195987 | None:intergenic | 30.0% | |
| TAAGATGAGGAGATGTAAAA+AGG | - | chr5.2:69192106-69192125 | None:intergenic | 30.0% | |
| TACAACAAGAACAGTACTTA+TGG | - | chr5.2:69191805-69191824 | None:intergenic | 30.0% | |
| TACCAGAACAGTTCATAAAA+GGG | + | chr5.2:69193966-69193985 | MS.gene29554:CDS | 30.0% | |
| TAGACGCCGATAATAATTTA+AGG | + | chr5.2:69191231-69191250 | MS.gene29554:intron | 30.0% | |
| TATGTTATGAGAACAGTGTT+AGG | + | chr5.2:69195608-69195627 | MS.gene29554:intron | 30.0% | |
| TCAACACTCATTCTTTGATT+GGG | + | chr5.2:69195641-69195660 | MS.gene29554:intron | 30.0% | |
| TGTTAAACCGTTTAGCAATT+TGG | - | chr5.2:69193747-69193766 | None:intergenic | 30.0% | |
| TGTTGTACTTCTCATAAAAG+CGG | + | chr5.2:69191818-69191837 | MS.gene29554:intron | 30.0% | |
| TTAACAAGTGCAAGTTTACA+AGG | + | chr5.2:69193989-69194008 | MS.gene29554:CDS | 30.0% | |
| TTACCAGAACAGTTCATAAA+AGG | + | chr5.2:69193965-69193984 | MS.gene29554:CDS | 30.0% | |
| TTAGATGCCAAATTGCTAAA+CGG | + | chr5.2:69193737-69193756 | MS.gene29554:CDS | 30.0% | |
| TTCAACACTCATTCTTTGAT+TGG | + | chr5.2:69195640-69195659 | MS.gene29554:intron | 30.0% | |
| TTTAGCAATTTGGCATCTAA+CGG | - | chr5.2:69193737-69193756 | None:intergenic | 30.0% | |
| TTTATAGATGCTAGATTTGG+AGG | + | chr5.2:69191559-69191578 | MS.gene29554:intron | 30.0% | |
| ! | AAATCAGTCAGTATGTTTTC+AGG | + | chr5.2:69195151-69195170 | MS.gene29554:CDS | 30.0% |
| ! | AATTGTCTTGTTAATGCATC+AGG | + | chr5.2:69195994-69196013 | MS.gene29554:intron | 30.0% |
| !! | AGGTCCTACTACTTTTAAAA+TGG | - | chr5.2:69195406-69195425 | None:intergenic | 30.0% |
| !! | GAACTGCTACTTCTTTTAAT+CGG | + | chr5.2:69194322-69194341 | MS.gene29554:intron | 30.0% |
| !! | GATTATGTGCGATTATTTTG+TGG | + | chr5.2:69194927-69194946 | MS.gene29554:intron | 30.0% |
| !! | GGTGTTTTCATTTTTGTAGA+AGG | + | chr5.2:69191014-69191033 | MS.gene29554:intron | 30.0% |
| !! | TATCTTTGTATTTCAGGTTC+AGG | + | chr5.2:69193062-69193081 | MS.gene29554:intron | 30.0% |
| !! | TGACCCATTTTAAAAGTAGT+AGG | + | chr5.2:69195399-69195418 | MS.gene29554:intron | 30.0% |
| !! | TGTTCATTCTTTCACTTTTG+GGG | + | chr5.2:69190931-69190950 | MS.gene29554:intron | 30.0% |
| !! | TTCTTATGAAGAAGCATTAG+AGG | + | chr5.2:69191070-69191089 | MS.gene29554:CDS | 30.0% |
| !!! | AATTTTTAGCATACTTCTGG+TGG | + | chr5.2:69192492-69192511 | MS.gene29554:CDS | 30.0% |
| !!! | CAATAATGGTTTTGGTCTTT+TGG | + | chr5.2:69194533-69194552 | MS.gene29554:intron | 30.0% |
| !!! | GGTCCTACTACTTTTAAAAT+GGG | - | chr5.2:69195405-69195424 | None:intergenic | 30.0% |
| !!! | GTTATTTTTTGTTTACTGGG+AGG | + | chr5.2:69194590-69194609 | MS.gene29554:intron | 30.0% |
| !!! | TTTACTTATTTTGTGGACCA+AGG | + | chr5.2:69192368-69192387 | MS.gene29554:intron | 30.0% |
| AAACGGAAATAGTTAGGCAT+TGG | - | chr5.2:69192715-69192734 | None:intergenic | 35.0% | |
