Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29734.t1 | XP_003616764.1 | 96.4 | 391 | 14 | 0 | 1 | 391 | 1 | 391 | 1.40E-211 | 745.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29734.t1 | P49572 | 70.7 | 352 | 101 | 2 | 41 | 390 | 49 | 400 | 1.4e-140 | 500.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29734.t1 | G7KH34 | 96.4 | 391 | 14 | 0 | 1 | 391 | 1 | 391 | 1.0e-211 | 745.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061224 | MS.gene29734 | 0.80504 | 1.62E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29734.t1 | MTR_5g084030 | 96.419 | 391 | 14 | 0 | 1 | 391 | 1 | 391 | 0.0 | 767 |
| MS.gene29734.t1 | MTR_5g084030 | 96.606 | 383 | 13 | 0 | 9 | 391 | 10 | 392 | 0.0 | 756 |
| MS.gene29734.t1 | MTR_5g084030 | 97.384 | 344 | 9 | 0 | 48 | 391 | 11 | 354 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29734.t1 | AT5G48220 | 72.966 | 381 | 94 | 4 | 10 | 390 | 7 | 378 | 0.0 | 568 |
| MS.gene29734.t1 | AT5G48220 | 78.994 | 338 | 70 | 1 | 53 | 390 | 27 | 363 | 0.0 | 565 |
| MS.gene29734.t1 | AT5G48220 | 81.270 | 315 | 59 | 0 | 76 | 390 | 1 | 315 | 0.0 | 549 |
| MS.gene29734.t1 | AT5G48220 | 81.270 | 315 | 59 | 0 | 76 | 390 | 1 | 315 | 0.0 | 549 |
| MS.gene29734.t1 | AT2G04400 | 70.739 | 352 | 101 | 2 | 41 | 390 | 49 | 400 | 0.0 | 516 |
Find 93 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGAAGCTTTGAAAATT+TGG | 0.126121 | 5.3:-68131069 | MS.gene29734:intron |
| GTTTAGATGGTTGGGGAATC+TGG | 0.247392 | 5.3:-68129997 | MS.gene29734:intron |
| TTCTCCTTATTCTTATACCT+TGG | 0.277135 | 5.3:+68133511 | None:intergenic |
| GTAAAACAGCAGCAATTAAA+AGG | 0.309423 | 5.3:+68130841 | None:intergenic |
| AGGGAATTCGATCGTGTTCT+TGG | 0.315417 | 5.3:-68130325 | MS.gene29734:CDS |
| AGTTGGAGGAATAGTGGTTC+TGG | 0.317340 | 5.3:+68134281 | None:intergenic |
| CTACCCAAGGTATAAGAATA+AGG | 0.335290 | 5.3:-68133515 | MS.gene29734:CDS |
| TGAAAATGCACCTCCTGTTC+GGG | 0.336397 | 5.3:-68133237 | MS.gene29734:CDS |
| ATGGTTATGTTTAGATGGTT+GGG | 0.336646 | 5.3:-68130005 | MS.gene29734:intron |
| AAAGGTCCTACATAATGATT+AGG | 0.338327 | 5.3:+68133471 | None:intergenic |
| TTGAAAATGCACCTCCTGTT+CGG | 0.344054 | 5.3:-68133238 | MS.gene29734:CDS |
| AGATTGCTAATTCCCTTTCC+AGG | 0.344807 | 5.3:+68129544 | None:intergenic |
| AGAAAGAAAACCCCTTCTTA+TGG | 0.363149 | 5.3:-68133273 | MS.gene29734:CDS |
| AGGAATAGTGGTTCTGGGAT+TGG | 0.374224 | 5.3:+68134287 | None:intergenic |
| TGTACATAAGCAATGTCTTC+AGG | 0.374331 | 5.3:+68129964 | None:intergenic |
| TCTCCTTATTCTTATACCTT+GGG | 0.386336 | 5.3:+68133512 | None:intergenic |
| TATTTCCCTCGTTCTGCAAC+CGG | 0.387527 | 5.3:+68133442 | None:intergenic |
| TATGGTTATGTTTAGATGGT+TGG | 0.396274 | 5.3:-68130006 | MS.gene29734:intron |
| AAGGGAATTAGCAATCTCTT+TGG | 0.397539 | 5.3:-68129538 | MS.gene29734:CDS |
| GTTGGAGGAATAGTGGTTCT+GGG | 0.405718 | 5.3:+68134282 | None:intergenic |
| AAGGTCCTACATAATGATTA+GGG | 0.406698 | 5.3:+68133472 | None:intergenic |
| GGCATCAACAATCGTAATCT+TGG | 0.408935 | 5.3:-68130280 | MS.gene29734:intron |
| TAATGAACGAACTGGATTGC+CGG | 0.416704 | 5.3:-68133189 | MS.gene29734:CDS |
| TTGGAGTTAATAAGAAATGC+TGG | 0.428736 | 5.3:-68131050 | MS.gene29734:CDS |
| GACTTGAGTTGGAGGAATAG+TGG | 0.436368 | 5.3:+68134275 | None:intergenic |
| CGATCGTGTTCTTGGAATAG+AGG | 0.438551 | 5.3:-68130317 | MS.gene29734:CDS |
| GTTACCCTTGAGAGAAATCA+AGG | 0.441183 | 5.3:+68134335 | None:intergenic |
| GAAAACCCCTTCTTATGGTT+AGG | 0.442937 | 5.3:-68133268 | MS.gene29734:CDS |
| ACCACGAAGAAGCTTCTTGA+AGG | 0.446760 | 5.3:-68130141 | MS.gene29734:CDS |
| TCCTTCAAGAAGCTTCTTCG+TGG | 0.451429 | 5.3:+68130140 | None:intergenic |
| ATTGTAGCCGAACCTTCATT+AGG | 0.459178 | 5.3:+68133618 | None:intergenic |
| AATAAGAAATGCTGGAGTAA+AGG | 0.463960 | 5.3:-68131042 | MS.gene29734:intron |
| GTTAAGATATGCAAATTACT+TGG | 0.466429 | 5.3:-68130795 | MS.gene29734:CDS |
| GATATGCAAATTACTTGGAC+TGG | 0.466507 | 5.3:-68130790 | MS.gene29734:CDS |
| CTATAAGTATTGACTTGAGT+TGG | 0.466810 | 5.3:+68134264 | None:intergenic |
| GGTTGAAGCACTCAAAGTTA+AGG | 0.468677 | 5.3:-68133574 | MS.gene29734:CDS |
| TCTCTCAAGATGCCTCTACT+TGG | 0.471626 | 5.3:+68133137 | None:intergenic |
| AGTAGGAATGTTTCATAATG+AGG | 0.474718 | 5.3:-68133544 | MS.gene29734:CDS |
| GGCAGAGCCTAATGAAGGTT+CGG | 0.479822 | 5.3:-68133625 | MS.gene29734:CDS |
| AGGGCGGCTAATGAACGAAC+TGG | 0.483524 | 5.3:-68133197 | MS.gene29734:CDS |
| TTCTGCAACCGGAATTGAAA+AGG | 0.484408 | 5.3:+68133453 | None:intergenic |
| GCCCCAATAAAATCCCGAAC+AGG | 0.484947 | 5.3:+68133224 | None:intergenic |
| TGAATTCTTTGCACAACAAA+GGG | 0.485742 | 5.3:+68130916 | None:intergenic |
| ATTGTGAAACAAAGTGATCC+TGG | 0.486316 | 5.3:-68129562 | MS.gene29734:CDS |
| GGAATCCTTGATTTCTCTCA+AGG | 0.486941 | 5.3:-68134340 | MS.gene29734:CDS |
| ATAGAGGGCGTTGAGCTCAT+TGG | 0.489453 | 5.3:-68130301 | MS.gene29734:CDS |
| AAATACACCACGTAACATCT+TGG | 0.493800 | 5.3:-68133424 | MS.gene29734:CDS |
