Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30011.t1 | XP_024627025.1 | 86 | 322 | 33 | 3 | 1 | 322 | 8 | 317 | 4.10E-145 | 524.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30011.t1 | O23939 | 68.6 | 322 | 87 | 5 | 2 | 322 | 14 | 322 | 2.7e-116 | 419.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30011.t1 | A0A072TZA9 | 86.0 | 322 | 33 | 3 | 1 | 322 | 8 | 317 | 3.0e-145 | 524.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055926 | MS.gene30011 | 0.800188 | 1.62E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30011.t1 | MTR_7g034395 | 85.714 | 322 | 34 | 3 | 1 | 322 | 8 | 317 | 1.24e-180 | 501 |
| MS.gene30011.t1 | MTR_8g064610 | 64.286 | 322 | 102 | 4 | 1 | 322 | 76 | 384 | 5.30e-139 | 399 |
| MS.gene30011.t1 | MTR_6g012170 | 63.467 | 323 | 102 | 3 | 2 | 322 | 12 | 320 | 2.24e-126 | 364 |
| MS.gene30011.t1 | MTR_6g012160 | 62.963 | 297 | 94 | 3 | 2 | 296 | 12 | 294 | 1.31e-110 | 324 |
| MS.gene30011.t1 | MTR_8g035630 | 45.511 | 323 | 158 | 8 | 2 | 322 | 5 | 311 | 4.45e-75 | 234 |
| MS.gene30011.t1 | MTR_8g035880 | 45.455 | 319 | 156 | 8 | 2 | 318 | 5 | 307 | 1.25e-73 | 230 |
| MS.gene30011.t1 | MTR_6g012140 | 61.538 | 143 | 53 | 1 | 179 | 321 | 3 | 143 | 8.90e-56 | 178 |
| MS.gene30011.t1 | MTR_4g036310 | 32.378 | 349 | 178 | 15 | 1 | 318 | 6 | 327 | 9.27e-33 | 124 |
| MS.gene30011.t1 | MTR_1319s0010 | 71.622 | 74 | 21 | 0 | 91 | 164 | 21 | 94 | 3.57e-29 | 108 |
| MS.gene30011.t1 | MTR_4g033205 | 30.372 | 349 | 189 | 13 | 1 | 320 | 6 | 329 | 3.66e-28 | 112 |
| MS.gene30011.t1 | MTR_4g032995 | 30.372 | 349 | 189 | 13 | 1 | 320 | 6 | 329 | 6.34e-28 | 111 |
| MS.gene30011.t1 | MTR_6g012100 | 74.194 | 62 | 16 | 0 | 261 | 322 | 8 | 69 | 2.08e-27 | 102 |
| MS.gene30011.t1 | MTR_2g012420 | 27.586 | 348 | 197 | 13 | 1 | 318 | 1 | 323 | 1.41e-25 | 104 |
| MS.gene30011.t1 | MTR_4g050760 | 28.869 | 336 | 183 | 14 | 14 | 318 | 13 | 323 | 2.61e-24 | 101 |
| MS.gene30011.t1 | MTR_2g012380 | 28.869 | 336 | 183 | 14 | 14 | 318 | 13 | 323 | 2.61e-24 | 101 |
| MS.gene30011.t1 | MTR_7g055743 | 30.124 | 322 | 180 | 9 | 21 | 317 | 65 | 366 | 3.81e-24 | 101 |
| MS.gene30011.t1 | MTR_2g012380 | 30.290 | 241 | 138 | 8 | 25 | 257 | 23 | 241 | 2.81e-21 | 91.7 |
| MS.gene30011.t1 | MTR_6g039950 | 61.667 | 60 | 23 | 0 | 3 | 62 | 21 | 80 | 2.93e-21 | 86.7 |
| MS.gene30011.t1 | MTR_4g036260 | 31.250 | 256 | 142 | 7 | 89 | 320 | 63 | 308 | 7.47e-21 | 91.3 |
| MS.gene30011.t1 | MTR_2g078520 | 29.412 | 340 | 182 | 12 | 16 | 318 | 40 | 358 | 7.80e-20 | 89.4 |
| MS.gene30011.t1 | MTR_4g086400 | 25.360 | 347 | 199 | 12 | 8 | 318 | 158 | 480 | 1.20e-16 | 80.9 |
| MS.gene30011.t1 | MTR_2g012420 | 27.660 | 235 | 137 | 8 | 114 | 318 | 21 | 252 | 1.58e-16 | 78.2 |
| MS.gene30011.t1 | MTR_4g086400 | 25.904 | 332 | 189 | 11 | 27 | 322 | 314 | 624 | 1.83e-16 | 80.5 |
| MS.gene30011.t1 | MTR_4g050710 | 27.660 | 235 | 137 | 8 | 114 | 318 | 15 | 246 | 1.93e-16 | 77.8 |
| MS.gene30011.t1 | MTR_4g036170 | 29.218 | 243 | 139 | 7 | 101 | 318 | 68 | 302 | 9.09e-16 | 77.0 |
| MS.gene30011.t1 | MTR_4g086410 | 29.327 | 208 | 113 | 6 | 148 | 322 | 418 | 624 | 9.27e-16 | 78.2 |
| MS.gene30011.t1 | MTR_2g012420 | 27.895 | 190 | 105 | 7 | 158 | 318 | 5 | 191 | 2.60e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30011.t1 | AT1G23740 | 62.112 | 322 | 109 | 4 | 1 | 322 | 78 | 386 | 1.31e-129 | 375 |
| MS.gene30011.t1 | AT4G21580 | 29.598 | 348 | 190 | 13 | 1 | 318 | 1 | 323 | 9.25e-30 | 115 |
| MS.gene30011.t1 | AT4G21580 | 29.310 | 348 | 185 | 14 | 1 | 318 | 1 | 317 | 1.12e-27 | 110 |
| MS.gene30011.t1 | AT4G13010 | 29.395 | 347 | 195 | 12 | 1 | 320 | 6 | 329 | 1.28e-21 | 94.0 |
| MS.gene30011.t1 | AT4G21580 | 27.737 | 274 | 154 | 9 | 75 | 318 | 31 | 290 | 6.26e-21 | 91.3 |
| MS.gene30011.t1 | AT3G15090 | 32.114 | 246 | 142 | 9 | 14 | 253 | 44 | 270 | 1.89e-20 | 91.3 |
| MS.gene30011.t1 | AT3G56460 | 28.743 | 334 | 172 | 15 | 23 | 318 | 31 | 336 | 9.67e-16 | 77.4 |
| MS.gene30011.t1 | AT1G49670 | 28.846 | 208 | 114 | 6 | 148 | 322 | 414 | 620 | 2.64e-15 | 77.0 |
| MS.gene30011.t1 | AT1G49670 | 27.751 | 209 | 118 | 5 | 142 | 318 | 432 | 639 | 3.26e-15 | 76.6 |
Find 87 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCTTGCCAAGCATGTTTA+TGG | 0.135644 | 7.1:-62130035 | MS.gene30011:CDS |
| TTTGGGGATGAAGAAATTTA+AGG | 0.160234 | 7.1:-62131938 | MS.gene30011:CDS |
| TGTCGACTTACACTTGTAAA+TGG | 0.210938 | 7.1:+62132471 | None:intergenic |
| ACCTTTCCACTCTCCAAGTA+TGG | 0.212646 | 7.1:+62128799 | None:intergenic |
| TGAGACTGAGAAGGCATTTA+AGG | 0.213029 | 7.1:-62128926 | MS.gene30011:CDS |
| AGTTGGAACCCTTGTTATTC+AGG | 0.237788 | 7.1:-62131680 | MS.gene30011:intron |
| GTCACTCTGTTGATGTTCTA+AGG | 0.250595 | 7.1:-62133245 | MS.gene30011:CDS |
| GCTCAATAATTCTAGTTTCT+TGG | 0.252495 | 7.1:+62129983 | None:intergenic |
| GCTTCAACAGATTGAGAAAA+TGG | 0.253952 | 7.1:+62128745 | None:intergenic |
| GCTCTGATCTAGACTGCTTT+GGG | 0.307855 | 7.1:-62131955 | MS.gene30011:intron |
| TCATCCTTCACTTGAGGAAT+AGG | 0.327413 | 7.1:+62133207 | None:intergenic |
| CCCTCGGAGACGGCCACATT+TGG | 0.330523 | 7.1:+62132498 | None:intergenic |
| AAGGTTGGGGATGAAGTTTA+TGG | 0.343565 | 7.1:-62131919 | MS.gene30011:CDS |
| TGAAATGTATTACTGGTAAA+GGG | 0.348133 | 7.1:+62133100 | None:intergenic |