| AAGTGCAAGTTTACAAGGAA+GGG | + | chr5.2:69193994-69194013 | MS.gene29554:CDS | 35.0% | |
| AATTATGTACTCTACCGAAG+TGG | - | chr5.2:69194251-69194270 | None:intergenic | 35.0% | |
| ACATAGAAACTCAAAGCACA+CGG | - | chr5.2:69192785-69192804 | None:intergenic | 35.0% | |
| ACTACATCATGTGAGGATTT+AGG | - | chr5.2:69194190-69194209 | None:intergenic | 35.0% | |
| AGTAGCAATCAAATGGCTTA+GGG | + | chr5.2:69195115-69195134 | MS.gene29554:CDS | 35.0% | |
| AGTCCACCCAATAAAAGAAT+GGG | + | chr5.2:69195728-69195747 | MS.gene29554:intron | 35.0% | |
| AGTTGGAGAAAATTTAGCTG+TGG | + | chr5.2:69191748-69191767 | MS.gene29554:intron | 35.0% | |
| CATCTTTACTACATCATGTG+AGG | - | chr5.2:69194197-69194216 | None:intergenic | 35.0% | |
| GAAGTCAACGATGATGATTT+CGG | - | chr5.2:69191053-69191072 | None:intergenic | 35.0% | |
| GAAGTTATTCCACACACAAT+AGG | - | chr5.2:69193090-69193109 | None:intergenic | 35.0% | |
| GAATCTATATTACGCAACTG+CGG | + | chr5.2:69192068-69192087 | MS.gene29554:CDS | 35.0% | |
| GATGTAAAGAACCAGTTACA+AGG | - | chr5.2:69196021-69196040 | None:intergenic | 35.0% | |
| GATGTAGTAAAGATGCAACA+TGG | + | chr5.2:69194202-69194221 | MS.gene29554:CDS | 35.0% | |
| GCGTAATATAGATTCTGTGA+AGG | - | chr5.2:69192063-69192082 | None:intergenic | 35.0% | |
| TAACCACACATGTGACATAT+CGG | + | chr5.2:69191423-69191442 | MS.gene29554:intron | 35.0% | |
| TCTCGGATATCAATAAGATG+AGG | - | chr5.2:69192119-69192138 | None:intergenic | 35.0% | |
| TGAAAAGGCTGGTATCTTTA+AGG | + | chr5.2:69193320-69193339 | MS.gene29554:CDS | 35.0% | |
| TGATTGGGTAAAATCGATGT+TGG | + | chr5.2:69195656-69195675 | MS.gene29554:intron | 35.0% | |
| TTGCTAAACGGTTTAACACT+TGG | + | chr5.2:69193749-69193768 | MS.gene29554:CDS | 35.0% | |
| TTTCATGTGGGTCAATTGTT+CGG | + | chr5.2:69195369-69195388 | MS.gene29554:intron | 35.0% | |
| ! | AACCCTTTTATGAACTGTTC+TGG | - | chr5.2:69193971-69193990 | None:intergenic | 35.0% |
| ! | AATTTTACCTGCTAAGGCAA+GGG | - | chr5.2:69195009-69195028 | None:intergenic | 35.0% |
| ! | ACCTAGGTGAATTGGTTTAT+TGG | + | chr5.2:69191480-69191499 | MS.gene29554:intron | 35.0% |
| ! | ACTGGTTCTTTACATCTTGT+TGG | + | chr5.2:69196025-69196044 | MS.gene29554:CDS | 35.0% |
| ! | CCTAGGTGAATTGGTTTATT+GGG | + | chr5.2:69191481-69191500 | MS.gene29554:intron | 35.0% |
| ! | GAGTATTTGGTGACTTTGTT+AGG | + | chr5.2:69191508-69191527 | MS.gene29554:intron | 35.0% |
| ! | GTCAGTAATTTTACCTGCTA+AGG | - | chr5.2:69195015-69195034 | None:intergenic | 35.0% |
| ! | TAATTTTACCTGCTAAGGCA+AGG | - | chr5.2:69195010-69195029 | None:intergenic | 35.0% |
| !! | ATGGTTCTAATTCCATTCCA+TGG | - | chr5.2:69194953-69194972 | None:intergenic | 35.0% |
| !! | ATTATTTTGTGGCCATGGAA+TGG | + | chr5.2:69194938-69194957 | MS.gene29554:intron | 35.0% |
| !! | GGCTATGTGTTTTGAATTTG+AGG | + | chr5.2:69192597-69192616 | MS.gene29554:intron | 35.0% |
| !! | GTGGTGTTATGATAGACTAA+AGG | + | chr5.2:69192511-69192530 | MS.gene29554:CDS | 35.0% |