| AATGAACGAACTGGATTGCC+GGG | 0.495625 | 5.3:-68133188 | MS.gene29734:CDS |
| AAGCACTCAAAGTTAAGGAA+TGG | 0.501917 | 5.3:-68133569 | MS.gene29734:CDS |
| TGGTTATGTTTAGATGGTTG+GGG | 0.503041 | 5.3:-68130004 | MS.gene29734:intron |
| GATTAGGCAGAGCCTAATGA+AGG | 0.506962 | 5.3:-68133630 | MS.gene29734:intron |
| ATTGCTCAATCTTATGAGAA+AGG | 0.508235 | 5.3:-68131271 | MS.gene29734:CDS |
| ATAAGGAGAAGACCACCAAC+TGG | 0.508374 | 5.3:-68133498 | MS.gene29734:CDS |
| ATGAATTCTTTGCACAACAA+AGG | 0.510154 | 5.3:+68130915 | None:intergenic |
| AGCACTCAAAGTTAAGGAAT+GGG | 0.512586 | 5.3:-68133568 | MS.gene29734:CDS |
| TCGGCTACAATAGCCACATC+TGG | 0.513917 | 5.3:-68133606 | MS.gene29734:CDS |
| TAAGTATTGACTTGAGTTGG+AGG | 0.516113 | 5.3:+68134267 | None:intergenic |
| CTCTACTATGCTCGATCGAA+AGG | 0.521577 | 5.3:-68130876 | MS.gene29734:CDS |
| AAAGTTAAGGAATGGGAAGT+AGG | 0.522034 | 5.3:-68133561 | MS.gene29734:CDS |
| AATGTAGGTGCATGATGAGA+GGG | 0.523705 | 5.3:-68130344 | MS.gene29734:intron |
| ACCCCTTCTTATGGTTAGGA+AGG | 0.525971 | 5.3:-68133264 | MS.gene29734:CDS |
| ATGTATTTGATGTCAAGATC+AGG | 0.527017 | 5.3:+68130819 | None:intergenic |
| TTGACTTCAGCAATCAATCC+CGG | 0.531405 | 5.3:+68133170 | None:intergenic |
| GGGCCTTCCTAACCATAAGA+AGG | 0.532318 | 5.3:+68133261 | None:intergenic |
| AAGAATTCATCATAGATGCT+TGG | 0.536166 | 5.3:-68130902 | MS.gene29734:CDS |
| ATTGCTTATGTACAAGAAGC+AGG | 0.536943 | 5.3:-68129955 | MS.gene29734:CDS |
| GGCCTTCCTAACCATAAGAA+GGG | 0.541500 | 5.3:+68133262 | None:intergenic |
| AAACAAAGTGATCCTGGAAA+GGG | 0.548778 | 5.3:-68129556 | MS.gene29734:CDS |
| TAATGTAGGTGCATGATGAG+AGG | 0.574784 | 5.3:-68130345 | MS.gene29734:intron |
| TCAATTCCGGTTGCAGAACG+AGG | 0.575802 | 5.3:-68133448 | MS.gene29734:CDS |
| GATCGTGTTCTTGGAATAGA+GGG | 0.577340 | 5.3:-68130316 | MS.gene29734:CDS |
| CCAATAAAATCCCGAACAGG+AGG | 0.579688 | 5.3:+68133227 | None:intergenic |
| ATTGATTGCTGAAGTCAAGA+AGG | 0.582300 | 5.3:-68133165 | MS.gene29734:CDS |
| GAAACAAAGTGATCCTGGAA+AGG | 0.587322 | 5.3:-68129557 | MS.gene29734:CDS |
| AATGAGGTTGCTGCTACCCA+AGG | 0.588159 | 5.3:-68133528 | MS.gene29734:CDS |
| CAATTCCGGTTGCAGAACGA+GGG | 0.593820 | 5.3:-68133447 | MS.gene29734:CDS |
| TGATCTTGACATCAAATACA+TGG | 0.599333 | 5.3:-68130817 | MS.gene29734:CDS |
| TGGACTGGCAGCTCTTGTTG+AGG | 0.600595 | 5.3:-68130775 | MS.gene29734:intron |
| GGAAGAGATTGTGTGGAACA+AGG | 0.601540 | 5.3:-68133403 | MS.gene29734:CDS |
| CAAGGACAAAGAAGTCGCGC+AGG | 0.602152 | 5.3:-68133385 | MS.gene29734:intron |
| TGGGATTGGAAGAGAACGAA+GGG | 0.606231 | 5.3:+68134301 | None:intergenic |
| AACCACAGATTCACCAGATG+TGG | 0.614744 | 5.3:+68133593 | None:intergenic |
| GCTCAATCTTATGAGAAAGG+TGG | 0.618974 | 5.3:-68131268 | MS.gene29734:CDS |
| GCCTTCCTAACCATAAGAAG+GGG | 0.620205 | 5.3:+68133263 | None:intergenic |
| GAATCCTTGATTTCTCTCAA+GGG | 0.623977 | 5.3:-68134339 | MS.gene29734:CDS |
| AAGAAGGCTTCACCAAGTAG+AGG | 0.628444 | 5.3:-68133149 | MS.gene29734:CDS |
| AAGCTTCTTGAAGGAGAGCG+AGG | 0.630844 | 5.3:-68130132 | MS.gene29734:CDS |
| GGTCCTACATAATGATTAGG+GGG | 0.633768 | 5.3:+68133474 | None:intergenic |
| ACATCTTGGAAGAGATTGTG+TGG | 0.641943 | 5.3:-68133410 | MS.gene29734:CDS |
| AGCCACATCTGGTGAATCTG+TGG | 0.650573 | 5.3:-68133595 | MS.gene29734:CDS |
| AGGTCCTACATAATGATTAG+GGG | 0.661433 | 5.3:+68133473 | None:intergenic |
| CTGGGATTGGAAGAGAACGA+AGG | 0.670959 | 5.3:+68134300 | None:intergenic |
| ATCTCTTCCAAGATGTTACG+TGG | 0.686071 | 5.3:+68133417 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTTAAATTAAAATTA+GGG | + | chr5.3:68134080-68134099 | None:intergenic | 0.0% |
| !! | TATAAATTTAAATTAAAATT+AGG | + | chr5.3:68134081-68134100 | None:intergenic | 0.0% |
| !! | AACATTATAAAAAAATCAAA+AGG | + | chr5.3:68129847-68129866 | None:intergenic | 10.0% |
| !! | ACATTATAAAAAAATCAAAA+GGG | + | chr5.3:68129846-68129865 | None:intergenic | 10.0% |
| !! | TAACTATAAAAATTTGTATA+TGG | + | chr5.3:68134104-68134123 | None:intergenic | 10.0% |
| !! | TACTTGTAAATATAATAAAT+AGG | + | chr5.3:68133264-68133283 | None:intergenic | 10.0% |
| !! | AAACATTATATGAAACAAAA+AGG | + | chr5.3:68130026-68130045 | None:intergenic | 15.0% |
| !! | AAATATGATCAAAATCAAAA+AGG | + | chr5.3:68130191-68130210 | None:intergenic | 15.0% |
| !! | AACAATAAAACAATACAAAA+AGG | + | chr5.3:68129686-68129705 | None:intergenic | 15.0% |
| !! | AACATTATATGAAACAAAAA+GGG | + | chr5.3:68130025-68130044 | None:intergenic | 15.0% |
| !! | AATATGATCAAAATCAAAAA+GGG | + | chr5.3:68130190-68130209 | None:intergenic | 15.0% |
| !! | CAAAAGAAATATATAAATCA+AGG | + | chr5.3:68133482-68133501 | None:intergenic | 15.0% |
| !! | TGTTGTAATATTTATACTTA+CGG | - | chr5.3:68133630-68133649 | MS.gene29734:intron | 15.0% |
| !!! | AAGTTAATTTTGTATAGTTA+CGG | + | chr5.3:68133321-68133340 | None:intergenic | 15.0% |
| !!! | ATAATGTTTTTGTGATTATT+TGG | - | chr5.3:68129859-68129878 | MS.gene29734:intron | 15.0% |
| !!! | ATTTTTTGTATTTAATTGAG+AGG | - | chr5.3:68130162-68130181 | MS.gene29734:CDS | 15.0% |
