AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053565


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053565.t1 MTR_4g093870 98.894 1266 14 0 1 1266 1 1266 0.0 2573
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053565.t1 AT5G37830 81.181 1270 231 2 1 1266 1 1266 0.0 2155

Find 315 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCCTTATGCTGCGGTTTA+TGG 0.137030 4.4:-21254526 MS.gene053565:CDS
ATTTCAGTCAACTGCCTTAT+TGG 0.141151 4.4:+21254721 None:intergenic
GCTAAGCCCCTCTTCAAATT+TGG 0.165612 4.4:+21255362 None:intergenic
TGTTGTATTTACTGCATTTC+AGG 0.182602 4.4:-21252856 MS.gene053565:CDS
TCCAATATGGACTTTGAAAA+TGG 0.184985 4.4:+21253530 None:intergenic
TTATAGTAGCCTTCAATTAT+AGG 0.193665 4.4:+21254166 None:intergenic
GTGCAGAAGTTTATGGTAAT+TGG 0.196069 4.4:-21253070 MS.gene053565:CDS
GCTTCTTCGCCAATTGTTAA+AGG 0.201288 4.4:-21255681 MS.gene053565:CDS
GCCATTGATTGGATTTGATA+TGG 0.207754 4.4:-21255199 MS.gene053565:CDS
GATTATTTCCCATCCATATT+TGG 0.208240 4.4:-21254913 MS.gene053565:CDS
GAATTATGGCACCAGCAATT+TGG 0.224339 4.4:+21255118 None:intergenic
CCAATTGTTAAAGGTATTTC+GGG 0.228167 4.4:-21255672 MS.gene053565:CDS
GTTTCCATATTTGGTTATAA+TGG 0.234888 4.4:+21254009 None:intergenic
GCCAATTGTTAAAGGTATTT+CGG 0.235388 4.4:-21255673 MS.gene053565:CDS
GAAAGAATGCTGACGGTAAC+TGG 0.235550 4.4:+21252555 None:intergenic
AACAAGCTTAAACGCCTTAA+TGG 0.241080 4.4:+21253496 None:intergenic
GCTGCAGCTGTTACGGCTTC+TGG 0.264309 4.4:+21253041 None:intergenic
GGGTGTGCTCCAACTGATTC+TGG 0.269138 4.4:+21255012 None:intergenic
CATGCACTTGCTTGCTTTGG+AGG 0.272406 4.4:-21254676 MS.gene053565:CDS
GACAAGTAGTCTTTAATAAC+TGG 0.273690 4.4:+21255396 None:intergenic
TTCGTTGGCAACTCAATTAC+TGG 0.276459 4.4:-21253730 MS.gene053565:CDS
GTCCTCATTTGGGCCAAATA+TGG 0.286234 4.4:+21254900 None:intergenic
ACATTTGGAGATGACACTTT+TGG 0.286864 4.4:-21252798 MS.gene053565:CDS
GGTTATAATGGCTCTACAAT+TGG 0.294357 4.4:+21254021 None:intergenic
AATTCTGTTGAGGTGCTTCC+TGG 0.296997 4.4:-21252423 MS.gene053565:CDS
CTTGCTTGCTTTGGAGGTGC+TGG 0.298763 4.4:-21254670 MS.gene053565:CDS
AGAGCCATTATAACCAAATA+TGG 0.302708 4.4:-21254013 MS.gene053565:CDS
GCGTTTAAGCTTGTTGAAAA+AGG 0.303112 4.4:-21253488 MS.gene053565:CDS
GGCAGCTCCTTCCTCCAATA+TGG 0.308794 4.4:+21253517 None:intergenic
GGAAGGGATACGGAGGATTC+TGG 0.316368 4.4:-21255997 MS.gene053565:CDS
TTTGAATGAAGGAGATGTTT+TGG 0.321268 4.4:-21253699 MS.gene053565:CDS
TTACCGTTCATGACGATTGC+TGG 0.323580 4.4:+21254064 None:intergenic
GGAGAAAGAAATGAGCCTTC+TGG 0.329113 4.4:+21252936 None:intergenic
GAAAATGGAGGCATGCTTCC+AGG 0.332136 4.4:+21253545 None:intergenic
TCAAGAGGCTGGTCCTCATT+TGG 0.333478 4.4:+21254889 None:intergenic
AATCATGCACTTGCTTGCTT+TGG 0.334399 4.4:-21254679 MS.gene053565:CDS
AATTATGGCACCAGCAATTT+GGG 0.334837 4.4:+21255119 None:intergenic
AGAGGCCATCATGCAGAGAT+AGG 0.336023 4.4:-21253578 MS.gene053565:CDS
GGGACAAGTGCAGAAGTTTA+TGG 0.337450 4.4:-21253077 MS.gene053565:CDS
TGTATGAATAATCTTACATT+TGG 0.338339 4.4:-21252813 MS.gene053565:CDS
GTGCTCTATTTGATCCTAAC+GGG 0.339283 4.4:-21253811 MS.gene053565:CDS
GGCCCTGCTGGTGGAGTTGT+TGG 0.344548 4.4:-21255258 MS.gene053565:CDS
CCAGTGATTCTGCACAGATT+TGG 0.347200 4.4:-21252654 MS.gene053565:CDS
GAAACAGAAAAGCCATTGAT+TGG 0.347411 4.4:-21255210 MS.gene053565:CDS
GAAGAATTTGAGAAGCTTGC+TGG 0.352120 4.4:-21254850 MS.gene053565:CDS
ACAGATGCCAATCTTGTTCT+CGG 0.358530 4.4:-21254949 MS.gene053565:CDS
AGAGAGAGTTGAACTTGTTC+AGG 0.365487 4.4:-21255730 MS.gene053565:CDS
GAGGTGGTGATGGGCTTGTC+AGG 0.366399 4.4:-21252596 MS.gene053565:CDS
TCCTCTCAATCAAGGCTGTT+TGG 0.366985 4.4:-21252979 MS.gene053565:CDS
TATAATTGAAGGCTACTATA+AGG 0.368534 4.4:-21254164 MS.gene053565:CDS
GGCTTGTGGTCTCAATATAT+TGG 0.373119 4.4:+21254210 None:intergenic
ACTCCCAGAGGCAGGTTCTA+TGG 0.376389 4.4:+21254189 None:intergenic
CTGGAGCTTATTGAACAATA+TGG 0.378331 4.4:-21253314 MS.gene053565:CDS
AAATCACAATATTTCTGTTC+TGG 0.382104 4.4:+21254263 None:intergenic
TTACTGCATTCGCTGTTTAG+TGG 0.384236 4.4:-21253012 MS.gene053565:CDS
TATAAGGTTTACTTTGGAAA+TGG 0.385748 4.4:-21254148 MS.gene053565:CDS
GATAAGCGAAAGGTTTATCT+TGG 0.393132 4.4:-21252453 MS.gene053565:CDS
TACTAGACATTGCTCCTAGA+TGG 0.396011 4.4:+21253756 None:intergenic
CTGGTAATATAAATGCTTAT+CGG 0.397675 4.4:-21254831 MS.gene053565:CDS
CAAGAGGCTGGTCCTCATTT+GGG 0.398768 4.4:+21254890 None:intergenic
TTCAACGCTTCTTCATTAAG+AGG 0.400280 4.4:+21255627 None:intergenic
CCCGAAATACCTTTAACAAT+TGG 0.400832 4.4:+21255672 None:intergenic
GTTATTAAAGACTACTTGTC+AGG 0.405088 4.4:-21255393 MS.gene053565:CDS
CTGAGAAGATTGAGTGGATA+AGG 0.405278 4.4:-21255929 MS.gene053565:CDS
AGACAATGTGTCGTCCAATA+AGG 0.405869 4.4:-21254735 MS.gene053565:CDS
TATCTTTGTTCAAATATCTC+TGG 0.407146 4.4:+21252678 None:intergenic
GTTATAATGGCTCTACAATT+GGG 0.408132 4.4:+21254022 None:intergenic
GGAGGAAGGAGCTGCCATTA+AGG 0.412462 4.4:-21253510 MS.gene053565:CDS
GGCTACTATAAGGTTTACTT+TGG 0.413293 4.4:-21254154 MS.gene053565:CDS
GGAGAGGTTAGCTTTGAGTC+TGG 0.419943 4.4:-21255511 MS.gene053565:CDS
AATATGGATGGGAAATAATC+AGG 0.422047 4.4:+21254916 None:intergenic
TTCCACGGTCATCGGAGCTT+GGG 0.422905 4.4:+21253426 None:intergenic
GCAATTCTGTCTGGCCCTGC+TGG 0.425209 4.4:-21255270 MS.gene053565:CDS
GGATGGGGCTCTCCAGTGTA+AGG 0.427006 4.4:-21252366 None:intergenic
AAGCTGAGGTGCTTGAATTA+TGG 0.427501 4.4:+21255104 None:intergenic
CAACTTGAAAAGCACCGAAC+TGG 0.428297 4.4:+21255037 None:intergenic
TGCGCCAGAGAGTACCTTCT+CGG 0.429400 4.4:-21255301 MS.gene053565:CDS
AATGACAGCTGCAGCTGTTA+CGG 0.430567 4.4:+21253034 None:intergenic
GAGAGGTTAGCTTTGAGTCT+GGG 0.434107 4.4:-21255510 MS.gene053565:CDS
TCTCTATAAGCTTGAAAAGC+TGG 0.438165 4.4:-21254110 MS.gene053565:CDS
CAGGCTTGTGCTTGTTCGCA+AGG 0.438311 4.4:-21252837 MS.gene053565:CDS
ATTGGAGGTGGAAGTGGGGC+TGG 0.439024 4.4:-21252762 MS.gene053565:CDS
CCAAATCTGTGCAGAATCAC+TGG 0.440423 4.4:+21252654 None:intergenic
TTTCGATAACATACCGGACC+TGG 0.445254 4.4:+21254991 None:intergenic
CCATTGATTGGATTTGATAT+GGG 0.445828 4.4:-21255198 MS.gene053565:CDS
AAATCCCGGGCCATCGGAAT+GGG 0.449816 4.4:-21256073 MS.gene053565:CDS
ATTTGTGATGTTAGAGTTCG+TGG 0.451405 4.4:-21254244 MS.gene053565:CDS
GTTCCATAAACCGCAGCATA+AGG 0.453381 4.4:+21254523 None:intergenic
GCGCCAGAGAGTACCTTCTC+GGG 0.453858 4.4:-21255300 MS.gene053565:CDS
GAAACCATTGGAGGTGGAAG+TGG 0.456245 4.4:-21252768 MS.gene053565:CDS
CTCTATAAGCTTGAAAAGCT+GGG 0.456645 4.4:-21254109 MS.gene053565:CDS
GAAGATTGAGTGGATAAGGA+TGG 0.456909 4.4:-21255925 MS.gene053565:CDS
TTGTCAGGGAAATAGAGTTT+AGG 0.457091 4.4:-21252581 MS.gene053565:CDS
CTCTGTGACAATTGAAGAAG+AGG 0.458384 4.4:-21253180 MS.gene053565:CDS
CGTGAGGTGCATTTGCAACT+AGG 0.458939 4.4:+21253786 None:intergenic
AGTGATAGTGCAGCTGTAGT+AGG 0.459852 4.4:-21252912 MS.gene053565:CDS
GTGCTGGAAACCCAAATTGC+TGG 0.465569 4.4:-21255129 MS.gene053565:CDS
GACATAACCGAGAACAAGAT+TGG 0.466015 4.4:+21254942 None:intergenic
GACATAAACACTGTGGCTGC+TGG 0.467039 4.4:-21255081 MS.gene053565:CDS
