Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29733.t1 | XP_003616764.1 | 96.4 | 391 | 14 | 0 | 1 | 391 | 1 | 391 | 1.40E-211 | 745.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29733.t1 | P49572 | 70.7 | 352 | 101 | 2 | 41 | 390 | 49 | 400 | 1.4e-140 | 500.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29733.t1 | G7KH34 | 96.4 | 391 | 14 | 0 | 1 | 391 | 1 | 391 | 1.0e-211 | 745.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061224 | MS.gene29733 | 0.813128 | 2.99E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29733.t1 | MTR_5g084030 | 96.419 | 391 | 14 | 0 | 1 | 391 | 1 | 391 | 0.0 | 767 |
| MS.gene29733.t1 | MTR_5g084030 | 96.606 | 383 | 13 | 0 | 9 | 391 | 10 | 392 | 0.0 | 756 |
| MS.gene29733.t1 | MTR_5g084030 | 97.384 | 344 | 9 | 0 | 48 | 391 | 11 | 354 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29733.t1 | AT5G48220 | 72.966 | 381 | 94 | 4 | 10 | 390 | 7 | 378 | 0.0 | 568 |
| MS.gene29733.t1 | AT5G48220 | 78.994 | 338 | 70 | 1 | 53 | 390 | 27 | 363 | 0.0 | 565 |
| MS.gene29733.t1 | AT5G48220 | 81.270 | 315 | 59 | 0 | 76 | 390 | 1 | 315 | 0.0 | 549 |
| MS.gene29733.t1 | AT5G48220 | 81.270 | 315 | 59 | 0 | 76 | 390 | 1 | 315 | 0.0 | 549 |
| MS.gene29733.t1 | AT2G04400 | 70.739 | 352 | 101 | 2 | 41 | 390 | 49 | 400 | 0.0 | 516 |
Find 93 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGAAGCTTTGAAAATT+TGG | 0.126121 | 5.3:-68101350 | MS.gene29733:intron |
| GTTTAGATGGTTGGGGAATC+TGG | 0.247392 | 5.3:-68100277 | MS.gene29733:intron |
| TTCTCCTTATTCTTATACCT+TGG | 0.277135 | 5.3:+68103792 | None:intergenic |
| GTAAAACAGCAGCAATTAAA+AGG | 0.309423 | 5.3:+68101122 | None:intergenic |
| AGGGAATTCGATCGTGTTCT+TGG | 0.315417 | 5.3:-68100606 | MS.gene29733:CDS |
| AGTTGGAGGAATAGTGGTTC+TGG | 0.317340 | 5.3:+68104562 | None:intergenic |
| CTACCCAAGGTATAAGAATA+AGG | 0.335290 | 5.3:-68103796 | MS.gene29733:CDS |
| TGAAAATGCACCTCCTGTTC+GGG | 0.336397 | 5.3:-68103518 | MS.gene29733:CDS |
| ATGGTTATGTTTAGATGGTT+GGG | 0.336646 | 5.3:-68100285 | MS.gene29733:intron |
| AAAGGTCCTACATAATGATT+AGG | 0.338327 | 5.3:+68103752 | None:intergenic |
| TTGAAAATGCACCTCCTGTT+CGG | 0.344054 | 5.3:-68103519 | MS.gene29733:CDS |
| AGATTGCTAATTCCCTTTCC+AGG | 0.344807 | 5.3:+68099823 | None:intergenic |
| AGAAAGAAAACCCCTTCTTA+TGG | 0.363149 | 5.3:-68103554 | MS.gene29733:CDS |
| AGGAATAGTGGTTCTGGGAT+TGG | 0.374224 | 5.3:+68104568 | None:intergenic |
| TGTACATAAGCAATGTCTTC+AGG | 0.374331 | 5.3:+68100244 | None:intergenic |
| TCTCCTTATTCTTATACCTT+GGG | 0.386336 | 5.3:+68103793 | None:intergenic |
| TATTTCCCTCGTTCTGCAAC+CGG | 0.387527 | 5.3:+68103723 | None:intergenic |
| TATGGTTATGTTTAGATGGT+TGG | 0.396274 | 5.3:-68100286 | MS.gene29733:intron |
| AAGGGAATTAGCAATCTCTT+TGG | 0.397539 | 5.3:-68099817 | MS.gene29733:CDS |
| GTTGGAGGAATAGTGGTTCT+GGG | 0.405718 | 5.3:+68104563 | None:intergenic |
| AAGGTCCTACATAATGATTA+GGG | 0.406698 | 5.3:+68103753 | None:intergenic |
| GGCATCAACAATCGTAATCT+TGG | 0.408935 | 5.3:-68100561 | MS.gene29733:intron |
| TAATGAACGAACTGGATTGC+CGG | 0.416704 | 5.3:-68103470 | MS.gene29733:CDS |
| TTGGAGTTAATAAGAAATGC+TGG | 0.428736 | 5.3:-68101331 | MS.gene29733:CDS |
| GACTTGAGTTGGAGGAATAG+TGG | 0.436368 | 5.3:+68104556 | None:intergenic |
| CGATCGTGTTCTTGGAATAG+AGG | 0.438551 | 5.3:-68100598 | MS.gene29733:CDS |
| GTTACCCTTGAGAGAAATCA+AGG | 0.441183 | 5.3:+68104616 | None:intergenic |
| GAAAACCCCTTCTTATGGTT+AGG | 0.442937 | 5.3:-68103549 | MS.gene29733:CDS |
| ACCACGAAGAAGCTTCTTGA+AGG | 0.446760 | 5.3:-68100422 | MS.gene29733:CDS |
| TCCTTCAAGAAGCTTCTTCG+TGG | 0.451429 | 5.3:+68100421 | None:intergenic |
| ATTGTAGCCGAACCTTCATT+AGG | 0.459178 | 5.3:+68103899 | None:intergenic |
| AATAAGAAATGCTGGAGTAA+AGG | 0.463960 | 5.3:-68101323 | MS.gene29733:intron |
| GTTAAGATATGCAAATTACT+TGG | 0.466429 | 5.3:-68101076 | MS.gene29733:CDS |
| GATATGCAAATTACTTGGAC+TGG | 0.466507 | 5.3:-68101071 | MS.gene29733:CDS |
| CTATAAGTATTGACTTGAGT+TGG | 0.466810 | 5.3:+68104545 | None:intergenic |
| GGTTGAAGCACTCAAAGTTA+AGG | 0.468677 | 5.3:-68103855 | MS.gene29733:CDS |
| TCTCTCAAGATGCCTCTACT+TGG | 0.471626 | 5.3:+68103418 | None:intergenic |
| AGTAGGAATGTTTCATAATG+AGG | 0.474718 | 5.3:-68103825 | MS.gene29733:CDS |
| GGCAGAGCCTAATGAAGGTT+CGG | 0.479822 | 5.3:-68103906 | MS.gene29733:CDS |
| AGGGCGGCTAATGAACGAAC+TGG | 0.483524 | 5.3:-68103478 | MS.gene29733:CDS |
| TTCTGCAACCGGAATTGAAA+AGG | 0.484408 | 5.3:+68103734 | None:intergenic |
| GCCCCAATAAAATCCCGAAC+AGG | 0.484947 | 5.3:+68103505 | None:intergenic |
| TGAATTCTTTGCACAACAAA+GGG | 0.485742 | 5.3:+68101197 | None:intergenic |
| ATTGTGAAACAAAGTGATCC+TGG | 0.486316 | 5.3:-68099841 | MS.gene29733:CDS |
| GGAATCCTTGATTTCTCTCA+AGG | 0.486941 | 5.3:-68104621 | MS.gene29733:CDS |
| ATAGAGGGCGTTGAGCTCAT+TGG | 0.489453 | 5.3:-68100582 | MS.gene29733:CDS |
| AAATACACCACGTAACATCT+TGG | 0.493800 | 5.3:-68103705 | MS.gene29733:CDS |
