Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061224.t1 | XP_013458339.1 | 99.6 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 2.20E-278 | 967.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061224.t1 | P31023 | 96.4 | 502 | 17 | 1 | 1 | 502 | 1 | 501 | 4.1e-273 | 941.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061224.t1 | A0A072V2R0 | 99.6 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 1.6e-278 | 967.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057668 | MS.gene061224 | 0.810272 | 1.25E-50 | -1.69E-46 |
| MS.gene061224 | MS.gene26810 | 0.998606 | 2.96E-270 | -1.69E-46 |
| MS.gene061224 | MS.gene29733 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene061224 | MS.gene29734 | 0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene061224 | MS.gene44379 | 0.81739 | 3.38E-52 | -1.69E-46 |
| MS.gene061224 | MS.gene54216 | 0.804316 | 2.29E-49 | -1.69E-46 |
| MS.gene061224 | MS.gene68603 | 0.806826 | 6.81E-50 | -1.69E-46 |
| MS.gene061224 | MS.gene80271 | 0.833286 | 5.82E-56 | -1.69E-46 |
| MS.gene061224 | MS.gene81705 | 0.821584 | 3.74E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene67036 | MS.gene061224 | PPI |
| MS.gene061224 | MS.gene56014 | PPI |
| MS.gene061224 | MS.gene019928 | PPI |
| MS.gene061224 | MS.gene07846 | PPI |
| MS.gene058213 | MS.gene061224 | PPI |
| MS.gene74672 | MS.gene061224 | PPI |
| MS.gene26810 | MS.gene061224 | PPI |
| MS.gene061224 | MS.gene65292 | PPI |
| MS.gene011262 | MS.gene061224 | PPI |
| MS.gene030130 | MS.gene061224 | PPI |
| MS.gene042299 | MS.gene061224 | PPI |
| MS.gene00186 | MS.gene061224 | PPI |
| MS.gene061224 | MS.gene65554 | PPI |
| MS.gene68603 | MS.gene061224 | PPI |
| MS.gene061224 | MS.gene53350 | PPI |
| MS.gene061224 | MS.gene00186 | PPI |
| MS.gene052712 | MS.gene061224 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061224.t1 | MTR_4g123070 | 99.602 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1015 |
| MS.gene061224.t1 | MTR_2g034580 | 35.892 | 482 | 286 | 11 | 26 | 490 | 72 | 547 | 7.23e-76 | 249 |
| MS.gene061224.t1 | MTR_4g121880 | 35.388 | 503 | 294 | 11 | 5 | 490 | 56 | 544 | 8.07e-76 | 249 |
| MS.gene061224.t1 | MTR_2g034580 | 35.892 | 482 | 286 | 11 | 26 | 490 | 72 | 547 | 1.76e-75 | 249 |
| MS.gene061224.t1 | MTR_6g033515 | 31.263 | 467 | 285 | 10 | 40 | 486 | 26 | 476 | 4.16e-61 | 208 |
| MS.gene061224.t1 | MTR_6g033515 | 30.417 | 480 | 284 | 12 | 40 | 486 | 26 | 488 | 1.61e-56 | 196 |
| MS.gene061224.t1 | MTR_1g070505 | 27.959 | 490 | 320 | 11 | 15 | 486 | 47 | 521 | 8.04e-49 | 176 |
| MS.gene061224.t1 | MTR_0644s0030 | 30.105 | 382 | 256 | 8 | 31 | 409 | 296 | 669 | 1.02e-36 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061224.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene061224.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene061224.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene061224.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene061224.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene061224.t1 | AT3G17240 | 85.630 | 508 | 66 | 3 | 1 | 502 | 1 | 507 | 0.0 | 872 |
| MS.gene061224.t1 | AT3G17240 | 85.630 | 508 | 66 | 3 | 1 | 502 | 1 | 507 | 0.0 | 872 |
| MS.gene061224.t1 | AT3G16950 | 34.989 | 463 | 257 | 11 | 55 | 490 | 103 | 548 | 6.73e-73 | 241 |
| MS.gene061224.t1 | AT4G16155 | 35.637 | 463 | 253 | 12 | 55 | 490 | 101 | 545 | 6.92e-73 | 241 |
| MS.gene061224.t1 | AT3G16950 | 34.989 | 463 | 257 | 11 | 55 | 490 | 103 | 548 | 2.05e-72 | 241 |
| MS.gene061224.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene061224.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene061224.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene061224.t1 | AT3G54660 | 27.400 | 500 | 323 | 11 | 9 | 486 | 53 | 534 | 4.14e-43 | 161 |
| MS.gene061224.t1 | AT3G17240 | 73.196 | 97 | 19 | 3 | 1 | 91 | 1 | 96 | 3.19e-32 | 120 |
Find 158 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACTTCTGGACTTAATT+TGG | 0.142487 | 8.3:+5802861 | MS.gene061224:CDS |
| GTGGTTGGAGTTGATACTTC+TGG | 0.261463 | 8.3:+5802745 | MS.gene061224:CDS |
| CCCGATAACTACAAGCTTCT+TGG | 0.267642 | 8.3:-5802554 | None:intergenic |
| TGACAAGGTAGGACGCATTT+TGG | 0.289967 | 8.3:+5802903 | MS.gene061224:CDS |
| ACCAAGCTGAGCAGCTTTAA+TGG | 0.289980 | 8.3:-5800998 | None:intergenic |
| GGTAGGACTCCATTCACTTC+TGG | 0.310454 | 8.3:+5802850 | MS.gene061224:CDS |
| GACAACATCTGCTTCAATTA+TGG | 0.320224 | 8.3:-5802815 | None:intergenic |
| AAGAAAATTGTATCATCAAC+AGG | 0.323435 | 8.3:+5802508 | MS.gene061224:CDS |