| !!! | ATTTTTTTGGTTTAATTTTG+AGG | - | chr5.3:68129997-68130016 | MS.gene29734:intron | 15.0% |
| !!! | CTTGATTTATATATTTCTTT+TGG | - | chr5.3:68133480-68133499 | MS.gene29734:CDS | 15.0% |
| !!! | TTGATTTTGATCATATTTTT+GGG | - | chr5.3:68130193-68130212 | MS.gene29734:intron | 15.0% |
| !!! | TTGTTTCATATAATGTTTTT+TGG | - | chr5.3:68130028-68130047 | MS.gene29734:intron | 15.0% |
| !!! | TTTGATTTTGATCATATTTT+TGG | - | chr5.3:68130192-68130211 | MS.gene29734:intron | 15.0% |
| !! | AAGTTCATATTTACATTAAC+TGG | + | chr5.3:68131324-68131343 | None:intergenic | 20.0% |
| !! | ACTTTAAACTGATGATTATA+TGG | - | chr5.3:68133837-68133856 | MS.gene29734:intron | 20.0% |
| !! | AGTTCATATTTACATTAACT+GGG | + | chr5.3:68131323-68131342 | None:intergenic | 20.0% |
| !! | ATTATATGGTTATGTTTAGA+TGG | - | chr5.3:68133851-68133870 | MS.gene29734:intron | 20.0% |
| !! | ATTTAGCAAAGACAAATAAA+AGG | + | chr5.3:68131118-68131137 | None:intergenic | 20.0% |
| !! | TAAAAAAGAAAAAACAGAAC+AGG | + | chr5.3:68131541-68131560 | None:intergenic | 20.0% |
| !! | TTATCATTCATTTCATAAAG+AGG | - | chr5.3:68132227-68132246 | MS.gene29734:intron | 20.0% |
| !!! | AATTGTTTATGATTTGTTGA+CGG | - | chr5.3:68134191-68134210 | MS.gene29734:intron | 20.0% |
| !!! | ATGTAAATATGAACTTTTGA+AGG | - | chr5.3:68131328-68131347 | MS.gene29734:intron | 20.0% |
| !!! | ATTATTTGCTGTTTTGATTA+AGG | - | chr5.3:68130051-68130070 | MS.gene29734:intron | 20.0% |
| !!! | ATTATTTGGTGTTATGATTA+TGG | - | chr5.3:68129873-68129892 | MS.gene29734:intron | 20.0% |
| !!! | GATTATTTGATGTTTTGATT+AGG | - | chr5.3:68130215-68130234 | MS.gene29734:intron | 20.0% |
| !!! | GTTGATGCATATTATTTTTT+TGG | - | chr5.3:68129984-68130003 | MS.gene29734:CDS | 20.0% |
| !!! | GTTTGTTTTGTGAAATTTTA+AGG | + | chr5.3:68131717-68131736 | None:intergenic | 20.0% |
| !!! | TGTTATTAAGTCGATTATTT+TGG | - | chr5.3:68131571-68131590 | MS.gene29734:intron | 20.0% |
| !!! | TTTTATCATTCATTTCATAG+TGG | - | chr5.3:68132305-68132324 | MS.gene29734:intron | 20.0% |
| !!! | TTTTCGTTGTATATTTATCT+GGG | - | chr5.3:68129705-68129724 | MS.gene29734:intron | 20.0% |
| !!! | TTTTTCGTTGTATATTTATC+TGG | - | chr5.3:68129704-68129723 | MS.gene29734:intron | 20.0% |
| ! | AAAACTAAATACACTAGATG+TGG | + | chr5.3:68130107-68130126 | None:intergenic | 25.0% |
| ! | AAATCAGTCATAAAAGTTCA+AGG | + | chr5.3:68133353-68133372 | None:intergenic | 25.0% |
| ! | AAGTTATTACTGATATCATG+TGG | - | chr5.3:68130826-68130845 | MS.gene29734:CDS | 25.0% |
| ! | AGTGTAATTTAAACTGTGAT+CGG | - | chr5.3:68133223-68133242 | MS.gene29734:CDS | 25.0% |
| ! | AGTTATTACTGATATCATGT+GGG | - | chr5.3:68130827-68130846 | MS.gene29734:CDS | 25.0% |
| ! | CAAATGAACTTCCAAAAAAT+AGG | + | chr5.3:68131459-68131478 | None:intergenic | 25.0% |
| ! | CACTGCTAAATGTTAATATT+TGG | - | chr5.3:68132703-68132722 | MS.gene29734:intron | 25.0% |
| ! | GAAGAAATAAAAACTGACAA+CGG | + | chr5.3:68131655-68131674 | None:intergenic | 25.0% |
| ! | GAAGAAGAAATCTTAAATAG+TGG | + | chr5.3:68131942-68131961 | None:intergenic | 25.0% |
| ! | GTAGAATAAATCGTATATCA+AGG | + | chr5.3:68132868-68132887 | None:intergenic | 25.0% |
| ! | GTTAAGATATGCAAATTACT+TGG | - | chr5.3:68133066-68133085 | MS.gene29734:intron | 25.0% |
| ! | GTTCATATTTACATTAACTG+GGG | + | chr5.3:68131322-68131341 | None:intergenic | 25.0% |
| ! | TCATAAAGAGGTAGAAATTA+GGG | - | chr5.3:68132239-68132258 | MS.gene29734:intron | 25.0% |
| ! | TTCATAAAGAGGTAGAAATT+AGG | - | chr5.3:68132238-68132257 | MS.gene29734:intron | 25.0% |
| !! | TGGTTTAGTTGAATTTTGAA+TGG | - | chr5.3:68129752-68129771 | MS.gene29734:intron | 25.0% |
| !! | TTATCAGTTGATATCAAGTA+CGG | - | chr5.3:68131429-68131448 | MS.gene29734:intron | 25.0% |
| !!! | AGAAGTATTGCTTCAAAATA+AGG | - | chr5.3:68131514-68131533 | MS.gene29734:intron | 25.0% |
| !!! | GAAGTATTGCTTCAAAATAA+GGG | - | chr5.3:68131515-68131534 | MS.gene29734:intron | 25.0% |
| !!! | GACAGATGAAAAGTATTTTA+AGG | - | chr5.3:68132637-68132656 | MS.gene29734:intron | 25.0% |
| !!! | GTTTTTATTTCTTCTCTTCA+CGG | - | chr5.3:68131661-68131680 | MS.gene29734:intron | 25.0% |
| !!! | TCTCTCTCATTTTTCTTTTT+GGG | - | chr5.3:68129728-68129747 | MS.gene29734:intron | 25.0% |
| !!! | TGAATTGTTGATTCAGTTTT+GGG | - | chr5.3:68131804-68131823 | MS.gene29734:intron | 25.0% |
| AAAGGTCCTACATAATGATT+AGG | + | chr5.3:68130393-68130412 | None:intergenic | 30.0% | |
| AAATTCAATCAACTCACTTC+AGG | + | chr5.3:68133198-68133217 | None:intergenic | 30.0% | |
| AAGAATTCATCATAGATGCT+TGG | - | chr5.3:68132959-68132978 | MS.gene29734:intron | 30.0% | |
| AAGGTCCTACATAATGATTA+GGG | + | chr5.3:68130392-68130411 | None:intergenic | 30.0% | |
| AATAAGAAATGCTGGAGTAA+AGG | - | chr5.3:68132819-68132838 | MS.gene29734:intron | 30.0% | |
| AATCAACACAATTCACAAGA+TGG | + | chr5.3:68129931-68129950 | None:intergenic | 30.0% | |
| AGGTTGAATTCACAACATAA+TGG | - | chr5.3:68132547-68132566 | MS.gene29734:intron | 30.0% | |