| AATGAACGAACTGGATTGCC+GGG | 0.495625 | 5.3:-68103469 | MS.gene29733:CDS |
| AAGCACTCAAAGTTAAGGAA+TGG | 0.501917 | 5.3:-68103850 | MS.gene29733:CDS |
| TGGTTATGTTTAGATGGTTG+GGG | 0.503041 | 5.3:-68100284 | MS.gene29733:intron |
| GATTAGGCAGAGCCTAATGA+AGG | 0.506962 | 5.3:-68103911 | MS.gene29733:intron |
| ATTGCTCAATCTTATGAGAA+AGG | 0.508235 | 5.3:-68101552 | MS.gene29733:CDS |
| ATAAGGAGAAGACCACCAAC+TGG | 0.508374 | 5.3:-68103779 | MS.gene29733:CDS |
| ATGAATTCTTTGCACAACAA+AGG | 0.510154 | 5.3:+68101196 | None:intergenic |
| AGCACTCAAAGTTAAGGAAT+GGG | 0.512586 | 5.3:-68103849 | MS.gene29733:CDS |
| TCGGCTACAATAGCCACATC+TGG | 0.513917 | 5.3:-68103887 | MS.gene29733:CDS |
| TAAGTATTGACTTGAGTTGG+AGG | 0.516113 | 5.3:+68104548 | None:intergenic |
| CTCTACTATGCTCGATCGAA+AGG | 0.521577 | 5.3:-68101157 | MS.gene29733:CDS |
| AAAGTTAAGGAATGGGAAGT+AGG | 0.522034 | 5.3:-68103842 | MS.gene29733:CDS |
| AATGTAGGTGCATGATGAGA+GGG | 0.523705 | 5.3:-68100625 | MS.gene29733:intron |
| ACCCCTTCTTATGGTTAGGA+AGG | 0.525971 | 5.3:-68103545 | MS.gene29733:CDS |
| ATGTATTTGATGTCAAGATC+AGG | 0.527017 | 5.3:+68101100 | None:intergenic |
| TTGACTTCAGCAATCAATCC+CGG | 0.531405 | 5.3:+68103451 | None:intergenic |
| GGGCCTTCCTAACCATAAGA+AGG | 0.532318 | 5.3:+68103542 | None:intergenic |
| AAGAATTCATCATAGATGCT+TGG | 0.536166 | 5.3:-68101183 | MS.gene29733:CDS |
| ATTGCTTATGTACAAGAAGC+AGG | 0.536943 | 5.3:-68100235 | MS.gene29733:CDS |
| GGCCTTCCTAACCATAAGAA+GGG | 0.541500 | 5.3:+68103543 | None:intergenic |
| AAACAAAGTGATCCTGGAAA+GGG | 0.548778 | 5.3:-68099835 | MS.gene29733:CDS |
| TAATGTAGGTGCATGATGAG+AGG | 0.574784 | 5.3:-68100626 | MS.gene29733:intron |
| TCAATTCCGGTTGCAGAACG+AGG | 0.575802 | 5.3:-68103729 | MS.gene29733:CDS |
| GATCGTGTTCTTGGAATAGA+GGG | 0.577340 | 5.3:-68100597 | MS.gene29733:CDS |
| CCAATAAAATCCCGAACAGG+AGG | 0.579688 | 5.3:+68103508 | None:intergenic |
| ATTGATTGCTGAAGTCAAGA+AGG | 0.582300 | 5.3:-68103446 | MS.gene29733:CDS |
| GAAACAAAGTGATCCTGGAA+AGG | 0.587322 | 5.3:-68099836 | MS.gene29733:CDS |
| AATGAGGTTGCTGCTACCCA+AGG | 0.588159 | 5.3:-68103809 | MS.gene29733:CDS |
| CAATTCCGGTTGCAGAACGA+GGG | 0.593820 | 5.3:-68103728 | MS.gene29733:CDS |
| TGATCTTGACATCAAATACA+TGG | 0.599333 | 5.3:-68101098 | MS.gene29733:CDS |
| TGGACTGGCAGCTCTTGTTG+AGG | 0.600595 | 5.3:-68101056 | MS.gene29733:intron |
| GGAAGAGATTGTGTGGAACA+AGG | 0.601540 | 5.3:-68103684 | MS.gene29733:CDS |
| CAAGGACAAAGAAGTCGCGC+AGG | 0.602152 | 5.3:-68103666 | MS.gene29733:intron |
| TGGGATTGGAAGAGAACGAA+GGG | 0.606231 | 5.3:+68104582 | None:intergenic |
| AACCACAGATTCACCAGATG+TGG | 0.614744 | 5.3:+68103874 | None:intergenic |
| GCTCAATCTTATGAGAAAGG+TGG | 0.618974 | 5.3:-68101549 | MS.gene29733:CDS |
| GCCTTCCTAACCATAAGAAG+GGG | 0.620205 | 5.3:+68103544 | None:intergenic |
| GAATCCTTGATTTCTCTCAA+GGG | 0.623977 | 5.3:-68104620 | MS.gene29733:CDS |
| AAGAAGGCTTCACCAAGTAG+AGG | 0.628444 | 5.3:-68103430 | MS.gene29733:CDS |
| AAGCTTCTTGAAGGAGAGCG+AGG | 0.630844 | 5.3:-68100413 | MS.gene29733:CDS |
| GGTCCTACATAATGATTAGG+GGG | 0.633768 | 5.3:+68103755 | None:intergenic |
| ACATCTTGGAAGAGATTGTG+TGG | 0.641943 | 5.3:-68103691 | MS.gene29733:CDS |
| AGCCACATCTGGTGAATCTG+TGG | 0.650573 | 5.3:-68103876 | MS.gene29733:CDS |
| AGGTCCTACATAATGATTAG+GGG | 0.661433 | 5.3:+68103754 | None:intergenic |
| CTGGGATTGGAAGAGAACGA+AGG | 0.670959 | 5.3:+68104581 | None:intergenic |
| ATCTCTTCCAAGATGTTACG+TGG | 0.686071 | 5.3:+68103698 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTTAAATTAAAATTA+GGG | + | chr5.3:68104360-68104379 | None:intergenic | 0.0% |
| !! | TATAAATTTAAATTAAAATT+AGG | + | chr5.3:68104361-68104380 | None:intergenic | 0.0% |
| !! | AACATTATAAAAAAATCAAA+AGG | + | chr5.3:68100126-68100145 | None:intergenic | 10.0% |
| !! | ACATTATAAAAAAATCAAAA+GGG | + | chr5.3:68100125-68100144 | None:intergenic | 10.0% |
| !! | TAACTATAAAAATTTGTATA+TGG | + | chr5.3:68104384-68104403 | None:intergenic | 10.0% |
| !! | TACTTGTAAATATAATAAAT+AGG | + | chr5.3:68103543-68103562 | None:intergenic | 10.0% |
| !! | AAACATTATATGAAACAAAA+AGG | + | chr5.3:68100305-68100324 | None:intergenic | 15.0% |
| !! | AAATATGATCAAAATCAAAA+AGG | + | chr5.3:68100470-68100489 | None:intergenic | 15.0% |
| !! | AACAATAAAACAATACAAAA+AGG | + | chr5.3:68099965-68099984 | None:intergenic | 15.0% |
| !! | AACATTATATGAAACAAAAA+GGG | + | chr5.3:68100304-68100323 | None:intergenic | 15.0% |
| !! | AATATGATCAAAATCAAAAA+GGG | + | chr5.3:68100469-68100488 | None:intergenic | 15.0% |
| !! | CAAAAGAAATATATAAATCA+AGG | + | chr5.3:68103761-68103780 | None:intergenic | 15.0% |
| !! | TGTTGTAATATTTATACTTA+CGG | - | chr5.3:68103909-68103928 | MS.gene29733:intron | 15.0% |
| !!! | AAGTTAATTTTGTATAGTTA+CGG | + | chr5.3:68103600-68103619 | None:intergenic | 15.0% |
| !!! | ATAATGTTTTTGTGATTATT+TGG | - | chr5.3:68100138-68100157 | MS.gene29733:intron | 15.0% |
| !!! | ATTTTTTGTATTTAATTGAG+AGG | - | chr5.3:68100441-68100460 | MS.gene29733:CDS | 15.0% |