AGAGATTGCACTTGGCTTTG+TGG 0.468839 4.4:-21254770 MS.gene053565:CDS
AGGATTCTGGAAGAGTTTAC+CGG 0.468997 4.4:-21255984 MS.gene053565:CDS
GTTCCACGGTCATCGGAGCT+TGG 0.470281 4.4:+21253425 None:intergenic
GTTTGTGAGCTTGTTTCAGC+AGG 0.470544 4.4:-21254302 MS.gene053565:CDS
AAGCTTGAAAAGCTGGGGTA+TGG 0.470631 4.4:-21254103 MS.gene053565:CDS
GGTGTAACAACAGTTATATC+AGG 0.473194 4.4:+21253641 None:intergenic
AAGCGCTTATGGAATGGGAT+TGG 0.475287 4.4:-21254572 MS.gene053565:CDS
GTGCATGATTCTTTGTCTCA+TGG 0.477254 4.4:+21254692 None:intergenic
GGGTATGGACATACGATGTC+TGG 0.477657 4.4:-21254088 MS.gene053565:CDS
CTTGTTGACTTGACATCAAG+AGG 0.478863 4.4:+21254874 None:intergenic
TTATCCTCAGCATGAACAAC+AGG 0.479218 4.4:-21255535 MS.gene053565:CDS
TTTCGTGATTTGCTTCAGAT+TGG 0.479339 4.4:-21255831 MS.gene053565:CDS
ATCATCTGCTTTGTCTCCCA+TGG 0.479739 4.4:-21255469 MS.gene053565:CDS
GAAGTGGGGCTGGTCCTACA+TGG 0.480601 4.4:-21252752 MS.gene053565:CDS
CAATCAAGGCTGTTTGGCTC+CGG 0.480823 4.4:-21252973 MS.gene053565:CDS
TGTGCTCTATTTGATCCTAA+CGG 0.483165 4.4:-21253812 MS.gene053565:CDS
CAAGTTGGACCAGAATCAGT+TGG 0.483970 4.4:-21255021 MS.gene053565:CDS
CAAATATACTCGGACGAGCC+TGG 0.483979 4.4:+21255805 None:intergenic
TATTTAAACTTGAGATATGA+AGG 0.484417 4.4:-21254394 MS.gene053565:CDS
ACTATCCCATTCCGATGGCC+CGG 0.487281 4.4:+21256068 None:intergenic
GATGTTAGAGTTCGTGGTAC+AGG 0.487747 4.4:-21254238 MS.gene053565:CDS
TTTGGGTACTATGAAACCAT+TGG 0.487807 4.4:-21252780 MS.gene053565:CDS
TGTGCTATAGCCAGGTCTCT+AGG 0.488977 4.4:-21254634 MS.gene053565:CDS
TTCTAGAGCGTAAGGGAGAA+AGG 0.489520 4.4:-21255878 MS.gene053565:CDS
AAGGCAGTTGACTGAAATGA+AGG 0.490413 4.4:-21254716 MS.gene053565:CDS
TTCCCTCCCTTCAGCCCTCT+AGG 0.492741 4.4:+21252513 None:intergenic
AAGCGAAAGGTTTATCTTGG+TGG 0.493349 4.4:-21252450 MS.gene053565:CDS
AAATGCTTATCGGAAGAATC+CGG 0.495419 4.4:-21254821 MS.gene053565:CDS
AAGAGGAATTTGTCTAGTCC+TGG 0.495664 4.4:-21253333 MS.gene053565:CDS
ATTCTGTCTGGCCCTGCTGG+TGG 0.498150 4.4:-21255267 MS.gene053565:CDS
ATTATAGGACTCCCAGAGGC+AGG 0.498589 4.4:+21254181 None:intergenic
TGATGTTTATGCTGAAATCC+CGG 0.498742 4.4:-21256087 MS.gene053565:CDS
AGCTTGTTTCAGCAGGAGTA+CGG 0.499459 4.4:-21254295 MS.gene053565:CDS
CCCATATCAAATCCAATCAA+TGG 0.501185 4.4:+21255198 None:intergenic
TGGAACGACAATTTGAATGA+AGG 0.501354 4.4:-21253710 MS.gene053565:CDS
AACATGCTTGTGCTATAGCC+AGG 0.502568 4.4:-21254642 MS.gene053565:CDS
CTTGTGCTTGCAAATCAGAT+AGG 0.503391 4.4:+21253369 None:intergenic
GTTGATATTCCTCTCAATCA+AGG 0.503412 4.4:-21252987 MS.gene053565:CDS
GAGGCCATCATGCAGAGATA+GGG 0.504769 4.4:-21253577 MS.gene053565:CDS
AATCTTAGTTCCACGGTCAT+CGG 0.504968 4.4:+21253418 None:intergenic
ACACTGCCATCATGGTCAAA+AGG 0.505366 4.4:-21254366 MS.gene053565:CDS
TTTGCTTCAGATTGGTAACC+AGG 0.505515 4.4:-21255823 MS.gene053565:CDS
TTCATTTCCAAATTTGAAGA+GGG 0.505645 4.4:-21255369 MS.gene053565:CDS
TCATTCTTGTATTTGTCATG+TGG 0.505719 4.4:+21252706 None:intergenic
TTGACTTGACATCAAGAGGC+TGG 0.505867 4.4:+21254878 None:intergenic
GGATTTCACAGAGGTGGTGA+TGG 0.506041 4.4:-21252606 MS.gene053565:CDS
AACACTGTGGCTGCTGGAGG+TGG 0.506217 4.4:-21255075 MS.gene053565:CDS
GACATTGCTCCTAGATGGAC+AGG 0.506372 4.4:+21253761 None:intergenic
ACAAAGTCAAGGATTTAAAG+AGG 0.508942 4.4:-21254437 MS.gene053565:CDS
GGGCACAAAGCAATTCTGTC+TGG 0.509203 4.4:-21255279 MS.gene053565:CDS
GAAATCCCGGGCCATCGGAA+TGG 0.511415 4.4:-21256074 MS.gene053565:CDS
CGGTGATTCTCTGAGATGTA+AGG 0.512758 4.4:+21252880 None:intergenic
CCTCACGTTCCTGTCCATCT+AGG 0.515620 4.4:-21253770 MS.gene053565:CDS
CATATTGTTCAATAAGCTCC+AGG 0.516323 4.4:+21253315 None:intergenic
CAATGCGCTTCTAGAGCGTA+AGG 0.517056 4.4:-21255886 MS.gene053565:CDS
TAACCAACAACTCCACCAGC+AGG 0.517791 4.4:+21255255 None:intergenic
TCAAAGTTAAAGTTCCAGTT+CGG 0.517821 4.4:-21255051 MS.gene053565:CDS
TACCGTTCATGACGATTGCT+GGG 0.519074 4.4:+21254065 None:intergenic
TCTGGGAGTCCTATAATTGA+AGG 0.520534 4.4:-21254175 MS.gene053565:CDS
ACGGATGTGAGTCGATATGC+TGG 0.520949 4.4:-21255165 MS.gene053565:CDS
GAAGAGGACTACATGGATGA+TGG 0.522320 4.4:-21253164 MS.gene053565:CDS
CAAGCCATAGAACCTGCCTC+TGG 0.522546 4.4:-21254193 MS.gene053565:CDS
GTTACTAACCATCCGTCAGC+CGG 0.522818 4.4:-21253677 MS.gene053565:CDS
CCTTCAGCCCTCTAGGTGCA+TGG 0.523628 4.4:+21252520 None:intergenic
AGCCCCACTTCCACCTCCAA+TGG 0.524577 4.4:+21252764 None:intergenic
AGTTGAACTTGTTCAGGCAA+AGG 0.525601 4.4:-21255724 MS.gene053565:CDS
AACTCGGTAGCATAGTCAAA+TGG 0.526369 4.4:+21254322 None:intergenic
ATCCATATTTGGCCCAAATG+AGG 0.527067 4.4:-21254902 MS.gene053565:CDS
TACTATGAAACCATTGGAGG+TGG 0.528174 4.4:-21252774 MS.gene053565:CDS
GCTTATTGAACAATATGGAC+TGG 0.528703 4.4:-21253309 MS.gene053565:CDS
AATTGAAGAAGAGGACTACA+TGG 0.529608 4.4:-21253171 MS.gene053565:CDS
ACCTCTTCATAAAGATTCGA+AGG 0.529988 4.4:+21255765 None:intergenic
AGTTGGAGCACACCCAGGTC+CGG 0.531279 4.4:-21255004 MS.gene053565:CDS
GGTCCGGTATGTTATCGAAA+AGG 0.531315 4.4:-21254988 MS.gene053565:CDS
CACCTAGAGGGCTGAAGGGA+GGG 0.534280 4.4:-21252515 MS.gene053565:CDS
ATGCTGAAATCCCGGGCCAT+CGG 0.536893 4.4:-21256079 MS.gene053565:CDS
AAGCAGAAGTTACAAAGTCA+AGG 0.538124 4.4:-21254448 MS.gene053565:CDS
AGGCACAGACACTGCCATCA+TGG 0.538294 4.4:-21254374 MS.gene053565:CDS
TTGGACTTAGAACGAACAGC+GGG 0.538396 4.4:-21252635 MS.gene053565:CDS
GATTTCACAGAGGTGGTGAT+GGG 0.538603 4.4:-21252605 MS.gene053565:CDS
ATGCACCGGTGGAAGGGATA+CGG 0.539409 4.4:-21256007 MS.gene053565:CDS
CGAGGAACAGCACGAACCAT+GGG 0.540481 4.4:+21255453 None:intergenic
CTATCCCATTCCGATGGCCC+GGG 0.540543 4.4:+21256069 None:intergenic
GCCTTCGAATCTTTATGAAG+AGG 0.540919 4.4:-21255766 MS.gene053565:CDS
CCATGCACCTAGAGGGCTGA+AGG 0.540944 4.4:-21252520 MS.gene053565:CDS
TTACTTTGGAAATGGTTGGC+AGG 0.541377 4.4:-21254140 MS.gene053565:CDS
TCATTTGGGCCAAATATGGA+TGG 0.541667 4.4:+21254904 None:intergenic
AAGATTGAGTGGATAAGGAT+GGG 0.542642 4.4:-21255924 MS.gene053565:CDS
GGCTACCTCCGGCTGACGGA+TGG 0.542999 4.4:+21253669 None:intergenic
TTCAGCATAAACATCAGTAA+AGG 0.544485 4.4:+21256094 None:intergenic
AAAGGTGTCTTTCAGGAAGA+GGG 0.544537 4.4:-21253470 MS.gene053565:CDS
CCACTGGTCCCTTCCCATGT+AGG 0.545880 4.4:+21252738 None:intergenic
CAACAGTTATATCAGGAAGA+TGG 0.546898 4.4:+21253648 None:intergenic
AAAAGGTGTCTTTCAGGAAG+AGG 0.548287 4.4:-21253471 MS.gene053565:CDS
ATCAGGAAGATGGCTACCTC+CGG 0.549418 4.4:+21253658 None:intergenic
AAAATCTGAAGAATTTCGCC+AGG 0.550546 4.4:+21252405 None:intergenic
GGGTACTATGAAACCATTGG+AGG 0.551228 4.4:-21252777 MS.gene053565:CDS
AAATGTTGTAGAAGAAGTGC+AGG 0.552707 4.4:-21254548 MS.gene053565:CDS
TCAAAGTCCATATTGGAGGA+AGG 0.552749 4.4:-21253524 MS.gene053565:CDS
GCCAAACAGCCTTGATTGAG+AGG 0.553303 4.4:+21252978 None:intergenic
ACGAGGAACAGCACGAACCA+TGG 0.553745 4.4:+21255452 None:intergenic
TATGGGTATAGCCGAGCAGA+TGG 0.554245 4.4:-21253894 MS.gene053565:CDS
TGGAACTGAATCTACTCTTG+AGG 0.555609 4.4:-21254506 MS.gene053565:CDS
