AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30898


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30898.t1 MTR_1g066940 97.872 1551 31 2 1 1551 1 1549 0.0 3131
MS.gene30898.t1 MTR_1g066940 97.908 1530 30 2 1 1530 1 1528 0.0 3087
MS.gene30898.t1 MTR_1g066940 97.870 1502 30 2 1 1502 1 1500 0.0 3027
MS.gene30898.t1 MTR_4g073370 48.696 690 301 9 912 1551 1195 1881 0.0 609
MS.gene30898.t1 MTR_4g073370 37.004 781 420 8 97 810 175 950 2.40e-128 442
MS.gene30898.t1 MTR_7g061200 48.564 383 124 6 919 1297 143 456 1.05e-101 334
MS.gene30898.t1 MTR_7g061200 48.276 116 58 1 713 826 19 134 1.16e-26 115
MS.gene30898.t1 MTR_7g100660 51.779 253 105 7 92 337 25 267 9.92e-66 224
MS.gene30898.t1 MTR_1g066920 58.394 137 15 3 1007 1142 1 96 1.64e-38 140
MS.gene30898.t1 MTR_2g033040 28.571 462 259 15 1102 1551 622 1024 4.58e-35 146
MS.gene30898.t1 MTR_3g099777 28.750 400 238 10 1155 1548 3322 3680 1.04e-34 146
MS.gene30898.t1 MTR_5g066710 28.607 402 236 11 1155 1548 3294 3652 1.95e-32 139
MS.gene30898.t1 MTR_4g094708 28.678 401 231 12 1158 1548 3400 3755 6.27e-32 137
MS.gene30898.t1 MTR_4g094705 28.250 400 234 12 1158 1548 3379 3734 1.05e-30 133
MS.gene30898.t1 MTR_7g103210 26.596 470 263 13 1105 1551 738 1148 1.07e-26 119
MS.gene30898.t1 MTR_2g025810 23.691 363 225 8 1181 1537 484 800 7.93e-21 100
MS.gene30898.t1 MTR_4g133120 25.132 378 223 8 1181 1547 548 876 5.10e-19 94.4
MS.gene30898.t1 MTR_2g025830 25.886 367 212 13 1181 1537 489 805 2.18e-18 92.0
MS.gene30898.t1 MTR_2g025790 24.523 367 209 13 1185 1537 499 811 8.03e-18 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30898.t1 AT5G02880 54.528 1568 630 19 1 1551 1 1502 0.0 1557
MS.gene30898.t1 AT5G02880 53.975 1547 629 19 1 1530 1 1481 0.0 1516
MS.gene30898.t1 AT4G38600 48.547 688 293 9 918 1551 1208 1888 0.0 605
MS.gene30898.t1 AT4G38600 36.829 782 414 11 100 810 192 964 3.86e-133 456
MS.gene30898.t1 AT4G38600 48.547 688 293 9 918 1551 1208 1888 0.0 605
MS.gene30898.t1 AT4G38600 36.829 782 414 11 100 810 192 964 3.86e-133 456
MS.gene30898.t1 AT4G38600 48.110 688 293 10 918 1551 1117 1794 0.0 594
MS.gene30898.t1 AT4G38600 36.829 782 414 11 100 810 119 891 4.43e-133 454
MS.gene30898.t1 AT3G17205 28.139 462 261 13 1102 1551 627 1029 5.49e-36 149
MS.gene30898.t1 AT3G17205 28.139 462 261 13 1102 1551 627 1029 5.49e-36 149
MS.gene30898.t1 AT3G17205 28.139 462 261 13 1102 1551 613 1015 5.88e-36 149
MS.gene30898.t1 AT1G55860 27.545 501 286 17 1058 1548 3245 3678 9.90e-33 140
MS.gene30898.t1 AT1G70320 28.211 436 248 13 1130 1548 3268 3655 1.84e-32 139
MS.gene30898.t1 AT3G53090 30.864 324 178 7 1241 1551 852 1142 1.42e-29 129
MS.gene30898.t1 AT3G53090 30.864 324 178 7 1241 1551 852 1142 1.42e-29 129
MS.gene30898.t1 AT4G12570 24.185 368 219 12 1181 1537 540 858 2.69e-13 75.9

Find 318 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTACATTATAAATTAAT+TGG 0.108360 1.2:+50350956 None:intergenic
AGCCTGCAAGTTTGTCTTTA+TGG 0.127172 1.2:+50346960 None:intergenic
GCGTTGGCAGTATGCCTTTC+TGG 0.146304 1.2:-50347347 MS.gene30898:CDS
GGCAGTTCATCTACCATTTC+TGG 0.155808 1.2:+50352266 None:intergenic
ACAGGAATCCATTCTCTTTA+TGG 0.164689 1.2:-50346931 MS.gene30898:CDS
TTTATCACTTGGCCAATATA+TGG 0.187779 1.2:-50348878 MS.gene30898:CDS
GCCTTCTATAAACTTATTCT+TGG 0.198719 1.2:-50346763 MS.gene30898:CDS
CCTGATACTGTTCTTGCTTC+AGG 0.204370 1.2:-50346438 MS.gene30898:CDS
CAAATTATGGACAAGCTTAT+TGG 0.211903 1.2:-50348964 MS.gene30898:CDS
TAGAAGAAGATTGCATAATA+TGG 0.213469 1.2:+50351238 None:intergenic
CTTACAGGCAGGGGCAATTA+TGG 0.231409 1.2:-50351524 MS.gene30898:CDS
TTTCTGGTGTAATCAGTTAT+TGG 0.236134 1.2:-50347331 MS.gene30898:CDS
ATCATCTTCTTCAGGAATTC+AGG 0.237048 1.2:-50348096 MS.gene30898:intron
ATTGAGTGCAAAGAAGAAAA+AGG 0.254801 1.2:+50348529 None:intergenic
TTTGTTTGTTTGACCAAATC+TGG 0.262499 1.2:-50349609 MS.gene30898:CDS
TTTGCACAGGTGTTTAATTC+TGG 0.267152 1.2:-50349678 MS.gene30898:intron
ACAACCACTTGCTTGCTTAC+AGG 0.269423 1.2:-50351539 MS.gene30898:CDS
TGTACGTTGCTCAGAATAAT+AGG 0.270713 1.2:+50348685 None:intergenic
AATTGAAGCGGTGGACTTTC+AGG 0.276996 1.2:+50348427 None:intergenic
CCCGTTTCACCTTGAAATAT+TGG 0.277617 1.2:+50349560 None:intergenic
TAGCAACAACTTGACCTAAA+AGG 0.279896 1.2:+50346830 None:intergenic
TCCAATGCTAGTTGATTATT+CGG 0.280130 1.2:+50349846 None:intergenic
TTTCTTGAAGTTATTTATAA+AGG 0.284298 1.2:-50349370 MS.gene30898:CDS
AGATAATGTTGTTATCTATA+AGG 0.287139 1.2:-50351809 MS.gene30898:CDS
ACACATCTCTTAAGTGTAAA+TGG 0.294828 1.2:-50350994 MS.gene30898:CDS
TAGTGAACTTGTTTCTGATT+TGG 0.305509 1.2:-50347601 MS.gene30898:CDS