| !!! | ATTTTTTTGGTTTAATTTTG+AGG | - | chr5.3:68100276-68100295 | MS.gene29733:intron | 15.0% |
| !!! | CTTGATTTATATATTTCTTT+TGG | - | chr5.3:68103759-68103778 | MS.gene29733:CDS | 15.0% |
| !!! | TTGATTTTGATCATATTTTT+GGG | - | chr5.3:68100472-68100491 | MS.gene29733:intron | 15.0% |
| !!! | TTGTTTCATATAATGTTTTT+TGG | - | chr5.3:68100307-68100326 | MS.gene29733:intron | 15.0% |
| !!! | TTTGATTTTGATCATATTTT+TGG | - | chr5.3:68100471-68100490 | MS.gene29733:intron | 15.0% |
| !! | AAGTTCATATTTACATTAAC+TGG | + | chr5.3:68101603-68101622 | None:intergenic | 20.0% |
| !! | ACTTTAAACTGATGATTATA+TGG | - | chr5.3:68104117-68104136 | MS.gene29733:intron | 20.0% |
| !! | AGTTCATATTTACATTAACT+GGG | + | chr5.3:68101602-68101621 | None:intergenic | 20.0% |
| !! | ATTATATGGTTATGTTTAGA+TGG | - | chr5.3:68104131-68104150 | MS.gene29733:intron | 20.0% |
| !! | ATTTAGCAAAGACAAATAAA+AGG | + | chr5.3:68101397-68101416 | None:intergenic | 20.0% |
| !! | TAAAAAAGAAAAAACAGAAC+AGG | + | chr5.3:68101820-68101839 | None:intergenic | 20.0% |
| !! | TTATCATTCATTTCATAAAG+AGG | - | chr5.3:68102506-68102525 | MS.gene29733:intron | 20.0% |
| !!! | AATTGTTTATGATTTGTTGA+CGG | - | chr5.3:68104472-68104491 | MS.gene29733:intron | 20.0% |
| !!! | ATGTAAATATGAACTTTTGA+AGG | - | chr5.3:68101607-68101626 | MS.gene29733:intron | 20.0% |
| !!! | ATTATTTGCTGTTTTGATTA+AGG | - | chr5.3:68100330-68100349 | MS.gene29733:intron | 20.0% |
| !!! | ATTATTTGGTGTTATGATTA+TGG | - | chr5.3:68100152-68100171 | MS.gene29733:intron | 20.0% |
| !!! | GATTATTTGATGTTTTGATT+AGG | - | chr5.3:68100494-68100513 | MS.gene29733:intron | 20.0% |
| !!! | GTTGATGCATATTATTTTTT+TGG | - | chr5.3:68100263-68100282 | MS.gene29733:CDS | 20.0% |
| !!! | GTTTGTTTTGTGAAATTTTA+AGG | + | chr5.3:68101996-68102015 | None:intergenic | 20.0% |
| !!! | TGTTATTAAGTCGATTATTT+TGG | - | chr5.3:68101850-68101869 | MS.gene29733:intron | 20.0% |
| !!! | TTTTATCATTCATTTCATAG+TGG | - | chr5.3:68102584-68102603 | MS.gene29733:intron | 20.0% |
| !!! | TTTTCGTTGTATATTTATCT+GGG | - | chr5.3:68099984-68100003 | MS.gene29733:intron | 20.0% |
| !!! | TTTTTCGTTGTATATTTATC+TGG | - | chr5.3:68099983-68100002 | MS.gene29733:intron | 20.0% |
| ! | AAAACTAAATACACTAGATG+TGG | + | chr5.3:68100386-68100405 | None:intergenic | 25.0% |
| ! | AAATCAGTCATAAAAGTTCA+AGG | + | chr5.3:68103632-68103651 | None:intergenic | 25.0% |
| ! | AAGTTATTACTGATATCATG+TGG | - | chr5.3:68101105-68101124 | MS.gene29733:CDS | 25.0% |
| ! | AGTGTAATTTAAACTGTGAT+CGG | - | chr5.3:68103502-68103521 | MS.gene29733:CDS | 25.0% |
| ! | AGTTATTACTGATATCATGT+GGG | - | chr5.3:68101106-68101125 | MS.gene29733:CDS | 25.0% |
| ! | CAAATGAACTTCCAAAAAAT+AGG | + | chr5.3:68101738-68101757 | None:intergenic | 25.0% |
| ! | CACTGCTAAATGTTAATATT+TGG | - | chr5.3:68102982-68103001 | MS.gene29733:intron | 25.0% |
| ! | GAAGAAATAAAAACTGACAA+CGG | + | chr5.3:68101934-68101953 | None:intergenic | 25.0% |
| ! | GAAGAAGAAATCTTAAATAG+TGG | + | chr5.3:68102221-68102240 | None:intergenic | 25.0% |
| ! | GTAGAATAAATCGTATATCA+AGG | + | chr5.3:68103147-68103166 | None:intergenic | 25.0% |
| ! | GTTAAGATATGCAAATTACT+TGG | - | chr5.3:68103345-68103364 | MS.gene29733:intron | 25.0% |
| ! | GTTCATATTTACATTAACTG+GGG | + | chr5.3:68101601-68101620 | None:intergenic | 25.0% |
| ! | TCATAAAGAGGTAGAAATTA+GGG | - | chr5.3:68102518-68102537 | MS.gene29733:intron | 25.0% |
| ! | TTCATAAAGAGGTAGAAATT+AGG | - | chr5.3:68102517-68102536 | MS.gene29733:intron | 25.0% |
| !! | GTCAGATCTTTAAAAACATT+TGG | - | chr5.3:68104417-68104436 | MS.gene29733:intron | 25.0% |
| !! | TGGTTTAGTTGAATTTTGAA+TGG | - | chr5.3:68100031-68100050 | MS.gene29733:intron | 25.0% |
| !! | TTATCAGTTGATATCAAGTA+CGG | - | chr5.3:68101708-68101727 | MS.gene29733:intron | 25.0% |
| !!! | AGAAGTATTGCTTCAAAATA+AGG | - | chr5.3:68101793-68101812 | MS.gene29733:intron | 25.0% |
| !!! | GAAGTATTGCTTCAAAATAA+GGG | - | chr5.3:68101794-68101813 | MS.gene29733:intron | 25.0% |
| !!! | GACAGATGAAAAGTATTTTA+AGG | - | chr5.3:68102916-68102935 | MS.gene29733:intron | 25.0% |
| !!! | GTTTTTATTTCTTCTCTTCA+CGG | - | chr5.3:68101940-68101959 | MS.gene29733:intron | 25.0% |
| !!! | TCTCTCTCATTTTTCTTTTT+GGG | - | chr5.3:68100007-68100026 | MS.gene29733:intron | 25.0% |
| !!! | TGAATTGTTGATTCAGTTTT+GGG | - | chr5.3:68102083-68102102 | MS.gene29733:intron | 25.0% |
| AAAGGTCCTACATAATGATT+AGG | + | chr5.3:68100672-68100691 | None:intergenic | 30.0% | |
| AAATTCAATCAACTCACTTC+AGG | + | chr5.3:68103477-68103496 | None:intergenic | 30.0% | |
| AAGAATTCATCATAGATGCT+TGG | - | chr5.3:68103238-68103257 | MS.gene29733:intron | 30.0% | |
| AAGGTCCTACATAATGATTA+GGG | + | chr5.3:68100671-68100690 | None:intergenic | 30.0% | |
| AATAAGAAATGCTGGAGTAA+AGG | - | chr5.3:68103098-68103117 | MS.gene29733:intron | 30.0% | |
| AATCAACACAATTCACAAGA+TGG | + | chr5.3:68100210-68100229 | None:intergenic | 30.0% | |