| GGCTCTGATCTAGACTGCTT+TGG | 0.353592 | 7.1:-62131956 | MS.gene30011:intron |
| TTCTCCTTTGTGTAATCAAT+AGG | 0.364164 | 7.1:+62129942 | None:intergenic |
| AGCACCACCAAGCACAAGTA+TGG | 0.366133 | 7.1:+62131708 | None:intergenic |
| CTAGAATTATTGAGCAACTT+AGG | 0.383073 | 7.1:-62129975 | MS.gene30011:CDS |
| ACTTGAGGAATAGGCACGTT+TGG | 0.384578 | 7.1:+62133216 | None:intergenic |
| CTTGGTGGTGCTGGTGGAGT+TGG | 0.389611 | 7.1:-62131697 | MS.gene30011:CDS |
| ATACTTGTGCTTGGTGGTGC+TGG | 0.393903 | 7.1:-62131706 | MS.gene30011:CDS |
| GGATGAAGAAATTTAAGGTT+GGG | 0.403120 | 7.1:-62131933 | MS.gene30011:CDS |
| ATGAAATGTATTACTGGTAA+AGG | 0.407366 | 7.1:+62133099 | None:intergenic |
| TGAGTAAGTCCAAGCTTTCA+TGG | 0.409899 | 7.1:+62133275 | None:intergenic |
| TTGGAATATCCAAAGGTCAT+TGG | 0.411075 | 7.1:-62131877 | MS.gene30011:CDS |
| CTTACAAAATTTACCAATTG+TGG | 0.411884 | 7.1:+62132442 | None:intergenic |
| GCCAGTGAACCAATGACCTT+TGG | 0.412773 | 7.1:+62131868 | None:intergenic |
| CCTCGGAGACGGCCACATTT+GGG | 0.412836 | 7.1:+62132499 | None:intergenic |
| CTGGAAACTGGTAGAGCTAC+TGG | 0.413674 | 7.1:-62128712 | MS.gene30011:CDS |
| AGAAAATGGAAATGGACTCT+TGG | 0.417151 | 7.1:+62128759 | None:intergenic |
| ACAGATTGAGAAAATGGAAA+TGG | 0.418366 | 7.1:+62128751 | None:intergenic |
| GCTTGGACTTACTCAGAATA+TGG | 0.426148 | 7.1:-62133267 | MS.gene30011:CDS |
| TGCTTATGAAGGCCTTGAAC+GGG | 0.426798 | 7.1:-62131752 | MS.gene30011:CDS |
| TCGCATTGATTATAAGAGAA+TGG | 0.430591 | 7.1:-62133148 | MS.gene30011:CDS |
| GAAAATGGAAATGGACTCTT+GGG | 0.436286 | 7.1:+62128760 | None:intergenic |
| AATATTGCTGGTGGAAGTCC+TGG | 0.447293 | 7.1:+62128865 | None:intergenic |
| CAGAGAATCCAACCCGTTCA+AGG | 0.463482 | 7.1:+62131740 | None:intergenic |
| TTTCTCTAAGATAGCCCCAT+TGG | 0.466307 | 7.1:+62128828 | None:intergenic |
| GGGATGAAGAAATTTAAGGT+TGG | 0.472110 | 7.1:-62131934 | MS.gene30011:CDS |
| GAACGGGTTGGATTCTCTGC+TGG | 0.472498 | 7.1:-62131736 | MS.gene30011:CDS |
| GTCGACATTCCAACCACAAT+TGG | 0.473731 | 7.1:-62132455 | MS.gene30011:intron |
| CAAAATTTACCAATTGTGGT+TGG | 0.479544 | 7.1:+62132446 | None:intergenic |
| TGATATCAATGTGAAAGCTT+TGG | 0.479645 | 7.1:-62131896 | MS.gene30011:CDS |
| TCCAAAGGTCATTGGTTCAC+TGG | 0.483918 | 7.1:-62131869 | MS.gene30011:CDS |
| GCTAGATGTAGCTGCTACCT+TGG | 0.487614 | 7.1:+62130007 | None:intergenic |
| GTCGACTTACACTTGTAAAT+GGG | 0.488403 | 7.1:+62132472 | None:intergenic |
| ACAATTGAGACTGCTTATGA+AGG | 0.494069 | 7.1:-62131763 | MS.gene30011:CDS |
| CTATGTTGAATATCATGGTA+TGG | 0.499927 | 7.1:+62128672 | None:intergenic |
| AAATAGCCACCATGAAAGCT+TGG | 0.500594 | 7.1:-62133284 | None:intergenic |
| CCAAATGTGGCCGTCTCCGA+GGG | 0.504861 | 7.1:-62132498 | MS.gene30011:CDS |
| GGACTCTTGGGATCAAGTAC+TGG | 0.506168 | 7.1:+62128772 | None:intergenic |
| CTCTAAGATAGCCCCATTGG+AGG | 0.507854 | 7.1:+62128831 | None:intergenic |
| TGCTGCAGAAGAGATATCAT+TGG | 0.517901 | 7.1:-62131836 | MS.gene30011:CDS |
| AGCTCTACCAGTTTCCAGAT+AGG | 0.525775 | 7.1:+62128717 | None:intergenic |
| CTTGTGCTTGGTGGTGCTGG+TGG | 0.525874 | 7.1:-62131703 | MS.gene30011:CDS |
| TATGTTGAATATCATGGTAT+GGG | 0.531361 | 7.1:+62128673 | None:intergenic |
| TATGAAGGCCTTGAACGGGT+TGG | 0.533666 | 7.1:-62131748 | MS.gene30011:CDS |
| TTTAAGGCTCTAAAAGAAGA+TGG | 0.534063 | 7.1:-62128910 | MS.gene30011:CDS |
| AAAACCACATCAAACTTCTC+CGG | 0.539327 | 7.1:+62129906 | None:intergenic |
| GGTAAATCCATACTTGTGCT+TGG | 0.539846 | 7.1:-62131715 | MS.gene30011:CDS |
| CTGCTTATGAAGGCCTTGAA+CGG | 0.544198 | 7.1:-62131753 | MS.gene30011:CDS |
| GAAATGTATTACTGGTAAAG+GGG | 0.548507 | 7.1:+62133101 | None:intergenic |
| ATTGATTATAAGAGAATGGA+AGG | 0.550432 | 7.1:-62133144 | MS.gene30011:CDS |
| GCATGTTTATGGCGCTTCCA+AGG | 0.551062 | 7.1:-62130024 | MS.gene30011:CDS |
| GTTCTGACAGTTGCACTACC+AGG | 0.560753 | 7.1:-62128883 | MS.gene30011:CDS |
| AAATCCATACTTGTGCTTGG+TGG | 0.561864 | 7.1:-62131712 | MS.gene30011:CDS |
| ACTTGATCATCCTTCACTTG+AGG | 0.562607 | 7.1:+62133201 | None:intergenic |
| GATGAAGAAATTTAAGGTTG+GGG | 0.565259 | 7.1:-62131932 | MS.gene30011:CDS |
| AAATGGGATCCCCTCGGAGA+CGG | 0.568444 | 7.1:+62132488 | None:intergenic |
| GGAAGCGCCATAAACATGCT+TGG | 0.570105 | 7.1:+62130028 | None:intergenic |
| CTAAATCCATACTTGGAGAG+TGG | 0.574210 | 7.1:-62128805 | MS.gene30011:CDS |
| AGAGAAACTAAATCCATACT+TGG | 0.574746 | 7.1:-62128812 | MS.gene30011:CDS |
| TGCTTGCAGATTCCCAAATG+TGG | 0.576158 | 7.1:-62132511 | MS.gene30011:intron |
| CCCAAATGTGGCCGTCTCCG+AGG | 0.588590 | 7.1:-62132499 | MS.gene30011:CDS |
| TAAGCAGTCTCAATTGTCAA+AGG | 0.594753 | 7.1:+62131769 | None:intergenic |
| CGTGCCTATTCCTCAAGTGA+AGG | 0.603468 | 7.1:-62133211 | MS.gene30011:CDS |
| CCTTCCGGAGAAGTTTGATG+TGG | 0.603610 | 7.1:-62129910 | MS.gene30011:CDS |
| GAAAGCTTTGGAATATCCAA+AGG | 0.617695 | 7.1:-62131884 | MS.gene30011:CDS |
| TCCATACTTGGAGAGTGGAA+AGG | 0.619306 | 7.1:-62128800 | MS.gene30011:CDS |
| TAATAGATACCTGAATAACA+AGG | 0.622779 | 7.1:+62131671 | None:intergenic |
| CTCTGATCTAGACTGCTTTG+GGG | 0.627663 | 7.1:-62131954 | MS.gene30011:intron |
| CCACATCAAACTTCTCCGGA+AGG | 0.628057 | 7.1:+62129910 | None:intergenic |
| ACTTGTAAATGGGATCCCCT+CGG | 0.636060 | 7.1:+62132482 | None:intergenic |
| TTTCATTCTCTCCTCCAATG+GGG | 0.637931 | 7.1:-62128842 | MS.gene30011:CDS |