| AGGTCAAGAGGTTTCGCTTC+CGG | 0.337458 | 8.3:+5800919 | MS.gene061224:CDS |
| TGTTGGGAAGTTCCCTTTCA+TGG | 0.353483 | 8.3:+5803161 | MS.gene061224:CDS |
| CCCAAGAAGCTTGTAGTTAT+CGG | 0.353692 | 8.3:+5802553 | MS.gene061224:CDS |
| AAAGGAGACGGACAAAATAT+TGG | 0.354741 | 8.3:+5803242 | MS.gene061224:CDS |
| GAGGAGCAGGTTAAGGAAAC+TGG | 0.355744 | 8.3:+5803126 | MS.gene061224:CDS |
| CAGGCTCTTCAAATGTGAAT+TGG | 0.356810 | 8.3:-5803423 | None:intergenic |
| AATTGCCTTCGCCCTGCTAT+TGG | 0.359778 | 8.3:-5803184 | None:intergenic |
| CCGATAACTACAAGCTTCTT+GGG | 0.373836 | 8.3:-5802553 | None:intergenic |
| TTAACAGCCTCACTCATTGT+TGG | 0.377486 | 8.3:-5803372 | None:intergenic |
| AAGGAGACGGACAAAATATT+GGG | 0.381037 | 8.3:+5803243 | MS.gene061224:CDS |
| GCAATTGGTGATGTAATTCC+CGG | 0.389033 | 8.3:+5802964 | MS.gene061224:CDS |
| ATGAATGAGTTCTCCTGCAT+TGG | 0.396625 | 8.3:-5803283 | None:intergenic |
| GGCTAGAGATGGGCTCTGTA+TGG | 0.404513 | 8.3:+5802590 | MS.gene061224:CDS |
| TCCCTTTCATGGCCAATAGC+AGG | 0.405072 | 8.3:+5803172 | MS.gene061224:CDS |
| TGTCAAGATAATTGCTGAAA+AGG | 0.408222 | 8.3:+5803224 | MS.gene061224:CDS |
| CCAAGAAGCTTGTAGTTATC+GGG | 0.414079 | 8.3:+5802554 | MS.gene061224:CDS |
| GGCTCTGTATGGGGACGAAT+TGG | 0.414655 | 8.3:+5802601 | MS.gene061224:CDS |
| TGGTTGGAGTTGATACTTCT+GGG | 0.417457 | 8.3:+5802746 | MS.gene061224:CDS |
| TCCGTTACACTTTCTCTCTA+AGG | 0.422319 | 8.3:+5800899 | MS.gene061224:CDS |
| GGACTTAATTTGGACAAGAT+AGG | 0.423938 | 8.3:+5802871 | MS.gene061224:CDS |
| GAAGACAGAGGAGCAGGTTA+AGG | 0.424716 | 8.3:+5803119 | MS.gene061224:CDS |
| GCTAGAGATGGGCTCTGTAT+GGG | 0.427257 | 8.3:+5802591 | MS.gene061224:CDS |
| GTCATCATCGGTGGTGGTCC+CGG | 0.435774 | 8.3:+5800961 | MS.gene061224:CDS |
| TGTTGAGTACTTAGCTGGTA+AGG | 0.436084 | 8.3:+5803029 | MS.gene061224:CDS |
| GCCATTAAAGCTGCTCAGCT+TGG | 0.436823 | 8.3:+5800997 | MS.gene061224:CDS |
| CTGGAGTTCAATACCGTGTT+GGG | 0.438229 | 8.3:+5803145 | MS.gene061224:CDS |
| AACGATGGCTATGGCGAACT+TGG | 0.445916 | 8.3:+5800834 | None:intergenic |
| GAGAACGCTGAAACTGCTTC+CGG | 0.449447 | 8.3:-5802684 | None:intergenic |
| AACATTCATTTGCCAACCAT+GGG | 0.450908 | 8.3:+5802224 | MS.gene061224:CDS |
| CTTCCGGATTTCTCCATCCA+TGG | 0.451603 | 8.3:-5802668 | None:intergenic |
| AATCGAAATGGAACCTTGGA+AGG | 0.456741 | 8.3:-5801087 | None:intergenic |
| GTCTGTTCACCACCAGCTGC+TGG | 0.459349 | 8.3:-5802793 | None:intergenic |
| AATCTGACCCGGGGTATTGA+AGG | 0.459866 | 8.3:+5802313 | MS.gene061224:CDS |
| TCTGCCTTGTGTGCCAACAT+TGG | 0.464020 | 8.3:-5802988 | None:intergenic |
| AGTACTTAGCTGGTAAGGTT+GGG | 0.465511 | 8.3:+5803034 | MS.gene061224:CDS |
| TTATCGGGGCAGGTTACATT+GGG | 0.466168 | 8.3:+5802569 | MS.gene061224:CDS |
| GCTTGTGTTGAGTACTTAGC+TGG | 0.469925 | 8.3:+5803024 | MS.gene061224:CDS |
| CGTTGGTTGCATCCCTTCCA+AGG | 0.471575 | 8.3:+5801074 | MS.gene061224:CDS |
| CATATTATGGCACCCAATGC+AGG | 0.471769 | 8.3:+5803270 | MS.gene061224:CDS |
| TTCCCTACAGAAGCAACCTC+GGG | 0.473270 | 8.3:-5803099 | None:intergenic |
| GGAGTTGATACTTCTGGGGA+TGG | 0.475245 | 8.3:+5802751 | MS.gene061224:CDS |
| CAAATGAATGTTTAGCCTCA+TGG | 0.478496 | 8.3:-5802213 | None:intergenic |
| TGAATGAGTTCTCCTGCATT+GGG | 0.481793 | 8.3:-5803282 | None:intergenic |
| GTTATCGGGGCAGGTTACAT+TGG | 0.485635 | 8.3:+5802568 | MS.gene061224:CDS |
| AGGTTACATTGGGCTAGAGA+TGG | 0.486720 | 8.3:+5802579 | MS.gene061224:CDS |
| GAGTACTTAGCTGGTAAGGT+TGG | 0.487434 | 8.3:+5803033 | MS.gene061224:CDS |
| CGGTCCAATGTTGGCACACA+AGG | 0.493606 | 8.3:+5802984 | MS.gene061224:CDS |
| GTCTCGGGTGTCTATGCAAT+TGG | 0.495457 | 8.3:+5802949 | MS.gene061224:CDS |
| GGCGAACTTGGCTCGTAGGA+AGG | 0.497240 | 8.3:+5800846 | MS.gene061224:CDS |
| CCCTGCTATTGGCCATGAAA+GGG | 0.502849 | 8.3:-5803173 | None:intergenic |
| ATCGAAAAGCGTGGTGCTCT+TGG | 0.503316 | 8.3:+5801036 | MS.gene061224:CDS |
| ATAGACACCCGAGACATTTG+TGG | 0.506046 | 8.3:-5802941 | None:intergenic |
| ACCCCGAGGTTGCTTCTGTA+GGG | 0.507942 | 8.3:+5803097 | MS.gene061224:CDS |
| TGTAGGGAAGACAGAGGAGC+AGG | 0.508653 | 8.3:+5803113 | MS.gene061224:CDS |
| GGGTTCCGCTCTTCTTTCAT+CGG | 0.511274 | 8.3:+5800867 | MS.gene061224:CDS |
| GATGTTGTCCTTGTATCTGC+TGG | 0.512028 | 8.3:+5802829 | MS.gene061224:CDS |
| GCCCTGCTATTGGCCATGAA+AGG | 0.515476 | 8.3:-5803174 | None:intergenic |
| CGGATTTCTCCATCCATGGA+TGG | 0.518110 | 8.3:-5802664 | None:intergenic |
| GAAAACGACGTCGTCATCAT+CGG | 0.520382 | 8.3:+5800949 | MS.gene061224:CDS |
| CTAGAGATGGGCTCTGTATG+GGG | 0.523383 | 8.3:+5802592 | MS.gene061224:CDS |
| CATCCATGGATGGAGAAATC+CGG | 0.523667 | 8.3:+5802665 | MS.gene061224:CDS |