| AGTAGGAATGTTTCATAATG+AGG | - | chr5.3:68130317-68130336 | MS.gene29734:CDS | 30.0% | |
| ATGAATTCTTTGCACAACAA+AGG | + | chr5.3:68132949-68132968 | None:intergenic | 30.0% | |
| ATGGTTATGTTTAGATGGTT+GGG | - | chr5.3:68133856-68133875 | MS.gene29734:intron | 30.0% | |
| ATGTATTTGATGTCAAGATC+AGG | + | chr5.3:68133045-68133064 | None:intergenic | 30.0% | |
| ATGTGTGGAACAAATATCAA+AGG | + | chr5.3:68132506-68132525 | None:intergenic | 30.0% | |
| ATTGCTCAATCTTATGAGAA+AGG | - | chr5.3:68132590-68132609 | MS.gene29734:intron | 30.0% | |
| ATTTAACCAACGAGATTCAA+AGG | + | chr5.3:68131072-68131091 | None:intergenic | 30.0% | |
| CAAACATAATCCAAGATTAC+AGG | + | chr5.3:68132420-68132439 | None:intergenic | 30.0% | |
| CAAACTGGGTAAACAAATAT+TGG | - | chr5.3:68132371-68132390 | MS.gene29734:intron | 30.0% | |
| CAAGTATGAAATCTACAGAT+AGG | - | chr5.3:68133278-68133297 | MS.gene29734:CDS | 30.0% | |
| CAATATTTGTTTACCCAGTT+TGG | + | chr5.3:68132373-68132392 | None:intergenic | 30.0% | |
| GATTCAGTGTTGTCAAATAA+CGG | - | chr5.3:68130883-68130902 | MS.gene29734:CDS | 30.0% | |
| GGAAATCAAAACAAACTTAC+TGG | + | chr5.3:68130760-68130779 | None:intergenic | 30.0% | |
| GTAAAACAGCAGCAATTAAA+AGG | + | chr5.3:68133023-68133042 | None:intergenic | 30.0% | |
| GTAATCTTGGATTATGTTTG+TGG | - | chr5.3:68132420-68132439 | MS.gene29734:intron | 30.0% | |
| TAGCTATTATAGTGTAAGCT+TGG | - | chr5.3:68133171-68133190 | MS.gene29734:CDS | 30.0% | |
| TATGGTTATGTTTAGATGGT+TGG | - | chr5.3:68133855-68133874 | MS.gene29734:intron | 30.0% | |
| TATTCTCTTACCTGTAATCT+TGG | - | chr5.3:68132407-68132426 | MS.gene29734:intron | 30.0% | |
| TCTCCTTATTCTTATACCTT+GGG | + | chr5.3:68130352-68130371 | None:intergenic | 30.0% | |
| TGAAAAAGGGGTAGAAATTA+GGG | - | chr5.3:68132159-68132178 | MS.gene29734:intron | 30.0% | |
| TGAATTCTTTGCACAACAAA+GGG | + | chr5.3:68132948-68132967 | None:intergenic | 30.0% | |
| TGATCTTGACATCAAATACA+TGG | - | chr5.3:68133044-68133063 | MS.gene29734:intron | 30.0% | |
| TGTTTCTCAATAACTAGTAC+AGG | - | chr5.3:68131477-68131496 | MS.gene29734:intron | 30.0% | |
| TTCTCCTTATTCTTATACCT+TGG | + | chr5.3:68130353-68130372 | None:intergenic | 30.0% | |
| TTGAAAAAGGGGTAGAAATT+AGG | - | chr5.3:68132158-68132177 | MS.gene29734:intron | 30.0% | |
| TTGGAGTTAATAAGAAATGC+TGG | - | chr5.3:68132811-68132830 | MS.gene29734:intron | 30.0% | |
| TTGTGCTTATGTGAACTATT+TGG | - | chr5.3:68130553-68130572 | MS.gene29734:intron | 30.0% | |
| TTTAACCAACGAGATTCAAA+GGG | + | chr5.3:68131071-68131090 | None:intergenic | 30.0% | |
| TTTCTCTCTTGATTTCTCTT+AGG | - | chr5.3:68132113-68132132 | MS.gene29734:intron | 30.0% | |
| ! | AAACACTTTTCATTCACCTT+GGG | - | chr5.3:68132058-68132077 | MS.gene29734:intron | 30.0% |
| ! | ACGTTGAAGTTTGAAAGTTT+TGG | - | chr5.3:68131735-68131754 | MS.gene29734:intron | 30.0% |
| ! | CTCTTTTGTCAATTTTTCAC+AGG | - | chr5.3:68134259-68134278 | MS.gene29734:CDS | 30.0% |
| ! | TGTCAATTTTTCACAGGTTT+TGG | - | chr5.3:68134265-68134284 | MS.gene29734:CDS | 30.0% |
| ! | TGTTAGATATGTTGCTTGAA+GGG | + | chr5.3:68131632-68131651 | None:intergenic | 30.0% |
| ! | TTCTTAAAAGTTCCCTCTTT+TGG | + | chr5.3:68131989-68132008 | None:intergenic | 30.0% |
| !! | AATTTTTCACAGGTTTTGGT+GGG | - | chr5.3:68134269-68134288 | MS.gene29734:CDS | 30.0% |
| !! | ATTTGGTGTTATGATTATGG+TGG | - | chr5.3:68129876-68129895 | MS.gene29734:intron | 30.0% |
| !! | CGTCAGATCTTTAAAACATT+TGG | - | chr5.3:68134136-68134155 | MS.gene29734:intron | 30.0% |
| !! | CTATAAGTATTGACTTGAGT+TGG | + | chr5.3:68129600-68129619 | None:intergenic | 30.0% |
| !! | CTCTCTCATTTTTCTTTTTG+GGG | - | chr5.3:68129729-68129748 | MS.gene29734:intron | 30.0% |
| !! | GGAACTTTTAAGAAACTTAG+AGG | - | chr5.3:68131995-68132014 | MS.gene29734:intron | 30.0% |
| !! | GTCTCTCTCATTTTTCTTTT+TGG | - | chr5.3:68129727-68129746 | MS.gene29734:intron | 30.0% |
| !! | TCATTCATTTCATAGTGGAT+TGG | - | chr5.3:68132310-68132329 | MS.gene29734:intron | 30.0% |
| !! | TTTTATTTGAGTCATGCTTG+CGG | - | chr5.3:68131158-68131177 | MS.gene29734:intron | 30.0% |
| !! | TTTTTCTAGTGTCATAAGCA+TGG | + | chr5.3:68132911-68132930 | None:intergenic | 30.0% |
| !!! | AGTACGGTATACCTATTTTT+TGG | - | chr5.3:68131445-68131464 | MS.gene29734:intron | 30.0% |
| !!! | CTGAATTGTTGATTCAGTTT+TGG | - | chr5.3:68131803-68131822 | MS.gene29734:intron | 30.0% |
| !!! | GATTTTTGTTTTCTTGTCCA+GGG | - | chr5.3:68132775-68132794 | MS.gene29734:intron | 30.0% |
| !!! | TGATTTTTGTTTTCTTGTCC+AGG | - | chr5.3:68132774-68132793 | MS.gene29734:intron | 30.0% |
| !!! | TTGTTTTGATCATCTAATGC+AGG | - | chr5.3:68131216-68131235 | MS.gene29734:intron | 30.0% |
| AAACAAAGTGATCCTGGAAA+GGG | - | chr5.3:68134305-68134324 | MS.gene29734:CDS | 35.0% | |
| AAAGTTAAGGAATGGGAAGT+AGG | - | chr5.3:68130300-68130319 | MS.gene29734:CDS | 35.0% | |
| AAATACACCACGTAACATCT+TGG | - | chr5.3:68130437-68130456 | MS.gene29734:intron | 35.0% | |