| AGGTTGAATTCACAACATAA+TGG | - | chr5.3:68102826-68102845 | MS.gene29733:intron | 30.0% | |
| AGTAGGAATGTTTCATAATG+AGG | - | chr5.3:68100596-68100615 | MS.gene29733:CDS | 30.0% | |
| ATGAATTCTTTGCACAACAA+AGG | + | chr5.3:68103228-68103247 | None:intergenic | 30.0% | |
| ATGGTTATGTTTAGATGGTT+GGG | - | chr5.3:68104136-68104155 | MS.gene29733:intron | 30.0% | |
| ATGTATTTGATGTCAAGATC+AGG | + | chr5.3:68103324-68103343 | None:intergenic | 30.0% | |
| ATGTGTGGAACAAATATCAA+AGG | + | chr5.3:68102785-68102804 | None:intergenic | 30.0% | |
| ATTGCTCAATCTTATGAGAA+AGG | - | chr5.3:68102869-68102888 | MS.gene29733:intron | 30.0% | |
| ATTTAACCAACGAGATTCAA+AGG | + | chr5.3:68101351-68101370 | None:intergenic | 30.0% | |
| CAAACATAATCCAAGATTAC+AGG | + | chr5.3:68102699-68102718 | None:intergenic | 30.0% | |
| CAAACTGGGTAAACAAATAT+TGG | - | chr5.3:68102650-68102669 | MS.gene29733:intron | 30.0% | |
| CAAGTATGAAATCTACAGAT+AGG | - | chr5.3:68103557-68103576 | MS.gene29733:CDS | 30.0% | |
| CAATATTTGTTTACCCAGTT+TGG | + | chr5.3:68102652-68102671 | None:intergenic | 30.0% | |
| GATTCAGTGTTGTCAAATAA+CGG | - | chr5.3:68101162-68101181 | MS.gene29733:CDS | 30.0% | |
| GGAAATCAAAACAAACTTAC+TGG | + | chr5.3:68101039-68101058 | None:intergenic | 30.0% | |
| GTAAAACAGCAGCAATTAAA+AGG | + | chr5.3:68103302-68103321 | None:intergenic | 30.0% | |
| GTAATCTTGGATTATGTTTG+TGG | - | chr5.3:68102699-68102718 | MS.gene29733:intron | 30.0% | |
| TAGCTATTATAGTGTAAGCT+TGG | - | chr5.3:68103450-68103469 | MS.gene29733:CDS | 30.0% | |
| TATGGTTATGTTTAGATGGT+TGG | - | chr5.3:68104135-68104154 | MS.gene29733:intron | 30.0% | |
| TATTCTCTTACCTGTAATCT+TGG | - | chr5.3:68102686-68102705 | MS.gene29733:intron | 30.0% | |
| TCTCCTTATTCTTATACCTT+GGG | + | chr5.3:68100631-68100650 | None:intergenic | 30.0% | |
| TGAAAAAGGGGTAGAAATTA+GGG | - | chr5.3:68102438-68102457 | MS.gene29733:intron | 30.0% | |
| TGAATTCTTTGCACAACAAA+GGG | + | chr5.3:68103227-68103246 | None:intergenic | 30.0% | |
| TGATCTTGACATCAAATACA+TGG | - | chr5.3:68103323-68103342 | MS.gene29733:intron | 30.0% | |
| TGTTTCTCAATAACTAGTAC+AGG | - | chr5.3:68101756-68101775 | MS.gene29733:intron | 30.0% | |
| TTCTCCTTATTCTTATACCT+TGG | + | chr5.3:68100632-68100651 | None:intergenic | 30.0% | |
| TTGAAAAAGGGGTAGAAATT+AGG | - | chr5.3:68102437-68102456 | MS.gene29733:intron | 30.0% | |
| TTGGAGTTAATAAGAAATGC+TGG | - | chr5.3:68103090-68103109 | MS.gene29733:intron | 30.0% | |
| TTGTGCTTATGTGAACTATT+TGG | - | chr5.3:68100832-68100851 | MS.gene29733:intron | 30.0% | |
| TTTAACCAACGAGATTCAAA+GGG | + | chr5.3:68101350-68101369 | None:intergenic | 30.0% | |
| TTTCTCTCTTGATTTCTCTT+AGG | - | chr5.3:68102392-68102411 | MS.gene29733:intron | 30.0% | |
| ! | AAACACTTTTCATTCACCTT+GGG | - | chr5.3:68102337-68102356 | MS.gene29733:intron | 30.0% |
| ! | ACGTTGAAGTTTGAAAGTTT+TGG | - | chr5.3:68102014-68102033 | MS.gene29733:intron | 30.0% |
| ! | CTCTTTTGTCAATTTTTCAC+AGG | - | chr5.3:68104540-68104559 | MS.gene29733:CDS | 30.0% |
| ! | TGTCAATTTTTCACAGGTTT+TGG | - | chr5.3:68104546-68104565 | MS.gene29733:CDS | 30.0% |
| ! | TGTTAGATATGTTGCTTGAA+GGG | + | chr5.3:68101911-68101930 | None:intergenic | 30.0% |
| ! | TTCTTAAAAGTTCCCTCTTT+TGG | + | chr5.3:68102268-68102287 | None:intergenic | 30.0% |
| !! | AATTTTTCACAGGTTTTGGT+GGG | - | chr5.3:68104550-68104569 | MS.gene29733:CDS | 30.0% |
| !! | ATTTGGTGTTATGATTATGG+TGG | - | chr5.3:68100155-68100174 | MS.gene29733:intron | 30.0% |
| !! | CTATAAGTATTGACTTGAGT+TGG | + | chr5.3:68099879-68099898 | None:intergenic | 30.0% |
| !! | CTCTCTCATTTTTCTTTTTG+GGG | - | chr5.3:68100008-68100027 | MS.gene29733:intron | 30.0% |
| !! | GGAACTTTTAAGAAACTTAG+AGG | - | chr5.3:68102274-68102293 | MS.gene29733:intron | 30.0% |
| !! | GTCTCTCTCATTTTTCTTTT+TGG | - | chr5.3:68100006-68100025 | MS.gene29733:intron | 30.0% |
| !! | TCATTCATTTCATAGTGGAT+TGG | - | chr5.3:68102589-68102608 | MS.gene29733:intron | 30.0% |
| !! | TTTTATTTGAGTCATGCTTG+CGG | - | chr5.3:68101437-68101456 | MS.gene29733:intron | 30.0% |
| !! | TTTTTCTAGTGTCATAAGCA+TGG | + | chr5.3:68103190-68103209 | None:intergenic | 30.0% |
| !!! | AGTACGGTATACCTATTTTT+TGG | - | chr5.3:68101724-68101743 | MS.gene29733:intron | 30.0% |
| !!! | CTGAATTGTTGATTCAGTTT+TGG | - | chr5.3:68102082-68102101 | MS.gene29733:intron | 30.0% |
| !!! | GATTTTTGTTTTCTTGTCCA+GGG | - | chr5.3:68103054-68103073 | MS.gene29733:intron | 30.0% |
| !!! | TGATTTTTGTTTTCTTGTCC+AGG | - | chr5.3:68103053-68103072 | MS.gene29733:intron | 30.0% |
| !!! | TTGTTTTGATCATCTAATGC+AGG | - | chr5.3:68101495-68101514 | MS.gene29733:intron | 30.0% |
| AAACAAAGTGATCCTGGAAA+GGG | - | chr5.3:68104586-68104605 | MS.gene29733:CDS | 35.0% | |
| AAAGTTAAGGAATGGGAAGT+AGG | - | chr5.3:68100579-68100598 | MS.gene29733:CDS | 35.0% | |
| AAATACACCACGTAACATCT+TGG | - | chr5.3:68100716-68100735 | MS.gene29733:intron | 35.0% | |