| TTTACCTATTGATTACACAA+AGG | 0.652450 | 7.1:-62129946 | MS.gene30011:CDS |
| AATAGATACCTGAATAACAA+GGG | 0.673123 | 7.1:+62131672 | None:intergenic |
| CAAATGTGGCCGTCTCCGAG+GGG | 0.685952 | 7.1:-62132497 | MS.gene30011:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATAGTTAAAATTTGT+TGG | - | chr7.1:62128936-62128955 | MS.gene30011:CDS | 10.0% |
| !! | TCAAAAAAGTAAATATTAAT+TGG | + | chr7.1:62130505-62130524 | None:intergenic | 10.0% |
| !!! | AATATATTGTTAATTACTTT+TGG | - | chr7.1:62132296-62132315 | MS.gene30011:intron | 10.0% |
| !!! | TAACATTTATAAGTTTTATA+AGG | + | chr7.1:62128914-62128933 | None:intergenic | 10.0% |
| !! | AACAATAATTTAGATGATTA+AGG | - | chr7.1:62132266-62132285 | MS.gene30011:intron | 15.0% |
| !! | AATAGAAAAATTTAGATTAG+AGG | - | chr7.1:62128971-62128990 | MS.gene30011:intron | 15.0% |
| !! | ACATATTTCCATTAAAAAAA+AGG | - | chr7.1:62130586-62130605 | MS.gene30011:intron | 15.0% |
| !! | TTTGAGAAATGATAAAAAAA+TGG | - | chr7.1:62132118-62132137 | MS.gene30011:intron | 15.0% |
| !!! | ATATTGTTTTTTTTGCTTAA+CGG | - | chr7.1:62131859-62131878 | MS.gene30011:CDS | 15.0% |
| !!! | TAATATTTAGAATTTAGTGT+TGG | + | chr7.1:62132752-62132771 | None:intergenic | 15.0% |
| !!! | TTCTTATTCCTTTTTTTTAA+TGG | + | chr7.1:62130597-62130616 | None:intergenic | 15.0% |
| !! | AAGAAAATGAAATGTATTAC+TGG | + | chr7.1:62128867-62128886 | None:intergenic | 20.0% |
| !! | ATTATGGAATAAAATTGGTA+GGG | + | chr7.1:62131530-62131549 | None:intergenic | 20.0% |
| !! | ATTATTGTAAATTCTCAATG+AGG | + | chr7.1:62129015-62129034 | None:intergenic | 20.0% |
| !! | CAACAAAAAGAAAAAAAGTA+TGG | + | chr7.1:62129788-62129807 | None:intergenic | 20.0% |
| !! | GATTGATTACATTTACTAAA+TGG | + | chr7.1:62132825-62132844 | None:intergenic | 20.0% |
| !! | GGTTAATGAATATAATAAGA+AGG | + | chr7.1:62132804-62132823 | None:intergenic | 20.0% |
| !! | GTTTAGTGTATGTTAAAAAA+GGG | - | chr7.1:62132194-62132213 | MS.gene30011:intron | 20.0% |
| !! | TCCTCAAAATTTAAAAAACA+GGG | - | chr7.1:62133003-62133022 | MS.gene30011:intron | 20.0% |
| !! | TCTCAAATATATGTATATAG+AGG | + | chr7.1:62132105-62132124 | None:intergenic | 20.0% |
| !! | TTCCTCAAAATTTAAAAAAC+AGG | - | chr7.1:62133002-62133021 | MS.gene30011:intron | 20.0% |
| !! | TTTAGTGTATGTTAAAAAAG+GGG | - | chr7.1:62132195-62132214 | MS.gene30011:intron | 20.0% |
| !!! | AAATATGACAACAATTTTGA+TGG | + | chr7.1:62132868-62132887 | None:intergenic | 20.0% |
| !!! | ATATTGTTAATTACTTTTGG+TGG | - | chr7.1:62132299-62132318 | MS.gene30011:intron | 20.0% |
| !!! | TAGTTATTTTTTTATGCTGA+TGG | + | chr7.1:62129205-62129224 | None:intergenic | 20.0% |
| !!! | TGTTTATAATAATGCCTTTT+TGG | - | chr7.1:62131892-62131911 | MS.gene30011:CDS | 20.0% |
| ! | AAAAATTTACCAATACGTGT+CGG | - | chr7.1:62130526-62130545 | MS.gene30011:intron | 25.0% |
| ! | AAAATAGATTAACCATGACT+TGG | - | chr7.1:62129667-62129686 | MS.gene30011:intron | 25.0% |
| ! | AACTGTAACGATTATTTAGA+CGG | - | chr7.1:62129610-62129629 | MS.gene30011:intron | 25.0% |
| ! | AATAGATACCTGAATAACAA+GGG | + | chr7.1:62130288-62130307 | None:intergenic | 25.0% |
| ! | AATATCATTTCTCATATACG+TGG | + | chr7.1:62132222-62132241 | None:intergenic | 25.0% |
| ! | AATCAGATTATCATCTACAT+TGG | + | chr7.1:62132474-62132493 | None:intergenic | 25.0% |
| ! | AGAAAAATTTAGATTAGAGG+AGG | - | chr7.1:62128974-62128993 | MS.gene30011:intron | 25.0% |
| ! | ATATCTTAACCCAAAACTTT+AGG | + | chr7.1:62132418-62132437 | None:intergenic | 25.0% |
| ! | ATGAAATGTATTACTGGTAA+AGG | + | chr7.1:62128861-62128880 | None:intergenic | 25.0% |
| ! | ATTGATTATAAGAGAATGGA+AGG | - | chr7.1:62128813-62128832 | MS.gene30011:CDS | 25.0% |
| ! | CAGTCATTATGGAATAAAAT+TGG | + | chr7.1:62131535-62131554 | None:intergenic | 25.0% |
| ! | CATTATGGAATAAAATTGGT+AGG | + | chr7.1:62131531-62131550 | None:intergenic | 25.0% |
| ! | CCTCAAAATTTAAAAAACAG+GGG | - | chr7.1:62133004-62133023 | MS.gene30011:intron | 25.0% |
| ! | CGTTTAGTGTATGTTAAAAA+AGG | - | chr7.1:62132193-62132212 | MS.gene30011:intron | 25.0% |
| ! | CTAATCCAAAATTTAGCTAT+TGG | + | chr7.1:62129055-62129074 | None:intergenic | 25.0% |
| ! | CTCAAAATTTAAAAAACAGG+GGG | - | chr7.1:62133005-62133024 | MS.gene30011:intron | 25.0% |
| ! | CTTACAAAATTTACCAATTG+TGG | + | chr7.1:62129518-62129537 | None:intergenic | 25.0% |
| ! | GATTTGATAGAATTTACACT+TGG | - | chr7.1:62129910-62129929 | MS.gene30011:CDS | 25.0% |
| ! | GGAAATATGTAAGACAATAT+CGG | + | chr7.1:62130576-62130595 | None:intergenic | 25.0% |
| ! | TAAATCTACACAAGAAAACA+GGG | + | chr7.1:62131731-62131750 | None:intergenic | 25.0% |
| ! | TAATAGATACCTGAATAACA+AGG | + | chr7.1:62130289-62130308 | None:intergenic | 25.0% |
| ! | TATCTTAACCCAAAACTTTA+GGG | + | chr7.1:62132417-62132436 | None:intergenic | 25.0% |
| ! | TGAAATGTATTACTGGTAAA+GGG | + | chr7.1:62128860-62128879 | None:intergenic | 25.0% |
| ! | TGTTCTTCTTATCTCTAAAT+GGG | - | chr7.1:62130871-62130890 | MS.gene30011:intron | 25.0% |
| ! | TTAAATCTACACAAGAAAAC+AGG | + | chr7.1:62131732-62131751 | None:intergenic | 25.0% |
| !! | ATGCAATGATAAAGATTTTC+AGG | + | chr7.1:62131757-62131776 | None:intergenic | 25.0% |
| !! | CAATCAAGATTTCAAGTAAA+AGG | + | chr7.1:62131688-62131707 | None:intergenic | 25.0% |
| !! | GGAGCAAAATATTGATTATT+TGG | + | chr7.1:62129767-62129786 | None:intergenic | 25.0% |