| GTAACATATGTCAAAGGATA+CGG | 0.525267 | 8.3:+5802355 | MS.gene061224:CDS |
| CAGCGTTCTCTTGAAAAGCA+AGG | 0.526866 | 8.3:+5802697 | MS.gene061224:CDS |
| GCACACAAGGCAGAAGAAGA+TGG | 0.528923 | 8.3:+5802997 | MS.gene061224:CDS |
| CCCTTTCATGGCCAATAGCA+GGG | 0.531192 | 8.3:+5803173 | MS.gene061224:CDS |
| CATTTGAAACTTTGACCCCA+TGG | 0.533125 | 8.3:-5802240 | None:intergenic |
| GAAAAGCGTGGTGCTCTTGG+TGG | 0.534842 | 8.3:+5801039 | MS.gene061224:CDS |
| TGAAACTTTGACCCCATGGT+TGG | 0.535838 | 8.3:-5802236 | None:intergenic |
| AAGCTTGTAGTTATCGGGGC+AGG | 0.538965 | 8.3:+5802559 | MS.gene061224:CDS |
| ATCGCAGATTGTTCCATCCA+TGG | 0.542630 | 8.3:+5802651 | MS.gene061224:CDS |
| AGCTGGTAAGGTTGGGCATG+TGG | 0.543166 | 8.3:+5803041 | MS.gene061224:CDS |
| CTTCCCTACAGAAGCAACCT+CGG | 0.546875 | 8.3:-5803100 | None:intergenic |
| GGTTACATTGGGCTAGAGAT+GGG | 0.547643 | 8.3:+5802580 | MS.gene061224:CDS |
| AAAATTCCTTTCACCATCTG+AGG | 0.547911 | 8.3:+5802378 | MS.gene061224:CDS |
| AAACATTCATTTGCCAACCA+TGG | 0.549901 | 8.3:+5802223 | MS.gene061224:CDS |
| CTAACTGTTGAACCAGCAGC+TGG | 0.550199 | 8.3:+5802781 | MS.gene061224:CDS |
| AATGGCGGCGACGTAACCGC+CGG | 0.551240 | 8.3:-5800980 | None:intergenic |
| GATGCAACCAACGTTGAGAC+AGG | 0.551664 | 8.3:-5801064 | None:intergenic |
| AAGCTGTTTCTAATCTGACC+CGG | 0.552292 | 8.3:+5802302 | MS.gene061224:CDS |
| CTATGGCGAACTTGGCTCGT+AGG | 0.555334 | 8.3:+5800842 | MS.gene061224:CDS |
| GAGTCCTACCAGCAGATACA+AGG | 0.558562 | 8.3:-5802837 | None:intergenic |
| GTCTCTGTAGACACCGTTGA+AGG | 0.558670 | 8.3:+5802400 | MS.gene061224:CDS |
| AAGCTGAATACCAAGGTGGT+TGG | 0.558857 | 8.3:+5802730 | MS.gene061224:CDS |
| GCGAACTTGGCTCGTAGGAA+GGG | 0.560636 | 8.3:+5800847 | MS.gene061224:CDS |
| TTGTCCTTGTATCTGCTGGT+AGG | 0.563808 | 8.3:+5802833 | MS.gene061224:CDS |
| GATTGACTTAGCTGCCATGA+TGG | 0.564118 | 8.3:+5802267 | MS.gene061224:CDS |
| ATGGCGGCGACGTAACCGCC+GGG | 0.564412 | 8.3:-5800979 | None:intergenic |
| AACCCCGAGGTTGCTTCTGT+AGG | 0.567406 | 8.3:+5803096 | MS.gene061224:CDS |
| AAGAATCTTAACGATGGCTA+TGG | 0.567804 | 8.3:+5800825 | None:intergenic |
| AAATTAAGTCCAGAAGTGAA+TGG | 0.568714 | 8.3:-5802859 | None:intergenic |
| AAATAGGCCTTCAATACCCC+GGG | 0.569237 | 8.3:-5802320 | None:intergenic |
| TGTAATTCCCGGTCCAATGT+TGG | 0.569254 | 8.3:+5802975 | MS.gene061224:CDS |
| ACTTTCTCTCTAAGGTCAAG+AGG | 0.569811 | 8.3:+5800907 | MS.gene061224:CDS |
| GTTTAGCCTCATGGTACATG+TGG | 0.570391 | 8.3:-5802204 | None:intergenic |
| AGCTGTTTCTAATCTGACCC+GGG | 0.571089 | 8.3:+5802303 | MS.gene061224:CDS |
| TAAATAGGCCTTCAATACCC+CGG | 0.573925 | 8.3:-5802321 | None:intergenic |
| CAGATTGTTCCATCCATGGA+TGG | 0.574676 | 8.3:+5802655 | MS.gene061224:CDS |
| GGCTGTTAAAGAAGCCGCAA+TGG | 0.578312 | 8.3:+5803386 | MS.gene061224:CDS |
| GACGTCGTCATCATCGGTGG+TGG | 0.579886 | 8.3:+5800955 | MS.gene061224:CDS |
| CAGAGACCTCAGATGGTGAA+AGG | 0.580741 | 8.3:-5802384 | None:intergenic |
| CTTGTGTGCCAACATTGGAC+CGG | 0.581579 | 8.3:-5802983 | None:intergenic |
| ACTGGAGTTCAATACCGTGT+TGG | 0.590339 | 8.3:+5803144 | MS.gene061224:CDS |
| AACAAGGTAACATATGTCAA+AGG | 0.591345 | 8.3:+5802349 | MS.gene061224:CDS |
| AAGCATATCATTATAGCCAC+CGG | 0.595212 | 8.3:+5802445 | MS.gene061224:CDS |
| TTCCGCTCTTCTTTCATCGG+CGG | 0.602872 | 8.3:+5800870 | MS.gene061224:CDS |
| GTGAATTGGCTTGTCATAAG+TGG | 0.602908 | 8.3:-5803409 | None:intergenic |
| GTGGACTATGACAAAGTACC+AGG | 0.603832 | 8.3:+5803060 | MS.gene061224:CDS |
| GGTGAAAATACTGTTGTGAA+AGG | 0.605474 | 8.3:+5802421 | MS.gene061224:CDS |
| CATGGCCAATAGCAGGGCGA+AGG | 0.605899 | 8.3:+5803179 | MS.gene061224:CDS |
| CGATAACTACAAGCTTCTTG+GGG | 0.608524 | 8.3:-5802552 | None:intergenic |
| GGTTGGAGTTGATACTTCTG+GGG | 0.615833 | 8.3:+5802747 | MS.gene061224:CDS |
| GATAATTGCTGAAAAGGAGA+CGG | 0.617580 | 8.3:+5803230 | MS.gene061224:CDS |
| GGTGGTACCTGTCTCAACGT+TGG | 0.621896 | 8.3:+5801057 | MS.gene061224:CDS |
| AGTATCAACTCCAACCACCT+TGG | 0.623456 | 8.3:-5802740 | None:intergenic |
| ATGGGGACGAATTGGCTCTG+AGG | 0.627284 | 8.3:+5802609 | MS.gene061224:CDS |
| ACCTTAGAGAGAAAGTGTAA+CGG | 0.630266 | 8.3:-5800900 | None:intergenic |
| AAGGCAATTGATAACGCTGA+AGG | 0.632613 | 8.3:+5803198 | MS.gene061224:CDS |
| TTGTGTGCCAACATTGGACC+GGG | 0.636415 | 8.3:-5802982 | None:intergenic |
| GGAGTTGAAACTGACAAGGT+AGG | 0.637183 | 8.3:+5802892 | MS.gene061224:CDS |
| TGGGGTCAAAGTTTCAAATG+TGG | 0.638191 | 8.3:+5802243 | MS.gene061224:CDS |
| TCAGATGTAAAATCTCTACC+TGG | 0.641837 | 8.3:+5802469 | MS.gene061224:CDS |
| GGGTTTGTATAGACAACACC+TGG | 0.647094 | 8.3:-5803078 | None:intergenic |