| AAGCACTCAAAGTTAAGGAA+TGG | - | chr5.3:68100571-68100590 | MS.gene29733:CDS | 35.0% | |
| AAGGGAATTAGCAATCTCTT+TGG | - | chr5.3:68104604-68104623 | MS.gene29733:CDS | 35.0% | |
| AGAAAGAAAACCCCTTCTTA+TGG | - | chr5.3:68100867-68100886 | MS.gene29733:intron | 35.0% | |
| AGCACTCAAAGTTAAGGAAT+GGG | - | chr5.3:68100572-68100591 | MS.gene29733:CDS | 35.0% | |
| AGGTCCTACATAATGATTAG+GGG | + | chr5.3:68100670-68100689 | None:intergenic | 35.0% | |
| ATTAAGGTGAAGCATGATGA+TGG | - | chr5.3:68100346-68100365 | MS.gene29733:intron | 35.0% | |
| ATTGATTGCTGAAGTCAAGA+AGG | - | chr5.3:68100975-68100994 | MS.gene29733:intron | 35.0% | |
| ATTGCTTATGTACAAGAAGC+AGG | - | chr5.3:68104186-68104205 | MS.gene29733:intron | 35.0% | |
| ATTGTGAAACAAAGTGATCC+TGG | - | chr5.3:68104580-68104599 | MS.gene29733:CDS | 35.0% | |
| CAATAACTAGTACAGGTTCA+TGG | - | chr5.3:68101763-68101782 | MS.gene29733:intron | 35.0% | |
| CTACCCAAGGTATAAGAATA+AGG | - | chr5.3:68100625-68100644 | MS.gene29733:intron | 35.0% | |
| GAATCCTTGATTTCTCTCAA+GGG | - | chr5.3:68099801-68099820 | MS.gene29733:CDS | 35.0% | |
| GAATGGTATATGCGTTCAAT+TGG | - | chr5.3:68100048-68100067 | MS.gene29733:intron | 35.0% | |
| GATATGCAAATTACTTGGAC+TGG | - | chr5.3:68103350-68103369 | MS.gene29733:intron | 35.0% | |
| GATTACAGGTAAGAGAATAG+AGG | + | chr5.3:68102685-68102704 | None:intergenic | 35.0% | |
| TCATAAACACAACCACAATG+AGG | - | chr5.3:68104259-68104278 | MS.gene29733:intron | 35.0% | |
| TCCAGCACAAATAAGAAACA+TGG | + | chr5.3:68103737-68103756 | None:intergenic | 35.0% | |
| TGATGCGATGCAAAAATACA+AGG | + | chr5.3:68101879-68101898 | None:intergenic | 35.0% | |
| TGGTTATGTTTAGATGGTTG+GGG | - | chr5.3:68104137-68104156 | MS.gene29733:intron | 35.0% | |
| TGTACATAAGCAATGTCTTC+AGG | + | chr5.3:68104180-68104199 | None:intergenic | 35.0% | |
| TTAACCAACGAGATTCAAAG+GGG | + | chr5.3:68101349-68101368 | None:intergenic | 35.0% | |
| TTAAGAAACTTAGAGGCGAA+GGG | - | chr5.3:68102281-68102300 | MS.gene29733:intron | 35.0% | |
| TTCTCTTAGGATCTCATTGT+GGG | - | chr5.3:68102405-68102424 | MS.gene29733:intron | 35.0% | |
| TTTAAGAAACTTAGAGGCGA+AGG | - | chr5.3:68102280-68102299 | MS.gene29733:intron | 35.0% | |
| TTTCTCTTAGGATCTCATTG+TGG | - | chr5.3:68102404-68102423 | MS.gene29733:intron | 35.0% | |
| ! | ATGTAGGACCTTTTCAATTC+CGG | - | chr5.3:68100679-68100698 | MS.gene29733:intron | 35.0% |
| ! | ATTATGGTGGAGCATAATGA+AGG | - | chr5.3:68100168-68100187 | MS.gene29733:intron | 35.0% |
| ! | CATGTGGGAAATGTTTGTTT+TGG | - | chr5.3:68101121-68101140 | MS.gene29733:CDS | 35.0% |
| ! | GAAACACTTTTCATTCACCT+TGG | - | chr5.3:68102336-68102355 | MS.gene29733:intron | 35.0% |
| ! | GAATCTCGTTGGTTAAATTC+AGG | - | chr5.3:68101353-68101372 | MS.gene29733:intron | 35.0% |
| ! | GGTCTACATAAAGCATTAGA+TGG | + | chr5.3:68103169-68103188 | None:intergenic | 35.0% |
| ! | GTGTTAGATATGTTGCTTGA+AGG | + | chr5.3:68101912-68101931 | None:intergenic | 35.0% |
| !! | AAAATTAGGGGCATCGATAT+AGG | + | chr5.3:68104347-68104366 | None:intergenic | 35.0% |
| !! | AGTAGAGTGTTGTCAAATAG+TGG | - | chr5.3:68101242-68101261 | MS.gene29733:intron | 35.0% |
| !! | CAATTTTTCACAGGTTTTGG+TGG | - | chr5.3:68104549-68104568 | MS.gene29733:CDS | 35.0% |
| !! | CATAATGGATTCTCTCTTAC+AGG | - | chr5.3:68102841-68102860 | MS.gene29733:intron | 35.0% |
| !! | TAAGTATTGACTTGAGTTGG+AGG | + | chr5.3:68099876-68099895 | None:intergenic | 35.0% |
| !! | TCTCATTTTTCTTTTTGGGG+TGG | - | chr5.3:68100011-68100030 | MS.gene29733:intron | 35.0% |
| !!! | ACTCTTTTGAGACCAAAAGA+GGG | - | chr5.3:68102253-68102272 | MS.gene29733:intron | 35.0% |
| !!! | GTTTGTTCTAGAAGAGCTTT+TGG | - | chr5.3:68102460-68102479 | MS.gene29733:intron | 35.0% |
| !!! | TACTCTTTTGAGACCAAAAG+AGG | - | chr5.3:68102252-68102271 | MS.gene29733:intron | 35.0% |
| !!! | TGTGGCTTCTATTTTTTGTG+TGG | - | chr5.3:68103947-68103966 | MS.gene29733:intron | 35.0% |
| ACATCTTGGAAGAGATTGTG+TGG | - | chr5.3:68100730-68100749 | MS.gene29733:intron | 40.0% | |
| AGATTGCTAATTCCCTTTCC+AGG | + | chr5.3:68104601-68104620 | None:intergenic | 40.0% | |
| ATCTCTTCCAAGATGTTACG+TGG | + | chr5.3:68100726-68100745 | None:intergenic | 40.0% | |
| ATTGTAGCCGAACCTTCATT+AGG | + | chr5.3:68100525-68100544 | None:intergenic | 40.0% | |
| CATAAGCTAAAGCCTCATTG+TGG | + | chr5.3:68104274-68104293 | None:intergenic | 40.0% | |
| CCAATATGACCTACATCTAG+GGG | + | chr5.3:68102628-68102647 | None:intergenic | 40.0% | |
| CCCAATATGACCTACATCTA+GGG | + | chr5.3:68102629-68102648 | None:intergenic | 40.0% | |
| CCCTAGATGTAGGTCATATT+GGG | - | chr5.3:68102626-68102645 | MS.gene29733:intron | 40.0% | |
| CTGAATCAGATATAGCCAGT+TGG | + | chr5.3:68101149-68101168 | None:intergenic | 40.0% | |
| GAAAACCCCTTCTTATGGTT+AGG | - | chr5.3:68100872-68100891 | MS.gene29733:intron | 40.0% | |
| GAAACAAAGTGATCCTGGAA+AGG | - | chr5.3:68104585-68104604 | MS.gene29733:CDS | 40.0% | |
| GATAACCTCAAAGATCACAG+TGG | + | chr5.3:68101060-68101079 | None:intergenic | 40.0% | |