| !! | TAAACTATGTTGATTAGATG+AGG | + | chr7.1:62130363-62130382 | None:intergenic | 25.0% |
| !! | TAGCTATATTCTAATTTGTG+CGG | - | chr7.1:62131027-62131046 | MS.gene30011:intron | 25.0% |
| !! | TTGTAGAAACTATTAAGTTG+TGG | + | chr7.1:62132540-62132559 | None:intergenic | 25.0% |
| !! | TTTACCTATTGATTACACAA+AGG | - | chr7.1:62132011-62132030 | MS.gene30011:intron | 25.0% |
| !! | TTTTAACATACACTAAACGA+TGG | + | chr7.1:62132192-62132211 | None:intergenic | 25.0% |
| !!! | AATGGGAAACCATATTTTTT+TGG | + | chr7.1:62130676-62130695 | None:intergenic | 25.0% |
| !!! | ATGGGAAACCATATTTTTTT+GGG | + | chr7.1:62130675-62130694 | None:intergenic | 25.0% |
| !!! | ATGTATTTTAGAGAGTTTCT+TGG | - | chr7.1:62129331-62129350 | MS.gene30011:intron | 25.0% |
| !!! | ATGTTTTTTTTATACGCTGT+CGG | + | chr7.1:62130637-62130656 | None:intergenic | 25.0% |
| !!! | TCTACCTTTTTTAGAGTTTT+AGG | - | chr7.1:62132930-62132949 | MS.gene30011:intron | 25.0% |
| !!! | TGTATTTTAGAGAGTTTCTT+GGG | - | chr7.1:62129332-62129351 | MS.gene30011:intron | 25.0% |
| !!! | TTTAGAATTTAGTGTTGGTT+TGG | + | chr7.1:62132747-62132766 | None:intergenic | 25.0% |
| AAAAAACAAGCAGTATAGTG+AGG | + | chr7.1:62131291-62131310 | None:intergenic | 30.0% | |
| AAAAGGTAGAATACATAGAG+AGG | + | chr7.1:62132920-62132939 | None:intergenic | 30.0% | |
| AAAGGTAGAATACATAGAGA+GGG | + | chr7.1:62132919-62132938 | None:intergenic | 30.0% | |
| AAATCTACACAAGAAAACAG+GGG | + | chr7.1:62131730-62131749 | None:intergenic | 30.0% | |
| AAATTATCTTCCATCATTGC+TGG | - | chr7.1:62129166-62129185 | MS.gene30011:intron | 30.0% | |
| AAGTATATTGTTGAGAGTCA+TGG | + | chr7.1:62129818-62129837 | None:intergenic | 30.0% | |
| AATTTCTTATATCGCCGTAT+CGG | - | chr7.1:62131212-62131231 | MS.gene30011:intron | 30.0% | |
| ACAGATTGAGAAAATGGAAA+TGG | + | chr7.1:62133209-62133228 | None:intergenic | 30.0% | |
| AGAAGAGAAGAAGATATGAA+AGG | + | chr7.1:62130849-62130868 | None:intergenic | 30.0% | |
| AGAATGAAAAATATTGCTGG+TGG | + | chr7.1:62133104-62133123 | None:intergenic | 30.0% | |
| AGAGAAACTAAATCCATACT+TGG | - | chr7.1:62133145-62133164 | MS.gene30011:CDS | 30.0% | |
| ATAAAATTGGTAGGGATATC+TGG | + | chr7.1:62131522-62131541 | None:intergenic | 30.0% | |
| ATAGGAAATCCTTAATGTCA+CGG | - | chr7.1:62131643-62131662 | MS.gene30011:intron | 30.0% | |
| CAAAATTTACCAATTGTGGT+TGG | + | chr7.1:62129514-62129533 | None:intergenic | 30.0% | |
| CACAACAAAACAAACACATT+AGG | + | chr7.1:62130323-62130342 | None:intergenic | 30.0% | |
| CTAGAATTATTGAGCAACTT+AGG | - | chr7.1:62131982-62132001 | MS.gene30011:intron | 30.0% | |
| CTGTTCTTCTTATCTCTAAA+TGG | - | chr7.1:62130870-62130889 | MS.gene30011:intron | 30.0% | |
| CTTCACCATTTCTTAAGTAT+CGG | + | chr7.1:62130420-62130439 | None:intergenic | 30.0% | |
| CTTCTAACCCCAAAAAAATA+TGG | - | chr7.1:62130664-62130683 | MS.gene30011:intron | 30.0% | |
| GAAATGTATTACTGGTAAAG+GGG | + | chr7.1:62128859-62128878 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATATGAAA+GGG | + | chr7.1:62130848-62130867 | None:intergenic | 30.0% | |
| GAGAGAATGAAAAATATTGC+TGG | + | chr7.1:62133107-62133126 | None:intergenic | 30.0% | |
| GATGTTGAGATTGAGTTAAT+CGG | + | chr7.1:62130739-62130758 | None:intergenic | 30.0% | |
| TAAAAATTTGAGCTTTGCTG+AGG | - | chr7.1:62130154-62130173 | MS.gene30011:intron | 30.0% | |
| TCAAATGTGACTGACTATAT+AGG | - | chr7.1:62131625-62131644 | MS.gene30011:intron | 30.0% | |
| TCCAAAATTTAGCTATTGGT+AGG | + | chr7.1:62129051-62129070 | None:intergenic | 30.0% | |
| TCCAATACAAGCTCTTTATT+CGG | - | chr7.1:62132565-62132584 | MS.gene30011:intron | 30.0% | |
| TGATATCAATGTGAAAGCTT+TGG | - | chr7.1:62130061-62130080 | MS.gene30011:intron | 30.0% | |
| TGGAATTGATAAATGAGTGA+TGG | + | chr7.1:62129747-62129766 | None:intergenic | 30.0% | |
| TTATTAGAGTGTGGATTTCA+TGG | + | chr7.1:62132775-62132794 | None:intergenic | 30.0% | |
| TTCACCATTTCTTAAGTATC+GGG | + | chr7.1:62130419-62130438 | None:intergenic | 30.0% | |
| TTCTCCTTTGTGTAATCAAT+AGG | + | chr7.1:62132018-62132037 | None:intergenic | 30.0% | |
| TTGTAAATTCTCAATGAGGA+TGG | + | chr7.1:62129011-62129030 | None:intergenic | 30.0% | |
| TTTGGGGATGAAGAAATTTA+AGG | - | chr7.1:62130019-62130038 | MS.gene30011:CDS | 30.0% | |
| ! | AAACTATTAAGTTGTGGTCT+TGG | + | chr7.1:62132534-62132553 | None:intergenic | 30.0% |
| ! | ACCTACCAATAGCTAAATTT+TGG | - | chr7.1:62129047-62129066 | MS.gene30011:intron | 30.0% |
| ! | ACCTCCTAAAACTCTAAAAA+AGG | + | chr7.1:62132937-62132956 | None:intergenic | 30.0% |
| ! | AGAGACAAAGTATTACTCAT+GGG | + | chr7.1:62130791-62130810 | None:intergenic | 30.0% |
| ! | ATGATGGAAGATAATTTGAG+TGG | + | chr7.1:62129163-62129182 | None:intergenic | 30.0% |
| ! | CAAGATTTCAAGTAAAAGGT+CGG | + | chr7.1:62131684-62131703 | None:intergenic | 30.0% |
| ! | GATGAAGAAATTTAAGGTTG+GGG | - | chr7.1:62130025-62130044 | MS.gene30011:CDS | 30.0% |
| ! | GGATGAAGAAATTTAAGGTT+GGG | - | chr7.1:62130024-62130043 | MS.gene30011:CDS | 30.0% |
| ! | TCAGCAAAGCTCAAATTTTT+AGG | + | chr7.1:62130155-62130174 | None:intergenic | 30.0% |
| !! | AATTTAGTGTTGGTTTGGTT+TGG | + | chr7.1:62132742-62132761 | None:intergenic | 30.0% |
| !! | CTATTTTAAACCATTCGAAC+CGG | + | chr7.1:62129654-62129673 | None:intergenic | 30.0% |