| !! | TAGAAGTTGGAGTTCTGAAA+AGG | - | chr5.2:69194903-69194922 | None:intergenic | 35.0% |
| !! | TATGCTTGTGTGTTTTTGTG+TGG | + | chr5.2:69192209-69192228 | MS.gene29554:intron | 35.0% |
| !! | TTGGTCTTTTGGAGAATAAG+TGG | + | chr5.2:69194544-69194563 | MS.gene29554:intron | 35.0% |
| !!! | CTTTTAAAATTGTTGGCGAC+AGG | + | chr5.2:69191873-69191892 | MS.gene29554:intron | 35.0% |
| AAGATGCAACATGGAGAAAG+AGG | + | chr5.2:69194211-69194230 | MS.gene29554:CDS | 40.0% | |
| AATACTCTTGGGGAAATTGC+TGG | + | chr5.2:69193297-69193316 | MS.gene29554:CDS | 40.0% | |
| AATCTCATGCAAGGCAACAA+AGG | + | chr5.2:69194851-69194870 | MS.gene29554:CDS | 40.0% | |
| ACTAACCAAGAATCTCCATG+TGG | - | chr5.2:69193125-69193144 | None:intergenic | 40.0% | |
| AGCTCATAGTCCTGAAAGTA+TGG | + | chr5.2:69194084-69194103 | MS.gene29554:CDS | 40.0% | |
| AGTGCAGAGAAAATCCACTT+CGG | + | chr5.2:69194234-69194253 | MS.gene29554:CDS | 40.0% | |
| ATAAAGTTGTGGGACACATG+TGG | + | chr5.2:69195705-69195724 | MS.gene29554:intron | 40.0% | |
| ATGAAGATTATCCATGTGGC+TGG | + | chr5.2:69191596-69191615 | MS.gene29554:CDS | 40.0% | |
| ATGAGGAGATGTAAAAAGGC+CGG | - | chr5.2:69192102-69192121 | None:intergenic | 40.0% | |
| ATGTGTCCCACAACTTTATG+TGG | - | chr5.2:69195704-69195723 | None:intergenic | 40.0% | |
| ATGTGTCCCACATAAAGTTG+TGG | + | chr5.2:69195694-69195713 | MS.gene29554:intron | 40.0% | |
| ATTGAGAAGCCTTCTCTTCA+AGG | - | chr5.2:69193524-69193543 | None:intergenic | 40.0% | |
| CAAGTGCAAGTTTACAAGGA+AGG | + | chr5.2:69193993-69194012 | MS.gene29554:CDS | 40.0% | |
| CAGTAGCAATCAAATGGCTT+AGG | + | chr5.2:69195114-69195133 | MS.gene29554:CDS | 40.0% | |
| CATTGCCAGTAGCAATCAAA+TGG | + | chr5.2:69195108-69195127 | MS.gene29554:CDS | 40.0% | |
| CCCAATAAACCAATTCACCT+AGG | - | chr5.2:69191484-69191503 | None:intergenic | 40.0% | |
| CGACAGATCAACTTGAGAAT+CGG | - | chr5.2:69194801-69194820 | None:intergenic | 40.0% | |
| CTAAGCCATTTGATTGCTAC+TGG | - | chr5.2:69195116-69195135 | None:intergenic | 40.0% | |
| CTACATGGCTAAAAAGGACT+GGG | + | chr5.2:69193825-69193844 | MS.gene29554:CDS | 40.0% | |
| CTCAGCTGCAAATATCTTGA+AGG | - | chr5.2:69192752-69192771 | None:intergenic | 40.0% | |
| GAACTAATGCAGCGACAAAA+GGG | - | chr5.2:69192411-69192430 | None:intergenic | 40.0% | |
| GAGTCCACCCAATAAAAGAA+TGG | + | chr5.2:69195727-69195746 | MS.gene29554:intron | 40.0% | |
| GCACATACTTCCATACTTTC+AGG | - | chr5.2:69194097-69194116 | None:intergenic | 40.0% | |
| GCAGACAATGTTGAGATAGA+TGG | - | chr5.2:69195299-69195318 | None:intergenic | 40.0% | |
| GGGAATAACAATACCTTGTC+CGG | - | chr5.2:69190893-69190912 | None:intergenic | 40.0% | |
| GGTTTAACACTTGGTCTCAA+AGG | + | chr5.2:69193758-69193777 | MS.gene29554:CDS | 40.0% | |
| GTATGTTTCCACGCATATGA+CGG | + | chr5.2:69192533-69192552 | MS.gene29554:intron | 40.0% | |