| GATCGTGTTCTTGGAATAGA+GGG | - | chr5.3:68103824-68103843 | MS.gene29733:CDS | 40.0% | |
| GATTTCCACTGTGATCTTTG+AGG | - | chr5.3:68101052-68101071 | MS.gene29733:intron | 40.0% | |
| GCTCAATCTTATGAGAAAGG+TGG | - | chr5.3:68102872-68102891 | MS.gene29733:intron | 40.0% | |
| GCTTGAGACTGTTTGGTTAT+TGG | - | chr5.3:68102756-68102775 | MS.gene29733:intron | 40.0% | |
| GGAATCCTTGATTTCTCTCA+AGG | - | chr5.3:68099800-68099819 | MS.gene29733:CDS | 40.0% | |
| GGCATCAACAATCGTAATCT+TGG | - | chr5.3:68103860-68103879 | MS.gene29733:CDS | 40.0% | |
| GGTCCTACATAATGATTAGG+GGG | + | chr5.3:68100669-68100688 | None:intergenic | 40.0% | |
| GTTACCCTTGAGAGAAATCA+AGG | + | chr5.3:68099808-68099827 | None:intergenic | 40.0% | |
| TAATGAACGAACTGGATTGC+CGG | - | chr5.3:68100951-68100970 | MS.gene29733:intron | 40.0% | |
| TGATGCTTGTCTAAGTCATG+TGG | + | chr5.3:68101662-68101681 | None:intergenic | 40.0% | |
| TTCTGCAACCGGAATTGAAA+AGG | + | chr5.3:68100690-68100709 | None:intergenic | 40.0% | |
| TTGAAAATGCACCTCCTGTT+CGG | - | chr5.3:68100902-68100921 | MS.gene29733:intron | 40.0% | |
| TTGACTTCAGCAATCAATCC+CGG | + | chr5.3:68100973-68100992 | None:intergenic | 40.0% | |
| TTGCTGATCACAGAAACTAG+CGG | + | chr5.3:68101313-68101332 | None:intergenic | 40.0% | |
| ! | AATAACGGCTCTAGCACTAT+AGG | - | chr5.3:68101177-68101196 | MS.gene29733:CDS | 40.0% |
| ! | ATAACGGCTCTAGCACTATA+GGG | - | chr5.3:68101178-68101197 | MS.gene29733:CDS | 40.0% |
| ! | CCAAATTTTCAAAGCTTCCC+TGG | + | chr5.3:68103074-68103093 | None:intergenic | 40.0% |
| ! | CTCCTGTTCGGGATTTTATT+GGG | - | chr5.3:68100914-68100933 | MS.gene29733:intron | 40.0% |
| ! | GATATGTTGCTTGAAGGGTT+TGG | + | chr5.3:68101906-68101925 | None:intergenic | 40.0% |
| ! | GCCATGTTTCTTATTTGTGC+TGG | - | chr5.3:68103733-68103752 | MS.gene29733:CDS | 40.0% |
| ! | GGTTGAAGCACTCAAAGTTA+AGG | - | chr5.3:68100566-68100585 | MS.gene29733:CDS | 40.0% |
| ! | TCCTGTTCGGGATTTTATTG+GGG | - | chr5.3:68100915-68100934 | MS.gene29733:intron | 40.0% |
| ! | TGTTGTTGCTTGAGACTGTT+TGG | - | chr5.3:68102749-68102768 | MS.gene29733:intron | 40.0% |
| !! | AACAGGAGGTGCATTTTCAA+GGG | + | chr5.3:68100902-68100921 | None:intergenic | 40.0% |
| !! | CCAGGGAAGCTTTGAAAATT+TGG | - | chr5.3:68103071-68103090 | MS.gene29733:intron | 40.0% |
| !! | GGATTTTATTGGGGCTCTAA+GGG | - | chr5.3:68100924-68100943 | MS.gene29733:intron | 40.0% |
| !! | TGCTTTTGGGTGAGATTCTT+GGG | - | chr5.3:68102309-68102328 | MS.gene29733:intron | 40.0% |
| !!! | ATGTTTGTTTTGGCTCCAAC+TGG | - | chr5.3:68101131-68101150 | MS.gene29733:CDS | 40.0% |
| AACCACAGATTCACCAGATG+TGG | + | chr5.3:68100550-68100569 | None:intergenic | 45.0% | |
| AAGAAGGCTTCACCAAGTAG+AGG | - | chr5.3:68100991-68101010 | MS.gene29733:intron | 45.0% | |
| AATGAACGAACTGGATTGCC+GGG | - | chr5.3:68100952-68100971 | MS.gene29733:intron | 45.0% | |
| ACAAGAACCAGCTACAGTGT+AGG | + | chr5.3:68103668-68103687 | None:intergenic | 45.0% | |
| ACACATCTAAGTTCGTGGTG+TGG | - | chr5.3:68102799-68102818 | MS.gene29733:intron | 45.0% | |
| ACACCACGAACTTAGATGTG+TGG | + | chr5.3:68102800-68102819 | None:intergenic | 45.0% | |
| ACCACGAAGAAGCTTCTTGA+AGG | - | chr5.3:68103999-68104018 | MS.gene29733:intron | 45.0% | |
| ACCCCTTCTTATGGTTAGGA+AGG | - | chr5.3:68100876-68100895 | MS.gene29733:intron | 45.0% | |
| AGGGAATTCGATCGTGTTCT+TGG | - | chr5.3:68103815-68103834 | MS.gene29733:CDS | 45.0% | |
| AGGTCATATTGGGCCAAACT+GGG | - | chr5.3:68102636-68102655 | MS.gene29733:intron | 45.0% | |
| AGTTGGAGGAATAGTGGTTC+TGG | + | chr5.3:68099862-68099881 | None:intergenic | 45.0% | |
| ATAAGGAGAAGACCACCAAC+TGG | - | chr5.3:68100642-68100661 | MS.gene29733:intron | 45.0% | |
| CCAATAAAATCCCGAACAGG+AGG | + | chr5.3:68100916-68100935 | None:intergenic | 45.0% | |
| CCCCTAGATGTAGGTCATAT+TGG | - | chr5.3:68102625-68102644 | MS.gene29733:intron | 45.0% | |
| CGATCGTGTTCTTGGAATAG+AGG | - | chr5.3:68103823-68103842 | MS.gene29733:CDS | 45.0% | |
| CTCTACTATGCTCGATCGAA+AGG | - | chr5.3:68103264-68103283 | MS.gene29733:intron | 45.0% | |
| GATTAGGCAGAGCCTAATGA+AGG | - | chr5.3:68100510-68100529 | MS.gene29733:intron | 45.0% | |
| GCAAAACTGTTCATTCCGCA+AGG | - | chr5.3:68102038-68102057 | MS.gene29733:intron | 45.0% | |
| GCCCAATATGACCTACATCT+AGG | + | chr5.3:68102630-68102649 | None:intergenic | 45.0% | |
| GCCTTCCTAACCATAAGAAG+GGG | + | chr5.3:68100880-68100899 | None:intergenic | 45.0% | |
| GCTACAACACTGTAGCATAG+CGG | - | chr5.3:68101275-68101294 | MS.gene29733:intron | 45.0% | |
| GGAAGAGATTGTGTGGAACA+AGG | - | chr5.3:68100737-68100756 | MS.gene29733:intron | 45.0% | |
| GGACCCCCTAATCATTATGT+AGG | - | chr5.3:68100663-68100682 | MS.gene29733:intron | 45.0% | |
| GGCCTTCCTAACCATAAGAA+GGG | + | chr5.3:68100881-68100900 | None:intergenic | 45.0% | |
| GGGTCGAACGACTTGAAAAA+GGG | - | chr5.3:68102425-68102444 | MS.gene29733:intron | 45.0% | |
| GGTCGAACGACTTGAAAAAG+GGG | - | chr5.3:68102426-68102445 | MS.gene29733:intron | 45.0% | |