CAAAGTCCTTCCCATCTGCT+CGG 0.555901 4.4:+21253883 None:intergenic
GGGCTGGTCCTACATGGGAA+GGG 0.556224 4.4:-21252746 MS.gene053565:CDS
TGCCCCGAGAAGGTACTCTC+TGG 0.557665 4.4:+21255297 None:intergenic
CTTACGCTCTAGAAGCGCAT+TGG 0.558424 4.4:+21255887 None:intergenic
AGGTTTACTTTGGAAATGGT+TGG 0.559740 4.4:-21254144 MS.gene053565:CDS
CTGAGCATTGACTCTAACAA+AGG 0.560006 4.4:-21253122 MS.gene053565:CDS
TCCACCTGTTGTTCATGCTG+AGG 0.560655 4.4:+21255531 None:intergenic
AATTGCTTTGTGCCCCGAGA+AGG 0.562467 4.4:+21255287 None:intergenic
TTATGAAGAGGTTGTTGAGG+TGG 0.562789 4.4:-21255754 MS.gene053565:CDS
AGGTGCATGGACACGTCTCT+CGG 0.564718 4.4:+21252533 None:intergenic
AAACCATTGGAGGTGGAAGT+GGG 0.565646 4.4:-21252767 MS.gene053565:CDS
TATGACGATGCACCGGTGGA+AGG 0.566956 4.4:-21256014 MS.gene053565:CDS
GGGGCTGGTCCTACATGGGA+AGG 0.568443 4.4:-21252747 MS.gene053565:CDS
CTACATGGGAAGGGACCAGT+GGG 0.568834 4.4:-21252737 MS.gene053565:CDS
TTTCGACAAATATCAAAGAA+CGG 0.571010 4.4:-21253847 MS.gene053565:CDS
ACAAGTAGTCTTTAATAACT+GGG 0.572251 4.4:+21255397 None:intergenic
ATGACGATGCACCGGTGGAA+GGG 0.572483 4.4:-21256013 MS.gene053565:CDS
ATCCTCCGTATCCCTTCCAC+CGG 0.572721 4.4:+21256002 None:intergenic
TTATCGAAAAGGTGGAGAGT+TGG 0.573316 4.4:-21254977 MS.gene053565:CDS
TGCTCTATTTGATCCTAACG+GGG 0.574195 4.4:-21253810 MS.gene053565:CDS
AGAGAGATGCTGAAGTCAGT+TGG 0.574222 4.4:-21253233 MS.gene053565:CDS
GACCGTGGAACTAAGATTCG+AGG 0.574552 4.4:-21253413 MS.gene053565:CDS
CTGAAACAAGCTCACAAACT+CGG 0.575242 4.4:+21254306 None:intergenic
GAGGCAGGTTCTATGGCTTG+TGG 0.576679 4.4:+21254196 None:intergenic
TTCGATAACATACCGGACCT+GGG 0.579479 4.4:+21254992 None:intergenic
TCTTTATGAAGAGGTTGTTG+AGG 0.579619 4.4:-21255757 MS.gene053565:CDS
GATGTTTATGCTGAAATCCC+GGG 0.582630 4.4:-21256086 MS.gene053565:CDS
AGGCCATCATGCAGAGATAG+GGG 0.585050 4.4:-21253576 MS.gene053565:CDS
ATTCATTTCCAAATTTGAAG+AGG 0.585876 4.4:-21255370 MS.gene053565:CDS
AAAGAATGCTGACGGTAACT+GGG 0.588860 4.4:+21252556 None:intergenic
TCCTCAGCATGAACAACAGG+TGG 0.592506 4.4:-21255532 MS.gene053565:CDS
AAGCCATAGAACCTGCCTCT+GGG 0.594140 4.4:-21254192 MS.gene053565:CDS
TTGATTGGATTTGATATGGG+AGG 0.595299 4.4:-21255195 MS.gene053565:CDS
CCTACATGGGAAGGGACCAG+TGG 0.595461 4.4:-21252738 MS.gene053565:CDS
ACGGTCGAAGAGATTGCACT+TGG 0.597036 4.4:-21254778 MS.gene053565:CDS
CTAAGATTCGAGGAACTCGC+AGG 0.598988 4.4:-21253403 MS.gene053565:CDS
CCGGTATGTTATCGAAAAGG+TGG 0.601821 4.4:-21254985 MS.gene053565:CDS
AGATGGCTACCTCCGGCTGA+CGG 0.602035 4.4:+21253665 None:intergenic
AAGTGGGGCTGGTCCTACAT+GGG 0.602084 4.4:-21252751 MS.gene053565:CDS
TCATTTCCAAATTTGAAGAG+GGG 0.604683 4.4:-21255368 MS.gene053565:CDS
TTCCTCGAATCTTAGTTCCA+CGG 0.604797 4.4:+21253411 None:intergenic
GTGAAGATTCATATTCCAGA+AGG 0.608129 4.4:-21252951 MS.gene053565:CDS
GGGCTGAAGGGAGGGAACGA+CGG 0.608888 4.4:-21252507 MS.gene053565:CDS
TCGTGGTCTAACAGCTAGTG+TGG 0.608912 4.4:-21255433 MS.gene053565:CDS
TTGTTTATGCAATCAGATGG+AGG 0.609273 4.4:-21255327 MS.gene053565:CDS
TCTGGAATATGAATCTTCAC+CGG 0.609366 4.4:+21252954 None:intergenic
AGCATGAACAACAGGTGGAG+AGG 0.609686 4.4:-21255527 MS.gene053565:CDS
TTCTTTCATACCTAGAGACC+TGG 0.610605 4.4:+21254624 None:intergenic
CGCCAGAGAGTACCTTCTCG+GGG 0.610608 4.4:-21255299 MS.gene053565:CDS
CATGTGGCACTGTACCCCAC+TGG 0.611948 4.4:+21252722 None:intergenic
CAAGTAGCAGCAAATCAAAG+AGG 0.612527 4.4:-21253350 MS.gene053565:CDS
GATAGTGCAGCTGTAGTAGG+AGG 0.613944 4.4:-21252909 MS.gene053565:CDS
TCTAAAGAAAGATAAGCGAA+AGG 0.615035 4.4:-21252463 MS.gene053565:CDS
AGCATATCGACTCACATCCG+TGG 0.615640 4.4:+21255167 None:intergenic
CATTTGGGCCAAATATGGAT+GGG 0.617702 4.4:+21254905 None:intergenic
CATGCACCTAGAGGGCTGAA+GGG 0.618479 4.4:-21252519 MS.gene053565:CDS
AAAAGAAAGAAACCTTACAC+TGG 0.619401 4.4:+21252354 None:intergenic
GGAGGGAACGACGGTGCACG+TGG 0.619913 4.4:-21252498 MS.gene053565:CDS
GGCCCAGCAATCGTCATGAA+CGG 0.621020 4.4:-21254067 MS.gene053565:CDS
CAATGTCTAGTACAGTTCGT+TGG 0.622161 4.4:-21253745 MS.gene053565:CDS
TACCTACTGAGAAGATTGAG+TGG 0.625069 4.4:-21255935 MS.gene053565:CDS
GCACCTAGAGGGCTGAAGGG+AGG 0.625206 4.4:-21252516 MS.gene053565:CDS
TACGTACAGATGAATGCAGA+AGG 0.626574 4.4:-21253263 MS.gene053565:CDS
GGTGCATCGTCATAGTTCAA+AGG 0.627398 4.4:+21256023 None:intergenic
TTTGAACTATGACGATGCAC+CGG 0.631396 4.4:-21256021 MS.gene053565:CDS
ATGGTTCGTGCTGTTCCTCG+TGG 0.632048 4.4:-21255450 MS.gene053565:CDS
AGGTGGTGATGGGCTTGTCA+GGG 0.632510 4.4:-21252595 MS.gene053565:CDS
AGGCAGTTGACTGAAATGAA+GGG 0.634201 4.4:-21254715 MS.gene053565:CDS
ATCCACTCAATCTTCTCAGT+AGG 0.635256 4.4:+21255933 None:intergenic
GACGTGTCCATGCACCTAGA+GGG 0.637050 4.4:-21252527 MS.gene053565:CDS
TCTATAAGCTTGAAAAGCTG+GGG 0.641557 4.4:-21254108 MS.gene053565:CDS
GGAGATGGATTTCACAGAGG+TGG 0.641841 4.4:-21252612 MS.gene053565:CDS
GCTATAGCACAAGCATGTTG+AGG 0.643988 4.4:+21254646 None:intergenic
AATATGGACTTTGAAAATGG+AGG 0.644843 4.4:+21253533 None:intergenic
ATGGGTATAGCCGAGCAGAT+GGG 0.645074 4.4:-21253893 MS.gene053565:CDS
GGACTTAGAACGAACAGCGG+GGG 0.645162 4.4:-21252633 MS.gene053565:CDS
GTATAGCCGAGCAGATGGGA+AGG 0.646472 4.4:-21253889 MS.gene053565:CDS
TGGAAGTTATGAGCAAGTGC+TGG 0.647503 4.4:-21255145 MS.gene053565:CDS
TGGTGGTAAGAATTCTGTTG+AGG 0.647616 4.4:-21252433 MS.gene053565:CDS
AAGGTGTCTTTCAGGAAGAG+GGG 0.647947 4.4:-21253469 MS.gene053565:CDS
AAATGCAGTAAATACAACAT+CGG 0.648438 4.4:+21252860 None:intergenic
ACTACAGCTGCACTATCACT+AGG 0.649872 4.4:+21252915 None:intergenic
TCAATACTATCCCATTCCGA+TGG 0.651354 4.4:+21256063 None:intergenic
GAATCAGTTGGAGCACACCC+AGG 0.651733 4.4:-21255009 MS.gene053565:CDS
ATTGCTGTGTGTGTGACTAG+AGG 0.653431 4.4:-21255855 MS.gene053565:CDS
GAAGGGAATTAGTTGTCTAG+CGG 0.655153 4.4:-21255580 MS.gene053565:CDS
TCCATCTGCAAAAGACATGA+CGG 0.657595 4.4:-21254797 MS.gene053565:CDS
ATAAACACTGTGGCTGCTGG+AGG 0.659055 4.4:-21255078 MS.gene053565:CDS
AGTGCAGGAGCCTTATGCTG+CGG 0.660386 4.4:-21254533 MS.gene053565:CDS
GATAAGGATGGGTACAACTG+TGG 0.660581 4.4:-21255913 MS.gene053565:CDS
AACCAACAACTCCACCAGCA+GGG 0.660602 4.4:+21255256 None:intergenic
AGACGTGTCCATGCACCTAG+AGG 0.661021 4.4:-21252528 MS.gene053565:CDS
AGGATGGGGAGTGTTACTGA+AGG 0.663620 4.4:-21256149 MS.gene053565:CDS
AACCATTGGAGGTGGAAGTG+GGG 0.667336 4.4:-21252766 MS.gene053565:CDS
GAACTATGACGATGCACCGG+TGG 0.670012 4.4:-21256018 MS.gene053565:CDS
ACAGTAAGATCAAATATACT+CGG 0.674153 4.4:+21255795 None:intergenic
ACAGTGTTTATGTCAAGCTG+AGG 0.678380 4.4:+21255090 None:intergenic
TCTCTCGGAAAGAATGCTGA+CGG 0.680258 4.4:+21252548 None:intergenic
TTCCCAAGCTCCGATGACCG+TGG 0.682301 4.4:-21253428 MS.gene053565:CDS
CAAGTAGTCTTTAATAACTG+GGG 0.682734 4.4:+21255398 None:intergenic
ACTAACCATCCGTCAGCCGG+AGG 0.686340 4.4:-21253674 MS.gene053565:CDS
AATGCGCTTCTAGAGCGTAA+GGG 0.686495 4.4:-21255885 MS.gene053565:CDS
GCTCTATTTGATCCTAACGG+GGG 0.687490 4.4:-21253809 MS.gene053565:CDS
GGCCATCATGCAGAGATAGG+GGG 0.689810 4.4:-21253575 MS.gene053565:CDS