| AGAAAATTGTATCATCAACA+GGG | 0.647191 | 8.3:+5802509 | MS.gene061224:CDS |
| GTGTCTACAGAGACCTCAGA+TGG | 0.651528 | 8.3:-5802391 | None:intergenic |
| CAAGAAGCTTGTAGTTATCG+GGG | 0.654159 | 8.3:+5802555 | MS.gene061224:CDS |
| AACGACGTCGTCATCATCGG+TGG | 0.658246 | 8.3:+5800952 | MS.gene061224:CDS |
| TGCACATCCAACAATGAGTG+AGG | 0.658611 | 8.3:+5803365 | MS.gene061224:CDS |
| TTTAGCCTCATGGTACATGT+GGG | 0.660235 | 8.3:-5802203 | None:intergenic |
| AGGAGACGGACAAAATATTG+GGG | 0.662760 | 8.3:+5803244 | MS.gene061224:CDS |
| GCAGTATGATGCATCAAGTG+AGG | 0.668547 | 8.3:+5803323 | MS.gene061224:CDS |
| GCTGTTTCTAATCTGACCCG+GGG | 0.668806 | 8.3:+5802304 | MS.gene061224:CDS |
| TGAAAGGGAACTTCCCAACA+CGG | 0.669482 | 8.3:-5803158 | None:intergenic |
| ATCGAAATGGAACCTTGGAA+GGG | 0.671194 | 8.3:-5801086 | None:intergenic |
| ACCACTTGCATCGAAAAGCG+TGG | 0.672031 | 8.3:+5801027 | MS.gene061224:CDS |
| CTCCGCCGATGAAAGAAGAG+CGG | 0.675152 | 8.3:-5800872 | None:intergenic |
| GAAATTCAAGCTGAATACCA+AGG | 0.679504 | 8.3:+5802723 | MS.gene061224:CDS |
| GAAAATTGTATCATCAACAG+GGG | 0.680955 | 8.3:+5802510 | MS.gene061224:CDS |
| GGAGACGGACAAAATATTGG+GGG | 0.685454 | 8.3:+5803245 | MS.gene061224:CDS |
| CTTGTCATAAGTGGCCATTG+CGG | 0.687064 | 8.3:-5803400 | None:intergenic |
| TGCATCATACTGCAATGCAA+TGG | 0.690908 | 8.3:-5803313 | None:intergenic |
| TCCCTACAGAAGCAACCTCG+GGG | 0.694823 | 8.3:-5803098 | None:intergenic |
| AAGCTGAGCAGCTTTAATGG+CGG | 0.697561 | 8.3:-5800995 | None:intergenic |
| ACTGTTGAACCAGCAGCTGG+TGG | 0.697745 | 8.3:+5802784 | MS.gene061224:CDS |
| ACATTCATTTGCCAACCATG+GGG | 0.697828 | 8.3:+5802225 | MS.gene061224:CDS |
| GATAGGAGTTGAAACTGACA+AGG | 0.698372 | 8.3:+5802888 | MS.gene061224:CDS |
| ATCATCGGTGGTGGTCCCGG+CGG | 0.698397 | 8.3:+5800964 | MS.gene061224:CDS |
| TGCTTCTGTAGGGAAGACAG+AGG | 0.698830 | 8.3:+5803107 | MS.gene061224:CDS |
| TTCTTCCCACATGTACCATG+AGG | 0.705759 | 8.3:+5802198 | MS.gene061224:CDS |
| ATTCAAGCTGAATACCAAGG+TGG | 0.721568 | 8.3:+5802726 | MS.gene061224:CDS |
| TGTTGTCTATACAAACCCCG+AGG | 0.780319 | 8.3:+5803083 | MS.gene061224:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACTATTAAAATAATACA+TGG | - | chr8.3:5802139-5802158 | None:intergenic | 10.0% |
| !! | TTACTATTAAAATAATACAT+GGG | - | chr8.3:5802138-5802157 | None:intergenic | 10.0% |
| !! | AAATTGTATGTTAAATGATA+TGG | + | chr8.3:5802015-5802034 | MS.gene061224:intron | 15.0% |
| !! | AGCATATTATATTAAATCAT+TGG | + | chr8.3:5801948-5801967 | MS.gene061224:intron | 15.0% |
| !! | ATATCATTTAACATACAATT+TGG | - | chr8.3:5802016-5802035 | None:intergenic | 15.0% |
| !! | CTAAAACAAAAGATAAAATA+AGG | + | chr8.3:5801472-5801491 | MS.gene061224:intron | 15.0% |
| !! | TACTATTAAAATAATACATG+GGG | - | chr8.3:5802137-5802156 | None:intergenic | 15.0% |
| !!! | TTTTTAATTGATTAAGTTGA+AGG | + | chr8.3:5801197-5801216 | MS.gene061224:intron | 15.0% |
| !!! | TTTTTGTTATTTTCGATTTT+TGG | + | chr8.3:5801228-5801247 | MS.gene061224:intron | 15.0% |
| !! | AATTAAAAAATACTTGACAC+AGG | - | chr8.3:5801845-5801864 | None:intergenic | 20.0% |
| !! | CTATATGAGAAAAAATGAAT+AGG | - | chr8.3:5801129-5801148 | None:intergenic | 20.0% |
| !!! | TTACCTTGTTTTTCTTAAAT+AGG | - | chr8.3:5802339-5802358 | None:intergenic | 20.0% |
| ! | AAGAAAATTGTATCATCAAC+AGG | + | chr8.3:5802508-5802527 | MS.gene061224:CDS | 25.0% |
| ! | ACATTCAATTCGTTAATCAA+CGG | - | chr8.3:5801918-5801937 | None:intergenic | 25.0% |
| ! | AGAAAATTGTATCATCAACA+GGG | + | chr8.3:5802509-5802528 | MS.gene061224:CDS | 25.0% |
| ! | AGAGAGTAAACATATTGTTA+TGG | + | chr8.3:5801891-5801910 | MS.gene061224:intron | 25.0% |
| ! | ATTATTAGATTTAGCTGGAT+GGG | + | chr8.3:5801702-5801721 | MS.gene061224:intron | 25.0% |
| ! | TTCTCATATAGATATAGATG+TGG | + | chr8.3:5801138-5801157 | MS.gene061224:intron | 25.0% |
| !! | TGTTTATATTTCTGTGTCTT+TGG | + | chr8.3:5801312-5801331 | MS.gene061224:intron | 25.0% |
| !!! | TCTTTTTTAAAGTCTACTCT+TGG | + | chr8.3:5801816-5801835 | MS.gene061224:intron | 25.0% |
| AAATTAAGTCCAGAAGTGAA+TGG | - | chr8.3:5802862-5802881 | None:intergenic | 30.0% | |
| AACAAGGTAACATATGTCAA+AGG | + | chr8.3:5802349-5802368 | MS.gene061224:CDS | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr8.3:5801557-5801576 | MS.gene061224:intron | 30.0% | |
| AGGCCTATTTAAGAAAAACA+AGG | + | chr8.3:5802333-5802352 | MS.gene061224:CDS | 30.0% | |
| AGTAGAAAAGTGAATCGAAA+TGG | - | chr8.3:5801102-5801121 | None:intergenic | 30.0% | |
| ATGAATAGCGCTTATGTATA+AGG | + | chr8.3:5801444-5801463 | MS.gene061224:intron | 30.0% | |