| GGTGGTGAGATCTCATTAGA+GGG | - | chr5.3:68102358-68102377 | MS.gene29733:intron | 45.0% | |
| GTTCCACACATCTAAGTTCG+TGG | - | chr5.3:68102794-68102813 | MS.gene29733:intron | 45.0% | |
| GTTGGAGGAATAGTGGTTCT+GGG | + | chr5.3:68099861-68099880 | None:intergenic | 45.0% | |
| GTTTAGATGGTTGGGGAATC+TGG | - | chr5.3:68104144-68104163 | MS.gene29733:intron | 45.0% | |
| TAAGTTCGTGGTGTGGTTTG+AGG | - | chr5.3:68102806-68102825 | MS.gene29733:intron | 45.0% | |
| TAATGAGATCTCACCACCCA+AGG | + | chr5.3:68102356-68102375 | None:intergenic | 45.0% | |
| TAATGATTAGGGGGTCCAGT+TGG | + | chr5.3:68100660-68100679 | None:intergenic | 45.0% | |
| TAGACCCCTTTGAATCTCGT+TGG | - | chr5.3:68101342-68101361 | MS.gene29733:CDS | 45.0% | |
| TAGGTCATATTGGGCCAAAC+TGG | - | chr5.3:68102635-68102654 | MS.gene29733:intron | 45.0% | |
| TATTTCCCTCGTTCTGCAAC+CGG | + | chr5.3:68100701-68100720 | None:intergenic | 45.0% | |
| TCCTTCAAGAAGCTTCTTCG+TGG | + | chr5.3:68104003-68104022 | None:intergenic | 45.0% | |
| TCTCTCAAGATGCCTCTACT+TGG | + | chr5.3:68101006-68101025 | None:intergenic | 45.0% | |
| TGAAAATGCACCTCCTGTTC+GGG | - | chr5.3:68100903-68100922 | MS.gene29733:intron | 45.0% | |
| TGGGATTGGAAGAGAACGAA+GGG | + | chr5.3:68099842-68099861 | None:intergenic | 45.0% | |
| TGGGTCGAACGACTTGAAAA+AGG | - | chr5.3:68102424-68102443 | MS.gene29733:intron | 45.0% | |
| TGTGATACCTACACTGTAGC+TGG | - | chr5.3:68103658-68103677 | MS.gene29733:intron | 45.0% | |
| TTGGGTGAGATTCTTGGGTT+GGG | - | chr5.3:68102314-68102333 | MS.gene29733:intron | 45.0% | |
| TTTGGGTGAGATTCTTGGGT+TGG | - | chr5.3:68102313-68102332 | MS.gene29733:intron | 45.0% | |
| ! | CACTTTTCATTCACCTTGGG+TGG | - | chr5.3:68102340-68102359 | MS.gene29733:intron | 45.0% |
| ! | CCTCCTGTTCGGGATTTTAT+TGG | - | chr5.3:68100913-68100932 | MS.gene29733:intron | 45.0% |
| ! | GCGAAGGGTTAAGTGCTTTT+GGG | - | chr5.3:68102296-68102315 | MS.gene29733:intron | 45.0% |
| ! | GGGATTTTATTGGGGCTCTA+AGG | - | chr5.3:68100923-68100942 | MS.gene29733:intron | 45.0% |
| ! | TACGTTTTCTGTTCGAGCAC+AGG | - | chr5.3:68099914-68099933 | MS.gene29733:intron | 45.0% |
| !! | AGGAATAGTGGTTCTGGGAT+TGG | + | chr5.3:68099856-68099875 | None:intergenic | 45.0% |
| !! | GAACAGGAGGTGCATTTTCA+AGG | + | chr5.3:68100903-68100922 | None:intergenic | 45.0% |
| !! | GAAGCCACAGTTGATGACTA+AGG | + | chr5.3:68103936-68103955 | None:intergenic | 45.0% |
| !! | GACTTGAGTTGGAGGAATAG+TGG | + | chr5.3:68099868-68099887 | None:intergenic | 45.0% |
| !! | GTGCTTTTGGGTGAGATTCT+TGG | - | chr5.3:68102308-68102327 | MS.gene29733:intron | 45.0% |
| !!! | TTTTATTGGGGCTCTAAGGG+CGG | - | chr5.3:68100927-68100946 | MS.gene29733:intron | 45.0% |
| !! | TAAATTTAAATTAAAATTAG+GGG | + | chr5.3:68104359-68104378 | None:intergenic | 5.0% |
| AAGCTTCTTGAAGGAGAGCG+AGG | - | chr5.3:68104008-68104027 | MS.gene29733:intron | 50.0% | |
| AATGAGGTTGCTGCTACCCA+AGG | - | chr5.3:68100612-68100631 | MS.gene29733:CDS | 50.0% | |
| ACACGCAACACGCTAAACAG+TGG | + | chr5.3:68101972-68101991 | None:intergenic | 50.0% | |
| AGCCACATCTGGTGAATCTG+TGG | - | chr5.3:68100545-68100564 | MS.gene29733:intron | 50.0% | |
| CAATCGAGCGTCATGCACAT+AGG | + | chr5.3:68103415-68103434 | None:intergenic | 50.0% | |
| CAATTCCGGTTGCAGAACGA+GGG | - | chr5.3:68100693-68100712 | MS.gene29733:intron | 50.0% | |
| CGGACCTTAGTCATCAACTG+TGG | - | chr5.3:68103929-68103948 | MS.gene29733:intron | 50.0% | |
| CTATGTGCATGACGCTCGAT+TGG | - | chr5.3:68103413-68103432 | MS.gene29733:CDS | 50.0% | |
| CTGGGATTGGAAGAGAACGA+AGG | + | chr5.3:68099843-68099862 | None:intergenic | 50.0% | |
| GCCCCAATAAAATCCCGAAC+AGG | + | chr5.3:68100919-68100938 | None:intergenic | 50.0% | |
| GCTCTAGCACTATAGGGTAG+TGG | - | chr5.3:68101184-68101203 | MS.gene29733:CDS | 50.0% | |
| GGCAGAGCCTAATGAAGGTT+CGG | - | chr5.3:68100515-68100534 | MS.gene29733:intron | 50.0% | |
| GGGCCTTCCTAACCATAAGA+AGG | + | chr5.3:68100882-68100901 | None:intergenic | 50.0% | |
| GGGTGGTGAGATCTCATTAG+AGG | - | chr5.3:68102357-68102376 | MS.gene29733:intron | 50.0% | |
| GGTGAGATCTCATTAGAGGG+AGG | - | chr5.3:68102361-68102380 | MS.gene29733:intron | 50.0% | |
| TCAATTCCGGTTGCAGAACG+AGG | - | chr5.3:68100692-68100711 | MS.gene29733:intron | 50.0% | |
| TCGGCTACAATAGCCACATC+TGG | - | chr5.3:68100534-68100553 | MS.gene29733:intron | 50.0% | |
| ! | GGCGAAGGGTTAAGTGCTTT+TGG | - | chr5.3:68102295-68102314 | MS.gene29733:intron | 50.0% |
| ! | TTTTCCCTGCCAAAACCGCA+AGG | - | chr5.3:68102109-68102128 | MS.gene29733:intron | 50.0% |
| !! | ATAGAGGGCGTTGAGCTCAT+TGG | - | chr5.3:68103839-68103858 | MS.gene29733:CDS | 50.0% |
| AGGGCGGCTAATGAACGAAC+TGG | - | chr5.3:68100943-68100962 | MS.gene29733:intron | 55.0% | |
| CAAGGACAAAGAAGTCGCGC+AGG | - | chr5.3:68100755-68100774 | MS.gene29733:intron | 55.0% | |
| CTCCTCTCTCCCCTAGATGT+AGG | - | chr5.3:68102616-68102635 | MS.gene29733:intron | 55.0% | |