TGATATGGGAGGTACATCCA+CGG 0.690353 4.4:-21255184 MS.gene053565:CDS
CCTAGATGGACAGGAACGTG+AGG 0.696615 4.4:+21253770 None:intergenic
CACCGGTGGAAGGGATACGG+AGG 0.701888 4.4:-21256004 MS.gene053565:CDS
TTCAATTATAGGACTCCCAG+AGG 0.708433 4.4:+21254177 None:intergenic
TTTGGACTTAGAACGAACAG+CGG 0.711970 4.4:-21252636 MS.gene053565:CDS
ACACTAGCTGTTAGACCACG+AGG 0.721601 4.4:+21255435 None:intergenic
TGGACTTAGAACGAACAGCG+GGG 0.730288 4.4:-21252634 MS.gene053565:CDS
TCAGCTTGACATAAACACTG+TGG 0.791196 4.4:-21255088 MS.gene053565:CDS
TACATGGGAAGGGACCAGTG+GGG 0.800679 4.4:-21252736 MS.gene053565:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTAAACTTGAGATATGA+AGG - chr4.4:21254120-21254139 MS.gene053565:CDS 20.0%
!! TGTATGAATAATCTTACATT+TGG - chr4.4:21255701-21255720 MS.gene053565:CDS 20.0%
!!! AATTTTGATGTTTCCATATT+TGG + chr4.4:21254517-21254536 None:intergenic 20.0%
!!! TTACACCTGTTTTTTTTAAT+GGG - chr4.4:21254889-21254908 MS.gene053565:CDS 20.0%
! AAATGCAGTAAATACAACAT+CGG + chr4.4:21255657-21255676 None:intergenic 25.0%
! AACTTCCCATTAAAAAAAAC+AGG + chr4.4:21254897-21254916 None:intergenic 25.0%
! ACAAGTAGTCTTTAATAACT+GGG + chr4.4:21253120-21253139 None:intergenic 25.0%
! ACAGTAAGATCAAATATACT+CGG + chr4.4:21252722-21252741 None:intergenic 25.0%
! ATTCATTTCCAAATTTGAAG+AGG - chr4.4:21253144-21253163 MS.gene053565:CDS 25.0%
! CTGGTAATATAAATGCTTAT+CGG - chr4.4:21253683-21253702 MS.gene053565:CDS 25.0%
! GTTTCCATATTTGGTTATAA+TGG + chr4.4:21254508-21254527 None:intergenic 25.0%
! TATAATTGAAGGCTACTATA+AGG - chr4.4:21254350-21254369 MS.gene053565:CDS 25.0%
! TATCTTTGTTCAAATATCTC+TGG + chr4.4:21255839-21255858 None:intergenic 25.0%
! TTATAGTAGCCTTCAATTAT+AGG + chr4.4:21254351-21254370 None:intergenic 25.0%
! TTCATTTCCAAATTTGAAGA+GGG - chr4.4:21253145-21253164 MS.gene053565:CDS 25.0%
! TTTCGACAAATATCAAAGAA+CGG - chr4.4:21254667-21254686 MS.gene053565:CDS 25.0%
!! AAATCACAATATTTCTGTTC+TGG + chr4.4:21254254-21254273 None:intergenic 25.0%
!! ATTTTCAATCACAGGTTTAT+GGG - chr4.4:21254603-21254622 MS.gene053565:CDS 25.0%
!! TATAAGGTTTACTTTGGAAA+TGG - chr4.4:21254366-21254385 MS.gene053565:CDS 25.0%
!! TATTTTCAATCACAGGTTTA+TGG - chr4.4:21254602-21254621 MS.gene053565:CDS 25.0%
!! TGCTTATTCACAAATTTTGT+GGG - chr4.4:21253914-21253933 MS.gene053565:CDS 25.0%
!!! AAGCAATTTTTGATTTTGGT+GGG - chr4.4:21255417-21255436 MS.gene053565:CDS 25.0%
!!! GTATTTTTTGTTGCAAATAG+AGG - chr4.4:21254918-21254937 MS.gene053565:CDS 25.0%
!!! GTTACACCTGTTTTTTTTAA+TGG - chr4.4:21254888-21254907 MS.gene053565:CDS 25.0%
!!! TGTTTTTTTTAATGGGAAGT+TGG - chr4.4:21254896-21254915 MS.gene053565:CDS 25.0%
AATATGGATGGGAAATAATC+AGG + chr4.4:21253601-21253620 None:intergenic 30.0%
ACAAAGTCAAGGATTTAAAG+AGG - chr4.4:21254077-21254096 MS.gene053565:CDS 30.0%
ACTGAAAAATTTACTGGAGA+AGG - chr4.4:21252916-21252935 MS.gene053565:CDS 30.0%
AGAGCCATTATAACCAAATA+TGG - chr4.4:21254501-21254520 MS.gene053565:CDS 30.0%
CAAGTAGTCTTTAATAACTG+GGG + chr4.4:21253119-21253138 None:intergenic 30.0%
CTGAAAAATTTACTGGAGAA+GGG - chr4.4:21252917-21252936 MS.gene053565:CDS 30.0%
GACAAGTAGTCTTTAATAAC+TGG + chr4.4:21253121-21253140 None:intergenic 30.0%
GATTATTTCCCATCCATATT+TGG - chr4.4:21253601-21253620 MS.gene053565:CDS 30.0%
GCTTGTACTGAAAAATTTAC+TGG - chr4.4:21252910-21252929 MS.gene053565:CDS 30.0%
GTTATTAAAGACTACTTGTC+AGG - chr4.4:21253121-21253140 MS.gene053565:CDS 30.0%
TCAAAGTTAAAGTTCCAGTT+CGG - chr4.4:21253463-21253482 MS.gene053565:CDS 30.0%
TCATTCTTGTATTTGTCATG+TGG + chr4.4:21255811-21255830 None:intergenic 30.0%
TCATTTCCAAATTTGAAGAG+GGG - chr4.4:21253146-21253165 MS.gene053565:CDS 30.0%
TCTAAAGAAAGATAAGCGAA+AGG - chr4.4:21256051-21256070 MS.gene053565:CDS 30.0%
TGTTGTATTTACTGCATTTC+AGG - chr4.4:21255658-21255677 MS.gene053565:CDS 30.0%
TTCAGCATAAACATCAGTAA+AGG + chr4.4:21252423-21252442 None:intergenic 30.0%
! AACTCTCTATTTTCAATCAC+AGG - chr4.4:21254595-21254614 MS.gene053565:CDS 30.0%
! AATATGGACTTTGAAAATGG+AGG + chr4.4:21254984-21255003 None:intergenic 30.0%
! ATTTTAAGCGCTTATGGAAT+GGG - chr4.4:21253937-21253956 MS.gene053565:CDS 30.0%
! ATTTTCAAAGTCCATATTGG+AGG - chr4.4:21254986-21255005 MS.gene053565:CDS 30.0%
! CCATTGATTGGATTTGATAT+GGG - chr4.4:21253316-21253335 MS.gene053565:CDS 30.0%
! GTGCTTATTCACAAATTTTG+TGG - chr4.4:21253913-21253932 MS.gene053565:CDS 30.0%
! GTTATAATGGCTCTACAATT+GGG + chr4.4:21254495-21254514 None:intergenic 30.0%
! TATTTTCCTTTTGACCATGA+TGG + chr4.4:21254157-21254176 None:intergenic 30.0%
! TCCAATATGGACTTTGAAAA+TGG + chr4.4:21254987-21255006 None:intergenic 30.0%
! TCCATTTTCAAAGTCCATAT+TGG - chr4.4:21254983-21255002 MS.gene053565:CDS 30.0%
! TTTGAATGAAGGAGATGTTT+TGG - chr4.4:21254815-21254834 MS.gene053565:CDS 30.0%
!! CCAATTGTTAAAGGTATTTC+GGG - chr4.4:21252842-21252861 MS.gene053565:CDS 30.0%
!! GCCAATTGTTAAAGGTATTT+CGG - chr4.4:21252841-21252860 MS.gene053565:CDS 30.0%
!! TTAAGATTTTGTATCGACAG+AGG - chr4.4:21252392-21252411 MS.gene053565:CDS 30.0%
!!! GAAGCAATTTTTGATTTTGG+TGG - chr4.4:21255416-21255435 MS.gene053565:CDS 30.0%
!!! GGAGAAGCAATTTTTGATTT+TGG - chr4.4:21255413-21255432 MS.gene053565:CDS 30.0%
!!! GTTTTGTTTATGCAATCAGA+TGG - chr4.4:21253184-21253203 MS.gene053565:CDS 30.0%
AAAATCTGAAGAATTTCGCC+AGG + chr4.4:21256112-21256131 None:intergenic 35.0%
AAATGCTTATCGGAAGAATC+CGG - chr4.4:21253693-21253712 MS.gene053565:CDS 35.0%
AACAAGCTTAAACGCCTTAA+TGG + chr4.4:21255021-21255040 None:intergenic 35.0%
AAGATTGAGTGGATAAGGAT+GGG - chr4.4:21252590-21252609 MS.gene053565:CDS 35.0%
AAGCAGAAGTTACAAAGTCA+AGG - chr4.4:21254066-21254085 MS.gene053565:CDS 35.0%
AATTATGGCACCAGCAATTT+GGG + chr4.4:21253398-21253417 None:intergenic 35.0%
AATTGAAGAAGAGGACTACA+TGG - chr4.4:21255343-21255362 MS.gene053565:CDS 35.0%
ACCTCTTCATAAAGATTCGA+AGG + chr4.4:21252752-21252771 None:intergenic 35.0%
ATTTCAGTCAACTGCCTTAT+TGG + chr4.4:21253796-21253815 None:intergenic 35.0%
ATTTGTGATGTTAGAGTTCG+TGG - chr4.4:21254270-21254289 MS.gene053565:CDS 35.0%
CAACAGTTATATCAGGAAGA+TGG + chr4.4:21254869-21254888 None:intergenic 35.0%
CATATTGTTCAATAAGCTCC+AGG + chr4.4:21255202-21255221 None:intergenic 35.0%
CCCATATCAAATCCAATCAA+TGG + chr4.4:21253319-21253338 None:intergenic 35.0%
CCCGAAATACCTTTAACAAT+TGG + chr4.4:21252845-21252864 None:intergenic 35.0%
CTCTATAAGCTTGAAAAGCT+GGG - chr4.4:21254405-21254424 MS.gene053565:CDS 35.0%
CTGGAGCTTATTGAACAATA+TGG - chr4.4:21255200-21255219 MS.gene053565:CDS 35.0%
GAAACAGAAAAGCCATTGAT+TGG - chr4.4:21253304-21253323 MS.gene053565:CDS 35.0%
GATAAGCGAAAGGTTTATCT+TGG - chr4.4:21256061-21256080 MS.gene053565:CDS 35.0%
GCTTATTGAACAATATGGAC+TGG - chr4.4:21255205-21255224 MS.gene053565:CDS 35.0%
GGCTACTATAAGGTTTACTT+TGG - chr4.4:21254360-21254379 MS.gene053565:CDS 35.0%
GGTGTAACAACAGTTATATC+AGG + chr4.4:21254876-21254895 None:intergenic 35.0%
GTGAAGATTCATATTCCAGA+AGG - chr4.4:21255563-21255582 MS.gene053565:CDS 35.0%