| ATGTTTACTCTCTAACATCT+GGG | - | chr8.3:5801884-5801903 | None:intergenic | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+AGG | - | chr8.3:5801407-5801426 | None:intergenic | 30.0% | |
| ATTCACTTCTGGACTTAATT+TGG | + | chr8.3:5802861-5802880 | MS.gene061224:CDS | 30.0% | |
| GAAAATTGTATCATCAACAG+GGG | + | chr8.3:5802510-5802529 | MS.gene061224:CDS | 30.0% | |
| GATTATTAGATTTAGCTGGA+TGG | + | chr8.3:5801701-5801720 | MS.gene061224:intron | 30.0% | |
| GTAACATATGTCAAAGGATA+CGG | + | chr8.3:5802355-5802374 | MS.gene061224:CDS | 30.0% | |
| GTATGTTAAATGATATGGTC+TGG | + | chr8.3:5802020-5802039 | MS.gene061224:intron | 30.0% | |
| TATGTTTACTCTCTAACATC+TGG | - | chr8.3:5801885-5801904 | None:intergenic | 30.0% | |
| TCCAGCTAAATCTAATAATC+CGG | - | chr8.3:5801701-5801720 | None:intergenic | 30.0% | |
| TGTCAAGATAATTGCTGAAA+AGG | + | chr8.3:5803224-5803243 | MS.gene061224:CDS | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | - | chr8.3:5801406-5801425 | None:intergenic | 30.0% | |
| ! | AACAGTATTTTCACCTTCAA+CGG | - | chr8.3:5802416-5802435 | None:intergenic | 30.0% |
| ! | ACTCTTGATTTTCTCACTTT+AGG | + | chr8.3:5801986-5802005 | MS.gene061224:intron | 30.0% |
| ! | CTCTTGATTTTCTCACTTTA+GGG | + | chr8.3:5801987-5802006 | MS.gene061224:intron | 30.0% |
| ! | TAAATGATATGGTCTGGAAT+TGG | + | chr8.3:5802026-5802045 | MS.gene061224:intron | 30.0% |
| ! | TAACTTTTCGTAGAGTCATT+TGG | + | chr8.3:5801781-5801800 | MS.gene061224:intron | 30.0% |
| ! | TAGAGATTTTACATCTGAAC+CGG | - | chr8.3:5802467-5802486 | None:intergenic | 30.0% |
| ! | TCTTGATTTTCTCACTTTAG+GGG | + | chr8.3:5801988-5802007 | MS.gene061224:intron | 30.0% |
| !! | CTTTGATTTTGGATGAACAT+CGG | + | chr8.3:5801288-5801307 | MS.gene061224:intron | 30.0% |
| AAAACCATATTCCACTAGGT+GGG | - | chr8.3:5802094-5802113 | None:intergenic | 35.0% | |
| AAAATTCCTTTCACCATCTG+AGG | + | chr8.3:5802378-5802397 | MS.gene061224:CDS | 35.0% | |
| AAACATTCATTTGCCAACCA+TGG | + | chr8.3:5802223-5802242 | MS.gene061224:CDS | 35.0% | |
| AAAGGAGACGGACAAAATAT+TGG | + | chr8.3:5803242-5803261 | MS.gene061224:CDS | 35.0% | |
| AACATTCATTTGCCAACCAT+GGG | + | chr8.3:5802224-5802243 | MS.gene061224:CDS | 35.0% | |
| AACCAAAACCATATTCCACT+AGG | - | chr8.3:5802098-5802117 | None:intergenic | 35.0% | |
| AAGCATATCATTATAGCCAC+CGG | + | chr8.3:5802445-5802464 | MS.gene061224:CDS | 35.0% | |
| AAGGAGACGGACAAAATATT+GGG | + | chr8.3:5803243-5803262 | MS.gene061224:CDS | 35.0% | |
| ACCGGATTATTAGATTTAGC+TGG | + | chr8.3:5801697-5801716 | MS.gene061224:intron | 35.0% | |
| CAAATGAATGTTTAGCCTCA+TGG | - | chr8.3:5802216-5802235 | None:intergenic | 35.0% | |
| GAAATTCAAGCTGAATACCA+AGG | + | chr8.3:5802723-5802742 | MS.gene061224:CDS | 35.0% | |
| GACAACATCTGCTTCAATTA+TGG | - | chr8.3:5802818-5802837 | None:intergenic | 35.0% | |
| GATAATTGCTGAAAAGGAGA+CGG | + | chr8.3:5803230-5803249 | MS.gene061224:CDS | 35.0% | |
| GGTGAAAATACTGTTGTGAA+AGG | + | chr8.3:5802421-5802440 | MS.gene061224:CDS | 35.0% | |
| TCAGATGTAAAATCTCTACC+TGG | + | chr8.3:5802469-5802488 | MS.gene061224:CDS | 35.0% | |
| TCTTGATTTAATGCCCTGTT+TGG | + | chr8.3:5801390-5801409 | MS.gene061224:intron | 35.0% | |
| TTGTGTTGCCTTCATATTTC+AGG | + | chr8.3:5802165-5802184 | MS.gene061224:intron | 35.0% | |
| ! | AAGGTTTTCCACAAATGTCT+CGG | + | chr8.3:5802933-5802952 | MS.gene061224:CDS | 35.0% |
| ! | AATATTGGGGGTGCATATTA+TGG | + | chr8.3:5803257-5803276 | MS.gene061224:CDS | 35.0% |
| ! | ACCTTAGAGAGAAAGTGTAA+CGG | - | chr8.3:5800903-5800922 | None:intergenic | 35.0% |
| ! | GGACTTAATTTGGACAAGAT+AGG | + | chr8.3:5802871-5802890 | MS.gene061224:CDS | 35.0% |
| !! | GACGCATTTTGGTAAATGAA+AGG | + | chr8.3:5802914-5802933 | MS.gene061224:CDS | 35.0% |
| !!! | CAAGTTAGTTTTTTCTGCTG+AGG | + | chr8.3:5801256-5801275 | MS.gene061224:intron | 35.0% |
| AAAACACTTGCGAGACTGTT+TGG | - | chr8.3:5801613-5801632 | None:intergenic | 40.0% | |
| AAACACTTGCGAGACTGTTT+GGG | - | chr8.3:5801612-5801631 | None:intergenic | 40.0% | |
| AAACCATATTCCACTAGGTG+GGG | - | chr8.3:5802093-5802112 | None:intergenic | 40.0% | |
| AAGCTGTCATGGAGAACTTA+TGG | + | chr8.3:5801533-5801552 | MS.gene061224:intron | 40.0% | |
| AATCGAAATGGAACCTTGGA+AGG | - | chr8.3:5801090-5801109 | None:intergenic | 40.0% | |
| ACATTCATTTGCCAACCATG+GGG | + | chr8.3:5802225-5802244 | MS.gene061224:CDS | 40.0% | |
| AGGAGACGGACAAAATATTG+GGG | + | chr8.3:5803244-5803263 | MS.gene061224:CDS | 40.0% | |
| AGTACTTAGCTGGTAAGGTT+GGG | + | chr8.3:5803034-5803053 | MS.gene061224:CDS | 40.0% | |
| AGTGAATCGAAATGGAACCT+TGG | - | chr8.3:5801094-5801113 | None:intergenic | 40.0% | |