| GTCTGGACTGTTATCTTTGA+TGG | - | chr5.2:69194137-69194156 | None:intergenic | 40.0% | |
| GTTGTCGATGAAACAGTGTT+TGG | - | chr5.2:69194159-69194178 | None:intergenic | 40.0% | |
| TACTGGCAATGACGAAAACA+CGG | - | chr5.2:69195099-69195118 | None:intergenic | 40.0% | |
| TATGACCACATGGAGATTCT+TGG | + | chr5.2:69193117-69193136 | MS.gene29554:CDS | 40.0% | |
| TCTACATGGCTAAAAAGGAC+TGG | + | chr5.2:69193824-69193843 | MS.gene29554:CDS | 40.0% | |
| TGAACTAATGCAGCGACAAA+AGG | - | chr5.2:69192412-69192431 | None:intergenic | 40.0% | |
| TGCTATGACTTAAGACACAC+TGG | + | chr5.2:69191204-69191223 | MS.gene29554:intron | 40.0% | |
| TGTGCTCTACATGGCTAAAA+AGG | + | chr5.2:69193819-69193838 | MS.gene29554:CDS | 40.0% | |
| TGTGTCCCACAACTTTATGT+GGG | - | chr5.2:69195703-69195722 | None:intergenic | 40.0% | |
| TGTGTCCCACATAAAGTTGT+GGG | + | chr5.2:69195695-69195714 | MS.gene29554:intron | 40.0% | |
| TGTGTGGAATAACTTCCCTA+GGG | + | chr5.2:69193094-69193113 | MS.gene29554:CDS | 40.0% | |
| TTTGTGGCTAACTGATTGCT+TGG | + | chr5.2:69191649-69191668 | MS.gene29554:intron | 40.0% | |
| ! | ACACCCATTCTTTTATTGGG+TGG | - | chr5.2:69195734-69195753 | None:intergenic | 40.0% |
| ! | ATGGAAACATGTGCTGATCA+TGG | + | chr5.2:69194459-69194478 | MS.gene29554:CDS | 40.0% |
| ! | CTGTCATAAGCTTTGTCAGA+AGG | + | chr5.2:69192293-69192312 | MS.gene29554:intron | 40.0% |
| ! | GGGACACATTTTCAAAGTGT+AGG | - | chr5.2:69195683-69195702 | None:intergenic | 40.0% |
| ! | TTTACTGGGAGGAAAGTGTA+AGG | + | chr5.2:69194601-69194620 | MS.gene29554:intron | 40.0% |
| !! | ATTCTCAAGTTGATCTGTCG+TGG | + | chr5.2:69194801-69194820 | MS.gene29554:CDS | 40.0% |
| !!! | ATTTTGAATCGTGGTGCCAT+AGG | + | chr5.2:69192025-69192044 | MS.gene29554:intron | 40.0% |
| !!! | TTTTGAATCGTGGTGCCATA+GGG | + | chr5.2:69192026-69192045 | MS.gene29554:intron | 40.0% |
| AAGAGAACTTTGCCAACTCC+AGG | + | chr5.2:69193691-69193710 | MS.gene29554:intron | 45.0% | |
| AAGGTGCATGTAGATCCCTA+TGG | - | chr5.2:69192044-69192063 | None:intergenic | 45.0% | |
| AATGCACGTCCTTGAAGAGA+AGG | + | chr5.2:69193512-69193531 | MS.gene29554:CDS | 45.0% | |
| ACACCGATATGTCACATGTG+TGG | - | chr5.2:69191429-69191448 | None:intergenic | 45.0% | |
| AGATCGCTCTTCAAAGAGTG+TGG | + | chr5.2:69194825-69194844 | MS.gene29554:CDS | 45.0% | |
| AGCAATTTGGCATCTAACGG+CGG | - | chr5.2:69193734-69193753 | None:intergenic | 45.0% | |
| AGGCAAGTAAAGCGAGGAAA+CGG | - | chr5.2:69192732-69192751 | None:intergenic | 45.0% | |
| AGTACTCTCTAGATTTCGCG+AGG | + | chr5.2:69194484-69194503 | MS.gene29554:intron | 45.0% | |
| ATGCATCAGGTCCTTGTAAC+TGG | + | chr5.2:69196007-69196026 | MS.gene29554:intron | 45.0% | |
| ATGCTAGACACTGACACATG+TGG | + | chr5.2:69191299-69191318 | MS.gene29554:intron | 45.0% | |
| CAAGATATTTGCAGCTGAGC+AGG | + | chr5.2:69192753-69192772 | MS.gene29554:CDS | 45.0% | |
| CGATGAAACAGTGTTTGGTC+TGG | - | chr5.2:69194154-69194173 | None:intergenic | 45.0% | |