GTGCAGAAGTTTATGGTAAT+TGG - chr4.4:21255444-21255463 MS.gene053565:CDS 35.0%
GTTGATATTCCTCTCAATCA+AGG - chr4.4:21255527-21255546 MS.gene053565:CDS 35.0%
TCTATAAGCTTGAAAAGCTG+GGG - chr4.4:21254406-21254425 MS.gene053565:CDS 35.0%
TCTCTATAAGCTTGAAAAGC+TGG - chr4.4:21254404-21254423 MS.gene053565:CDS 35.0%
TCTTTATGAAGAGGTTGTTG+AGG - chr4.4:21252757-21252776 MS.gene053565:CDS 35.0%
TGATGTTTATGCTGAAATCC+CGG - chr4.4:21252427-21252446 MS.gene053565:CDS 35.0%
TGGAACGACAATTTGAATGA+AGG - chr4.4:21254804-21254823 MS.gene053565:CDS 35.0%
TGTGCTCTATTTGATCCTAA+CGG - chr4.4:21254702-21254721 MS.gene053565:CDS 35.0%
TTCAACGCTTCTTCATTAAG+AGG + chr4.4:21252890-21252909 None:intergenic 35.0%
TTGATTGGATTTGATATGGG+AGG - chr4.4:21253319-21253338 MS.gene053565:CDS 35.0%
TTGTCAGGGAAATAGAGTTT+AGG - chr4.4:21255933-21255952 MS.gene053565:CDS 35.0%
TTGTTTATGCAATCAGATGG+AGG - chr4.4:21253187-21253206 MS.gene053565:CDS 35.0%
TTTGGGTACTATGAAACCAT+TGG - chr4.4:21255734-21255753 MS.gene053565:CDS 35.0%
! AAATGTTGTAGAAGAAGTGC+AGG - chr4.4:21253966-21253985 MS.gene053565:CDS 35.0%
! ACATTTGGAGATGACACTTT+TGG - chr4.4:21255716-21255735 MS.gene053565:CDS 35.0%
! AGGTTTACTTTGGAAATGGT+TGG - chr4.4:21254370-21254389 MS.gene053565:CDS 35.0%
! CATTTGGAGATGACACTTTT+GGG - chr4.4:21255717-21255736 MS.gene053565:CDS 35.0%
! GATTTTAAGCGCTTATGGAA+TGG - chr4.4:21253936-21253955 MS.gene053565:CDS 35.0%
! GCCATTGATTGGATTTGATA+TGG - chr4.4:21253315-21253334 MS.gene053565:CDS 35.0%
! GGTTACTCACAAACTCTTTT+TGG - chr4.4:21253277-21253296 MS.gene053565:CDS 35.0%
! GGTTATAATGGCTCTACAAT+TGG + chr4.4:21254496-21254515 None:intergenic 35.0%
! TCTGGAATATGAATCTTCAC+CGG + chr4.4:21255563-21255582 None:intergenic 35.0%
!! AGCTTTTCAAGCTTATAGAG+AGG + chr4.4:21254405-21254424 None:intergenic 35.0%
!! GCGTTTAAGCTTGTTGAAAA+AGG - chr4.4:21255026-21255045 MS.gene053565:CDS 35.0%
!! TGTTGAAAAAGGTGTCTTTC+AGG - chr4.4:21255037-21255056 MS.gene053565:CDS 35.0%
!! TTTCGTGATTTGCTTCAGAT+TGG - chr4.4:21252683-21252702 MS.gene053565:CDS 35.0%
!!! ATTCTTCAGATTTTGACTCC+TGG - chr4.4:21256118-21256137 MS.gene053565:CDS 35.0%
!!! GATATTTTAATGCTGCTCAC+AGG + chr4.4:21254552-21254571 None:intergenic 35.0%
!!! TTCTTCAGATTTTGACTCCT+GGG - chr4.4:21256119-21256138 MS.gene053565:CDS 35.0%
AAAGAATGCTGACGGTAACT+GGG + chr4.4:21255961-21255980 None:intergenic 40.0%
AACTCGGTAGCATAGTCAAA+TGG + chr4.4:21254195-21254214 None:intergenic 40.0%
AAGAGGAATTTGTCTAGTCC+TGG - chr4.4:21255181-21255200 MS.gene053565:CDS 40.0%
AAGCGAAAGGTTTATCTTGG+TGG - chr4.4:21256064-21256083 MS.gene053565:CDS 40.0%
AAGGCAGTTGACTGAAATGA+AGG - chr4.4:21253798-21253817 MS.gene053565:CDS 40.0%
AATCATGCACTTGCTTGCTT+TGG - chr4.4:21253835-21253854 MS.gene053565:CDS 40.0%
AATCTTAGTTCCACGGTCAT+CGG + chr4.4:21255099-21255118 None:intergenic 40.0%
ACAGATGCCAATCTTGTTCT+CGG - chr4.4:21253565-21253584 MS.gene053565:CDS 40.0%
ACAGTGTTTATGTCAAGCTG+AGG + chr4.4:21253427-21253446 None:intergenic 40.0%
AGACAATGTGTCGTCCAATA+AGG - chr4.4:21253779-21253798 MS.gene053565:CDS 40.0%
AGGCAGTTGACTGAAATGAA+GGG - chr4.4:21253799-21253818 MS.gene053565:CDS 40.0%
ATCCACTCAATCTTCTCAGT+AGG + chr4.4:21252584-21252603 None:intergenic 40.0%
ATCCATATTTGGCCCAAATG+AGG - chr4.4:21253612-21253631 MS.gene053565:CDS 40.0%
CAAGTAGCAGCAAATCAAAG+AGG - chr4.4:21255164-21255183 MS.gene053565:CDS 40.0%
CAATGTCTAGTACAGTTCGT+TGG - chr4.4:21254769-21254788 MS.gene053565:CDS 40.0%
CATTTGGGCCAAATATGGAT+GGG + chr4.4:21253612-21253631 None:intergenic 40.0%
CTCTGTGACAATTGAAGAAG+AGG - chr4.4:21255334-21255353 MS.gene053565:CDS 40.0%
CTGAAACAAGCTCACAAACT+CGG + chr4.4:21254211-21254230 None:intergenic 40.0%
CTGAGAAGATTGAGTGGATA+AGG - chr4.4:21252585-21252604 MS.gene053565:CDS 40.0%
CTTGTGCTTGCAAATCAGAT+AGG + chr4.4:21255148-21255167 None:intergenic 40.0%
GAAGAATTTGAGAAGCTTGC+TGG - chr4.4:21253664-21253683 MS.gene053565:CDS 40.0%
GAAGATTGAGTGGATAAGGA+TGG - chr4.4:21252589-21252608 MS.gene053565:CDS 40.0%
GAAGGGAATTAGTTGTCTAG+CGG - chr4.4:21252934-21252953 MS.gene053565:CDS 40.0%
GAATTATGGCACCAGCAATT+TGG + chr4.4:21253399-21253418 None:intergenic 40.0%
GACATAACCGAGAACAAGAT+TGG + chr4.4:21253575-21253594 None:intergenic 40.0%
GATGTTTATGCTGAAATCCC+GGG - chr4.4:21252428-21252447 MS.gene053565:CDS 40.0%
GCCTTCGAATCTTTATGAAG+AGG - chr4.4:21252748-21252767 MS.gene053565:CDS 40.0%
GCTTCTTCGCCAATTGTTAA+AGG - chr4.4:21252833-21252852 MS.gene053565:CDS 40.0%
GGCTTGTGGTCTCAATATAT+TGG + chr4.4:21254307-21254326 None:intergenic 40.0%
GTGCATGATTCTTTGTCTCA+TGG + chr4.4:21253825-21253844 None:intergenic 40.0%
GTGCTCTATTTGATCCTAAC+GGG - chr4.4:21254703-21254722 MS.gene053565:CDS 40.0%
TACCTACTGAGAAGATTGAG+TGG - chr4.4:21252579-21252598 MS.gene053565:CDS 40.0%
TACGTACAGATGAATGCAGA+AGG - chr4.4:21255251-21255270 MS.gene053565:CDS 40.0%
TACTAGACATTGCTCCTAGA+TGG + chr4.4:21254761-21254780 None:intergenic 40.0%
TACTATGAAACCATTGGAGG+TGG - chr4.4:21255740-21255759 MS.gene053565:CDS 40.0%
TCAAAGTCCATATTGGAGGA+AGG - chr4.4:21254990-21255009 MS.gene053565:CDS 40.0%
TCAATACTATCCCATTCCGA+TGG + chr4.4:21252454-21252473 None:intergenic 40.0%
TCAGCTTGACATAAACACTG+TGG - chr4.4:21253426-21253445 MS.gene053565:CDS 40.0%
TCATTTGGGCCAAATATGGA+TGG + chr4.4:21253613-21253632 None:intergenic 40.0%
TCCATCTGCAAAAGACATGA+CGG - chr4.4:21253717-21253736 MS.gene053565:CDS 40.0%
TCTGGGAGTCCTATAATTGA+AGG - chr4.4:21254339-21254358 MS.gene053565:CDS 40.0%
TGCTCTATTTGATCCTAACG+GGG - chr4.4:21254704-21254723 MS.gene053565:CDS 40.0%
TGGAACTGAATCTACTCTTG+AGG - chr4.4:21254008-21254027 MS.gene053565:CDS 40.0%
TGGTGGTAAGAATTCTGTTG+AGG - chr4.4:21256081-21256100 MS.gene053565:CDS 40.0%
TTACTGCATTCGCTGTTTAG+TGG - chr4.4:21255502-21255521 MS.gene053565:CDS 40.0%
TTATCCTCAGCATGAACAAC+AGG - chr4.4:21252979-21252998 MS.gene053565:CDS 40.0%
TTATCGAAAAGGTGGAGAGT+TGG - chr4.4:21253537-21253556 MS.gene053565:CDS 40.0%
TTATGAAGAGGTTGTTGAGG+TGG - chr4.4:21252760-21252779 MS.gene053565:CDS 40.0%
TTCAATTATAGGACTCCCAG+AGG + chr4.4:21254340-21254359 None:intergenic 40.0%
TTCCTCGAATCTTAGTTCCA+CGG + chr4.4:21255106-21255125 None:intergenic 40.0%
TTCGTTGGCAACTCAATTAC+TGG - chr4.4:21254784-21254803 MS.gene053565:CDS 40.0%
TTCTTTCATACCTAGAGACC+TGG + chr4.4:21253893-21253912 None:intergenic 40.0%
TTTGAACTATGACGATGCAC+CGG - chr4.4:21252493-21252512 MS.gene053565:CDS 40.0%
TTTGGACTTAGAACGAACAG+CGG - chr4.4:21255878-21255897 MS.gene053565:CDS 40.0%
! AAGCTGAGGTGCTTGAATTA+TGG + chr4.4:21253413-21253432 None:intergenic 40.0%
! AGAGAGAGTTGAACTTGTTC+AGG - chr4.4:21252784-21252803 MS.gene053565:CDS 40.0%
! AGGATTCTGGAAGAGTTTAC+CGG - chr4.4:21252530-21252549 MS.gene053565:CDS 40.0%
! AGTTGAACTTGTTCAGGCAA+AGG - chr4.4:21252790-21252809 MS.gene053565:CDS 40.0%
! ATGTCTTTTGCAGATGGATC+CGG + chr4.4:21253715-21253734 None:intergenic 40.0%
! CCACCTTTTCGATAACATAC+CGG + chr4.4:21253532-21253551 None:intergenic 40.0%