| ATCGAAATGGAACCTTGGAA+GGG | - | chr8.3:5801089-5801108 | None:intergenic | 40.0% | |
| ATGAATGAGTTCTCCTGCAT+TGG | - | chr8.3:5803286-5803305 | None:intergenic | 40.0% | |
| ATTCAAGCTGAATACCAAGG+TGG | + | chr8.3:5802726-5802745 | MS.gene061224:CDS | 40.0% | |
| CAAAACCATATTCCACTAGG+TGG | - | chr8.3:5802095-5802114 | None:intergenic | 40.0% | |
| CAAGAAGCTTGTAGTTATCG+GGG | + | chr8.3:5802555-5802574 | MS.gene061224:CDS | 40.0% | |
| CCAAGAAGCTTGTAGTTATC+GGG | + | chr8.3:5802554-5802573 | MS.gene061224:CDS | 40.0% | |
| CCCAAGAAGCTTGTAGTTAT+CGG | + | chr8.3:5802553-5802572 | MS.gene061224:CDS | 40.0% | |
| CCGATAACTACAAGCTTCTT+GGG | - | chr8.3:5802556-5802575 | None:intergenic | 40.0% | |
| CGATAACTACAAGCTTCTTG+GGG | - | chr8.3:5802555-5802574 | None:intergenic | 40.0% | |
| GATAGGAGTTGAAACTGACA+AGG | + | chr8.3:5802888-5802907 | MS.gene061224:CDS | 40.0% | |
| TAAATAGGCCTTCAATACCC+CGG | - | chr8.3:5802324-5802343 | None:intergenic | 40.0% | |
| TCCGTTACACTTTCTCTCTA+AGG | + | chr8.3:5800899-5800918 | MS.gene061224:CDS | 40.0% | |
| TGAATGAGTTCTCCTGCATT+GGG | - | chr8.3:5803285-5803304 | None:intergenic | 40.0% | |
| TGCATCATACTGCAATGCAA+TGG | - | chr8.3:5803316-5803335 | None:intergenic | 40.0% | |
| TGGGGTCAAAGTTTCAAATG+TGG | + | chr8.3:5802243-5802262 | MS.gene061224:CDS | 40.0% | |
| TGTTGAGTACTTAGCTGGTA+AGG | + | chr8.3:5803029-5803048 | MS.gene061224:CDS | 40.0% | |
| TTAACAGCCTCACTCATTGT+TGG | - | chr8.3:5803375-5803394 | None:intergenic | 40.0% | |
| TTTAGCCTCATGGTACATGT+GGG | - | chr8.3:5802206-5802225 | None:intergenic | 40.0% | |
| ! | AGATTTTACATCTGAACCGG+TGG | - | chr8.3:5802464-5802483 | None:intergenic | 40.0% |
| ! | AGGTTTTCCACAAATGTCTC+GGG | + | chr8.3:5802934-5802953 | MS.gene061224:CDS | 40.0% |
| ! | CACCTAGTGGAATATGGTTT+TGG | + | chr8.3:5802093-5802112 | MS.gene061224:intron | 40.0% |
| ! | CATTTGAAACTTTGACCCCA+TGG | - | chr8.3:5802243-5802262 | None:intergenic | 40.0% |
| ! | TTTGTCTTTTTGCGCCATCA+TGG | - | chr8.3:5802284-5802303 | None:intergenic | 40.0% |
| ! | TTTTCATCAATAGTGACGCC+AGG | - | chr8.3:5802490-5802509 | None:intergenic | 40.0% |
| !! | AAGCTGTTTCTAATCTGACC+CGG | + | chr8.3:5802302-5802321 | MS.gene061224:CDS | 40.0% |
| !! | AAGGCAATTGATAACGCTGA+AGG | + | chr8.3:5803198-5803217 | MS.gene061224:CDS | 40.0% |
| !! | ACTTTCTCTCTAAGGTCAAG+AGG | + | chr8.3:5800907-5800926 | MS.gene061224:CDS | 40.0% |
| !! | CAAAAGCGCCTGAAATATGA+AGG | - | chr8.3:5802176-5802195 | None:intergenic | 40.0% |
| !! | GCAATTGGTGATGTAATTCC+CGG | + | chr8.3:5802964-5802983 | MS.gene061224:CDS | 40.0% |
| !! | GCTGTTTTCTTAAGCTGTCA+TGG | + | chr8.3:5801522-5801541 | MS.gene061224:intron | 40.0% |
| !! | GTGAATTGGCTTGTCATAAG+TGG | - | chr8.3:5803412-5803431 | None:intergenic | 40.0% |
| !! | TGGTTGGAGTTGATACTTCT+GGG | + | chr8.3:5802746-5802765 | MS.gene061224:CDS | 40.0% |
| !!! | GGTGGAGAGTACTTTGATTT+TGG | + | chr8.3:5801277-5801296 | MS.gene061224:intron | 40.0% |
| !!! | GTTAGTTTTTTCTGCTGAGG+TGG | + | chr8.3:5801259-5801278 | MS.gene061224:intron | 40.0% |
| AAATAGGCCTTCAATACCCC+GGG | - | chr8.3:5802323-5802342 | None:intergenic | 45.0% | |
| AAGCTGAATACCAAGGTGGT+TGG | + | chr8.3:5802730-5802749 | MS.gene061224:CDS | 45.0% | |
| ACTGGAGTTCAATACCGTGT+TGG | + | chr8.3:5803144-5803163 | MS.gene061224:CDS | 45.0% | |
| AGACAAGCGCTTAGACATGA+AGG | - | chr8.3:5801675-5801694 | None:intergenic | 45.0% | |
| AGTATCAACTCCAACCACCT+TGG | - | chr8.3:5802743-5802762 | None:intergenic | 45.0% | |
| ATAGACACCCGAGACATTTG+TGG | - | chr8.3:5802944-5802963 | None:intergenic | 45.0% | |
| ATCGCAGATTGTTCCATCCA+TGG | + | chr8.3:5802651-5802670 | MS.gene061224:CDS | 45.0% | |
| CAGATTGTTCCATCCATGGA+TGG | + | chr8.3:5802655-5802674 | MS.gene061224:CDS | 45.0% | |
| CAGCGTTCTCTTGAAAAGCA+AGG | + | chr8.3:5802697-5802716 | MS.gene061224:CDS | 45.0% | |
| CATATTATGGCACCCAATGC+AGG | + | chr8.3:5803270-5803289 | MS.gene061224:CDS | 45.0% | |
| CATCCATGGATGGAGAAATC+CGG | + | chr8.3:5802665-5802684 | MS.gene061224:CDS | 45.0% | |
| CCCGATAACTACAAGCTTCT+TGG | - | chr8.3:5802557-5802576 | None:intergenic | 45.0% | |
| CTGGAGTTCAATACCGTGTT+GGG | + | chr8.3:5803145-5803164 | MS.gene061224:CDS | 45.0% | |
| CTTGTCATAAGTGGCCATTG+CGG | - | chr8.3:5803403-5803422 | None:intergenic | 45.0% | |
| GAAAACGACGTCGTCATCAT+CGG | + | chr8.3:5800949-5800968 | MS.gene061224:CDS | 45.0% | |
| GACAAGCGCTTAGACATGAA+GGG | - | chr8.3:5801674-5801693 | None:intergenic | 45.0% | |
| GAGTACTTAGCTGGTAAGGT+TGG | + | chr8.3:5803033-5803052 | MS.gene061224:CDS | 45.0% | |