| AAGCACTCAAAGTTAAGGAA+TGG | - | chr5.3:68130292-68130311 | MS.gene29734:CDS | 35.0% | |
| AAGGGAATTAGCAATCTCTT+TGG | - | chr5.3:68134323-68134342 | MS.gene29734:CDS | 35.0% | |
| AGAAAGAAAACCCCTTCTTA+TGG | - | chr5.3:68130588-68130607 | MS.gene29734:intron | 35.0% | |
| AGCACTCAAAGTTAAGGAAT+GGG | - | chr5.3:68130293-68130312 | MS.gene29734:CDS | 35.0% | |
| AGGTCCTACATAATGATTAG+GGG | + | chr5.3:68130391-68130410 | None:intergenic | 35.0% | |
| ATTAAGGTGAAGCATGATGA+TGG | - | chr5.3:68130067-68130086 | MS.gene29734:intron | 35.0% | |
| ATTGATTGCTGAAGTCAAGA+AGG | - | chr5.3:68130696-68130715 | MS.gene29734:intron | 35.0% | |
| ATTGCTTATGTACAAGAAGC+AGG | - | chr5.3:68133906-68133925 | MS.gene29734:intron | 35.0% | |
| ATTGTGAAACAAAGTGATCC+TGG | - | chr5.3:68134299-68134318 | MS.gene29734:CDS | 35.0% | |
| CAATAACTAGTACAGGTTCA+TGG | - | chr5.3:68131484-68131503 | MS.gene29734:intron | 35.0% | |
| CTACCCAAGGTATAAGAATA+AGG | - | chr5.3:68130346-68130365 | MS.gene29734:intron | 35.0% | |
| GAATCCTTGATTTCTCTCAA+GGG | - | chr5.3:68129522-68129541 | MS.gene29734:CDS | 35.0% | |
| GAATGGTATATGCGTTCAAT+TGG | - | chr5.3:68129769-68129788 | MS.gene29734:intron | 35.0% | |
| GATATGCAAATTACTTGGAC+TGG | - | chr5.3:68133071-68133090 | MS.gene29734:intron | 35.0% | |
| GATTACAGGTAAGAGAATAG+AGG | + | chr5.3:68132406-68132425 | None:intergenic | 35.0% | |
| TCATAAACACAACCACAATG+AGG | - | chr5.3:68133979-68133998 | MS.gene29734:intron | 35.0% | |
| TCCAGCACAAATAAGAAACA+TGG | + | chr5.3:68133458-68133477 | None:intergenic | 35.0% | |
| TGATGCGATGCAAAAATACA+AGG | + | chr5.3:68131600-68131619 | None:intergenic | 35.0% | |
| TGGTTATGTTTAGATGGTTG+GGG | - | chr5.3:68133857-68133876 | MS.gene29734:intron | 35.0% | |
| TGTACATAAGCAATGTCTTC+AGG | + | chr5.3:68133900-68133919 | None:intergenic | 35.0% | |
| TTAACCAACGAGATTCAAAG+GGG | + | chr5.3:68131070-68131089 | None:intergenic | 35.0% | |
| TTAAGAAACTTAGAGGCGAA+GGG | - | chr5.3:68132002-68132021 | MS.gene29734:intron | 35.0% | |
| TTCTCTTAGGATCTCATTGT+GGG | - | chr5.3:68132126-68132145 | MS.gene29734:intron | 35.0% | |
| TTTAAGAAACTTAGAGGCGA+AGG | - | chr5.3:68132001-68132020 | MS.gene29734:intron | 35.0% | |
| TTTCTCTTAGGATCTCATTG+TGG | - | chr5.3:68132125-68132144 | MS.gene29734:intron | 35.0% | |
| ! | ATGTAGGACCTTTTCAATTC+CGG | - | chr5.3:68130400-68130419 | MS.gene29734:intron | 35.0% |
| ! | ATTATGGTGGAGCATAATGA+AGG | - | chr5.3:68129889-68129908 | MS.gene29734:intron | 35.0% |
| ! | CATGTGGGAAATGTTTGTTT+TGG | - | chr5.3:68130842-68130861 | MS.gene29734:CDS | 35.0% |
| ! | GAAACACTTTTCATTCACCT+TGG | - | chr5.3:68132057-68132076 | MS.gene29734:intron | 35.0% |
| ! | GAATCTCGTTGGTTAAATTC+AGG | - | chr5.3:68131074-68131093 | MS.gene29734:intron | 35.0% |
| ! | GGTCTACATAAAGCATTAGA+TGG | + | chr5.3:68132890-68132909 | None:intergenic | 35.0% |
| ! | GTGTTAGATATGTTGCTTGA+AGG | + | chr5.3:68131633-68131652 | None:intergenic | 35.0% |
| !! | AAAATTAGGGGCATCGATAT+AGG | + | chr5.3:68134067-68134086 | None:intergenic | 35.0% |
| !! | AGTAGAGTGTTGTCAAATAG+TGG | - | chr5.3:68130963-68130982 | MS.gene29734:intron | 35.0% |
| !! | CAATTTTTCACAGGTTTTGG+TGG | - | chr5.3:68134268-68134287 | MS.gene29734:CDS | 35.0% |
| !! | CATAATGGATTCTCTCTTAC+AGG | - | chr5.3:68132562-68132581 | MS.gene29734:intron | 35.0% |
| !! | TAAGTATTGACTTGAGTTGG+AGG | + | chr5.3:68129597-68129616 | None:intergenic | 35.0% |
| !! | TCTCATTTTTCTTTTTGGGG+TGG | - | chr5.3:68129732-68129751 | MS.gene29734:intron | 35.0% |
| !!! | ACTCTTTTGAGACCAAAAGA+GGG | - | chr5.3:68131974-68131993 | MS.gene29734:intron | 35.0% |
| !!! | GTTTGTTCTAGAAGAGCTTT+TGG | - | chr5.3:68132181-68132200 | MS.gene29734:intron | 35.0% |
| !!! | TACTCTTTTGAGACCAAAAG+AGG | - | chr5.3:68131973-68131992 | MS.gene29734:intron | 35.0% |
| !!! | TGTGGCTTCTATTTTTTGTG+TGG | - | chr5.3:68133668-68133687 | MS.gene29734:intron | 35.0% |
| ACATCTTGGAAGAGATTGTG+TGG | - | chr5.3:68130451-68130470 | MS.gene29734:intron | 40.0% | |
| AGATTGCTAATTCCCTTTCC+AGG | + | chr5.3:68134320-68134339 | None:intergenic | 40.0% | |
| ATCTCTTCCAAGATGTTACG+TGG | + | chr5.3:68130447-68130466 | None:intergenic | 40.0% | |
| ATTGTAGCCGAACCTTCATT+AGG | + | chr5.3:68130246-68130265 | None:intergenic | 40.0% | |
| CATAAGCTAAAGCCTCATTG+TGG | + | chr5.3:68133994-68134013 | None:intergenic | 40.0% | |
| CCAATATGACCTACATCTAG+GGG | + | chr5.3:68132349-68132368 | None:intergenic | 40.0% | |
| CCCAATATGACCTACATCTA+GGG | + | chr5.3:68132350-68132369 | None:intergenic | 40.0% | |
| CCCTAGATGTAGGTCATATT+GGG | - | chr5.3:68132347-68132366 | MS.gene29734:intron | 40.0% | |
| CTGAATCAGATATAGCCAGT+TGG | + | chr5.3:68130870-68130889 | None:intergenic | 40.0% | |
| GAAAACCCCTTCTTATGGTT+AGG | - | chr5.3:68130593-68130612 | MS.gene29734:intron | 40.0% | |
| GAAACAAAGTGATCCTGGAA+AGG | - | chr5.3:68134304-68134323 | MS.gene29734:CDS | 40.0% | |
| GATAACCTCAAAGATCACAG+TGG | + | chr5.3:68130781-68130800 | None:intergenic | 40.0% | |