! TGTGGGATTTTAAGCGCTTA+TGG - chr4.4:21253931-21253950 MS.gene053565:CDS 40.0%
! TTACTTTGGAAATGGTTGGC+AGG - chr4.4:21254374-21254393 MS.gene053565:CDS 40.0%
! TTTGCTTCAGATTGGTAACC+AGG - chr4.4:21252691-21252710 MS.gene053565:CDS 40.0%
!! AAAAGGTGTCTTTCAGGAAG+AGG - chr4.4:21255043-21255062 MS.gene053565:CDS 40.0%
!! AAAGGTGTCTTTCAGGAAGA+GGG - chr4.4:21255044-21255063 MS.gene053565:CDS 40.0%
!! AGATTTTGTATCGACAGAGG+CGG - chr4.4:21252395-21252414 MS.gene053565:CDS 40.0%
!! CTGAGCATTGACTCTAACAA+AGG - chr4.4:21255392-21255411 MS.gene053565:CDS 40.0%
!! CTTGTTGACTTGACATCAAG+AGG + chr4.4:21253643-21253662 None:intergenic 40.0%
!!! TCTTCAGATTTTGACTCCTG+GGG - chr4.4:21256120-21256139 MS.gene053565:CDS 40.0%
AAACCATTGGAGGTGGAAGT+GGG - chr4.4:21255747-21255766 MS.gene053565:CDS 45.0%
AACATGCTTGTGCTATAGCC+AGG - chr4.4:21253872-21253891 MS.gene053565:CDS 45.0%
AAGCGCTTATGGAATGGGAT+TGG - chr4.4:21253942-21253961 MS.gene053565:CDS 45.0%
AAGCTTGAAAAGCTGGGGTA+TGG - chr4.4:21254411-21254430 MS.gene053565:CDS 45.0%
AATGACAGCTGCAGCTGTTA+CGG + chr4.4:21255483-21255502 None:intergenic 45.0%
ACACTGCCATCATGGTCAAA+AGG - chr4.4:21254148-21254167 MS.gene053565:CDS 45.0%
ACTACAGCTGCACTATCACT+AGG + chr4.4:21255602-21255621 None:intergenic 45.0%
AGAGAGATGCTGAAGTCAGT+TGG - chr4.4:21255281-21255300 MS.gene053565:CDS 45.0%
ATCATCTGCTTTGTCTCCCA+TGG - chr4.4:21253045-21253064 MS.gene053565:CDS 45.0%
ATTGCTGTGTGTGTGACTAG+AGG - chr4.4:21252659-21252678 MS.gene053565:CDS 45.0%
CCAAATCTGTGCAGAATCAC+TGG + chr4.4:21255863-21255882 None:intergenic 45.0%
CCAGTGATTCTGCACAGATT+TGG - chr4.4:21255860-21255879 MS.gene053565:CDS 45.0%
CCGGTATGTTATCGAAAAGG+TGG - chr4.4:21253529-21253548 MS.gene053565:CDS 45.0%
GAAAGAATGCTGACGGTAAC+TGG + chr4.4:21255962-21255981 None:intergenic 45.0%
GAAGAGGACTACATGGATGA+TGG - chr4.4:21255350-21255369 MS.gene053565:CDS 45.0%
GATAAGGATGGGTACAACTG+TGG - chr4.4:21252601-21252620 MS.gene053565:CDS 45.0%
GATGTTAGAGTTCGTGGTAC+AGG - chr4.4:21254276-21254295 MS.gene053565:CDS 45.0%
GATTTCACAGAGGTGGTGAT+GGG - chr4.4:21255909-21255928 MS.gene053565:CDS 45.0%
GCTAAGCCCCTCTTCAAATT+TGG + chr4.4:21253155-21253174 None:intergenic 45.0%
GCTATAGCACAAGCATGTTG+AGG + chr4.4:21253871-21253890 None:intergenic 45.0%
GCTCTATTTGATCCTAACGG+GGG - chr4.4:21254705-21254724 MS.gene053565:CDS 45.0%
GGAGAAAGAAATGAGCCTTC+TGG + chr4.4:21255581-21255600 None:intergenic 45.0%
GGGACAAGTGCAGAAGTTTA+TGG - chr4.4:21255437-21255456 MS.gene053565:CDS 45.0%
GGGTACTATGAAACCATTGG+AGG - chr4.4:21255737-21255756 MS.gene053565:CDS 45.0%
GGTCCGGTATGTTATCGAAA+AGG - chr4.4:21253526-21253545 MS.gene053565:CDS 45.0%
GGTGCATCGTCATAGTTCAA+AGG + chr4.4:21252494-21252513 None:intergenic 45.0%
GTCCTCATTTGGGCCAAATA+TGG + chr4.4:21253617-21253636 None:intergenic 45.0%
GTTCCATAAACCGCAGCATA+AGG + chr4.4:21253994-21254013 None:intergenic 45.0%
TACCGTTCATGACGATTGCT+GGG + chr4.4:21254452-21254471 None:intergenic 45.0%
TCCTCTCAATCAAGGCTGTT+TGG - chr4.4:21255535-21255554 MS.gene053565:CDS 45.0%
TCTCTCGGAAAGAATGCTGA+CGG + chr4.4:21255969-21255988 None:intergenic 45.0%
TGGAAGTTATGAGCAAGTGC+TGG - chr4.4:21253369-21253388 MS.gene053565:CDS 45.0%
TTACCGTTCATGACGATTGC+TGG + chr4.4:21254453-21254472 None:intergenic 45.0%
TTCGATAACATACCGGACCT+GGG + chr4.4:21253525-21253544 None:intergenic 45.0%
TTGGACTTAGAACGAACAGC+GGG - chr4.4:21255879-21255898 MS.gene053565:CDS 45.0%
TTTCGATAACATACCGGACC+TGG + chr4.4:21253526-21253545 None:intergenic 45.0%
! AAGGTGTCTTTCAGGAAGAG+GGG - chr4.4:21255045-21255064 MS.gene053565:CDS 45.0%
! AATTCTGTTGAGGTGCTTCC+TGG - chr4.4:21256091-21256110 MS.gene053565:CDS 45.0%
! ACCGTCATGTCTTTTGCAGA+TGG + chr4.4:21253721-21253740 None:intergenic 45.0%
! AGCTTGTTTCAGCAGGAGTA+CGG - chr4.4:21254219-21254238 MS.gene053565:CDS 45.0%
! AGTGATAGTGCAGCTGTAGT+AGG - chr4.4:21255602-21255621 MS.gene053565:CDS 45.0%
! CAAGTTGGACCAGAATCAGT+TGG - chr4.4:21253493-21253512 MS.gene053565:CDS 45.0%
! GTTTGTGAGCTTGTTTCAGC+AGG - chr4.4:21254212-21254231 MS.gene053565:CDS 45.0%
! TGATATGGGAGGTACATCCA+CGG - chr4.4:21253330-21253349 MS.gene053565:CDS 45.0%
! TTGACTTGACATCAAGAGGC+TGG + chr4.4:21253639-21253658 None:intergenic 45.0%
!! AATGCGCTTCTAGAGCGTAA+GGG - chr4.4:21252629-21252648 MS.gene053565:CDS 45.0%
!! AGAGATTGCACTTGGCTTTG+TGG - chr4.4:21253744-21253763 MS.gene053565:CDS 45.0%
!! CAACTTGAAAAGCACCGAAC+TGG + chr4.4:21253480-21253499 None:intergenic 45.0%
!! CGGTGATTCTCTGAGATGTA+AGG + chr4.4:21255637-21255656 None:intergenic 45.0%
!! GAGAGGTTAGCTTTGAGTCT+GGG - chr4.4:21253004-21253023 MS.gene053565:CDS 45.0%
!! GTAGGTATTTTCGAGCTACG+CGG + chr4.4:21252566-21252585 None:intergenic 45.0%
!! TTCTAGAGCGTAAGGGAGAA+AGG - chr4.4:21252636-21252655 MS.gene053565:CDS 45.0%
!!! CAGTTCGGTGCTTTTCAAGT+TGG - chr4.4:21253478-21253497 MS.gene053565:CDS 45.0%
!!! CTTCAGATTTTGACTCCTGG+GGG - chr4.4:21256121-21256140 MS.gene053565:CDS 45.0%
AACCAACAACTCCACCAGCA+GGG + chr4.4:21253261-21253280 None:intergenic 50.0%
AACCATTGGAGGTGGAAGTG+GGG - chr4.4:21255748-21255767 MS.gene053565:CDS 50.0%
AAGCCATAGAACCTGCCTCT+GGG - chr4.4:21254322-21254341 MS.gene053565:CDS 50.0%
AATTGCTTTGTGCCCCGAGA+AGG + chr4.4:21253230-21253249 None:intergenic 50.0%
ACACTAGCTGTTAGACCACG+AGG + chr4.4:21253082-21253101 None:intergenic 50.0%
ACGGATGTGAGTCGATATGC+TGG - chr4.4:21253349-21253368 MS.gene053565:CDS 50.0%
ACGGTCGAAGAGATTGCACT+TGG - chr4.4:21253736-21253755 MS.gene053565:CDS 50.0%
AGAGGCCATCATGCAGAGAT+AGG - chr4.4:21254936-21254955 MS.gene053565:CDS 50.0%
AGCATGAACAACAGGTGGAG+AGG - chr4.4:21252987-21253006 MS.gene053565:CDS 50.0%
AGGCCATCATGCAGAGATAG+GGG - chr4.4:21254938-21254957 MS.gene053565:CDS 50.0%
ATAAACACTGTGGCTGCTGG+AGG - chr4.4:21253436-21253455 MS.gene053565:CDS 50.0%
ATCAGGAAGATGGCTACCTC+CGG + chr4.4:21254859-21254878 None:intergenic 50.0%
ATGGGTATAGCCGAGCAGAT+GGG - chr4.4:21254621-21254640 MS.gene053565:CDS 50.0%
ATTATAGGACTCCCAGAGGC+AGG + chr4.4:21254336-21254355 None:intergenic 50.0%
CAAAGTCCTTCCCATCTGCT+CGG + chr4.4:21254634-21254653 None:intergenic 50.0%
CAAATATACTCGGACGAGCC+TGG + chr4.4:21252712-21252731 None:intergenic 50.0%
CATGCACTTGCTTGCTTTGG+AGG - chr4.4:21253838-21253857 MS.gene053565:CDS 50.0%
CGTGAGGTGCATTTGCAACT+AGG + chr4.4:21254731-21254750 None:intergenic 50.0%
CTAAGATTCGAGGAACTCGC+AGG - chr4.4:21255111-21255130 MS.gene053565:CDS 50.0%
GAAACCATTGGAGGTGGAAG+TGG - chr4.4:21255746-21255765 MS.gene053565:CDS 50.0%
GACATAAACACTGTGGCTGC+TGG - chr4.4:21253433-21253452 MS.gene053565:CDS 50.0%
GACATTGCTCCTAGATGGAC+AGG + chr4.4:21254756-21254775 None:intergenic 50.0%
GACCGTGGAACTAAGATTCG+AGG - chr4.4:21255101-21255120 MS.gene053565:CDS 50.0%
GAGGCCATCATGCAGAGATA+GGG - chr4.4:21254937-21254956 MS.gene053565:CDS 50.0%
GATAGTGCAGCTGTAGTAGG+AGG - chr4.4:21255605-21255624 MS.gene053565:CDS 50.0%
GCCAAACAGCCTTGATTGAG+AGG + chr4.4:21255539-21255558 None:intergenic 50.0%