| !! | GCTCAATAATTCTAGTTTCT+TGG | + | chr7.1:62131977-62131996 | None:intergenic | 30.0% |
| !! | TATTTTAAACCATTCGAACC+GGG | + | chr7.1:62129653-62129672 | None:intergenic | 30.0% |
| !! | TCGCATTGATTATAAGAGAA+TGG | - | chr7.1:62128809-62128828 | MS.gene30011:CDS | 30.0% |
| !! | TTTAAGGCTCTAAAAGAAGA+TGG | - | chr7.1:62133047-62133066 | MS.gene30011:intron | 30.0% |
| !!! | ACCTTTTTTAGAGTTTTAGG+AGG | - | chr7.1:62132933-62132952 | MS.gene30011:intron | 30.0% |
| !!! | CCCCTGTTTTTTAAATTTTG+AGG | + | chr7.1:62133007-62133026 | None:intergenic | 30.0% |
| !!! | CTAATGTGTTTGTTTTGTTG+TGG | - | chr7.1:62130321-62130340 | MS.gene30011:intron | 30.0% |
| !!! | TGGGAAACCATATTTTTTTG+GGG | + | chr7.1:62130674-62130693 | None:intergenic | 30.0% |
| !!! | TTTTTTAGAGTTTTAGGAGG+TGG | - | chr7.1:62132936-62132955 | MS.gene30011:intron | 30.0% |
| AAAACCACATCAAACTTCTC+CGG | + | chr7.1:62132054-62132073 | None:intergenic | 35.0% | |
| AAATGTTCCTTGTAGGGATA+GGG | + | chr7.1:62129424-62129443 | None:intergenic | 35.0% | |
| AAGGTAGAATACATAGAGAG+GGG | + | chr7.1:62132918-62132937 | None:intergenic | 35.0% | |
| AATACGATACGATACCGATA+CGG | + | chr7.1:62131229-62131248 | None:intergenic | 35.0% | |
| AATCTCAACATCAGCATCAT+CGG | - | chr7.1:62130747-62130766 | MS.gene30011:intron | 35.0% | |
| ACAATTGAGACTGCTTATGA+AGG | - | chr7.1:62130194-62130213 | MS.gene30011:intron | 35.0% | |
| AGATCAAACCATCTCTATCT+AGG | - | chr7.1:62129108-62129127 | MS.gene30011:intron | 35.0% | |
| AGTACTAATGCTGTTCTCAT+TGG | - | chr7.1:62130987-62131006 | MS.gene30011:intron | 35.0% | |
| ATACAAGCTCTTTATTCGGA+AGG | - | chr7.1:62132569-62132588 | MS.gene30011:intron | 35.0% | |
| ATGGAAGATAATTTGAGTGG+TGG | + | chr7.1:62129160-62129179 | None:intergenic | 35.0% | |
| ATGTAAGACAATATCGGTGT+CGG | + | chr7.1:62130570-62130589 | None:intergenic | 35.0% | |
| ATTGAACTAGACAGTTCAAC+TGG | - | chr7.1:62129571-62129590 | MS.gene30011:intron | 35.0% | |
| ATTGAGTTAATCGGTGGTAA+TGG | + | chr7.1:62130730-62130749 | None:intergenic | 35.0% | |
| CATTGTAAACCTTGACATTG+GGG | - | chr7.1:62131341-62131360 | MS.gene30011:intron | 35.0% | |
| CTCTTTATTCGGAAGGATAA+TGG | - | chr7.1:62132576-62132595 | MS.gene30011:intron | 35.0% | |
| GATCAAACCATCTCTATCTA+GGG | - | chr7.1:62129109-62129128 | MS.gene30011:intron | 35.0% | |
| GCATTGTAAACCTTGACATT+GGG | - | chr7.1:62131340-62131359 | MS.gene30011:intron | 35.0% | |
| GCTTCAACAGATTGAGAAAA+TGG | + | chr7.1:62133215-62133234 | None:intergenic | 35.0% | |
| GTTAGAAGAGGGAATAACTA+TGG | + | chr7.1:62130708-62130727 | None:intergenic | 35.0% | |
| TAACTCACCTAACACTTGTT+AGG | + | chr7.1:62132328-62132347 | None:intergenic | 35.0% | |
| TAAGCAGTCTCAATTGTCAA+AGG | + | chr7.1:62130191-62130210 | None:intergenic | 35.0% | |
| TATATCGAACATCCAAGTCA+TGG | + | chr7.1:62129682-62129701 | None:intergenic | 35.0% | |
| TATGAAAGGGAGAAGAACAA+AGG | + | chr7.1:62130835-62130854 | None:intergenic | 35.0% | |
| TCAAAACTCCCTATACGATA+CGG | + | chr7.1:62131190-62131209 | None:intergenic | 35.0% | |
| TCCGAATAAAGAGCTTGTAT+TGG | + | chr7.1:62132569-62132588 | None:intergenic | 35.0% | |
| TGCAATACCAAATAGTGTGT+TGG | + | chr7.1:62132710-62132729 | None:intergenic | 35.0% | |
| TGCATTGTAAACCTTGACAT+TGG | - | chr7.1:62131339-62131358 | MS.gene30011:intron | 35.0% | |
| TGGAAGATAATTTGAGTGGT+GGG | + | chr7.1:62129159-62129178 | None:intergenic | 35.0% | |
| TTAGAGAGTTTCTTGGGAAT+GGG | - | chr7.1:62129338-62129357 | MS.gene30011:intron | 35.0% | |
| TTGGAATATCCAAAGGTCAT+TGG | - | chr7.1:62130080-62130099 | MS.gene30011:intron | 35.0% | |
| TTTAGAGAGTTTCTTGGGAA+TGG | - | chr7.1:62129337-62129356 | MS.gene30011:intron | 35.0% | |
| ! | AGAAAATGGAAATGGACTCT+TGG | + | chr7.1:62133201-62133220 | None:intergenic | 35.0% |
| ! | GAAAATGGAAATGGACTCTT+GGG | + | chr7.1:62133200-62133219 | None:intergenic | 35.0% |
| ! | GAGAGACAAAGTATTACTCA+TGG | + | chr7.1:62130792-62130811 | None:intergenic | 35.0% |
| ! | GATGTGGTTTTTGATACAGT+AGG | - | chr7.1:62132063-62132082 | MS.gene30011:intron | 35.0% |
| ! | GCATTTTCCAACACACTATT+TGG | - | chr7.1:62132700-62132719 | MS.gene30011:intron | 35.0% |
| ! | GGGATGAAGAAATTTAAGGT+TGG | - | chr7.1:62130023-62130042 | MS.gene30011:CDS | 35.0% |
| ! | GTCGACTTACACTTGTAAAT+GGG | + | chr7.1:62129488-62129507 | None:intergenic | 35.0% |
| ! | TTTAGATTAGAGGAGGTACA+AGG | - | chr7.1:62128981-62129000 | MS.gene30011:intron | 35.0% |
| ! | TTTTCATTCTCTCCTCCAAT+GGG | - | chr7.1:62133114-62133133 | MS.gene30011:CDS | 35.0% |
| ! | TTTTTCATTCTCTCCTCCAA+TGG | - | chr7.1:62133113-62133132 | MS.gene30011:CDS | 35.0% |
| !! | GAAAGCTTTGGAATATCCAA+AGG | - | chr7.1:62130073-62130092 | MS.gene30011:intron | 35.0% |
| !! | TCTGATTTGCTTCTGATCTA+TGG | - | chr7.1:62132487-62132506 | MS.gene30011:CDS | 35.0% |
| !! | TGTCGACTTACACTTGTAAA+TGG | + | chr7.1:62129489-62129508 | None:intergenic | 35.0% |
| !! | TGTTGAAGCATTTTCCTATC+TGG | - | chr7.1:62133226-62133245 | MS.gene30011:CDS | 35.0% |
| !!! | CTGCTTGTTTTTTGTGATTG+CGG | - | chr7.1:62131298-62131317 | MS.gene30011:intron | 35.0% |
| AAATCCATACTTGTGCTTGG+TGG | - | chr7.1:62130245-62130264 | MS.gene30011:intron | 40.0% | |
| AACACAAGCAGCAGTCATTA+TGG | + | chr7.1:62131546-62131565 | None:intergenic | 40.0% | |
| AACTATGGCTCAGTGGTAAT+GGG | + | chr7.1:62130693-62130712 | None:intergenic | 40.0% | |