| GATCGTGTTCTTGGAATAGA+GGG | - | chr5.3:68133545-68133564 | MS.gene29734:CDS | 40.0% | |
| GATTTCCACTGTGATCTTTG+AGG | - | chr5.3:68130773-68130792 | MS.gene29734:intron | 40.0% | |
| GCTCAATCTTATGAGAAAGG+TGG | - | chr5.3:68132593-68132612 | MS.gene29734:intron | 40.0% | |
| GCTTGAGACTGTTTGGTTAT+TGG | - | chr5.3:68132477-68132496 | MS.gene29734:intron | 40.0% | |
| GGAATCCTTGATTTCTCTCA+AGG | - | chr5.3:68129521-68129540 | MS.gene29734:CDS | 40.0% | |
| GGCATCAACAATCGTAATCT+TGG | - | chr5.3:68133581-68133600 | MS.gene29734:CDS | 40.0% | |
| GGTCCTACATAATGATTAGG+GGG | + | chr5.3:68130390-68130409 | None:intergenic | 40.0% | |
| GTTACCCTTGAGAGAAATCA+AGG | + | chr5.3:68129529-68129548 | None:intergenic | 40.0% | |
| TAATGAACGAACTGGATTGC+CGG | - | chr5.3:68130672-68130691 | MS.gene29734:intron | 40.0% | |
| TGATGCTTGTCTAAGTCATG+TGG | + | chr5.3:68131383-68131402 | None:intergenic | 40.0% | |
| TTCTGCAACCGGAATTGAAA+AGG | + | chr5.3:68130411-68130430 | None:intergenic | 40.0% | |
| TTGAAAATGCACCTCCTGTT+CGG | - | chr5.3:68130623-68130642 | MS.gene29734:intron | 40.0% | |
| TTGACTTCAGCAATCAATCC+CGG | + | chr5.3:68130694-68130713 | None:intergenic | 40.0% | |
| TTGCTGATCACAGAAACTAG+CGG | + | chr5.3:68131034-68131053 | None:intergenic | 40.0% | |
| ! | AATAACGGCTCTAGCACTAT+AGG | - | chr5.3:68130898-68130917 | MS.gene29734:CDS | 40.0% |
| ! | ATAACGGCTCTAGCACTATA+GGG | - | chr5.3:68130899-68130918 | MS.gene29734:CDS | 40.0% |
| ! | CCAAATTTTCAAAGCTTCCC+TGG | + | chr5.3:68132795-68132814 | None:intergenic | 40.0% |
| ! | CTCCTGTTCGGGATTTTATT+GGG | - | chr5.3:68130635-68130654 | MS.gene29734:intron | 40.0% |
| ! | GATATGTTGCTTGAAGGGTT+TGG | + | chr5.3:68131627-68131646 | None:intergenic | 40.0% |
| ! | GCCATGTTTCTTATTTGTGC+TGG | - | chr5.3:68133454-68133473 | MS.gene29734:CDS | 40.0% |
| ! | GGTTGAAGCACTCAAAGTTA+AGG | - | chr5.3:68130287-68130306 | MS.gene29734:CDS | 40.0% |
| ! | TCCTGTTCGGGATTTTATTG+GGG | - | chr5.3:68130636-68130655 | MS.gene29734:intron | 40.0% |
| ! | TGTTGTTGCTTGAGACTGTT+TGG | - | chr5.3:68132470-68132489 | MS.gene29734:intron | 40.0% |
| !! | AACAGGAGGTGCATTTTCAA+GGG | + | chr5.3:68130623-68130642 | None:intergenic | 40.0% |
| !! | CCAGGGAAGCTTTGAAAATT+TGG | - | chr5.3:68132792-68132811 | MS.gene29734:intron | 40.0% |
| !! | GGATTTTATTGGGGCTCTAA+GGG | - | chr5.3:68130645-68130664 | MS.gene29734:intron | 40.0% |
| !! | TGCTTTTGGGTGAGATTCTT+GGG | - | chr5.3:68132030-68132049 | MS.gene29734:intron | 40.0% |
| !!! | ATGTTTGTTTTGGCTCCAAC+TGG | - | chr5.3:68130852-68130871 | MS.gene29734:CDS | 40.0% |
| AACCACAGATTCACCAGATG+TGG | + | chr5.3:68130271-68130290 | None:intergenic | 45.0% | |
| AAGAAGGCTTCACCAAGTAG+AGG | - | chr5.3:68130712-68130731 | MS.gene29734:intron | 45.0% | |
| AATGAACGAACTGGATTGCC+GGG | - | chr5.3:68130673-68130692 | MS.gene29734:intron | 45.0% | |
| ACAAGAACCAGCTACAGTGT+AGG | + | chr5.3:68133389-68133408 | None:intergenic | 45.0% | |
| ACACATCTAAGTTCGTGGTG+TGG | - | chr5.3:68132520-68132539 | MS.gene29734:intron | 45.0% | |
| ACACCACGAACTTAGATGTG+TGG | + | chr5.3:68132521-68132540 | None:intergenic | 45.0% | |
| ACCACGAAGAAGCTTCTTGA+AGG | - | chr5.3:68133720-68133739 | MS.gene29734:intron | 45.0% | |
| ACCCCTTCTTATGGTTAGGA+AGG | - | chr5.3:68130597-68130616 | MS.gene29734:intron | 45.0% | |
| AGGGAATTCGATCGTGTTCT+TGG | - | chr5.3:68133536-68133555 | MS.gene29734:CDS | 45.0% | |
| AGGTCATATTGGGCCAAACT+GGG | - | chr5.3:68132357-68132376 | MS.gene29734:intron | 45.0% | |
| AGTTGGAGGAATAGTGGTTC+TGG | + | chr5.3:68129583-68129602 | None:intergenic | 45.0% | |
| ATAAGGAGAAGACCACCAAC+TGG | - | chr5.3:68130363-68130382 | MS.gene29734:intron | 45.0% | |
| CCAATAAAATCCCGAACAGG+AGG | + | chr5.3:68130637-68130656 | None:intergenic | 45.0% | |
| CCCCTAGATGTAGGTCATAT+TGG | - | chr5.3:68132346-68132365 | MS.gene29734:intron | 45.0% | |
| CGATCGTGTTCTTGGAATAG+AGG | - | chr5.3:68133544-68133563 | MS.gene29734:CDS | 45.0% | |
| CTCTACTATGCTCGATCGAA+AGG | - | chr5.3:68132985-68133004 | MS.gene29734:intron | 45.0% | |
| GATTAGGCAGAGCCTAATGA+AGG | - | chr5.3:68130231-68130250 | MS.gene29734:intron | 45.0% | |
| GCAAAACTGTTCATTCCGCA+AGG | - | chr5.3:68131759-68131778 | MS.gene29734:intron | 45.0% | |
| GCCCAATATGACCTACATCT+AGG | + | chr5.3:68132351-68132370 | None:intergenic | 45.0% | |
| GCCTTCCTAACCATAAGAAG+GGG | + | chr5.3:68130601-68130620 | None:intergenic | 45.0% | |
| GCTACAACACTGTAGCATAG+CGG | - | chr5.3:68130996-68131015 | MS.gene29734:intron | 45.0% | |
| GGAAGAGATTGTGTGGAACA+AGG | - | chr5.3:68130458-68130477 | MS.gene29734:intron | 45.0% | |
| GGACCCCCTAATCATTATGT+AGG | - | chr5.3:68130384-68130403 | MS.gene29734:intron | 45.0% | |
| GGCCTTCCTAACCATAAGAA+GGG | + | chr5.3:68130602-68130621 | None:intergenic | 45.0% | |
| GGGTCGAACGACTTGAAAAA+GGG | - | chr5.3:68132146-68132165 | MS.gene29734:intron | 45.0% | |
| GGTCGAACGACTTGAAAAAG+GGG | - | chr5.3:68132147-68132166 | MS.gene29734:intron | 45.0% | |