GGATTTCACAGAGGTGGTGA+TGG - chr4.4:21255908-21255927 MS.gene053565:CDS 50.0%
GGGCACAAAGCAATTCTGTC+TGG - chr4.4:21253235-21253254 MS.gene053565:CDS 50.0%
GGGTATGGACATACGATGTC+TGG - chr4.4:21254426-21254445 MS.gene053565:CDS 50.0%
GTGCTGGAAACCCAAATTGC+TGG - chr4.4:21253385-21253404 MS.gene053565:CDS 50.0%
GTTACTAACCATCCGTCAGC+CGG - chr4.4:21254837-21254856 MS.gene053565:CDS 50.0%
TAACCAACAACTCCACCAGC+AGG + chr4.4:21253262-21253281 None:intergenic 50.0%
TACCCCCTATCTCTGCATGA+TGG + chr4.4:21254944-21254963 None:intergenic 50.0%
TATGGGTATAGCCGAGCAGA+TGG - chr4.4:21254620-21254639 MS.gene053565:CDS 50.0%
TCCACCTGTTGTTCATGCTG+AGG + chr4.4:21252986-21253005 None:intergenic 50.0%
TCCTCAGCATGAACAACAGG+TGG - chr4.4:21252982-21253001 MS.gene053565:CDS 50.0%
TCGTGGTCTAACAGCTAGTG+TGG - chr4.4:21253081-21253100 MS.gene053565:CDS 50.0%
TGGACTTAGAACGAACAGCG+GGG - chr4.4:21255880-21255899 MS.gene053565:CDS 50.0%
TGTGCTATAGCCAGGTCTCT+AGG - chr4.4:21253880-21253899 MS.gene053565:CDS 50.0%
! CAAGAGGCTGGTCCTCATTT+GGG + chr4.4:21253627-21253646 None:intergenic 50.0%
! CAATCAAGGCTGTTTGGCTC+CGG - chr4.4:21255541-21255560 MS.gene053565:CDS 50.0%
! GAAAATGGAGGCATGCTTCC+AGG + chr4.4:21254972-21254991 None:intergenic 50.0%
! GAGCCTTATGCTGCGGTTTA+TGG - chr4.4:21253988-21254007 MS.gene053565:CDS 50.0%
! GCTACGCGGAATTTTCTCAC+CGG + chr4.4:21252552-21252571 None:intergenic 50.0%
! GGAGATGGATTTCACAGAGG+TGG - chr4.4:21255902-21255921 MS.gene053565:CDS 50.0%
! TCAAGAGGCTGGTCCTCATT+TGG + chr4.4:21253628-21253647 None:intergenic 50.0%
!! AGCATATCGACTCACATCCG+TGG + chr4.4:21253350-21253369 None:intergenic 50.0%
!! CAATGCGCTTCTAGAGCGTA+AGG - chr4.4:21252628-21252647 MS.gene053565:CDS 50.0%
!! CTTACGCTCTAGAAGCGCAT+TGG + chr4.4:21252630-21252649 None:intergenic 50.0%
!! GAGATAGGGGGTATTACTCC+TGG - chr4.4:21254951-21254970 MS.gene053565:CDS 50.0%
!! GGAGAGGTTAGCTTTGAGTC+TGG - chr4.4:21253003-21253022 MS.gene053565:CDS 50.0%
AAATCCCGGGCCATCGGAAT+GGG - chr4.4:21252441-21252460 MS.gene053565:CDS 55.0%
ACGAGGAACAGCACGAACCA+TGG + chr4.4:21253065-21253084 None:intergenic 55.0%
ACTATCCCATTCCGATGGCC+CGG + chr4.4:21252449-21252468 None:intergenic 55.0%
ACTCCCAGAGGCAGGTTCTA+TGG + chr4.4:21254328-21254347 None:intergenic 55.0%
AGACGTGTCCATGCACCTAG+AGG - chr4.4:21255986-21256005 MS.gene053565:CDS 55.0%
AGGCACAGACACTGCCATCA+TGG - chr4.4:21254140-21254159 MS.gene053565:CDS 55.0%
AGGTGCATGGACACGTCTCT+CGG + chr4.4:21255984-21256003 None:intergenic 55.0%
ATCCTCCGTATCCCTTCCAC+CGG + chr4.4:21252515-21252534 None:intergenic 55.0%
ATGCTGAAATCCCGGGCCAT+CGG - chr4.4:21252435-21252454 MS.gene053565:CDS 55.0%
CAAGCCATAGAACCTGCCTC+TGG - chr4.4:21254321-21254340 MS.gene053565:CDS 55.0%
CAGGCTTGTGCTTGTTCGCA+AGG - chr4.4:21255677-21255696 MS.gene053565:CDS 55.0%
CATGCACCTAGAGGGCTGAA+GGG - chr4.4:21255995-21256014 MS.gene053565:CDS 55.0%
CCTAGATGGACAGGAACGTG+AGG + chr4.4:21254747-21254766 None:intergenic 55.0%
CCTCACGTTCCTGTCCATCT+AGG - chr4.4:21254744-21254763 MS.gene053565:CDS 55.0%
CGAGGAACAGCACGAACCAT+GGG + chr4.4:21253064-21253083 None:intergenic 55.0%
CTACATGGGAAGGGACCAGT+GGG - chr4.4:21255777-21255796 MS.gene053565:CDS 55.0%
GAACTATGACGATGCACCGG+TGG - chr4.4:21252496-21252515 MS.gene053565:CDS 55.0%
GAATCAGTTGGAGCACACCC+AGG - chr4.4:21253505-21253524 MS.gene053565:CDS 55.0%
GACGTGTCCATGCACCTAGA+GGG - chr4.4:21255987-21256006 MS.gene053565:CDS 55.0%
GAGGCAGGTTCTATGGCTTG+TGG + chr4.4:21254321-21254340 None:intergenic 55.0%
GGAAGGGATACGGAGGATTC+TGG - chr4.4:21252517-21252536 MS.gene053565:CDS 55.0%
GGACTTAGAACGAACAGCGG+GGG - chr4.4:21255881-21255900 MS.gene053565:CDS 55.0%
GGAGGAAGGAGCTGCCATTA+AGG - chr4.4:21255004-21255023 MS.gene053565:CDS 55.0%
GGCAGCTCCTTCCTCCAATA+TGG + chr4.4:21255000-21255019 None:intergenic 55.0%
GGCCATCATGCAGAGATAGG+GGG - chr4.4:21254939-21254958 MS.gene053565:CDS 55.0%
GGCCCAGCAATCGTCATGAA+CGG - chr4.4:21254447-21254466 MS.gene053565:CDS 55.0%
GTATAGCCGAGCAGATGGGA+AGG - chr4.4:21254625-21254644 MS.gene053565:CDS 55.0%
TACATGGGAAGGGACCAGTG+GGG - chr4.4:21255778-21255797 MS.gene053565:CDS 55.0%
TTCCACGGTCATCGGAGCTT+GGG + chr4.4:21255091-21255110 None:intergenic 55.0%
TTTGCAACTAGGCCCCCGTT+AGG + chr4.4:21254720-21254739 None:intergenic 55.0%
! AGTGCAGGAGCCTTATGCTG+CGG - chr4.4:21253981-21254000 MS.gene053565:CDS 55.0%
! ATGACGATGCACCGGTGGAA+GGG - chr4.4:21252501-21252520 MS.gene053565:CDS 55.0%
! ATGCACCGGTGGAAGGGATA+CGG - chr4.4:21252507-21252526 MS.gene053565:CDS 55.0%
! ATGGTTCGTGCTGTTCCTCG+TGG - chr4.4:21253064-21253083 MS.gene053565:CDS 55.0%
! GGGGGAGATGGATTTCACAG+AGG - chr4.4:21255899-21255918 MS.gene053565:CDS 55.0%
! GGGTGTGCTCCAACTGATTC+TGG + chr4.4:21253505-21253524 None:intergenic 55.0%
! TATGACGATGCACCGGTGGA+AGG - chr4.4:21252500-21252519 MS.gene053565:CDS 55.0%
!! AAGTGGGGCTGGTCCTACAT+GGG - chr4.4:21255763-21255782 MS.gene053565:CDS 55.0%
!! AGGTGGTGATGGGCTTGTCA+GGG - chr4.4:21255919-21255938 MS.gene053565:CDS 55.0%
!! CTTGCTTGCTTTGGAGGTGC+TGG - chr4.4:21253844-21253863 MS.gene053565:CDS 55.0%
!! TGCGCCAGAGAGTACCTTCT+CGG - chr4.4:21253213-21253232 MS.gene053565:CDS 55.0%
!!! ATTTTGACTCCTGGGGGTGG+TGG - chr4.4:21256127-21256146 MS.gene053565:CDS 55.0%
!!! CAGATTTTGACTCCTGGGGG+TGG - chr4.4:21256124-21256143 MS.gene053565:CDS 55.0%
AACACTGTGGCTGCTGGAGG+TGG - chr4.4:21253439-21253458 MS.gene053565:CDS 60.0%
ACTAACCATCCGTCAGCCGG+AGG - chr4.4:21254840-21254859 MS.gene053565:CDS 60.0%
AGAACGAACAGCGGGGGAGA+TGG - chr4.4:21255887-21255906 MS.gene053565:CDS 60.0%
AGATGGCTACCTCCGGCTGA+CGG + chr4.4:21254852-21254871 None:intergenic 60.0%
AGCCCCACTTCCACCTCCAA+TGG + chr4.4:21255753-21255772 None:intergenic 60.0%
AGTTGGAGCACACCCAGGTC+CGG - chr4.4:21253510-21253529 MS.gene053565:CDS 60.0%
ATTCTGTCTGGCCCTGCTGG+TGG - chr4.4:21253247-21253266 MS.gene053565:CDS 60.0%
ATTGGAGGTGGAAGTGGGGC+TGG - chr4.4:21255752-21255771 MS.gene053565:CDS 60.0%
CACCTAGAGGGCTGAAGGGA+GGG - chr4.4:21255999-21256018 MS.gene053565:CDS 60.0%
CATGTGGCACTGTACCCCAC+TGG + chr4.4:21255795-21255814 None:intergenic 60.0%
CCACTGGTCCCTTCCCATGT+AGG + chr4.4:21255779-21255798 None:intergenic 60.0%
CCATGCACCTAGAGGGCTGA+AGG - chr4.4:21255994-21256013 MS.gene053565:CDS 60.0%
CCTACATGGGAAGGGACCAG+TGG - chr4.4:21255776-21255795 MS.gene053565:CDS 60.0%
CCTTCAGCCCTCTAGGTGCA+TGG + chr4.4:21255997-21256016 None:intergenic 60.0%
CTATCCCATTCCGATGGCCC+GGG + chr4.4:21252448-21252467 None:intergenic 60.0%
GAAATCCCGGGCCATCGGAA+TGG - chr4.4:21252440-21252459 MS.gene053565:CDS 60.0%
GCAATTCTGTCTGGCCCTGC+TGG - chr4.4:21253244-21253263 MS.gene053565:CDS 60.0%
GCTGCAGCTGTTACGGCTTC+TGG + chr4.4:21255476-21255495 None:intergenic 60.0%
GTTCCACGGTCATCGGAGCT+TGG + chr4.4:21255092-21255111 None:intergenic 60.0%
TTCCCAAGCTCCGATGACCG+TGG - chr4.4:21255086-21255105 MS.gene053565:CDS 60.0%
TTCCCTCCCTTCAGCCCTCT+AGG + chr4.4:21256004-21256023 None:intergenic 60.0%