ACTCTATATCAGGCAATTCT+TGG 0.313246 1.2:-50347816 MS.gene30898:CDS
ACCAGAAAGATCATCAAAAT+TGG 0.318013 1.2:-50349313 MS.gene30898:CDS
GCCTGATATAGAGTCAATTT+AGG 0.318810 1.2:+50347825 None:intergenic
TAGGGTACTGGATCAAATTA+TGG 0.322008 1.2:-50348977 MS.gene30898:CDS
TCCAAGAATAAGTTTATAGA+AGG 0.323416 1.2:+50346762 None:intergenic
CCTTAACAAAACGTACTTTC+AGG 0.327563 1.2:+50348605 None:intergenic
AGTTTCAAGCACTAGTTAAC+AGG 0.335099 1.2:-50346572 MS.gene30898:CDS
CTGATACTGTTCTTGCTTCA+GGG 0.335158 1.2:-50346437 MS.gene30898:CDS
TCGTTTGCTACCGTTCCTAA+TGG 0.341445 1.2:-50348649 MS.gene30898:CDS
CTCCACAAGCATGCCAGATT+TGG 0.343831 1.2:+50349596 None:intergenic
TTTGCTTGACAGGGTTTGAT+AGG 0.343922 1.2:-50350820 MS.gene30898:intron
TGCTCACGAACTCATTTAGT+TGG 0.352397 1.2:+50347421 None:intergenic
TCCTAAATTGACTCTATATC+AGG 0.352943 1.2:-50347826 MS.gene30898:CDS
CACTGGTCTTGGACCAACTT+TGG 0.353799 1.2:-50347058 MS.gene30898:CDS
AGGTTTCACAGCTGCTCTAT+AGG 0.360588 1.2:+50347728 None:intergenic
CGGGATCAGTCGTAGCCTTC+AGG 0.360602 1.2:-50350777 MS.gene30898:CDS
CCAAGCTTCTGCAGGAGATC+TGG 0.360951 1.2:+50349798 None:intergenic
TTCTCAGAATCATATAATTC+CGG 0.363354 1.2:+50349102 None:intergenic
AGAAAGCCCCACACCTTTCA+TGG 0.366588 1.2:-50351270 MS.gene30898:CDS
CACCCCTTTCTATATTAATC+AGG 0.366699 1.2:-50348744 MS.gene30898:CDS
ATAGATAACAACATTATCTC+TGG 0.375506 1.2:+50351813 None:intergenic
AGTTTACCGCGACCGGATCT+TGG 0.377364 1.2:-50347157 MS.gene30898:CDS
GCACAGGACCTTGTATTTGA+TGG 0.379331 1.2:+50348403 None:intergenic
GCTGGGGAATCATCTTCTTC+AGG 0.379627 1.2:-50348104 MS.gene30898:CDS
TACTTCAAACTGGCAGCATT+TGG 0.381453 1.2:-50347267 MS.gene30898:CDS
TTAAGAACGCCAATATTTCA+AGG 0.382881 1.2:-50349569 MS.gene30898:intron
TTATCACTTGGCCAATATAT+GGG 0.385628 1.2:-50348877 MS.gene30898:CDS
TCTCTGGCTCTTCCTCTGAA+TGG 0.387400 1.2:+50352108 None:intergenic
TACCATAAAGACAAACTTGC+AGG 0.388688 1.2:-50346962 MS.gene30898:CDS
GATAATGTTGTTATCTATAA+GGG 0.388751 1.2:-50351808 MS.gene30898:CDS
TATAGAAGGCTTTAGAAAAG+TGG 0.391315 1.2:+50346776 None:intergenic
GAAGAAGTGGGCACTGGTCT+TGG 0.391848 1.2:-50347069 MS.gene30898:CDS
CCTGAAGCAAGAACAGTATC+AGG 0.394520 1.2:+50346438 None:intergenic
GCTTACATTATAAATTAATT+GGG 0.396042 1.2:+50350957 None:intergenic
CTGGTTAAAGCCGGATTTGA+AGG 0.396606 1.2:+50346225 None:intergenic
ATGCAATCTTCTTCTATATG+AGG 0.398799 1.2:-50351231 MS.gene30898:CDS
GCAACAGATGAGGGACTCTA+TGG 0.399457 1.2:-50347376 MS.gene30898:CDS
TTGTTGGTGGACACTGTAAT+CGG 0.400693 1.2:-50350669 MS.gene30898:CDS
AGGAAATTCTGAGTTGGAAC+AGG 0.403866 1.2:-50346523 MS.gene30898:CDS
GGTCTAGGATGTGATGTCTT+TGG 0.403891 1.2:+50348149 None:intergenic
AAGACAAAGATCCTCAATTC+TGG 0.405489 1.2:+50346482 None:intergenic
TCTGTTTCTTCTTAAAAGCT+TGG 0.412107 1.2:-50347553 MS.gene30898:CDS
CCATCAGCTGAATCCTTCTC+TGG 0.415608 1.2:+50352092 None:intergenic
CAGATCTCCTGCAGAAGCTT+GGG 0.415893 1.2:-50349797 MS.gene30898:CDS
ACTCAATTGAAAGATATCTA+TGG 0.416876 1.2:-50348513 MS.gene30898:CDS
TTTGCGGAGAGAACGATTCT+TGG 0.417616 1.2:-50344371 MS.gene30898:CDS
TTACCTTGAAGGACAACCTC+TGG 0.418065 1.2:-50347850 MS.gene30898:CDS
CCTGCACGTTCTGAGATTGC+TGG 0.419146 1.2:+50348370 None:intergenic
GCTGAGCGCACTGACTTCAT+TGG 0.424825 1.2:-50348716 MS.gene30898:CDS
TGAAGGTAAAGTTGATAATC+TGG 0.429075 1.2:-50347472 MS.gene30898:CDS
GAATTATATGATTCTGAGAA+AGG 0.434177 1.2:-50349099 MS.gene30898:CDS
AGATCCTTGACCCTCTGTTA+TGG 0.436200 1.2:+50343632 None:intergenic
CTTCTTAATTATTTATCACT+TGG 0.436600 1.2:-50348889 MS.gene30898:CDS
ACGAATACGGAGGTAGCTTA+AGG 0.440357 1.2:+50343786 None:intergenic
ATCATGTGATTCAGATGAAA+TGG 0.441384 1.2:-50352069 MS.gene30898:CDS
AAGGTATAAAATTCCAAAGT+TGG 0.442534 1.2:+50347045 None:intergenic
CTTTAGAGATTCCAGAATTG+AGG 0.442539 1.2:-50346493 MS.gene30898:CDS
TTCACATTGACTGCTTGATC+GGG 0.443383 1.2:+50348128 None:intergenic
CTGTTTCTGCTTTATGTCAA+AGG 0.448199 1.2:-50351725 MS.gene30898:CDS
ATGGACTCTTTCCTCGTCCA+TGG 0.448715 1.2:-50346912 MS.gene30898:CDS
AACTTGCAGGCTGAGGAAAC+AGG 0.448741 1.2:-50346949 MS.gene30898:CDS
AGGTCAAAAGCGTCCAGAAA+TGG 0.454675 1.2:-50352279 MS.gene30898:CDS
GAGTTACAGAAGTCTGGTTC+GGG 0.454806 1.2:-50347012 MS.gene30898:CDS
CCAGATCTCCTGCAGAAGCT+TGG 0.455365 1.2:-50349798 MS.gene30898:CDS
AACAGTAAGTGACAGGCGAC+TGG 0.455428 1.2:-50347211 MS.gene30898:CDS
TTCTGATGATGTAGGAGATT+GGG 0.456429 1.2:+50349197 None:intergenic
ATTCACATTGACTGCTTGAT+CGG 0.456516 1.2:+50348127 None:intergenic
GAATGAACTTCTCCCTGGCC+TGG 0.457614 1.2:-50349877 MS.gene30898:CDS
TAAGGAACGGCACATCCATT+AGG 0.457643 1.2:+50348634 None:intergenic
TTGAGAGATGCCAATCCTCC+TGG 0.458208 1.2:+50343990 None:intergenic