| GGTGGTGAGATCTCATTAGA+GGG | - | chr5.3:68132079-68132098 | MS.gene29734:intron | 45.0% | |
| GTTCCACACATCTAAGTTCG+TGG | - | chr5.3:68132515-68132534 | MS.gene29734:intron | 45.0% | |
| GTTGGAGGAATAGTGGTTCT+GGG | + | chr5.3:68129582-68129601 | None:intergenic | 45.0% | |
| GTTTAGATGGTTGGGGAATC+TGG | - | chr5.3:68133864-68133883 | MS.gene29734:intron | 45.0% | |
| TAAGTTCGTGGTGTGGTTTG+AGG | - | chr5.3:68132527-68132546 | MS.gene29734:intron | 45.0% | |
| TAATGAGATCTCACCACCCA+AGG | + | chr5.3:68132077-68132096 | None:intergenic | 45.0% | |
| TAATGATTAGGGGGTCCAGT+TGG | + | chr5.3:68130381-68130400 | None:intergenic | 45.0% | |
| TAGACCCCTTTGAATCTCGT+TGG | - | chr5.3:68131063-68131082 | MS.gene29734:CDS | 45.0% | |
| TAGGTCATATTGGGCCAAAC+TGG | - | chr5.3:68132356-68132375 | MS.gene29734:intron | 45.0% | |
| TATTTCCCTCGTTCTGCAAC+CGG | + | chr5.3:68130422-68130441 | None:intergenic | 45.0% | |
| TCCTTCAAGAAGCTTCTTCG+TGG | + | chr5.3:68133724-68133743 | None:intergenic | 45.0% | |
| TCTCTCAAGATGCCTCTACT+TGG | + | chr5.3:68130727-68130746 | None:intergenic | 45.0% | |
| TGAAAATGCACCTCCTGTTC+GGG | - | chr5.3:68130624-68130643 | MS.gene29734:intron | 45.0% | |
| TGGGATTGGAAGAGAACGAA+GGG | + | chr5.3:68129563-68129582 | None:intergenic | 45.0% | |
| TGGGTCGAACGACTTGAAAA+AGG | - | chr5.3:68132145-68132164 | MS.gene29734:intron | 45.0% | |
| TGTGATACCTACACTGTAGC+TGG | - | chr5.3:68133379-68133398 | MS.gene29734:intron | 45.0% | |
| TTGGGTGAGATTCTTGGGTT+GGG | - | chr5.3:68132035-68132054 | MS.gene29734:intron | 45.0% | |
| TTTGGGTGAGATTCTTGGGT+TGG | - | chr5.3:68132034-68132053 | MS.gene29734:intron | 45.0% | |
| ! | CACTTTTCATTCACCTTGGG+TGG | - | chr5.3:68132061-68132080 | MS.gene29734:intron | 45.0% |
| ! | CCTCCTGTTCGGGATTTTAT+TGG | - | chr5.3:68130634-68130653 | MS.gene29734:intron | 45.0% |
| ! | GCGAAGGGTTAAGTGCTTTT+GGG | - | chr5.3:68132017-68132036 | MS.gene29734:intron | 45.0% |
| ! | GGGATTTTATTGGGGCTCTA+AGG | - | chr5.3:68130644-68130663 | MS.gene29734:intron | 45.0% |
| ! | TACGTTTTCTGTTCGAGCAC+AGG | - | chr5.3:68129635-68129654 | MS.gene29734:intron | 45.0% |
| !! | AGGAATAGTGGTTCTGGGAT+TGG | + | chr5.3:68129577-68129596 | None:intergenic | 45.0% |
| !! | GAACAGGAGGTGCATTTTCA+AGG | + | chr5.3:68130624-68130643 | None:intergenic | 45.0% |
| !! | GAAGCCACAGTTGATGACTA+AGG | + | chr5.3:68133657-68133676 | None:intergenic | 45.0% |
| !! | GACTTGAGTTGGAGGAATAG+TGG | + | chr5.3:68129589-68129608 | None:intergenic | 45.0% |
| !! | GTGCTTTTGGGTGAGATTCT+TGG | - | chr5.3:68132029-68132048 | MS.gene29734:intron | 45.0% |
| !!! | TTTTATTGGGGCTCTAAGGG+CGG | - | chr5.3:68130648-68130667 | MS.gene29734:intron | 45.0% |
| !! | TAAATTTAAATTAAAATTAG+GGG | + | chr5.3:68134079-68134098 | None:intergenic | 5.0% |
| AAGCTTCTTGAAGGAGAGCG+AGG | - | chr5.3:68133729-68133748 | MS.gene29734:intron | 50.0% | |
| AATGAGGTTGCTGCTACCCA+AGG | - | chr5.3:68130333-68130352 | MS.gene29734:CDS | 50.0% | |
| ACACGCAACACGCTAAACAG+TGG | + | chr5.3:68131693-68131712 | None:intergenic | 50.0% | |
| AGCCACATCTGGTGAATCTG+TGG | - | chr5.3:68130266-68130285 | MS.gene29734:intron | 50.0% | |
| CAATCGAGCGTCATGCACAT+AGG | + | chr5.3:68133136-68133155 | None:intergenic | 50.0% | |
| CAATTCCGGTTGCAGAACGA+GGG | - | chr5.3:68130414-68130433 | MS.gene29734:intron | 50.0% | |
| CGGACCTTAGTCATCAACTG+TGG | - | chr5.3:68133650-68133669 | MS.gene29734:intron | 50.0% | |
| CTATGTGCATGACGCTCGAT+TGG | - | chr5.3:68133134-68133153 | MS.gene29734:CDS | 50.0% | |
| CTGGGATTGGAAGAGAACGA+AGG | + | chr5.3:68129564-68129583 | None:intergenic | 50.0% | |
| GCCCCAATAAAATCCCGAAC+AGG | + | chr5.3:68130640-68130659 | None:intergenic | 50.0% | |
| GCTCTAGCACTATAGGGTAG+TGG | - | chr5.3:68130905-68130924 | MS.gene29734:CDS | 50.0% | |
| GGCAGAGCCTAATGAAGGTT+CGG | - | chr5.3:68130236-68130255 | MS.gene29734:intron | 50.0% | |
| GGGCCTTCCTAACCATAAGA+AGG | + | chr5.3:68130603-68130622 | None:intergenic | 50.0% | |
| GGGTGGTGAGATCTCATTAG+AGG | - | chr5.3:68132078-68132097 | MS.gene29734:intron | 50.0% | |
| GGTGAGATCTCATTAGAGGG+AGG | - | chr5.3:68132082-68132101 | MS.gene29734:intron | 50.0% | |
| TCAATTCCGGTTGCAGAACG+AGG | - | chr5.3:68130413-68130432 | MS.gene29734:intron | 50.0% | |
| TCGGCTACAATAGCCACATC+TGG | - | chr5.3:68130255-68130274 | MS.gene29734:intron | 50.0% | |
| ! | GGCGAAGGGTTAAGTGCTTT+TGG | - | chr5.3:68132016-68132035 | MS.gene29734:intron | 50.0% |
| ! | TTTTCCCTGCCAAAACCGCA+AGG | - | chr5.3:68131830-68131849 | MS.gene29734:intron | 50.0% |
| !! | ATAGAGGGCGTTGAGCTCAT+TGG | - | chr5.3:68133560-68133579 | MS.gene29734:CDS | 50.0% |
| AGGGCGGCTAATGAACGAAC+TGG | - | chr5.3:68130664-68130683 | MS.gene29734:intron | 55.0% | |
| CAAGGACAAAGAAGTCGCGC+AGG | - | chr5.3:68130476-68130495 | MS.gene29734:intron | 55.0% | |
| CTCCTCTCTCCCCTAGATGT+AGG | - | chr5.3:68132337-68132356 | MS.gene29734:intron | 55.0% | |