| GATGTTGTCCTTGTATCTGC+TGG | + | chr8.3:5802829-5802848 | MS.gene061224:CDS | 45.0% | |
| GCAGTATGATGCATCAAGTG+AGG | + | chr8.3:5803323-5803342 | MS.gene061224:CDS | 45.0% | |
| GCTTGTGTTGAGTACTTAGC+TGG | + | chr8.3:5803024-5803043 | MS.gene061224:CDS | 45.0% | |
| GGAGACGGACAAAATATTGG+GGG | + | chr8.3:5803245-5803264 | MS.gene061224:CDS | 45.0% | |
| GGAGTTGAAACTGACAAGGT+AGG | + | chr8.3:5802892-5802911 | MS.gene061224:CDS | 45.0% | |
| GGGTTTGTATAGACAACACC+TGG | - | chr8.3:5803081-5803100 | None:intergenic | 45.0% | |
| GTCTAAGCGCTTGTCTTAAC+CGG | + | chr8.3:5801679-5801698 | MS.gene061224:intron | 45.0% | |
| GTTTAGCCTCATGGTACATG+TGG | - | chr8.3:5802207-5802226 | None:intergenic | 45.0% | |
| TGAAACTTTGACCCCATGGT+TGG | - | chr8.3:5802239-5802258 | None:intergenic | 45.0% | |
| TGAAAGGGAACTTCCCAACA+CGG | - | chr8.3:5803161-5803180 | None:intergenic | 45.0% | |
| TGCACATCCAACAATGAGTG+AGG | + | chr8.3:5803365-5803384 | MS.gene061224:CDS | 45.0% | |
| TGTAATTCCCGGTCCAATGT+TGG | + | chr8.3:5802975-5802994 | MS.gene061224:CDS | 45.0% | |
| TGTTGGGAAGTTCCCTTTCA+TGG | + | chr8.3:5803161-5803180 | MS.gene061224:CDS | 45.0% | |
| TGTTGTCTATACAAACCCCG+AGG | + | chr8.3:5803083-5803102 | MS.gene061224:CDS | 45.0% | |
| TTATCGGGGCAGGTTACATT+GGG | + | chr8.3:5802569-5802588 | MS.gene061224:CDS | 45.0% | |
| TTCTTCCCACATGTACCATG+AGG | + | chr8.3:5802198-5802217 | MS.gene061224:CDS | 45.0% | |
| TTGTCCTTGTATCTGCTGGT+AGG | + | chr8.3:5802833-5802852 | MS.gene061224:CDS | 45.0% | |
| ! | AAGCTGAGCAGCTTTAATGG+CGG | - | chr8.3:5800998-5801017 | None:intergenic | 45.0% |
| ! | ACCAAGCTGAGCAGCTTTAA+TGG | - | chr8.3:5801001-5801020 | None:intergenic | 45.0% |
| ! | AGGTTACATTGGGCTAGAGA+TGG | + | chr8.3:5802579-5802598 | MS.gene061224:CDS | 45.0% |
| ! | GATTGACTTAGCTGCCATGA+TGG | + | chr8.3:5802267-5802286 | MS.gene061224:CDS | 45.0% |
| ! | GGTTACATTGGGCTAGAGAT+GGG | + | chr8.3:5802580-5802599 | MS.gene061224:CDS | 45.0% |
| ! | GTGGACTATGACAAAGTACC+AGG | + | chr8.3:5803060-5803079 | MS.gene061224:CDS | 45.0% |
| ! | TGACAAGGTAGGACGCATTT+TGG | + | chr8.3:5802903-5802922 | MS.gene061224:CDS | 45.0% |
| !! | AGCTGTTTCTAATCTGACCC+GGG | + | chr8.3:5802303-5802322 | MS.gene061224:CDS | 45.0% |
| !! | GACGTCGTTTTCATCAGATC+CGG | - | chr8.3:5800941-5800960 | None:intergenic | 45.0% |
| !! | GGTTGGAGTTGATACTTCTG+GGG | + | chr8.3:5802747-5802766 | MS.gene061224:CDS | 45.0% |
| !! | GTGGTTGGAGTTGATACTTC+TGG | + | chr8.3:5802745-5802764 | MS.gene061224:CDS | 45.0% |
| AAGCTTGTAGTTATCGGGGC+AGG | + | chr8.3:5802559-5802578 | MS.gene061224:CDS | 50.0% | |
| AATTGCCTTCGCCCTGCTAT+TGG | - | chr8.3:5803187-5803206 | None:intergenic | 50.0% | |
| ACCACTTGCATCGAAAAGCG+TGG | + | chr8.3:5801027-5801046 | MS.gene061224:CDS | 50.0% | |
| AGGTCAAGAGGTTTCGCTTC+CGG | + | chr8.3:5800919-5800938 | MS.gene061224:CDS | 50.0% | |
| CACTAGGTGGGGTGACTATA+TGG | - | chr8.3:5802082-5802101 | None:intergenic | 50.0% | |
| CAGAGACCTCAGATGGTGAA+AGG | - | chr8.3:5802387-5802406 | None:intergenic | 50.0% | |
| CATATAGTCACCCCACCTAG+TGG | + | chr8.3:5802080-5802099 | MS.gene061224:intron | 50.0% | |
| CCCTGCTATTGGCCATGAAA+GGG | - | chr8.3:5803176-5803195 | None:intergenic | 50.0% | |
| CCCTTTCATGGCCAATAGCA+GGG | + | chr8.3:5803173-5803192 | MS.gene061224:CDS | 50.0% | |
| CGGATTTCTCCATCCATGGA+TGG | - | chr8.3:5802667-5802686 | None:intergenic | 50.0% | |
| CTAACTGTTGAACCAGCAGC+TGG | + | chr8.3:5802781-5802800 | MS.gene061224:CDS | 50.0% | |
| CTTCCCTACAGAAGCAACCT+CGG | - | chr8.3:5803103-5803122 | None:intergenic | 50.0% | |
| CTTCCGGATTTCTCCATCCA+TGG | - | chr8.3:5802671-5802690 | None:intergenic | 50.0% | |
| CTTGTGTGCCAACATTGGAC+CGG | - | chr8.3:5802986-5803005 | None:intergenic | 50.0% | |
| GAAGACAGAGGAGCAGGTTA+AGG | + | chr8.3:5803119-5803138 | MS.gene061224:CDS | 50.0% | |
| GAGAACGCTGAAACTGCTTC+CGG | - | chr8.3:5802687-5802706 | None:intergenic | 50.0% | |
| GAGGAGCAGGTTAAGGAAAC+TGG | + | chr8.3:5803126-5803145 | MS.gene061224:CDS | 50.0% | |
| GAGTCCTACCAGCAGATACA+AGG | - | chr8.3:5802840-5802859 | None:intergenic | 50.0% | |
| GATGCAACCAACGTTGAGAC+AGG | - | chr8.3:5801067-5801086 | None:intergenic | 50.0% | |
| GCACACAAGGCAGAAGAAGA+TGG | + | chr8.3:5802997-5803016 | MS.gene061224:CDS | 50.0% | |
| GCCATTAAAGCTGCTCAGCT+TGG | + | chr8.3:5800997-5801016 | MS.gene061224:CDS | 50.0% | |
| GGCTGTTAAAGAAGCCGCAA+TGG | + | chr8.3:5803386-5803405 | MS.gene061224:CDS | 50.0% | |
| GGGTTCCGCTCTTCTTTCAT+CGG | + | chr8.3:5800867-5800886 | MS.gene061224:CDS | 50.0% | |
| GGTAGGACTCCATTCACTTC+TGG | + | chr8.3:5802850-5802869 | MS.gene061224:CDS | 50.0% | |