TGCATGAAGAGAAGATCAAT+AGG 0.458937 1.2:-50348996 MS.gene30898:CDS
TTGCGGAGAGAACGATTCTT+GGG 0.458952 1.2:-50344370 MS.gene30898:CDS
GAACTTGAGCGTATACTTTG+CGG 0.459853 1.2:-50344387 MS.gene30898:CDS
GGAGTTACAGAAGTCTGGTT+CGG 0.459957 1.2:-50347013 MS.gene30898:CDS
AGAAGAAGATTGCATAATAT+GGG 0.461055 1.2:+50351239 None:intergenic
TTACTTGTCAAACTTTCATC+GGG 0.461212 1.2:-50350796 MS.gene30898:CDS
ATCTTGCTTCAAAGCTGAAT+AGG 0.462435 1.2:+50347295 None:intergenic
CAGTAAGTTGACAGAGAAGC+TGG 0.464250 1.2:-50347400 MS.gene30898:CDS
GAAAATCTGAAGATGTTCAA+TGG 0.464292 1.2:+50344419 None:intergenic
ATTACTTGTCAAACTTTCAT+CGG 0.465159 1.2:-50350797 MS.gene30898:CDS
TAAGCATGGATTGATTCAAC+AGG 0.465195 1.2:-50351019 MS.gene30898:CDS
AGTGGACAAACTGAACCTTC+TGG 0.465257 1.2:-50351960 MS.gene30898:CDS
GAGGTGTGCCAGTCACGAAC+TGG 0.465303 1.2:+50344021 None:intergenic
CTTCTGATGATGTAGGAGAT+TGG 0.465616 1.2:+50349196 None:intergenic
TTTCTTCTCAACAAGCATAC+AGG 0.466716 1.2:-50351482 MS.gene30898:intron
GATCCAGAGGTTGTCCTTCA+AGG 0.468009 1.2:+50347847 None:intergenic
TTGACTGCTTGATCGGGTCT+AGG 0.468019 1.2:+50348134 None:intergenic
TCCGAAGGCATTATGTCCTC+AGG 0.468713 1.2:+50347708 None:intergenic
GAAAGAGTCCATAAAGAGAA+TGG 0.468797 1.2:+50346923 None:intergenic
TGTGTTTCCCATGTTGATCC+AGG 0.470648 1.2:-50349769 MS.gene30898:intron
CCACTTGCTTGCTTACAGGC+AGG 0.472378 1.2:-50351535 MS.gene30898:CDS
ACCTAGTTCTTCTACTGCCT+CGG 0.474148 1.2:-50352207 MS.gene30898:CDS
CTATAAACTTATTCTTGGAA+AGG 0.474267 1.2:-50346758 MS.gene30898:intron
TATCCAGTGTCTTCAAGCAT+TGG 0.474555 1.2:-50351578 MS.gene30898:intron
CAAGCAGTCAATGTGAATGC+TGG 0.474799 1.2:-50348122 MS.gene30898:CDS
AAAATCTGAAGATGTTCAAT+GGG 0.474853 1.2:+50344420 None:intergenic
CAGAGACTATCGAGTGATCA+TGG 0.475475 1.2:-50352011 MS.gene30898:CDS
TGTCAGGAGTTACAGAAGTC+TGG 0.479773 1.2:-50347018 MS.gene30898:CDS
CGATGTAAGTTCAACACAAT+CGG 0.479828 1.2:-50352177 MS.gene30898:CDS
CTTGAAGTTATTTATAAAGG+AGG 0.480655 1.2:-50349367 MS.gene30898:CDS
GTCTCTGTCTATGATATTCG+TGG 0.483373 1.2:+50352027 None:intergenic
CAGGTGGAAGCCTTCAAATC+CGG 0.484304 1.2:-50346235 MS.gene30898:CDS
CAAGAGAATGAAGTCATGAT+AGG 0.485110 1.2:+50343604 None:intergenic
TCGGCTTCCTCCAGGAGGAT+TGG 0.487594 1.2:-50344000 MS.gene30898:CDS
AGAAACAGAATATCATAAGT+TGG 0.490252 1.2:+50347567 None:intergenic
GTTGATGCAACTGTCAAGTC+TGG 0.490324 1.2:-50346268 MS.gene30898:CDS
GATTCCTGATTAATATAGAA+AGG 0.490377 1.2:+50348740 None:intergenic
ACCTGAGGACATAATGCCTT+CGG 0.490897 1.2:-50347709 MS.gene30898:CDS
TAGGTAGGTCTGTGTCTGCT+TGG 0.494170 1.2:+50343831 None:intergenic
TCCGAATAATCAACTAGCAT+TGG 0.494261 1.2:-50349847 MS.gene30898:CDS
TGGTGTTAAGAGTGCCTCAA+TGG 0.495645 1.2:+50349332 None:intergenic
AAAAGTGTAACACAGGCACT+TGG 0.496525 1.2:+50349227 None:intergenic
ATTCCTGATTAATATAGAAA+GGG 0.497877 1.2:+50348741 None:intergenic
AAGATGCAAGTACTTCAAAC+TGG 0.497996 1.2:-50347277 MS.gene30898:CDS
GGCACACCTCGGCTTCCTCC+AGG 0.499406 1.2:-50344008 MS.gene30898:CDS
TTTCTTCTTAAAAGCTTGGA+AGG 0.499941 1.2:-50347549 MS.gene30898:CDS
AGAAGTATCCATGTCATCAT+GGG 0.500695 1.2:+50352145 None:intergenic
GACTCTATGGCAGTCTGCGT+TGG 0.502622 1.2:-50347363 MS.gene30898:CDS
TTGAAGTTATTTATAAAGGA+GGG 0.503425 1.2:-50349366 MS.gene30898:CDS
ACAGCCTCCATGAAAGGTGT+GGG 0.503968 1.2:+50351263 None:intergenic
AAGCAGTCAATGTGAATGCT+GGG 0.505662 1.2:-50348121 MS.gene30898:CDS
AACTGAACCTTCTGGTCAGT+TGG 0.508583 1.2:-50351952 MS.gene30898:CDS
AAGAAGTATCCATGTCATCA+TGG 0.508828 1.2:+50352144 None:intergenic
GTATCAACGTCTCAGCTTGT+TGG 0.509233 1.2:-50350685 MS.gene30898:CDS
GCATTCCTCCAGTTCGTGAC+TGG 0.509587 1.2:-50344029 MS.gene30898:CDS
CCAGAGAAGGATTCAGCTGA+TGG 0.509910 1.2:-50352092 MS.gene30898:CDS
TGCAGTACCCTACCAAGCTC+AGG 0.510678 1.2:+50346597 None:intergenic
AGAAGTCTGGTTCGGGCATG+TGG 0.511577 1.2:-50347005 MS.gene30898:CDS
TTCGCAGAGTTCAGTGAGTA+CGG 0.511720 1.2:+50351929 None:intergenic
TGTATCCTTACATTAACAAT+GGG 0.513014 1.2:+50344179 None:intergenic
CACTTGATCCTGAGCTTGGT+AGG 0.513265 1.2:-50346605 MS.gene30898:CDS
AGAGAAGATCAATAGGGTAC+TGG 0.515205 1.2:-50348989 MS.gene30898:CDS
GAGGATGAGAAATTATCATC+TGG 0.518325 1.2:-50348466 MS.gene30898:CDS
GGAATGCTCGTCGTTGGCCA+TGG 0.520361 1.2:+50344045 None:intergenic
GACCAAATCTGGCATGCTTG+TGG 0.520594 1.2:-50349598 MS.gene30898:CDS
CATCCATCCCAAGCTTCTGC+AGG 0.522550 1.2:+50349790 None:intergenic
CTTCAAATCCGGCTTTAACC+AGG 0.522768 1.2:-50346224 MS.gene30898:intron
GCATATTAAAACAAAATACT+TGG 0.524480 1.2:-50349127 MS.gene30898:CDS
TTCAAGAACCACTTTATGAC+TGG 0.525002 1.2:+50347104 None:intergenic
TCGGATGAACTTTGTAAGCA+TGG 0.525137 1.2:-50351033 MS.gene30898:CDS