| CTTGCACCCAGTGGACCATT+GGG | - | chr5.3:68131870-68131889 | MS.gene29734:intron | 55.0% | |
| GACCTACATCTAGGGGAGAG+AGG | + | chr5.3:68132342-68132361 | None:intergenic | 55.0% | |
| TGATTAGGGGGTCCAGTTGG+TGG | + | chr5.3:68130378-68130397 | None:intergenic | 55.0% | |
| !! | ATTCCGCAAGGCGTTGACAG+AGG | - | chr5.3:68131771-68131790 | MS.gene29734:intron | 55.0% |
| !! | TGGACTGGCAGCTCTTGTTG+AGG | - | chr5.3:68133086-68133105 | MS.gene29734:intron | 55.0% |
| !! | TTCCGCAAGGCGTTGACAGA+GGG | - | chr5.3:68131772-68131791 | MS.gene29734:intron | 55.0% |
| ACCCAGTGGACCATTGGGCA+GGG | - | chr5.3:68131875-68131894 | MS.gene29734:intron | 60.0% | |
| CCAATGGTCCACTGGGTGCA+AGG | + | chr5.3:68131872-68131891 | None:intergenic | 60.0% | |
| CCTTGCACCCAGTGGACCAT+TGG | - | chr5.3:68131869-68131888 | MS.gene29734:intron | 60.0% | |
| TCCCTGCCAAAACCGCAAGG+CGG | - | chr5.3:68131833-68131852 | MS.gene29734:intron | 60.0% | |
| !! | TCCGCAAGGCGTTGACAGAG+GGG | - | chr5.3:68131773-68131792 | MS.gene29734:intron | 60.0% |
| AAACCGCAAGGCGGCCTCAC+TGG | - | chr5.3:68131842-68131861 | MS.gene29734:intron | 65.0% | |
| AACCGCAAGGCGGCCTCACT+GGG | - | chr5.3:68131843-68131862 | MS.gene29734:intron | 65.0% | |
| ACCCCTGCCCAATGGTCCAC+TGG | + | chr5.3:68131880-68131899 | None:intergenic | 65.0% | |
| CACCCAGTGGACCATTGGGC+AGG | - | chr5.3:68131874-68131893 | MS.gene29734:intron | 65.0% | |
| CACCTTGCACCCCTGCCCAA+TGG | + | chr5.3:68131888-68131907 | None:intergenic | 65.0% | |
| CCCAGTGGACCATTGGGCAG+GGG | - | chr5.3:68131876-68131895 | MS.gene29734:intron | 65.0% | |
| CCCCTGCCCAATGGTCCACT+GGG | + | chr5.3:68131879-68131898 | None:intergenic | 65.0% | |
| GCCCCTCTGTCAACGCCTTG+CGG | + | chr5.3:68131777-68131796 | None:intergenic | 65.0% | |
| GGGTGCAAGGTGCAGGGACT+AGG | - | chr5.3:68131896-68131915 | MS.gene29734:intron | 65.0% | |
| ! | GACCATTGGGCAGGGGTGCA+AGG | - | chr5.3:68131883-68131902 | MS.gene29734:intron | 65.0% |
| ! | GTGAGGCCGCCTTGCGGTTT+TGG | + | chr5.3:68131842-68131861 | None:intergenic | 65.0% |
| !! | GCCGCCTTGCGGTTTTGGCA+GGG | + | chr5.3:68131837-68131856 | None:intergenic | 65.0% |
| ACCCCAGTGAGGCCGCCTTG+CGG | + | chr5.3:68131848-68131867 | None:intergenic | 70.0% | |
| ACCGCAAGGCGGCCTCACTG+GGG | - | chr5.3:68131844-68131863 | MS.gene29734:intron | 70.0% | |
| ! | CTGGGGTGCCTTGCACCCAG+TGG | - | chr5.3:68131861-68131880 | MS.gene29734:intron | 70.0% |
| ! | GGGCAGGGGTGCAAGGTGCA+GGG | - | chr5.3:68131890-68131909 | MS.gene29734:intron | 70.0% |
| ! | GGGTGCAAGGCACCCCAGTG+AGG | + | chr5.3:68131859-68131878 | None:intergenic | 70.0% |
| ! | TGGGCAGGGGTGCAAGGTGC+AGG | - | chr5.3:68131889-68131908 | MS.gene29734:intron | 70.0% |
| !! | GGCCGCCTTGCGGTTTTGGC+AGG | + | chr5.3:68131838-68131857 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 68129519 | 68134364 | 68129519 | ID=MS.gene29734 |
| chr5.3 | mRNA | 68129519 | 68134364 | 68129519 | ID=MS.gene29734.t1;Parent=MS.gene29734 |
| chr5.3 | exon | 68134227 | 68134364 | 68134227 | ID=MS.gene29734.t1.exon1;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68134227 | 68134364 | 68134227 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68133386 | 68133646 | 68133386 | ID=MS.gene29734.t1.exon2;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68133386 | 68133646 | 68133386 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68133124 | 68133300 | 68133124 | ID=MS.gene29734.t1.exon3;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68133124 | 68133300 | 68133124 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68131225 | 68131299 | 68131225 | ID=MS.gene29734.t1.exon4;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68131225 | 68131299 | 68131225 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68131043 | 68131087 | 68131043 | ID=MS.gene29734.t1.exon5;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68131043 | 68131087 | 68131043 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68130776 | 68130940 | 68130776 | ID=MS.gene29734.t1.exon6;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68130776 | 68130940 | 68130776 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68130281 | 68130359 | 68130281 | ID=MS.gene29734.t1.exon7;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68130281 | 68130359 | 68130281 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68130104 | 68130186 | 68130104 | ID=MS.gene29734.t1.exon8;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68130104 | 68130186 | 68130104 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68129945 | 68130013 | 68129945 | ID=MS.gene29734.t1.exon9;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68129945 | 68130013 | 68129945 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| chr5.3 | exon | 68129519 | 68129602 | 68129519 | ID=MS.gene29734.t1.exon10;Parent=MS.gene29734.t1 |
| chr5.3 | CDS | 68129519 | 68129602 | 68129519 | ID=cds.MS.gene29734.t1;Parent=MS.gene29734.t1 |
| Gene Sequence |
| Protein sequence |