| AAGCAGGAAATGTTCCTTGT+AGG | + | chr7.1:62129431-62129450 | None:intergenic | 40.0% | |
| AAGGTTGGGGATGAAGTTTA+TGG | - | chr7.1:62130038-62130057 | MS.gene30011:intron | 40.0% | |
| AATGTTCCTTGTAGGGATAG+GGG | + | chr7.1:62129423-62129442 | None:intergenic | 40.0% | |
| ACTTGATCATCCTTCACTTG+AGG | + | chr7.1:62128759-62128778 | None:intergenic | 40.0% | |
| AGCAGGAAATGTTCCTTGTA+GGG | + | chr7.1:62129430-62129449 | None:intergenic | 40.0% | |
| AGGCACACTTTATTAGAGTG+TGG | + | chr7.1:62132784-62132803 | None:intergenic | 40.0% | |
| AGGTAGAATACATAGAGAGG+GGG | + | chr7.1:62132917-62132936 | None:intergenic | 40.0% | |
| AGTTTGGATGACCTGTATTC+GGG | + | chr7.1:62132623-62132642 | None:intergenic | 40.0% | |
| ATCTACGTGTGAAATGCGAT+TGG | + | chr7.1:62129841-62129860 | None:intergenic | 40.0% | |
| ATCTCTATCTAGGGATGTCA+AGG | - | chr7.1:62129118-62129137 | MS.gene30011:intron | 40.0% | |
| CAGTTTGGATGACCTGTATT+CGG | + | chr7.1:62132624-62132643 | None:intergenic | 40.0% | |
| CATCACATGTGTCACAATCA+AGG | + | chr7.1:62131475-62131494 | None:intergenic | 40.0% | |
| CTAAACGATGGACCACTTTA+TGG | + | chr7.1:62132180-62132199 | None:intergenic | 40.0% | |
| CTAAATCCATACTTGGAGAG+TGG | - | chr7.1:62133152-62133171 | MS.gene30011:CDS | 40.0% | |
| CTAATGCTGTTCTCATTGGA+TGG | - | chr7.1:62130991-62131010 | MS.gene30011:intron | 40.0% | |
| CTCTCTGTTATGTTGTGATG+TGG | - | chr7.1:62129980-62129999 | MS.gene30011:CDS | 40.0% | |
| GAAATGTTCCTTGTAGGGAT+AGG | + | chr7.1:62129425-62129444 | None:intergenic | 40.0% | |
| GCTTGGACTTACTCAGAATA+TGG | - | chr7.1:62128690-62128709 | MS.gene30011:CDS | 40.0% | |
| GGAAGATAATTTGAGTGGTG+GGG | + | chr7.1:62129158-62129177 | None:intergenic | 40.0% | |
| GGTAAATCCATACTTGTGCT+TGG | - | chr7.1:62130242-62130261 | MS.gene30011:intron | 40.0% | |
| GTCACTCTGTTGATGTTCTA+AGG | - | chr7.1:62128712-62128731 | MS.gene30011:CDS | 40.0% | |
| GTTGAGATTGAGTTAATCGG+TGG | + | chr7.1:62130736-62130755 | None:intergenic | 40.0% | |
| TAACTATGGCTCAGTGGTAA+TGG | + | chr7.1:62130694-62130713 | None:intergenic | 40.0% | |
| TACTTCTCCGATACGCATAT+CGG | + | chr7.1:62130478-62130497 | None:intergenic | 40.0% | |
| TAGAGAGTTTCTTGGGAATG+GGG | - | chr7.1:62129339-62129358 | MS.gene30011:intron | 40.0% | |
| TATCGAGACCGTATCGTATA+GGG | - | chr7.1:62131179-62131198 | MS.gene30011:intron | 40.0% | |
| TATCGTATTCGTATCGTGTC+AGG | - | chr7.1:62131240-62131259 | MS.gene30011:intron | 40.0% | |
| TCATCCTTCACTTGAGGAAT+AGG | + | chr7.1:62128753-62128772 | None:intergenic | 40.0% | |
| TCTCTATCTAGGGATGTCAA+GGG | - | chr7.1:62129119-62129138 | MS.gene30011:intron | 40.0% | |
| TGCTGCAGAAGAGATATCAT+TGG | - | chr7.1:62130121-62130140 | MS.gene30011:intron | 40.0% | |
| TGTGATTCTCCATGATGTCA+AGG | + | chr7.1:62131604-62131623 | None:intergenic | 40.0% | |
| TTACCAATACGTGTCGGATA+CGG | - | chr7.1:62130532-62130551 | MS.gene30011:intron | 40.0% | |
| TTGACATCCCTAGATAGAGA+TGG | + | chr7.1:62129119-62129138 | None:intergenic | 40.0% | |
| TTGGAAAATGCTCAGTCGTT+TGG | + | chr7.1:62132691-62132710 | None:intergenic | 40.0% | |
| TTTATGCTGATGGAGATCCA+CGG | + | chr7.1:62129195-62129214 | None:intergenic | 40.0% | |
| TTTCATTCTCTCCTCCAATG+GGG | - | chr7.1:62133115-62133134 | MS.gene30011:CDS | 40.0% | |
| TTTCCAAATAGCCCGAATAC+AGG | - | chr7.1:62132609-62132628 | MS.gene30011:intron | 40.0% | |
| ! | AACTCCATGCCCTAAAGTTT+TGG | - | chr7.1:62132405-62132424 | MS.gene30011:intron | 40.0% |
| ! | ACTCCATGCCCTAAAGTTTT+GGG | - | chr7.1:62132406-62132425 | MS.gene30011:intron | 40.0% |
| ! | ACTTTGCGATGTACCTTTTG+AGG | - | chr7.1:62132652-62132671 | MS.gene30011:intron | 40.0% |
| ! | GCATTTTCCTATCTGGAAAC+TGG | - | chr7.1:62133233-62133252 | MS.gene30011:CDS | 40.0% |
| ! | TAGCTTGCCAAGCATGTTTA+TGG | - | chr7.1:62131922-62131941 | MS.gene30011:CDS | 40.0% |
| ! | TATGCGTATCGGAGAAGTAT+CGG | - | chr7.1:62130479-62130498 | MS.gene30011:intron | 40.0% |
| !! | AGTTGGAACCCTTGTTATTC+AGG | - | chr7.1:62130277-62130296 | MS.gene30011:intron | 40.0% |
| !! | ATTTCTTAAGTATCGGGCCT+CGG | + | chr7.1:62130413-62130432 | None:intergenic | 40.0% |
| !! | GGAGAATTTTGAAGACCTTC+CGG | - | chr7.1:62132032-62132051 | MS.gene30011:intron | 40.0% |
| !! | TAACCCAAAACTTTAGGGCA+TGG | + | chr7.1:62132412-62132431 | None:intergenic | 40.0% |
| !! | TGAGACTGAGAAGGCATTTA+AGG | - | chr7.1:62133031-62133050 | MS.gene30011:intron | 40.0% |
| !! | TTTCTCTAAGATAGCCCCAT+TGG | + | chr7.1:62133132-62133151 | None:intergenic | 40.0% |
| AATATTGCTGGTGGAAGTCC+TGG | + | chr7.1:62133095-62133114 | None:intergenic | 45.0% | |
| ACATTTGGGAATCTGCAAGC+AGG | + | chr7.1:62129447-62129466 | None:intergenic | 45.0% | |
| ACCCTTGTACTACCCTCAAA+GGG | - | chr7.1:62129390-62129409 | MS.gene30011:intron | 45.0% | |
| ACCTGATTGTTGTCGCGTAA+CGG | - | chr7.1:62131566-62131585 | MS.gene30011:intron | 45.0% | |
| ACCTTGACATTGGGGAGAAT+CGG | - | chr7.1:62131349-62131368 | MS.gene30011:intron | 45.0% | |
| ACCTTTCCACTCTCCAAGTA+TGG | + | chr7.1:62133161-62133180 | None:intergenic | 45.0% | |
| ACTTCTCCGATACGCATATC+GGG | + | chr7.1:62130477-62130496 | None:intergenic | 45.0% | |
| ACTTGAGGAATAGGCACGTT+TGG | + | chr7.1:62128744-62128763 | None:intergenic | 45.0% | |
| ACTTGTAAATGGGATCCCCT+CGG | + | chr7.1:62129478-62129497 | None:intergenic | 45.0% | |