| CTAAAAAGGACTGGGCATCT+TGG | + | chr5.2:69193833-69193852 | MS.gene29554:CDS | 45.0% | |
| CTGGTAAAGTCTCCTTCATG+CGG | - | chr5.2:69193952-69193971 | None:intergenic | 45.0% | |
| GAAATTGCTGGTGAAAAGGC+TGG | + | chr5.2:69193309-69193328 | MS.gene29554:CDS | 45.0% | |
| GAGATGTAAAAAGGCCGGTA+CGG | - | chr5.2:69192097-69192116 | None:intergenic | 45.0% | |
| GATCAGCACATGTTTCCATC+AGG | - | chr5.2:69194458-69194477 | None:intergenic | 45.0% | |
| GATGTTGCTATCATGGAGGT+CGG | + | chr5.2:69192880-69192899 | MS.gene29554:CDS | 45.0% | |
| GCAGGTAGATGTTGCTATCA+TGG | + | chr5.2:69192873-69192892 | MS.gene29554:intron | 45.0% | |
| GCGAGGAAACGGAAATAGTT+AGG | - | chr5.2:69192721-69192740 | None:intergenic | 45.0% | |
| GCTACATATGACACCAACAC+TGG | + | chr5.2:69191347-69191366 | MS.gene29554:intron | 45.0% | |
| GGCACTGTGTTCACAATTAC+TGG | - | chr5.2:69195078-69195097 | None:intergenic | 45.0% | |
| GGTAGATGTTGCTATCATGG+AGG | + | chr5.2:69192876-69192895 | MS.gene29554:intron | 45.0% | |
| GTGTGGGAAAATCTCATGCA+AGG | + | chr5.2:69194842-69194861 | MS.gene29554:CDS | 45.0% | |
| GTGTGTGGAATAACTTCCCT+AGG | + | chr5.2:69193093-69193112 | MS.gene29554:CDS | 45.0% | |
| GTTGTGCTACCTAGGTGAAT+TGG | + | chr5.2:69191472-69191491 | MS.gene29554:intron | 45.0% | |
| GTTTCGCACTGTGCTTGATT+AGG | + | chr5.2:69193649-69193668 | MS.gene29554:intron | 45.0% | |
| TCTTGAAGGCAAGTAAAGCG+AGG | - | chr5.2:69192738-69192757 | None:intergenic | 45.0% | |
| TGGGGAAATTGCTGGTGAAA+AGG | + | chr5.2:69193305-69193324 | MS.gene29554:CDS | 45.0% | |
| TGGTAAAGTCTCCTTCATGC+GGG | - | chr5.2:69193951-69193970 | None:intergenic | 45.0% | |
| TTGTTCATCTACCCGCATGA+AGG | + | chr5.2:69193937-69193956 | MS.gene29554:intron | 45.0% | |
| ! | GATCGCTCTTCAAAGAGTGT+GGG | + | chr5.2:69194826-69194845 | MS.gene29554:CDS | 45.0% |
| ! | GCATCTTGGTGACACATACT+TGG | + | chr5.2:69193847-69193866 | MS.gene29554:CDS | 45.0% |
| ! | GTATGGAAGTATGTGCGAAG+TGG | + | chr5.2:69194101-69194120 | MS.gene29554:CDS | 45.0% |
| ! | TTTCCACGCATATGACGGAA+AGG | + | chr5.2:69192538-69192557 | MS.gene29554:intron | 45.0% |
| !! | ATCGGTGTCAAACATCGACA+TGG | + | chr5.2:69191441-69191460 | MS.gene29554:intron | 45.0% |
| !! | CGTGCTGATGGTACCAATTT+TGG | + | chr5.2:69191122-69191141 | MS.gene29554:CDS | 45.0% |
| !! | GTACAACTTGAAGAGGTACC+TGG | - | chr5.2:69193712-69193731 | None:intergenic | 45.0% |
| !! | GTGCGATTATTTTGTGGCCA+TGG | + | chr5.2:69194933-69194952 | MS.gene29554:intron | 45.0% |
| !! | TGCATTGCTTCTTCAGGTTG+TGG | - | chr5.2:69193498-69193517 | None:intergenic | 45.0% |
| !! | AATTGAAAAAATTAATAAAA+AGG | + | chr5.2:69192576-69192595 | MS.gene29554:intron | 5.0% |
| AAACATCGACATGGCCACTC+TGG | + | chr5.2:69191450-69191469 | MS.gene29554:intron | 50.0% | |
| AACGGCGGTACAACTTGAAG+AGG | - | chr5.2:69193719-69193738 | None:intergenic | 50.0% | |