!! CGCCAGAGAGTACCTTCTCG+GGG - chr4.4:21253215-21253234 MS.gene053565:CDS 60.0%
!! GAAGTGGGGCTGGTCCTACA+TGG - chr4.4:21255762-21255781 MS.gene053565:CDS 60.0%
!! GAGGTGGTGATGGGCTTGTC+AGG - chr4.4:21255918-21255937 MS.gene053565:CDS 60.0%
!! GCGCCAGAGAGTACCTTCTC+GGG - chr4.4:21253214-21253233 MS.gene053565:CDS 60.0%
!! GGGCTGGTCCTACATGGGAA+GGG - chr4.4:21255768-21255787 MS.gene053565:CDS 60.0%
!! TGCCCCGAGAAGGTACTCTC+TGG + chr4.4:21253220-21253239 None:intergenic 60.0%
CACCGGTGGAAGGGATACGG+AGG - chr4.4:21252510-21252529 MS.gene053565:CDS 65.0%
GCACCTAGAGGGCTGAAGGG+AGG - chr4.4:21255998-21256017 MS.gene053565:CDS 65.0%
GGCCCTGCTGGTGGAGTTGT+TGG - chr4.4:21253256-21253275 MS.gene053565:CDS 65.0%
GGGCTGAAGGGAGGGAACGA+CGG - chr4.4:21256007-21256026 MS.gene053565:CDS 65.0%
!! ACTCCTGGGGGTGGTGGATG+GGG - chr4.4:21256133-21256152 MS.gene053565:CDS 65.0%
!! GACTCCTGGGGGTGGTGGAT+GGG - chr4.4:21256132-21256151 MS.gene053565:CDS 65.0%
!! GGGGCTGGTCCTACATGGGA+AGG - chr4.4:21255767-21255786 MS.gene053565:CDS 65.0%
!! TGACTCCTGGGGGTGGTGGA+TGG - chr4.4:21256131-21256150 MS.gene053565:CDS 65.0%
GGAGGGAACGACGGTGCACG+TGG - chr4.4:21256016-21256035 MS.gene053565:CDS 70.0%
GGCTACCTCCGGCTGACGGA+TGG + chr4.4:21254848-21254867 None:intergenic 70.0%
GAGCCCCATCCACCACCCCC+AGG + chr4.4:21256139-21256158 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 21252368 21256168 21252368 ID=MS.gene053565
chr4.4 mRNA 21252368 21256168 21252368 ID=MS.gene053565.t1;Parent=MS.gene053565
chr4.4 exon 21252368 21256168 21252368 ID=MS.gene053565.t1.exon1;Parent=MS.gene053565.t1
chr4.4 CDS 21252368 21256168 21252368 ID=cds.MS.gene053565.t1;Parent=MS.gene053565.t1
Gene Sequence

>MS.gene053565

ATGGGGAGTGTTACTGAAGGAAAGTTAAGATTTTGTATCGACAGAGGCGGTACCTTTACTGATGTTTATGCTGAAATCCCGGGCCATCGGAATGGGATAGTATTGAAGCTTTTGTCAGTTGATCCTTTGAACTATGACGATGCACCGGTGGAAGGGATACGGAGGATTCTGGAAGAGTTTACCGGTGAGAAAATTCCGCGTAGCTCGAAAATACCTACTGAGAAGATTGAGTGGATAAGGATGGGTACAACTGTGGCAACCAATGCGCTTCTAGAGCGTAAGGGAGAAAGGATTGCTGTGTGTGTGACTAGAGGCTTTCGTGATTTGCTTCAGATTGGTAACCAGGCTCGTCCGAGTATATTTGATCTTACTGTGTCAAAGCCTTCGAATCTTTATGAAGAGGTTGTTGAGGTGGAAGAGAGAGTTGAACTTGTTCAGGCAAAGGAAGAAGAAGAAAGTCTGAGTGCTTCTTCGCCAATTGTTAAAGGTATTTCGGGAGAGCTTGTTAAGATTGTAAAGCCTCTTAATGAAGAAGCGTTGAAGCTTGTACTGAAAAATTTACTGGAGAAGGGAATTAGTTGTCTAGCGGTTGTTTTGATGCACTCGTACACTTATCCTCAGCATGAACAACAGGTGGAGAGGTTAGCTTTGAGTCTGGGATTTAAACATGTTTCGATATCATCTGCTTTGTCTCCCATGGTTCGTGCTGTTCCTCGTGGTCTAACAGCTAGTGTGGATGCTTATTTGACCCCAGTTATTAAAGACTACTTGTCAGGATTCATTTCCAAATTTGAAGAGGGGCTTAGCAAGTTGAATGTTTTGTTTATGCAATCAGATGGAGGACTTGCGCCAGAGAGTACCTTCTCGGGGCACAAAGCAATTCTGTCTGGCCCTGCTGGTGGAGTTGTTGGTTACTCACAAACTCTTTTTGGTCTTGAAACAGAAAAGCCATTGATTGGATTTGATATGGGAGGTACATCCACGGATGTGAGTCGATATGCTGGAAGTTATGAGCAAGTGCTGGAAACCCAAATTGCTGGTGCCATAATTCAAGCACCTCAGCTTGACATAAACACTGTGGCTGCTGGAGGTGGTTCAAAGTTAAAGTTCCAGTTCGGTGCTTTTCAAGTTGGACCAGAATCAGTTGGAGCACACCCAGGTCCGGTATGTTATCGAAAAGGTGGAGAGTTGGCAATTACAGATGCCAATCTTGTTCTCGGTTATGTCATTCCTGATTATTTCCCATCCATATTTGGCCCAAATGAGGACCAGCCTCTTGATGTCAAGTCAACAAGAGAAGAATTTGAGAAGCTTGCTGGTAATATAAATGCTTATCGGAAGAATCCGGATCCATCTGCAAAAGACATGACGGTCGAAGAGATTGCACTTGGCTTTGTGGATGTTGCTAATGAGACAATGTGTCGTCCAATAAGGCAGTTGACTGAAATGAAGGGCCATGAGACAAAGAATCATGCACTTGCTTGCTTTGGAGGTGCTGGACCTCAACATGCTTGTGCTATAGCCAGGTCTCTAGGTATGAAAGAAGTGCTTATTCACAAATTTTGTGGGATTTTAAGCGCTTATGGAATGGGATTGGCAAATGTTGTAGAAGAAGTGCAGGAGCCTTATGCTGCGGTTTATGGAACTGAATCTACTCTTGAGGCTTCACAACGAGAAGCTCTGTTACTGAAACAAGTTAAGCAGAAGTTACAAAGTCAAGGATTTAAAGAGGAAAATATTTCAACAGACACATATTTAAACTTGAGATATGAAGGCACAGACACTGCCATCATGGTCAAAAGGAAAATAGTTAAAGATGAAATACCATTTGACTATGCTACCGAGTTTGTGAGCTTGTTTCAGCAGGAGTACGGTTTTAAACTCCAGAACAGAAATATTGTGATTTGTGATGTTAGAGTTCGTGGTACAGGAGTTACCAATATATTGAGACCACAAGCCATAGAACCTGCCTCTGGGAGTCCTATAATTGAAGGCTACTATAAGGTTTACTTTGGAAATGGTTGGCAGGAAGCACCTCTCTATAAGCTTGAAAAGCTGGGGTATGGACATACGATGTCTGGCCCAGCAATCGTCATGAACGGTAATAGCACTGTGATTGTAGAACCCAATTGTAGAGCCATTATAACCAAATATGGAAACATCAAAATTGAAATTGATTCACCTGTGAGCAGCATTAAAATATCAGATAAAGTTGCAGATGTTGTACAACTCTCTATTTTCAATCACAGGTTTATGGGTATAGCCGAGCAGATGGGAAGGACTTTGCAAAGAACTTCAATTTCGACAAATATCAAAGAACGGCTTGATTTTTCTTGTGCTCTATTTGATCCTAACGGGGGCCTAGTTGCAAATGCACCTCACGTTCCTGTCCATCTAGGAGCAATGTCTAGTACAGTTCGTTGGCAACTCAATTACTGGAACGACAATTTGAATGAAGGAGATGTTTTGGTTACTAACCATCCGTCAGCCGGAGGTAGCCATCTTCCTGATATAACTGTTGTTACACCTGTTTTTTTTAATGGGAAGTTGGTATTTTTTGTTGCAAATAGAGGCCATCATGCAGAGATAGGGGGTATTACTCCTGGAAGCATGCCTCCATTTTCAAAGTCCATATTGGAGGAAGGAGCTGCCATTAAGGCGTTTAAGCTTGTTGAAAAAGGTGTCTTTCAGGAAGAGGGGATTGTTAAACTTTTACAGTTCCCAAGCTCCGATGACCGTGGAACTAAGATTCGAGGAACTCGCAGGATTCAAGATAACCTATCTGATTTGCAAGCACAAGTAGCAGCAAATCAAAGAGGAATTTGTCTAGTCCTGGAGCTTATTGAACAATATGGACTGGAAACTGTTCAAGCTTACATGAATTACGTACAGATGAATGCAGAAGGAGCAGTAAGAGAGATGCTGAAGTCAGTTGGTCGTAGAATTTCATCTGAGTCAAATGAAAACTCTGTGACAATTGAAGAAGAGGACTACATGGATGATGGATCTGTTATTCATTTGAAACTGAGCATTGACTCTAACAAAGGAGAAGCAATTTTTGATTTTGGTGGGACAAGTGCAGAAGTTTATGGTAATTGGAATGCACCAGAAGCCGTAACAGCTGCAGCTGTCATTTACTGCATTCGCTGTTTAGTGGATGTTGATATTCCTCTCAATCAAGGCTGTTTGGCTCCGGTGAAGATTCATATTCCAGAAGGCTCATTTCTTTCTCCTAGTGATAGTGCAGCTGTAGTAGGAGGCAATGTCCTTACATCTCAGAGAATCACCGATGTTGTATTTACTGCATTTCAGGCTTGTGCTTGTTCGCAAGGTTGTATGAATAATCTTACATTTGGAGATGACACTTTTGGGTACTATGAAACCATTGGAGGTGGAAGTGGGGCTGGTCCTACATGGGAAGGGACCAGTGGGGTACAGTGCCACATGACAAATACAAGAATGACTGATCCAGAGATATTTGAACAAAGATATCCAGTGATTCTGCACAGATTTGGACTTAGAACGAACAGCGGGGGAGATGGATTTCACAGAGGTGGTGATGGGCTTGTCAGGGAAATAGAGTTTAGGCGCCCAGTTACCGTCAGCATTCTTTCCGAGAGACGTGTCCATGCACCTAGAGGGCTGAAGGGAGGGAACGACGGTGCACGTGGTGCTAATTACATTCTAAAGAAAGATAAGCGAAAGGTTTATCTTGGTGGTAAGAATTCTGTTGAGGTGCTTCCTGGCGAAATTCTTCAGATTTTGACTCCTGGGGGTGGTGGATGGGGCTCTCCAGTGTAA

Protein sequence

>MS.gene053565.t1

MGSVTEGKLRFCIDRGGTFTDVYAEIPGHRNGIVLKLLSVDPLNYDDAPVEGIRRILEEFTGEKIPRSSKIPTEKIEWIRMGTTVATNALLERKGERIAVCVTRGFRDLLQIGNQARPSIFDLTVSKPSNLYEEVVEVEERVELVQAKEEEESLSASSPIVKGISGELVKIVKPLNEEALKLVLKNLLEKGISCLAVVLMHSYTYPQHEQQVERLALSLGFKHVSISSALSPMVRAVPRGLTASVDAYLTPVIKDYLSGFISKFEEGLSKLNVLFMQSDGGLAPESTFSGHKAILSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYAGSYEQVLETQIAGAIIQAPQLDINTVAAGGGSKLKFQFGAFQVGPESVGAHPGPVCYRKGGELAITDANLVLGYVIPDYFPSIFGPNEDQPLDVKSTREEFEKLAGNINAYRKNPDPSAKDMTVEEIALGFVDVANETMCRPIRQLTEMKGHETKNHALACFGGAGPQHACAIARSLGMKEVLIHKFCGILSAYGMGLANVVEEVQEPYAAVYGTESTLEASQREALLLKQVKQKLQSQGFKEENISTDTYLNLRYEGTDTAIMVKRKIVKDEIPFDYATEFVSLFQQEYGFKLQNRNIVICDVRVRGTGVTNILRPQAIEPASGSPIIEGYYKVYFGNGWQEAPLYKLEKLGYGHTMSGPAIVMNGNSTVIVEPNCRAIITKYGNIKIEIDSPVSSIKISDKVADVVQLSIFNHRFMGIAEQMGRTLQRTSISTNIKERLDFSCALFDPNGGLVANAPHVPVHLGAMSSTVRWQLNYWNDNLNEGDVLVTNHPSAGGSHLPDITVVTPVFFNGKLVFFVANRGHHAEIGGITPGSMPPFSKSILEEGAAIKAFKLVEKGVFQEEGIVKLLQFPSSDDRGTKIRGTRRIQDNLSDLQAQVAANQRGICLVLELIEQYGLETVQAYMNYVQMNAEGAVREMLKSVGRRISSESNENSVTIEEEDYMDDGSVIHLKLSIDSNKGEAIFDFGGTSAEVYGNWNAPEAVTAAAVIYCIRCLVDVDIPLNQGCLAPVKIHIPEGSFLSPSDSAAVVGGNVLTSQRITDVVFTAFQACACSQGCMNNLTFGDDTFGYYETIGGGSGAGPTWEGTSGVQCHMTNTRMTDPEIFEQRYPVILHRFGLRTNSGGDGFHRGGDGLVREIEFRRPVTVSILSERRVHAPRGLKGGNDGARGANYILKKDKRKVYLGGKNSVEVLPGEILQILTPGGGGWGSPV