TGCTGGAACTTCATCTGCAC+AGG 0.526726 1.2:+50348387 None:intergenic
GATCTGTATCCTCGATCAGC+TGG 0.526965 1.2:-50351768 MS.gene30898:CDS
TATCACTTGGCCAATATATG+GGG 0.528827 1.2:-50348876 MS.gene30898:CDS
GGGGAAAACAAGGGGATGCA+TGG 0.529152 1.2:-50348856 MS.gene30898:CDS
ATAGTAAAACAAAATGATAG+TGG 0.529484 1.2:-50347789 MS.gene30898:CDS
TTGCTGAATGAACTTCTCCC+TGG 0.529652 1.2:-50349882 MS.gene30898:CDS
CTGTGAAGGAAATTCTGAGT+TGG 0.530317 1.2:-50346529 MS.gene30898:CDS
AGAAGCTGGAGCAACAGATG+AGG 0.530960 1.2:-50347386 MS.gene30898:CDS
TTTGCAAGCTTTACAAGTAG+TGG 0.532154 1.2:+50351849 None:intergenic
TAGATAACAACATTATCTCT+GGG 0.534042 1.2:+50351814 None:intergenic
CTGCACGCTCTCTTATCAGC+AGG 0.534803 1.2:+50352245 None:intergenic
AGTGACAGGCGACTGGGCCA+TGG 0.535099 1.2:-50347204 MS.gene30898:CDS
CACTTGCTTGCTTACAGGCA+GGG 0.535547 1.2:-50351534 MS.gene30898:CDS
AAAGTGTAACACAGGCACTT+GGG 0.538825 1.2:+50349228 None:intergenic
ATCTGGATGATTAGCTAGGA+AGG 0.539146 1.2:+50349815 None:intergenic
TCATAAAGTGGTTCTTGAAG+TGG 0.540987 1.2:-50347100 MS.gene30898:CDS
ATCTTCTTCTATATGAGGAT+CGG 0.543387 1.2:-50351226 MS.gene30898:CDS
GTATCAAGACGTAGCCGACC+AGG 0.543633 1.2:-50351688 MS.gene30898:intron
TTCTCATTCCTCAGAAATGT+CGG 0.543799 1.2:-50351052 MS.gene30898:CDS
ACTACATGCCAGTCATAAAG+TGG 0.544099 1.2:-50347112 MS.gene30898:CDS
GCTTTGTTGCTACAAGATGC+AGG 0.544451 1.2:+50347891 None:intergenic
ACAAAACGTACTTTCAGGCA+AGG 0.545702 1.2:+50348610 None:intergenic
TGTTGGTGGACACTGTAATC+GGG 0.545964 1.2:-50350668 MS.gene30898:intron
AAAGACAAACTTGCAGGCTG+AGG 0.546000 1.2:-50346956 MS.gene30898:CDS
GATTATCTCAGCTATCTGTA+AGG 0.546532 1.2:+50349413 None:intergenic
TCTTCTATATGAGGATCGGC+AGG 0.547401 1.2:-50351222 MS.gene30898:intron
CGTACTTTCAGGCAAGGGTA+AGG 0.547506 1.2:+50348616 None:intergenic
TTGTCAACACAAGATACATC+TGG 0.550545 1.2:-50346889 MS.gene30898:CDS
TAACAAGTCTGAAGTCATGC+TGG 0.550885 1.2:+50351875 None:intergenic
GAAGCTGGAGCAACAGATGA+GGG 0.553462 1.2:-50347385 MS.gene30898:CDS
CACAGCCTCCATGAAAGGTG+TGG 0.554075 1.2:+50351262 None:intergenic
TTATTGTGAGGTGGCATTCG+TGG 0.554265 1.2:+50347240 None:intergenic
GGAGATCTGGATGATTAGCT+AGG 0.556095 1.2:+50349811 None:intergenic
CTAAAGCACTTCAAGACGGA+AGG 0.557300 1.2:-50346810 MS.gene30898:CDS
GAATAGACATCCATGGCAAA+CGG 0.558982 1.2:+50349644 None:intergenic
TATGGACAAGCTTATTGGCA+AGG 0.559664 1.2:-50348959 MS.gene30898:CDS
GAAAGGTGTGGGGCTTTCTG+AGG 0.560626 1.2:+50351274 None:intergenic
GTGCAGCGGACTCCAAGATC+CGG 0.561984 1.2:+50347145 None:intergenic
ACTTGCTTGCTTACAGGCAG+GGG 0.563872 1.2:-50351533 MS.gene30898:CDS
GCAGAATCAGACTCAAAACT+AGG 0.564474 1.2:-50347924 MS.gene30898:CDS
CAAGTCTGGAATTTCAAGAC+AGG 0.565412 1.2:-50346254 MS.gene30898:CDS
GCATGAAGAGAAGATCAATA+GGG 0.565762 1.2:-50348995 MS.gene30898:CDS
TCAACGTCTCAGCTTGTTGG+TGG 0.566127 1.2:-50350682 MS.gene30898:CDS
GTTTCAGAGTTATTGTGAGG+TGG 0.566228 1.2:+50347231 None:intergenic
ACTCTGAAACAGTAAGTGAC+AGG 0.566598 1.2:-50347218 MS.gene30898:CDS
AACTCATTTAGTTGGACAGA+AGG 0.567918 1.2:+50347429 None:intergenic
GTCTGCTTCAAGCCATTCAG+AGG 0.568076 1.2:-50352120 MS.gene30898:CDS
AACGACAGTTGAACGCCACT+AGG 0.569474 1.2:+50349285 None:intergenic
AGGGGTGTGTCGCCAGAGAG+AGG 0.571420 1.2:+50348760 None:intergenic
ATGTATCCTTACATTAACAA+TGG 0.571958 1.2:+50344178 None:intergenic
AAGTTCAACACAATCGGCAA+TGG 0.572318 1.2:-50352171 MS.gene30898:CDS
GTGAGAGACCTGGTTAAAGC+CGG 0.573287 1.2:+50346216 None:intergenic
GTCTGGAATTTCAAGACAGG+TGG 0.575671 1.2:-50346251 MS.gene30898:CDS
TAAGTGAAACATAATCCTCC+AGG 0.575930 1.2:+50346293 None:intergenic
TGTTTGGAATCGGTCTGTGA+AGG 0.576631 1.2:-50346543 MS.gene30898:CDS
ACTATTATATCAAGCTTGAG+TGG 0.577573 1.2:-50351978 MS.gene30898:CDS
TAAAACAAAATACTTGGCAC+CGG 0.578309 1.2:-50349121 MS.gene30898:CDS
ACTTGATCCTGAGCTTGGTA+GGG 0.579205 1.2:-50346604 MS.gene30898:CDS
TTCAATTGCCATCAAATACA+AGG 0.580500 1.2:-50348411 MS.gene30898:CDS
AAGTGTAACACAGGCACTTG+GGG 0.583851 1.2:+50349229 None:intergenic
TTTCGGACAATAGTCAACTT+CGG 0.583993 1.2:+50343966 None:intergenic
CGATTGTGTTGAACTTACAT+CGG 0.584306 1.2:+50352178 None:intergenic
GCAAGTTTATCCGTTTGCCA+TGG 0.584844 1.2:-50349654 MS.gene30898:CDS
CCAGCAATCTCAGAACGTGC+AGG 0.586068 1.2:-50348370 MS.gene30898:CDS
ATGGGCACAGCCTCCATGAA+AGG 0.588680 1.2:+50351257 None:intergenic
GTTGGCCATGGTCAAACTCT+CGG 0.589724 1.2:+50344057 None:intergenic
CAGTCACTTGATCCTGAGCT+TGG 0.590188 1.2:-50346609 MS.gene30898:CDS
CAAAACGTACTTTCAGGCAA+GGG 0.590578 1.2:+50348611 None:intergenic
TATGATGAAGAAGTGGGCAC+TGG 0.590871 1.2:-50347075 MS.gene30898:CDS
AAGCAATTAATGGGAAGTAG+AGG 0.591066 1.2:-50352299 None:intergenic