| ACTCCTTTCCGTCATATGCG+TGG | - | chr5.2:69192544-69192563 | None:intergenic | 50.0% | |
| AGGACGTGCATTGCTTCTTC+AGG | - | chr5.2:69193504-69193523 | None:intergenic | 50.0% | |
| AGGCAAGGGATCAGCAAGTA+AGG | - | chr5.2:69194995-69195014 | None:intergenic | 50.0% | |
| ATCCATGTGGCTGGTACCAA+AGG | + | chr5.2:69191605-69191624 | MS.gene29554:CDS | 50.0% | |
| ATTAGACGCACTCGTGCTGA+TGG | + | chr5.2:69191110-69191129 | MS.gene29554:CDS | 50.0% | |
| CCATGTAGAGCACAGTGCAA+TGG | - | chr5.2:69193813-69193832 | None:intergenic | 50.0% | |
| CCATTGCACTGTGCTCTACA+TGG | + | chr5.2:69193810-69193829 | MS.gene29554:CDS | 50.0% | |
| CTCCATGTGGTCATACCCTA+GGG | - | chr5.2:69193112-69193131 | None:intergenic | 50.0% | |
| GCTATCATGGAGGTCGGATT+AGG | + | chr5.2:69192886-69192905 | MS.gene29554:CDS | 50.0% | |
| GGTTGTGGCACTGTAAAAGC+AGG | - | chr5.2:69193483-69193502 | None:intergenic | 50.0% | |
| GTTCAGGCACCTATTGTGTG+TGG | + | chr5.2:69193078-69193097 | MS.gene29554:CDS | 50.0% | |
| TCTCCATGTGGTCATACCCT+AGG | - | chr5.2:69193113-69193132 | None:intergenic | 50.0% | |
| TGACACCAACACTGGCATGT+AGG | + | chr5.2:69191355-69191374 | MS.gene29554:intron | 50.0% | |
| TGTGGCTGGTACCAAAGGAA+AGG | + | chr5.2:69191610-69191629 | MS.gene29554:CDS | 50.0% | |
| TTCCCTAGGGTATGACCACA+TGG | + | chr5.2:69193107-69193126 | MS.gene29554:CDS | 50.0% | |
| TTCCTTTGGTACCAGCCACA+TGG | - | chr5.2:69191610-69191629 | None:intergenic | 50.0% | |
| ! | ATCATGGAGGTCGGATTAGG+TGG | + | chr5.2:69192889-69192908 | MS.gene29554:CDS | 50.0% |
| !! | CTTGAAGAGGTACCTGGAGT+TGG | - | chr5.2:69193706-69193725 | None:intergenic | 50.0% |
| CCACTCTGGTTGTGCTACCT+AGG | + | chr5.2:69191464-69191483 | MS.gene29554:intron | 55.0% | |
| CCTAGGTAGCACAACCAGAG+TGG | - | chr5.2:69191467-69191486 | None:intergenic | 55.0% | |
| GCACATGTTTCCATCAGGCG+AGG | - | chr5.2:69194453-69194472 | None:intergenic | 55.0% | |
| TGCTGATCCCTTGCCTTAGC+AGG | + | chr5.2:69194999-69195018 | MS.gene29554:intron | 55.0% | |
| AGGCGAGGAAGAAGCAGCTG+AGG | - | chr5.2:69194438-69194457 | None:intergenic | 60.0% | |
| CGCAACTGCGGTTTCCGTAC+CGG | + | chr5.2:69192080-69192099 | MS.gene29554:CDS | 60.0% | |
| CGGTGCCTACATGCCAGTGT+TGG | - | chr5.2:69191363-69191382 | None:intergenic | 60.0% | |
| GCTGCTTCTTCCTCGCCTGA+TGG | + | chr5.2:69194440-69194459 | MS.gene29554:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 69190886 | 69196075 | 69190886 | ID=MS.gene29554 |
| chr5.2 | mRNA | 69190886 | 69196075 | 69190886 | ID=MS.gene29554.t1;Parent=MS.gene29554 |