| GTCTCGGGTGTCTATGCAAT+TGG | + | chr8.3:5802949-5802968 | MS.gene061224:CDS | 50.0% | |
| GTCTCTGTAGACACCGTTGA+AGG | + | chr8.3:5802400-5802419 | MS.gene061224:CDS | 50.0% | |
| GTGTCTACAGAGACCTCAGA+TGG | - | chr8.3:5802394-5802413 | None:intergenic | 50.0% | |
| GTTATCGGGGCAGGTTACAT+TGG | + | chr8.3:5802568-5802587 | MS.gene061224:CDS | 50.0% | |
| TCACCCCACCTAGTGGAATA+TGG | + | chr8.3:5802087-5802106 | MS.gene061224:intron | 50.0% | |
| TCCCTTTCATGGCCAATAGC+AGG | + | chr8.3:5803172-5803191 | MS.gene061224:CDS | 50.0% | |
| TCTGCCTTGTGTGCCAACAT+TGG | - | chr8.3:5802991-5803010 | None:intergenic | 50.0% | |
| TGCTTCTGTAGGGAAGACAG+AGG | + | chr8.3:5803107-5803126 | MS.gene061224:CDS | 50.0% | |
| TTCCCTACAGAAGCAACCTC+GGG | - | chr8.3:5803102-5803121 | None:intergenic | 50.0% | |
| TTCCGCTCTTCTTTCATCGG+CGG | + | chr8.3:5800870-5800889 | MS.gene061224:CDS | 50.0% | |
| TTGTGTGCCAACATTGGACC+GGG | - | chr8.3:5802985-5803004 | None:intergenic | 50.0% | |
| ! | ACCACGCTTTTCGATGCAAG+TGG | - | chr8.3:5801031-5801050 | None:intergenic | 50.0% |
| ! | ATCGAAAAGCGTGGTGCTCT+TGG | + | chr8.3:5801036-5801055 | MS.gene061224:CDS | 50.0% |
| ! | CTAGAGATGGGCTCTGTATG+GGG | + | chr8.3:5802592-5802611 | MS.gene061224:CDS | 50.0% |
| ! | GCTAGAGATGGGCTCTGTAT+GGG | + | chr8.3:5802591-5802610 | MS.gene061224:CDS | 50.0% |
| !! | AATCTGACCCGGGGTATTGA+AGG | + | chr8.3:5802313-5802332 | MS.gene061224:CDS | 50.0% |
| !! | GCTGTTTCTAATCTGACCCG+GGG | + | chr8.3:5802304-5802323 | MS.gene061224:CDS | 50.0% |
| !! | GGAGTTGATACTTCTGGGGA+TGG | + | chr8.3:5802751-5802770 | MS.gene061224:CDS | 50.0% |
| AACCCCGAGGTTGCTTCTGT+AGG | + | chr8.3:5803096-5803115 | MS.gene061224:CDS | 55.0% | |
| AACGACGTCGTCATCATCGG+TGG | + | chr8.3:5800952-5800971 | MS.gene061224:CDS | 55.0% | |
| ACCCCGAGGTTGCTTCTGTA+GGG | + | chr8.3:5803097-5803116 | MS.gene061224:CDS | 55.0% | |
| ACTGTTGAACCAGCAGCTGG+TGG | + | chr8.3:5802784-5802803 | MS.gene061224:CDS | 55.0% | |
| AGCTGGTAAGGTTGGGCATG+TGG | + | chr8.3:5803041-5803060 | MS.gene061224:CDS | 55.0% | |
| CGGTCCAATGTTGGCACACA+AGG | + | chr8.3:5802984-5803003 | MS.gene061224:CDS | 55.0% | |
| CTCCGCCGATGAAAGAAGAG+CGG | - | chr8.3:5800875-5800894 | None:intergenic | 55.0% | |
| GCCCTGCTATTGGCCATGAA+AGG | - | chr8.3:5803177-5803196 | None:intergenic | 55.0% | |
| GGCTCTGTATGGGGACGAAT+TGG | + | chr8.3:5802601-5802620 | MS.gene061224:CDS | 55.0% | |
| GGTGGTACCTGTCTCAACGT+TGG | + | chr8.3:5801057-5801076 | MS.gene061224:CDS | 55.0% | |
| TCCCTACAGAAGCAACCTCG+GGG | - | chr8.3:5803101-5803120 | None:intergenic | 55.0% | |
| TGTAGGGAAGACAGAGGAGC+AGG | + | chr8.3:5803113-5803132 | MS.gene061224:CDS | 55.0% | |
| ! | CGTTGGTTGCATCCCTTCCA+AGG | + | chr8.3:5801074-5801093 | MS.gene061224:CDS | 55.0% |
| ! | CTATGGCGAACTTGGCTCGT+AGG | + | chr8.3:5800842-5800861 | MS.gene061224:CDS | 55.0% |
| ! | GAAAAGCGTGGTGCTCTTGG+TGG | + | chr8.3:5801039-5801058 | MS.gene061224:CDS | 55.0% |
| ! | GCGAACTTGGCTCGTAGGAA+GGG | + | chr8.3:5800847-5800866 | MS.gene061224:CDS | 55.0% |
| ! | GGCTAGAGATGGGCTCTGTA+TGG | + | chr8.3:5802590-5802609 | MS.gene061224:CDS | 55.0% |
| !! | ATGGGGACGAATTGGCTCTG+AGG | + | chr8.3:5802609-5802628 | MS.gene061224:CDS | 55.0% |
| CATGGCCAATAGCAGGGCGA+AGG | + | chr8.3:5803179-5803198 | MS.gene061224:CDS | 60.0% | |
| GACGTCGTCATCATCGGTGG+TGG | + | chr8.3:5800955-5800974 | MS.gene061224:CDS | 60.0% | |
| GTCTGTTCACCACCAGCTGC+TGG | - | chr8.3:5802796-5802815 | None:intergenic | 60.0% | |
| ! | GGCGAACTTGGCTCGTAGGA+AGG | + | chr8.3:5800846-5800865 | MS.gene061224:CDS | 60.0% |
| ! | GTCATCATCGGTGGTGGTCC+CGG | + | chr8.3:5800961-5800980 | MS.gene061224:CDS | 60.0% |
| AATGGCGGCGACGTAACCGC+CGG | - | chr8.3:5800983-5801002 | None:intergenic | 65.0% | |
| ! | ATCATCGGTGGTGGTCCCGG+CGG | + | chr8.3:5800964-5800983 | MS.gene061224:CDS | 65.0% |
| ATGGCGGCGACGTAACCGCC+GGG | - | chr8.3:5800982-5801001 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 5800838 | 5803437 | 5800838 | ID=MS.gene061224 |
| chr8.3 | mRNA | 5800838 | 5803437 | 5800838 | ID=MS.gene061224.t1;Parent=MS.gene061224 |
| chr8.3 | exon | 5800838 | 5801095 | 5800838 | ID=MS.gene061224.t1.exon1;Parent=MS.gene061224.t1 |
| chr8.3 | CDS | 5800838 | 5801095 | 5800838 | ID=cds.MS.gene061224.t1;Parent=MS.gene061224.t1 |
| chr8.3 | exon | 5802187 | 5803437 | 5802187 | ID=MS.gene061224.t1.exon2;Parent=MS.gene061224.t1 |
| chr8.3 | CDS | 5802187 | 5803437 | 5802187 | ID=cds.MS.gene061224.t1;Parent=MS.gene061224.t1 |
| Gene Sequence |
| Protein sequence |