| AGAGAGTTTCTTGGGAATGG+GGG | - | chr7.1:62129340-62129359 | MS.gene30011:intron | 45.0% | |
| AGATCTGCAACTACGAGATC+TGG | + | chr7.1:62131443-62131462 | None:intergenic | 45.0% | |
| AGATCTGGAAGCCAACATTG+GGG | + | chr7.1:62131428-62131447 | None:intergenic | 45.0% | |
| AGCTCTACCAGTTTCCAGAT+AGG | + | chr7.1:62133243-62133262 | None:intergenic | 45.0% | |
| AGGGAATAACTATGGCTCAG+TGG | + | chr7.1:62130700-62130719 | None:intergenic | 45.0% | |
| ATACGCATATCGGGACGTAT+CGG | + | chr7.1:62130468-62130487 | None:intergenic | 45.0% | |
| ATACGTCCCGATATGCGTAT+CGG | - | chr7.1:62130468-62130487 | MS.gene30011:intron | 45.0% | |
| CAAGCTAAGCACGTCCAAAA+AGG | + | chr7.1:62131909-62131928 | None:intergenic | 45.0% | |
| CATACGCAGAGTCCATAAAG+TGG | - | chr7.1:62132165-62132184 | MS.gene30011:intron | 45.0% | |
| CATTGCGATCCTTGACATCA+TGG | - | chr7.1:62131592-62131611 | MS.gene30011:intron | 45.0% | |
| CTCTATCTAGGGATGTCAAG+GGG | - | chr7.1:62129120-62129139 | MS.gene30011:intron | 45.0% | |
| CTCTGATCTAGACTGCTTTG+GGG | - | chr7.1:62130003-62130022 | MS.gene30011:CDS | 45.0% | |
| CTGCTTATGAAGGCCTTGAA+CGG | - | chr7.1:62130204-62130223 | MS.gene30011:intron | 45.0% | |
| CTTTATGGACTCTGCGTATG+CGG | + | chr7.1:62132165-62132184 | None:intergenic | 45.0% | |
| GAAAATGCTCAGTCGTTTGG+TGG | + | chr7.1:62132688-62132707 | None:intergenic | 45.0% | |
| GAGATCTGGAAGCCAACATT+GGG | + | chr7.1:62131429-62131448 | None:intergenic | 45.0% | |
| GAGGCCCGATACTTAAGAAA+TGG | - | chr7.1:62130412-62130431 | MS.gene30011:intron | 45.0% | |
| GCTCTGATCTAGACTGCTTT+GGG | - | chr7.1:62130002-62130021 | MS.gene30011:CDS | 45.0% | |
| GGAAACAAACGTGATCGATG+CGG | - | chr7.1:62131370-62131389 | MS.gene30011:intron | 45.0% | |
| GTATCGAGACCGTATCGTAT+AGG | - | chr7.1:62131178-62131197 | MS.gene30011:intron | 45.0% | |
| GTCGACATTCCAACCACAAT+TGG | - | chr7.1:62129502-62129521 | MS.gene30011:intron | 45.0% | |
| GTGGTGTCCTAACAAGTGTT+AGG | - | chr7.1:62132318-62132337 | MS.gene30011:intron | 45.0% | |
| GTTTGACTGTAGTTTCCTCC+CGG | - | chr7.1:62129632-62129651 | MS.gene30011:intron | 45.0% | |
| TACCCTTGTACTACCCTCAA+AGG | - | chr7.1:62129389-62129408 | MS.gene30011:intron | 45.0% | |
| TAGATGATACCCTTGCCATG+CGG | + | chr7.1:62129369-62129388 | None:intergenic | 45.0% | |
| TCCATACTTGGAGAGTGGAA+AGG | - | chr7.1:62133157-62133176 | MS.gene30011:CDS | 45.0% | |
| TCTATCTAGGGATGTCAAGG+GGG | - | chr7.1:62129121-62129140 | MS.gene30011:intron | 45.0% | |
| TGACCTGTATTCGGGCTATT+TGG | + | chr7.1:62132615-62132634 | None:intergenic | 45.0% | |
| TGCTTATGAAGGCCTTGAAC+GGG | - | chr7.1:62130205-62130224 | MS.gene30011:intron | 45.0% | |
| TGCTTGCAGATTCCCAAATG+TGG | - | chr7.1:62129446-62129465 | MS.gene30011:intron | 45.0% | |
| TTATGCTGATGGAGATCCAC+GGG | + | chr7.1:62129194-62129213 | None:intergenic | 45.0% | |
| TTCTGCTCACACTAATTGCG+CGG | + | chr7.1:62129089-62129108 | None:intergenic | 45.0% | |
| TTTAAACCATTCGAACCGGG+AGG | + | chr7.1:62129650-62129669 | None:intergenic | 45.0% | |
| TTTATGGACTCTGCGTATGC+GGG | + | chr7.1:62132164-62132183 | None:intergenic | 45.0% | |
| ! | ATATCGGGACGTATCGGTAT+CGG | + | chr7.1:62130462-62130481 | None:intergenic | 45.0% |
| ! | TATCGGTATCGGATGCTTGT+CGG | + | chr7.1:62130451-62130470 | None:intergenic | 45.0% |
| ! | TCCCTTTGAGGGTAGTACAA+GGG | + | chr7.1:62129394-62129413 | None:intergenic | 45.0% |
| ! | TTACTCATGGGCAGTGTTGA+TGG | + | chr7.1:62130779-62130798 | None:intergenic | 45.0% |
| !! | ATGCGGGAGTTTTAGTGCAT+CGG | + | chr7.1:62132148-62132167 | None:intergenic | 45.0% |
| !! | CGGTGGTAATGGTTAGAAGA+GGG | + | chr7.1:62130719-62130738 | None:intergenic | 45.0% |
| !! | GTGGTCTTGGTCTTGATAAG+AGG | + | chr7.1:62132521-62132540 | None:intergenic | 45.0% |
| !! | TCCAAAGGTCATTGGTTCAC+TGG | - | chr7.1:62130088-62130107 | MS.gene30011:intron | 45.0% |
| !! | TCGGTGGTAATGGTTAGAAG+AGG | + | chr7.1:62130720-62130739 | None:intergenic | 45.0% |
| !!! | AGAGTTTTAGGAGGTGGAGT+AGG | - | chr7.1:62132942-62132961 | MS.gene30011:intron | 45.0% |
| AAAGGTCGGCGACTATGATC+TGG | + | chr7.1:62131670-62131689 | None:intergenic | 50.0% | |
| AAGGTCGGCGACTATGATCT+GGG | + | chr7.1:62131669-62131688 | None:intergenic | 50.0% | |
| ACCGTTACGCGACAACAATC+AGG | + | chr7.1:62131570-62131589 | None:intergenic | 50.0% | |
| AGATGATACCCTTGCCATGC+GGG | + | chr7.1:62129368-62129387 | None:intergenic | 50.0% | |
| AGCACCACCAAGCACAAGTA+TGG | + | chr7.1:62130252-62130271 | None:intergenic | 50.0% | |
| AGGGGAGAAACTCCCTTTGA+GGG | + | chr7.1:62129405-62129424 | None:intergenic | 50.0% | |
| AGTCACGTAGACCCCAATGT+TGG | - | chr7.1:62131414-62131433 | MS.gene30011:intron | 50.0% | |
| CAGAGAATCCAACCCGTTCA+AGG | + | chr7.1:62130220-62130239 | None:intergenic | 50.0% | |
| CCACATCAAACTTCTCCGGA+AGG | + | chr7.1:62132050-62132069 | None:intergenic | 50.0% | |
| CCTTCCGGAGAAGTTTGATG+TGG | - | chr7.1:62132047-62132066 | MS.gene30011:intron | 50.0% | |
| CGAGATCTGGAAGCCAACAT+TGG | + | chr7.1:62131430-62131449 | None:intergenic | 50.0% | |
| CGTGCCTATTCCTCAAGTGA+AGG | - | chr7.1:62128746-62128765 | MS.gene30011:CDS | 50.0% | |
| CTCACTTGTGTGCTTGCTCT+TGG | - | chr7.1:62132447-62132466 | MS.gene30011:intron | 50.0% | |
| CTGGAAACTGGTAGAGCTAC+TGG | - | chr7.1:62133245-62133264 | MS.gene30011:CDS | 50.0% | |