| chr5.2 | exon | 69190886 | 69190898 | 69190886 | ID=MS.gene29554.t1.exon1;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69190886 | 69190898 | 69190886 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69191033 | 69191178 | 69191033 | ID=MS.gene29554.t1.exon2;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69191033 | 69191178 | 69191033 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69191566 | 69191631 | 69191566 | ID=MS.gene29554.t1.exon3;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69191566 | 69191631 | 69191566 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69192047 | 69192156 | 69192047 | ID=MS.gene29554.t1.exon4;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69192047 | 69192156 | 69192047 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69192472 | 69192532 | 69192472 | ID=MS.gene29554.t1.exon5;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69192472 | 69192532 | 69192472 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69192691 | 69192774 | 69192691 | ID=MS.gene29554.t1.exon6;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69192691 | 69192774 | 69192691 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69192877 | 69192933 | 69192877 | ID=MS.gene29554.t1.exon7;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69192877 | 69192933 | 69192877 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69193078 | 69193138 | 69193078 | ID=MS.gene29554.t1.exon8;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69193078 | 69193138 | 69193078 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69193295 | 69193341 | 69193295 | ID=MS.gene29554.t1.exon9;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69193295 | 69193341 | 69193295 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69193471 | 69193548 | 69193471 | ID=MS.gene29554.t1.exon10;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69193471 | 69193548 | 69193471 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69193713 | 69193877 | 69193713 | ID=MS.gene29554.t1.exon11;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69193713 | 69193877 | 69193713 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69193959 | 69194255 | 69193959 | ID=MS.gene29554.t1.exon12;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69193959 | 69194255 | 69193959 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69194402 | 69194480 | 69194402 | ID=MS.gene29554.t1.exon13;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69194402 | 69194480 | 69194402 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69194717 | 69194872 | 69194717 | ID=MS.gene29554.t1.exon14;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69194717 | 69194872 | 69194717 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69195021 | 69195172 | 69195021 | ID=MS.gene29554.t1.exon15;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69195021 | 69195172 | 69195021 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| chr5.2 | exon | 69196016 | 69196075 | 69196016 | ID=MS.gene29554.t1.exon16;Parent=MS.gene29554.t1 |
| chr5.2 | CDS | 69196016 | 69196075 | 69196016 | ID=cds.MS.gene29554.t1;Parent=MS.gene29554.t1 |
| Gene Sequence |
| Protein sequence |