TCTGCATTTGACCTCTCACA+TGG 0.593150 1.2:-50350709 MS.gene30898:CDS
AAAGGTGTGGGGCTTTCTGA+GGG 0.593542 1.2:+50351275 None:intergenic
GAGAATGAAGTCATGATAGG+TGG 0.593766 1.2:+50343607 None:intergenic
ACTGGAGGAATGCTCGTCGT+TGG 0.594696 1.2:+50344039 None:intergenic
TGTCGTTAGACTCTGGTCAA+AGG 0.595438 1.2:-50349269 MS.gene30898:CDS
GTTCAACTGTCGTTAGACTC+TGG 0.597960 1.2:-50349276 MS.gene30898:CDS
TAACTCATACAAAGTCCTGA+AGG 0.598862 1.2:+50350762 None:intergenic
AATGCTAAAACTTTATCATG+AGG 0.600450 1.2:+50347660 None:intergenic
AATAACTGATTACACCAGAA+AGG 0.600465 1.2:+50347333 None:intergenic
TCTCCTGCAGAAGCTTGGGA+TGG 0.601685 1.2:-50349793 MS.gene30898:CDS
TGTGTTGACAACCATGGACG+AGG 0.605284 1.2:+50346901 None:intergenic
CTCTTGTATGCCATAACAGA+GGG 0.605670 1.2:-50343642 MS.gene30898:CDS
GACTGCTAGCTGTGTAACCA+TGG 0.608389 1.2:+50344204 None:intergenic
GCTTCAAAGCTGAATAGGAA+AGG 0.609600 1.2:+50347300 None:intergenic
TAGTTTCATCATTTGTGCAG+CGG 0.609816 1.2:+50347131 None:intergenic
TTCAGAGGAAGAGCCAGAGA+AGG 0.609977 1.2:-50352105 MS.gene30898:CDS
TCAAAATTGGTGTACCCTAG+TGG 0.610121 1.2:-50349300 MS.gene30898:CDS
AGAACAGTATCAGGATACCC+AGG 0.611242 1.2:+50346447 None:intergenic
TTAACTAACCTGGATCAACA+TGG 0.611270 1.2:+50349761 None:intergenic
TGGTTCGGGCATGTGGAGAG+AGG 0.612565 1.2:-50346998 MS.gene30898:CDS
GAAGTTGACTATTGTCCGAA+AGG 0.615155 1.2:-50343964 MS.gene30898:intron
AAGTTCATCCGACATTTCTG+AGG 0.615184 1.2:+50351044 None:intergenic
TAACTAACCTGGATCAACAT+GGG 0.616198 1.2:+50349762 None:intergenic
ACAGTAAGTGACAGGCGACT+GGG 0.618520 1.2:-50347210 MS.gene30898:CDS
ATCCTTACATTAACAATGGG+AGG 0.619525 1.2:+50344182 None:intergenic
GTAGGTAAATATGAGAAACC+TGG 0.620092 1.2:-50346311 MS.gene30898:intron
TCAAAGGTCTGCTTCTAGAG+AGG 0.621716 1.2:-50349253 MS.gene30898:CDS
AGTACGGCCAACTGACCAGA+AGG 0.621879 1.2:+50351945 None:intergenic
AATCCTCCTGGAGGAAGCCG+AGG 0.623954 1.2:+50344002 None:intergenic
AGAGTCAATTTAGGATCCAG+AGG 0.625003 1.2:+50347834 None:intergenic
TGAAAGATATCTATGGCCAA+AGG 0.627351 1.2:-50348506 MS.gene30898:CDS
ACTGTTTCAGAGTTATTGTG+AGG 0.627647 1.2:+50347228 None:intergenic
ATCACTTGGCCAATATATGG+GGG 0.630224 1.2:-50348875 MS.gene30898:CDS
GGAAATTCTGAGTTGGAACA+GGG 0.632000 1.2:-50346522 MS.gene30898:CDS
ACGACAGTTGAACGCCACTA+GGG 0.633007 1.2:+50349286 None:intergenic
TTGCTTGAGTGACTGTGCTG+AGG 0.633950 1.2:-50348569 MS.gene30898:CDS
TTTGATGGCAATTGAAGCGG+TGG 0.634055 1.2:+50348418 None:intergenic
GTGGTGTTAGTGCAAAATTG+TGG 0.636619 1.2:-50347770 MS.gene30898:CDS
TTCCTGATTAATATAGAAAG+GGG 0.636899 1.2:+50348742 None:intergenic
CGGACTCCAAGATCCGGTCG+CGG 0.637555 1.2:+50347151 None:intergenic
GTTGCTAAAGCACTTCAAGA+CGG 0.639670 1.2:-50346814 MS.gene30898:CDS
GTATTTGATGGCAATTGAAG+CGG 0.640188 1.2:+50348415 None:intergenic
GACAGATCTATGTGAAACAC+AGG 0.642506 1.2:-50348341 MS.gene30898:intron
GTGTGCCAGTCACGAACTGG+AGG 0.643064 1.2:+50344024 None:intergenic
AACGGCACATCCATTAGGAA+CGG 0.644121 1.2:+50348639 None:intergenic
AGTGGAATATGATGAAGAAG+TGG 0.644187 1.2:-50347082 MS.gene30898:CDS
CAGCCTCCATGAAAGGTGTG+GGG 0.644954 1.2:+50351264 None:intergenic
TAAAGCACTTCAAGACGGAA+GGG 0.648126 1.2:-50346809 MS.gene30898:CDS
TATGCCATAACAGAGGGTCA+AGG 0.648375 1.2:-50343636 MS.gene30898:CDS
ACATGACGAATAGACATCCA+TGG 0.650937 1.2:+50349637 None:intergenic
TTTGCACAAGTCATCACACT+AGG 0.653690 1.2:+50343812 None:intergenic
TTGAGCATGTCGACTGACGC+AGG 0.655636 1.2:-50349030 MS.gene30898:CDS
TTAATTGGGATAGAGTCGCT+CGG 0.655783 1.2:+50350971 None:intergenic
ACCGAGGCAGTAGAAGAACT+AGG 0.656857 1.2:+50352206 None:intergenic
ACACCTCGGCTTCCTCCAGG+AGG 0.657005 1.2:-50344005 MS.gene30898:CDS
ATTATCCGAGAGTTTGACCA+TGG 0.657833 1.2:-50344062 MS.gene30898:CDS
GGAAGTACCAATTACCTGGT+CGG 0.658490 1.2:+50351674 None:intergenic
GATCACATTAAGTTCGACCA+TGG 0.659611 1.2:-50344221 MS.gene30898:CDS
CTGTAACTCCTGACACACCA+AGG 0.659651 1.2:+50347026 None:intergenic
GATGAAGAATGACAATCCGA+AGG 0.664348 1.2:+50347693 None:intergenic
CGGAGAGAACGATTCTTGGG+CGG 0.665814 1.2:-50344367 MS.gene30898:intron
CCTGCCTGTAAGCAAGCAAG+TGG 0.667610 1.2:+50351535 None:intergenic
AATGGAGCCCCATGATGACA+TGG 0.667701 1.2:-50352153 MS.gene30898:CDS
GCGAGTGGCTCTTTCTACTG+TGG 0.668144 1.2:-50351318 MS.gene30898:CDS
ACGTTGATACACCATGTGAG+AGG 0.674768 1.2:+50350698 None:intergenic
ACAAGAAAACCAGCTGATCG+AGG 0.674778 1.2:+50351759 None:intergenic
AGTTCGTGACTGGCACACCT+CGG 0.679497 1.2:-50344019 MS.gene30898:CDS
ACTTACATCGGTTTGAACCG+AGG 0.680058 1.2:+50352190 None:intergenic
CACAAGTCATCACACTAGGT+AGG 0.681659 1.2:+50343816 None:intergenic
GAAGTATCCATGTCATCATG+GGG 0.681660 1.2:+50352146 None:intergenic