| GAGCAAGCACACAAGTGAGT+TGG | + | chr7.1:62132446-62132465 | None:intergenic | 50.0% | |
| GCATGTTTATGGCGCTTCCA+AGG | - | chr7.1:62131933-62131952 | MS.gene30011:CDS | 50.0% | |
| GCCAGTGAACCAATGACCTT+TGG | + | chr7.1:62130092-62130111 | None:intergenic | 50.0% | |
| GCTAGATGTAGCTGCTACCT+TGG | + | chr7.1:62131953-62131972 | None:intergenic | 50.0% | |
| GGACTCTTGGGATCAAGTAC+TGG | + | chr7.1:62133188-62133207 | None:intergenic | 50.0% | |
| GTTATAACGTAGCAGCTCCG+AGG | - | chr7.1:62130393-62130412 | MS.gene30011:intron | 50.0% | |
| GTTCTGACAGTTGCACTACC+AGG | - | chr7.1:62133074-62133093 | MS.gene30011:intron | 50.0% | |
| GTTTCTCCCCTATCCCTACA+AGG | - | chr7.1:62129414-62129433 | MS.gene30011:intron | 50.0% | |
| TAGCCGTATCCGACACGTAT+TGG | + | chr7.1:62130538-62130557 | None:intergenic | 50.0% | |
| TAGGGGAGAAACTCCCTTTG+AGG | + | chr7.1:62129406-62129425 | None:intergenic | 50.0% | |
| TATGAAGGCCTTGAACGGGT+TGG | - | chr7.1:62130209-62130228 | MS.gene30011:intron | 50.0% | |
| TCCGATTCTCCCCAATGTCA+AGG | + | chr7.1:62131353-62131372 | None:intergenic | 50.0% | |
| TGATCTGGGCCGTGACATTA+AGG | + | chr7.1:62131655-62131674 | None:intergenic | 50.0% | |
| ! | CTCCCTTTGAGGGTAGTACA+AGG | + | chr7.1:62129395-62129414 | None:intergenic | 50.0% |
| ! | GGCTCTGATCTAGACTGCTT+TGG | - | chr7.1:62130001-62130020 | MS.gene30011:CDS | 50.0% |
| ! | TAGTTTCCTCCCGGTTCGAA+TGG | - | chr7.1:62129641-62129660 | MS.gene30011:intron | 50.0% |
| !! | ATACTTGTGCTTGGTGGTGC+TGG | - | chr7.1:62130251-62130270 | MS.gene30011:intron | 50.0% |
| !! | CTCTAAGATAGCCCCATTGG+AGG | + | chr7.1:62133129-62133148 | None:intergenic | 50.0% |
| !! | GCAAAGTGTTGCACGCAGTT+TGG | + | chr7.1:62132639-62132658 | None:intergenic | 50.0% |
| !! | GGAAGCGCCATAAACATGCT+TGG | + | chr7.1:62131932-62131951 | None:intergenic | 50.0% |
| !! | TGCGGGAGTTTTAGTGCATC+GGG | + | chr7.1:62132147-62132166 | None:intergenic | 50.0% |
| AAATGGGATCCCCTCGGAGA+CGG | + | chr7.1:62129472-62129491 | None:intergenic | 55.0% | |
| ATCTAGGGATGTCAAGGGGG+CGG | - | chr7.1:62129124-62129143 | MS.gene30011:intron | 55.0% | |
| GATCGATGCGGCTTCAACCA+CGG | - | chr7.1:62131382-62131401 | MS.gene30011:intron | 55.0% | |
| GATGATACCCTTGCCATGCG+GGG | + | chr7.1:62129367-62129386 | None:intergenic | 55.0% | |
| TTGCGGCTGTTGTTCAGTCG+TGG | - | chr7.1:62131315-62131334 | MS.gene30011:intron | 55.0% | |
| !! | GAACGGGTTGGATTCTCTGC+TGG | - | chr7.1:62130221-62130240 | MS.gene30011:intron | 55.0% |
| AGGGGGAGCTGAGACTGAGA+AGG | - | chr7.1:62133022-62133041 | MS.gene30011:intron | 60.0% | |
| CAAATGTGGCCGTCTCCGAG+GGG | - | chr7.1:62129460-62129479 | MS.gene30011:intron | 60.0% | |
| CCAAATGTGGCCGTCTCCGA+GGG | - | chr7.1:62129459-62129478 | MS.gene30011:intron | 60.0% | |
| CCTCGGAGACGGCCACATTT+GGG | + | chr7.1:62129461-62129480 | None:intergenic | 60.0% | |
| GGGTCTACGTGACTGCAACG+TGG | + | chr7.1:62131408-62131427 | None:intergenic | 60.0% | |
| TCCACGGGAGCCAGCAATGA+TGG | + | chr7.1:62129179-62129198 | None:intergenic | 60.0% | |
| !! | CTTGGTGGTGCTGGTGGAGT+TGG | - | chr7.1:62130260-62130279 | MS.gene30011:intron | 60.0% |
| !! | CTTGTGCTTGGTGGTGCTGG+TGG | - | chr7.1:62130254-62130273 | MS.gene30011:intron | 60.0% |
| !! | TCCATCATTGCTGGCTCCCG+TGG | - | chr7.1:62129175-62129194 | MS.gene30011:intron | 60.0% |
| ACGTGACTGCAACGTGGCCG+TGG | + | chr7.1:62131402-62131421 | None:intergenic | 65.0% | |
| CCCAAATGTGGCCGTCTCCG+AGG | - | chr7.1:62129458-62129477 | MS.gene30011:intron | 65.0% | |
| CCCTCGGAGACGGCCACATT+TGG | + | chr7.1:62129462-62129481 | None:intergenic | 65.0% | |
| TAGGGATGTCAAGGGGGCGG+AGG | - | chr7.1:62129127-62129146 | MS.gene30011:intron | 65.0% | |
| ATGGGGGTCCCCGCATGGCA+AGG | - | chr7.1:62129356-62129375 | MS.gene30011:intron | 70.0% | |
| GGATGTCAAGGGGGCGGAGG+AGG | - | chr7.1:62129130-62129149 | MS.gene30011:intron | 70.0% | |
| TGGGAATGGGGGTCCCCGCA+TGG | - | chr7.1:62129351-62129370 | MS.gene30011:intron | 70.0% | |
| TGGGGGTCCCCGCATGGCAA+GGG | - | chr7.1:62129357-62129376 | MS.gene30011:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 62128684 | 62133295 | 62128684 | ID=MS.gene30011 |
| chr7.1 | mRNA | 62128684 | 62133295 | 62128684 | ID=MS.gene30011.t1;Parent=MS.gene30011 |
| chr7.1 | exon | 62133113 | 62133295 | 62133113 | ID=MS.gene30011.t1.exon1;Parent=MS.gene30011.t1 |
| chr7.1 | CDS | 62133113 | 62133295 | 62133113 | ID=cds.MS.gene30011.t1;Parent=MS.gene30011.t1 |
| chr7.1 | exon | 62132456 | 62132524 | 62132456 | ID=MS.gene30011.t1.exon2;Parent=MS.gene30011.t1 |
| chr7.1 | CDS | 62132456 | 62132524 | 62132456 | ID=cds.MS.gene30011.t1;Parent=MS.gene30011.t1 |
| chr7.1 | exon | 62131681 | 62131965 | 62131681 | ID=MS.gene30011.t1.exon3;Parent=MS.gene30011.t1 |
| chr7.1 | CDS | 62131681 | 62131965 | 62131681 | ID=cds.MS.gene30011.t1;Parent=MS.gene30011.t1 |
| chr7.1 | exon | 62129895 | 62130054 | 62129895 | ID=MS.gene30011.t1.exon4;Parent=MS.gene30011.t1 |
| chr7.1 | CDS | 62129895 | 62130054 | 62129895 | ID=cds.MS.gene30011.t1;Parent=MS.gene30011.t1 |
| chr7.1 | exon | 62128684 | 62128955 | 62128684 | ID=MS.gene30011.t1.exon5;Parent=MS.gene30011.t1 |
| chr7.1 | CDS | 62128684 | 62128955 | 62128684 | ID=cds.MS.gene30011.t1;Parent=MS.gene30011.t1 |
| Gene Sequence |
| Protein sequence |