| CTTGCACCCAGTGGACCATT+GGG | - | chr5.3:68102149-68102168 | MS.gene29733:intron | 55.0% | |
| GACCTACATCTAGGGGAGAG+AGG | + | chr5.3:68102621-68102640 | None:intergenic | 55.0% | |
| TGATTAGGGGGTCCAGTTGG+TGG | + | chr5.3:68100657-68100676 | None:intergenic | 55.0% | |
| !! | ATTCCGCAAGGCGTTGACAG+AGG | - | chr5.3:68102050-68102069 | MS.gene29733:intron | 55.0% |
| !! | TGGACTGGCAGCTCTTGTTG+AGG | - | chr5.3:68103365-68103384 | MS.gene29733:intron | 55.0% |
| !! | TTCCGCAAGGCGTTGACAGA+GGG | - | chr5.3:68102051-68102070 | MS.gene29733:intron | 55.0% |
| ACCCAGTGGACCATTGGGCA+GGG | - | chr5.3:68102154-68102173 | MS.gene29733:intron | 60.0% | |
| CCAATGGTCCACTGGGTGCA+AGG | + | chr5.3:68102151-68102170 | None:intergenic | 60.0% | |
| CCTTGCACCCAGTGGACCAT+TGG | - | chr5.3:68102148-68102167 | MS.gene29733:intron | 60.0% | |
| TCCCTGCCAAAACCGCAAGG+CGG | - | chr5.3:68102112-68102131 | MS.gene29733:intron | 60.0% | |
| !! | TCCGCAAGGCGTTGACAGAG+GGG | - | chr5.3:68102052-68102071 | MS.gene29733:intron | 60.0% |
| AAACCGCAAGGCGGCCTCAC+TGG | - | chr5.3:68102121-68102140 | MS.gene29733:intron | 65.0% | |
| AACCGCAAGGCGGCCTCACT+GGG | - | chr5.3:68102122-68102141 | MS.gene29733:intron | 65.0% | |
| ACCCCTGCCCAATGGTCCAC+TGG | + | chr5.3:68102159-68102178 | None:intergenic | 65.0% | |
| CACCCAGTGGACCATTGGGC+AGG | - | chr5.3:68102153-68102172 | MS.gene29733:intron | 65.0% | |
| CACCTTGCACCCCTGCCCAA+TGG | + | chr5.3:68102167-68102186 | None:intergenic | 65.0% | |
| CCCAGTGGACCATTGGGCAG+GGG | - | chr5.3:68102155-68102174 | MS.gene29733:intron | 65.0% | |
| CCCCTGCCCAATGGTCCACT+GGG | + | chr5.3:68102158-68102177 | None:intergenic | 65.0% | |
| GCCCCTCTGTCAACGCCTTG+CGG | + | chr5.3:68102056-68102075 | None:intergenic | 65.0% | |
| GGGTGCAAGGTGCAGGGACT+AGG | - | chr5.3:68102175-68102194 | MS.gene29733:intron | 65.0% | |
| ! | GACCATTGGGCAGGGGTGCA+AGG | - | chr5.3:68102162-68102181 | MS.gene29733:intron | 65.0% |
| ! | GTGAGGCCGCCTTGCGGTTT+TGG | + | chr5.3:68102121-68102140 | None:intergenic | 65.0% |
| !! | GCCGCCTTGCGGTTTTGGCA+GGG | + | chr5.3:68102116-68102135 | None:intergenic | 65.0% |
| ACCCCAGTGAGGCCGCCTTG+CGG | + | chr5.3:68102127-68102146 | None:intergenic | 70.0% | |
| ACCGCAAGGCGGCCTCACTG+GGG | - | chr5.3:68102123-68102142 | MS.gene29733:intron | 70.0% | |
| ! | CTGGGGTGCCTTGCACCCAG+TGG | - | chr5.3:68102140-68102159 | MS.gene29733:intron | 70.0% |
| ! | GGGCAGGGGTGCAAGGTGCA+GGG | - | chr5.3:68102169-68102188 | MS.gene29733:intron | 70.0% |
| ! | GGGTGCAAGGCACCCCAGTG+AGG | + | chr5.3:68102138-68102157 | None:intergenic | 70.0% |
| ! | TGGGCAGGGGTGCAAGGTGC+AGG | - | chr5.3:68102168-68102187 | MS.gene29733:intron | 70.0% |
| !! | GGCCGCCTTGCGGTTTTGGC+AGG | + | chr5.3:68102117-68102136 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 68099798 | 68104645 | 68099798 | ID=MS.gene29733 |
| chr5.3 | mRNA | 68099798 | 68104645 | 68099798 | ID=MS.gene29733.t1;Parent=MS.gene29733 |
| chr5.3 | exon | 68104508 | 68104645 | 68104508 | ID=MS.gene29733.t1.exon1;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68104508 | 68104645 | 68104508 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68103667 | 68103927 | 68103667 | ID=MS.gene29733.t1.exon2;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68103667 | 68103927 | 68103667 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68103405 | 68103581 | 68103405 | ID=MS.gene29733.t1.exon3;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68103405 | 68103581 | 68103405 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68101506 | 68101580 | 68101506 | ID=MS.gene29733.t1.exon4;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68101506 | 68101580 | 68101506 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68101324 | 68101368 | 68101324 | ID=MS.gene29733.t1.exon5;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68101324 | 68101368 | 68101324 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68101057 | 68101221 | 68101057 | ID=MS.gene29733.t1.exon6;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68101057 | 68101221 | 68101057 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68100562 | 68100640 | 68100562 | ID=MS.gene29733.t1.exon7;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68100562 | 68100640 | 68100562 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68100385 | 68100467 | 68100385 | ID=MS.gene29733.t1.exon8;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68100385 | 68100467 | 68100385 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68100225 | 68100293 | 68100225 | ID=MS.gene29733.t1.exon9;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68100225 | 68100293 | 68100225 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| chr5.3 | exon | 68099798 | 68099881 | 68099798 | ID=MS.gene29733.t1.exon10;Parent=MS.gene29733.t1 |
| chr5.3 | CDS | 68099798 | 68099881 | 68099798 | ID=cds.MS.gene29733.t1;Parent=MS.gene29733.t1 |
| Gene Sequence |
| Protein sequence |