GCTCTTGTATGCCATAACAG+AGG 0.682277 1.2:-50343643 MS.gene30898:CDS
AGCAGTCAATGTGAATGCTG+GGG 0.683168 1.2:-50348120 MS.gene30898:CDS
TCTTTCGAGGCAATGCACCA+TGG 0.683196 1.2:+50347187 None:intergenic
GTGGAATATGATGAAGAAGT+GGG 0.686774 1.2:-50347081 MS.gene30898:CDS
TTTCAGGCAAGGGTAAGGAA+CGG 0.690592 1.2:+50348621 None:intergenic
GGTAAATATGAGAAACCTGG+AGG 0.695517 1.2:-50346308 MS.gene30898:CDS
TAGAGCAGCTGTGAAACCTG+AGG 0.698518 1.2:-50347724 MS.gene30898:CDS
AGAGATGCCAATCCTCCTGG+AGG 0.712039 1.2:+50343993 None:intergenic
GTATCTTGTGTTGACAACCA+TGG 0.715781 1.2:+50346895 None:intergenic
TTCAGGGTCTGATCACACCA+TGG 0.719758 1.2:-50346421 MS.gene30898:intron
TCAACACAAGATACATCTGG+TGG 0.725886 1.2:-50346886 MS.gene30898:CDS
AAGCCCCACACCTTTCATGG+AGG 0.732117 1.2:-50351267 MS.gene30898:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.2 gene 50343617 50352312 50343617 ID=MS.gene30898
chr1.2 mRNA 50343617 50352312 50343617 ID=MS.gene30898.t1;Parent=MS.gene30898
chr1.2 exon 50351689 50352312 50351689 ID=MS.gene30898.t1.exon1;Parent=MS.gene30898.t1
chr1.2 CDS 50351689 50352312 50351689 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50351483 50351593 50351483 ID=MS.gene30898.t1.exon2;Parent=MS.gene30898.t1
chr1.2 CDS 50351483 50351593 50351483 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50351223 50351339 50351223 ID=MS.gene30898.t1.exon3;Parent=MS.gene30898.t1
chr1.2 CDS 50351223 50351339 50351223 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50350963 50351121 50350963 ID=MS.gene30898.t1.exon4;Parent=MS.gene30898.t1
chr1.2 CDS 50350963 50351121 50350963 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50350669 50350830 50350669 ID=MS.gene30898.t1.exon5;Parent=MS.gene30898.t1
chr1.2 CDS 50350669 50350830 50350669 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50349770 50349922 50349770 ID=MS.gene30898.t1.exon6;Parent=MS.gene30898.t1
chr1.2 CDS 50349770 50349922 50349770 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50349570 50349691 50349570 ID=MS.gene30898.t1.exon7;Parent=MS.gene30898.t1
chr1.2 CDS 50349570 50349691 50349570 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50348342 50349485 50348342 ID=MS.gene30898.t1.exon8;Parent=MS.gene30898.t1
chr1.2 CDS 50348342 50349485 50348342 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50348097 50348180 50348097 ID=MS.gene30898.t1.exon9;Parent=MS.gene30898.t1
chr1.2 CDS 50348097 50348180 50348097 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50346759 50347973 50346759 ID=MS.gene30898.t1.exon10;Parent=MS.gene30898.t1
chr1.2 CDS 50346759 50347973 50346759 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50346422 50346652 50346422 ID=MS.gene30898.t1.exon11;Parent=MS.gene30898.t1
chr1.2 CDS 50346422 50346652 50346422 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50346225 50346329 50346225 ID=MS.gene30898.t1.exon12;Parent=MS.gene30898.t1
chr1.2 CDS 50346225 50346329 50346225 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50344368 50344448 50344368 ID=MS.gene30898.t1.exon13;Parent=MS.gene30898.t1
chr1.2 CDS 50344368 50344448 50344368 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50344190 50344258 50344190 ID=MS.gene30898.t1.exon14;Parent=MS.gene30898.t1
chr1.2 CDS 50344190 50344258 50344190 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50343965 50344093 50343965 ID=MS.gene30898.t1.exon15;Parent=MS.gene30898.t1
chr1.2 CDS 50343965 50344093 50343965 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50343781 50343864 50343781 ID=MS.gene30898.t1.exon16;Parent=MS.gene30898.t1
chr1.2 CDS 50343781 50343864 50343781 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
chr1.2 exon 50343617 50343682 50343617 ID=MS.gene30898.t1.exon17;Parent=MS.gene30898.t1
chr1.2 CDS 50343617 50343682 50343617 ID=cds.MS.gene30898.t1;Parent=MS.gene30898.t1
Gene Sequence

>MS.gene30898

ATGGGAAGTAGAGGTCAAAAGCGTCCAGAAATGGTAGATGAACTGCCTGCTGATAAGAGAGCGTGCAGTTCGTTAGATTTTAGACCTAGTTCTTCTACTGCCTCGGTTCAAACCGATGTAAGTTCAACACAATCGGCAATGGAGCCCCATGATGACATGGATACTTCTTCGTCTGCTTCAAGCCATTCAGAGGAAGAGCCAGAGAAGGATTCAGCTGATGGATCATGTGATTCAGATGAAATGGAGCACTATCATAGCACTCTCCACGAATATCATAGACAGAGACTATCGAGTGATCATGGAAAATTTAAAACTATTATATCAAGCTTGAGTGGACAAACTGAACCTTCTGGTCAGTTGGCCGTACTCACTGAACTCTGCGAAGTTCTGTCATTTTGTACAGAGGGTTCAATCTCCAGCATGACTTCAGACTTGTTATCACCACTACTTGTAAAGCTTGCAAAACATGAGAGTAACCCAGAGATAATGTTGTTATCTATAAGGGCTATCACTTATATATGTGATCTGTATCCTCGATCAGCTGGTTTTCTTGTTCGTCATGATGCTGTTTCTGCTTTATGTCAAAGGTTACTAACTATTGAGTATCAAGACGTAGCCGACCAGGTAATTGGTACTTCCTTGTTTGTAAGATATGTTTTTCATTTTCTTCTGTTGCTTTTTTTTATAGTTTGTAAGTTGTAGCTATTGTTTTTATCCAGTGTCTTCAAGCATTGGAGAAAATATCGAGAGAACAACCACTTGCTTGCTTACAGGCAGGGGCAATTATGGCTGTTCTGAATTATATTGATTTCTTCTCAACAAGCATACAGGTAAGCATCTAATACAAAGGCATCGTCTTCATAAGTATTGACAGTTCATTTTTGGTTCAAAAATTTGAAATAAAAAATATTTTAAATCGTTAGATTGGAGAATAGTTTTCTCATTTTACTAATGTATCTTTTCCCTCTCACAGCGAGTGGCTCTTTCTACTGTGGTCAACATATGCAAGAAGCTTCCCTCAGAAAGCCCCACACCTTTCATGGAGGCTGTGCCCATATTATGCAATCTTCTTCTATATGAGGATCGGCAGGTACCGATGATTGGACTGTAGATATTACACTTACGTATTTGTTGTGGGTTTGATTTCCTTTTTTTTGTATTCTTTACTGAAGTGCAAATGTATTTCCACAGCTTGTCGAAAACGTTGCTACCTGCTTAATCAAAATTGTTGATCGAGTTTCTCATTCCTCAGAAATGTCGGATGAACTTTGTAAGCATGGATTGATTCAACAGGTCACACATCTCTTAAGTGTAAATGGCCGAGCGACTCTATCCCAATTAATTTATAATGTAAGCAATTTTTTATATGCTATTTTCATATCCTATATTTCTCCTTTTTTATTTTTTATTTTTTTATTTTTTTTTATGTGCATGAACTTTGATGTTGTTATGAAATTATGAATCTATTATTTTGCTTGACAGGGTTTGATAGGATTACTTGTCAAACTTTCATCGGGATCAGTCGTAGCCTTCAGGACTTTGTATGAGTTAAATATAAGCATCACATTGAGAGATATATTGTCTGCATTTGACCTCTCACATGGTGTATCAACGTCTCAGCTTGTTGGTGGACACTGTAATCGGGTACGAAGCTTGGATTTGTTTCTGTTTTTGTCTTGTACTGGTGTGCAGCTATAGGGTTTGATAAGTTTCCTGTTTACGAGTTGGATTATATCGTTATAGTCATTTAGTTGTTGTAACTAGTTCAGTAATTGGCAATTTTTTAATATTGATTGTGATAATAATGCAAGACTATAGTTAAATGTTCATTTGTGAGTATCCCTATGTAGCCCCTAAAAGTATCCTTTATCTACACATTAACAGTAACTTGTTACTTTAAAACTCTCGTCATGATAGAGTATAGGGAGGGGTCTGATTCATTTTGAGTCTGTTGTAGGAAATCTTACCTTACTTTTTTTAAGAAGTTGATTCACACTTACTTTTTTGAAGTTGATTCACAACTCGAACATGGACTTCCTAGTCACATTGCAGTAAGAAAGAAATTTATGATAAAGAGAAATTTAGGTCTGATTGTCATTGGATATCTGAATTTTAGGAAATTTATGAAGTCTTTATGGTTCAGTGAAAAATGTATCTAGAAGGCTGCAATAAGGCACGTTGAAATATAATTCTTGTTTAATACAAGTGGTGGATTGCTTTATTCTGTTTCAAAATTATACCATTCAATTCTTTTTGAGTGTCTTTATCTAGCAGTGTCAGTCTGAAACCAGGCAAGGTTTTTCTTGTAATTGATTCTTGTTTGTGTGTTTTGTAAGATTTCTTGTATTGAGCAGTGTAAAAGGTTTTCTTATTGTTTGTTGACCTTCTAGGTATATGAAGTACTCAAATTGCTGAATGAACTTCTCCCTGGCCTGGAAAAAGATCCGAATAATCAACTAGCATTGGACAAAGAATCCTTCCTAGCTAATCATCCAGATCTCCTGCAGAAGCTTGGGATGGATGTGTTTCCCATGTTGATCCAGGTTAGTTAATTTTCTTCTAGTTAGCTCAATACTCTACCGTTTTTACTACAATTAAATACCTATCTCATCTTTGCACAGGTGTTTAATTCTGGTGCAAGTTTATCCGTTTGCCATGGATGTCTATTCGTCATGTACAAGTTTGTTTGTTTGACCAAATCTGGCATGCTTGTGGAGCTTCTTAAGAACGCCAATATTTCAAGGTGAAACGGGCTTTCTTATCCTTGGAGTTGCTATATTATTTATATTTTGTTTAAGGTATTGACTTTATCTGGTTAATGTGACAGTTTTTTGGCTGGAGTTTTCACTCGGAAGGATCATCATATGCTAATGTTAGCCTTACAGATAGCTGAGATAATCCTTCAAAATTTTTCTGATATTTTCTTGAAGTTATTTATAAAGGAGGGTGTCTTTTTTGCCATTGAGGCACTCTTAACACCAGAAAGATCATCAAAATTGGTGTACCCTAGTGGCGTTCAACTGTCGTTAGACTCTGGTCAAAGGTCTGCTTCTAGAGAGGTCCCCAAGTGCCTGTGTTACACTTTTTCAACTGCCCAATCTCCTACATCATCAGAAGCCAAAAAGTGCAAACTTGACAAAGACTCTGTTCATAACCTTGCAGAGCATATTAAAACAAAATACTTGGCACCGGAATTATATGATTCTGAGAAAGGATTGACTGATATTTTGAAGAATCTCAGAGCACTGTCTAACGATTTGTTGAGCATGTCGACTGACGCAGGTGCTCTTGCTGTGCATGAAGAGAAGATCAATAGGGTACTGGATCAAATTATGGACAAGCTTATTGGCAAGGAAGAAGTTTCTACTTTTGAATTTATTGAGAGTGGAGTTGCAAAAGCACTTCTTAATTATTTATCACTTGGCCAATATATGGGGGAAAACAAGGGGATGCATGGTGTTTTTGGTCATAATGCTGTGATAGAAAAACGATTTGAGGCTTTAGCTAGTATATGCTTACGTACTTTTCAGCCTCTCTCTGGCGACACACCCCTTTCTATATTAATCAGGAATCTGCTGAGCGCACTGACTTCATTGGAAGCTTTTCCTATTATTCTGAGCAACGTACAAAAAATGAGAAATTCGTTTGCTACCGTTCCTAATGGATGTGCCGTTCCTTACCCTTGCCTGAAAGTACGTTTTGTTAAGGAGGAGAAAGAAACTTGCTTGAGTGACTGTGCTGAGGATTTTTTTACTGTCGACCCTTTTTCTTCTTTGCACTCAATTGAAAGATATCTATGGCCAAAGGTCAGCGTAAAAAGTGCAGAGGATGAGAAATTATCATCTGGTCAAGTAGTGTTGCAACCTGAAAGTCCACCGCTTCAATTGCCATCAAATACAAGGTCCTGTGCAGATGAAGTTCCAGCAATCTCAGAACGTGCAGGCATGTCGACAGATCTATGTGAAACACAGGTAATATTTGTAACCACAGTCAGTGGTTTACTGAAGTGGCAGCCTATTTATGCATTTCCCCCTAGTAAATTTATCTTGTTCTTAGGGAATGAGGGGTTGTTTCTTAAATTAGTGTTTTGTTTTTAAAAAAATGAAGAATTTCAACTATACTGGTTCTGCAGGGGGAAGAGCCAAAGACATCACATCCTAGACCCGATCAAGCAGTCAATGTGAATGCTGGGGAATCATCTTCTTCAGGAATTCAGGTTTTAATCTTGTTACTGGTTAGGTTATAATGAAGAACATTGTTGCATGTTATTTGTGTCAAAGTATGTTTATAGTTATGTTACACTTGCATATATTTAAATTTTTTGTGTCTTATCTAACAGATTGCAGAACAAGAAATGCATTTTGTTGCAGAATCAGACTCAAAACTAGGAAAAGAGCATCCTGCATCTTGTAGCAACAAAGCTGCCGATAAACTTATTTTTTACCTTGAAGGACAACCTCTGGATCCTAAATTGACTCTATATCAGGCAATTCTTGGCCAAATAGTAAAACAAAATGATAGTGGTGTTAGTGCAAAATTGTGGAGTCATGTGCATACATTAACCTATAGAGCAGCTGTGAAACCTGAGGACATAATGCCTTCGGATTGTCATTCTTCATCTCAAGATTTTCCTCATGATAAAGTTTTAGCATTATATCAGCGGACACCTTTTTTATCAGACATGTTCTATAGTGAACTTGTTTCTGATTTGGAGAAGTCAAGTCCAACTTATGATATTCTGTTTCTTCTTAAAAGCTTGGAAGGCATGAACAGATTTATTTTTCATCTCATGTCACGCGAAAGAATGTGTGCTTTTGCTGAAGGTAAAGTTGATAATCTGGATAGCCTAAAAATAACAGTTCCTTCTGTCCAACTAAATGAGTTCGTGAGCAGTAAGTTGACAGAGAAGCTGGAGCAACAGATGAGGGACTCTATGGCAGTCTGCGTTGGCAGTATGCCTTTCTGGTGTAATCAGTTATTGGCTTCTTGTCCTTTCCTATTCAGCTTTGAAGCAAGATGCAAGTACTTCAAACTGGCAGCATTTGGTCAGCCACGAATGCCACCTCACAATAACTCTGAAACAGTAAGTGACAGGCGACTGGGCCATGGTGCATTGCCTCGAAAGAAGTTTTTAGTTTACCGCGACCGGATCTTGGAGTCCGCTGCACAAATGATGAAACTACATGCCAGTCATAAAGTGGTTCTTGAAGTGGAATATGATGAAGAAGTGGGCACTGGTCTTGGACCAACTTTGGAATTTTATACCTTGGTGTGTCAGGAGTTACAGAAGTCTGGTTCGGGCATGTGGAGAGAGGATGCTTCTTCATATACCATAAAGACAAACTTGCAGGCTGAGGAAACAGGAATCCATTCTCTTTATGGACTCTTTCCTCGTCCATGGTTGTCAACACAAGATACATCTGGTGGCATACAGTTCTCTGAAGTAACAAATAAATTTTTCCTTTTAGGTCAAGTTGTTGCTAAAGCACTTCAAGACGGAAGGGTCTTAGATCTCCACTTTTCTAAAGCCTTCTATAAACTTATTCTTGGAAAGGTAATTGATTTTGGGTGCAATTAATGAAACTTCATACGAGCTTGCAACTTGTAGTAAGATGGAAACTGACTTAACCTTTCTATTTGCTTATAACTTGTCTTTTTAGGAACTTTATCTTTACGACATACAGTCACTTGATCCTGAGCTTGGTAGGGTACTGCATGAGTTTCAAGCACTAGTTAACAGGAAATTTTGTTTGGAATCGGTCTGTGAAGGAAATTCTGAGTTGGAACAGGGACTAAGCTTTAGAGATTCCAGAATTGAGGATCTTTGTCTTGATTTTACTCTTCCTGGGTATCCTGATACTGTTCTTGCTTCAGGGTCTGATCACACCATGGTAAAATATTGCTTGATATTTTTGCTTTGCAATTTTTGTTCTAACCCTTTTGTTGTTGGAATATAAACTTAATATTTCATCCTGTTTGGTAGGTAAATATGAGAAACCTGGAGGATTATGTTTCACTTATTGTTGATGCAACTGTCAAGTCTGGAATTTCAAGACAGGTGGAAGCCTTCAAATCCGGCTTTAACCAGGTCTCTCACTTTGTCTTGATAATAGTTGGAATATTTTAACCATAACCTTTTTGGTTGTGTTATATTCACTGTCACTATAGAAGTTGAAGAGAATTGCATCTCACGAGAATAAAAAAGCCCCAAAAGTTGGGGTTTACATAATACATGATGAAAAAAAAAAATGAATATGGGCTTGAAACTAATTTCTATATATAAGAAGCTTTTTCAATCAATTGCATGGTCTGAAGGGCCACATCACATGAGGTCATGTGTTCAATTTGTGAACTAAATAAGTTTATAGAGAATATTAATTTAAGGGATTGTTTCATTCAAGGAAAAGTGTTCTGTTTAATTTCTTACTTTAACTAAGAATTACAAAAGTGCCGCTCAACTTCCAACCTTGTTTTCCTTTGTTCTCTGTGTATGCAATGTTTTATACAGAAAACATTGAAAATAAATTGTTATTTTCATTATTGCTTGTATTAATACTTTAAAACAAATAATAAAGTGAAAACAAAATGAACGCTTTTGCAATTATTAATGAAAACAGAAATGAAAAATATCTTCTCAAACCGAACAGTTACTTTGTTTGGGAGTTTGGAGGGGAGGGGAGGGAGGGTTTTGGAAAAAAGGAAGGAGCGAGTGGAAGAAATAGAAGACATTGGGAGGAGAGGGCTATGGAGGTTCACAATACAAAATCCCCCTTGTTTGGGGGAACTAAAAAATTGTATTGGGGGTTTTTGGAGGGTTCTATGTTGTGATAATACTCTTAAAATCTAAAATATATTAAATCAATAAACATTAGTTTATTATTCTCTAAAAAAATGTTCTTTCAAAAAAAGCCCTCCCTTCCCCTCCCCTTCAAACTCCCAAACAAAGCCTTAAAATCTCAACAAGTTTCAGAGCCGGATCGGAAAGAAAGAAAATAGAAGCATTATTGGAAGAAAAAAAAAATTCATTTAATAAGAAGTTAGTTGATTATTTTAGGGAAATGCTAACTTGTTAAAAAGCTAAAGATGGAATTATTTTCTTGGAAATTGTGTATTTAATGTTGTATAGTTTTAAACATTTATATTTTCAAAACAAAATTTATTTCTTATTTCCTTTTTTAGTTCCTTAACTTGTGCCCTTAGGGCATAAGTTAGTATGAGCCATTATTTTATGATCATTTTGAAATACCGTGCAGTAATAAAGCCTTACTGGTACACTGGTATTTAATTTTCTTTGTTTGGCAGTTATGCTCCAGCCTAACATTTGTTTCTTTTACTTTTTTGTCATGAAAAGGTTAATTATTTTCTGTAACCTTTTTTGTCATTTTCGCCCACTGGAATAATTTGACTTAATAGAAGGATAAAAATCCACAAGTCCTAGTTACATCTTACCGTTATCTGTGCTGTCTGGTGTTGTTTGGGTTTTTCATTCTGTGGTCTTATTTATAATTTGGGATCTGCAATCAGCTGTTATGGTTTTTAGGACCATTACCGGTTTTATAATTTCTGCCTATGTTCCTAGGGTCATTACACACAGGTGTTAAAGTTTATTGCTTATCTTTGTGCTCTTGTTTTCATTACGCTTTTAAATGCTAAAATATATTGATAGTTAGAACTGGGATCCTGCACTGGAACTTGGGGAAAAATGGGATATGCGAGAAGTTTGTTTAATATACTGTCAGAACTAGGTTTTGTGTCTTGACTGCCGAAGTCATTTCTTATTTATATATATATGACCGCTCATGAATTTCTTATCTATCTTCGTTGGGATTCTCATTATATATATATATTTTTTTAAAACTTGCAGGTTTTTCCCATTGAACATCTTCAGATTTTCTACGAAGAAGAACTTGAGCGTATACTTTGCGGAGAGAACGATTCTTGGGCGGTATGTATAATTTATTTTAATCAATTTGTATATATGTCCTTTTCTATTAGAGCGGGATGAAACTTTTTGTTTAAAAAAAGGTTTGATTATAGTAATGCCTTGTTAGCAGATCAATGAGCTCGCAGATCACATTAAGTTCGACCATGGTTACACAGCTAGCAGTCCTCCCATTGTTAATGTAAGGATACATGTAGTTTTAGATATTGTTTTGATCTTATGTTCAGAATCCTTTTTTTTTTTTTTTTGGACTGAATTTCTGTCATCAACAACTCAGTTGTTGGAAATTATCCGAGAGTTTGACCATGGCCAACGACGAGCATTCCTCCAGTTCGTGACTGGCACACCTCGGCTTCCTCCAGGAGGATTGGCATCTCTCAATCCGAAGTTGACTATTGTCCGAAAGGTGTACAGATTTTACTGATACACTCTATTTTTCACCATGTTTTTTACACGTAACATGTCCTTTTTCTTTGTAACATCTTATATTCTTGCGTGTTCAACAGCATTGTAGCAACCAAGCAGACACAGACCTACCTAGTGTGATGACTTGTGCAAATTACCTTAAGCTACCTCCGTATTCGTCAAAAGTACCGCATCAGTCTTCTCTGCTTCAAACTTTTAAATACTAAAAACACTTTTTTTTTTGAAAAAGATCTAAATATTCTGACACTTAATTGAATTTCAGGAGAAGATGAAAGAGAAGCTCTTGTATGCCATAACAGAGGGTCAAGGATCTTTCCACCTATCATGA

Protein sequence

>MS.gene30898.t1

MGSRGQKRPEMVDELPADKRACSSLDFRPSSSTASVQTDVSSTQSAMEPHDDMDTSSSASSHSEEEPEKDSADGSCDSDEMEHYHSTLHEYHRQRLSSDHGKFKTIISSLSGQTEPSGQLAVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAKHESNPEIMLLSIRAITYICDLYPRSAGFLVRHDAVSALCQRLLTIEYQDVADQCLQALEKISREQPLACLQAGAIMAVLNYIDFFSTSIQRVALSTVVNICKKLPSESPTPFMEAVPILCNLLLYEDRQLVENVATCLIKIVDRVSHSSEMSDELCKHGLIQQVTHLLSVNGRATLSQLIYNGLIGLLVKLSSGSVVAFRTLYELNISITLRDILSAFDLSHGVSTSQLVGGHCNRVYEVLKLLNELLPGLEKDPNNQLALDKESFLANHPDLLQKLGMDVFPMLIQVFNSGASLSVCHGCLFVMYKFVCLTKSGMLVELLKNANISSFLAGVFTRKDHHMLMLALQIAEIILQNFSDIFLKLFIKEGVFFAIEALLTPERSSKLVYPSGVQLSLDSGQRSASREVPKCLCYTFSTAQSPTSSEAKKCKLDKDSVHNLAEHIKTKYLAPELYDSEKGLTDILKNLRALSNDLLSMSTDAGALAVHEEKINRVLDQIMDKLIGKEEVSTFEFIESGVAKALLNYLSLGQYMGENKGMHGVFGHNAVIEKRFEALASICLRTFQPLSGDTPLSILIRNLLSALTSLEAFPIILSNVQKMRNSFATVPNGCAVPYPCLKVRFVKEEKETCLSDCAEDFFTVDPFSSLHSIERYLWPKVSVKSAEDEKLSSGQVVLQPESPPLQLPSNTRSCADEVPAISERAGMSTDLCETQGEEPKTSHPRPDQAVNVNAGESSSSGIQIAEQEMHFVAESDSKLGKEHPASCSNKAADKLIFYLEGQPLDPKLTLYQAILGQIVKQNDSGVSAKLWSHVHTLTYRAAVKPEDIMPSDCHSSSQDFPHDKVLALYQRTPFLSDMFYSELVSDLEKSSPTYDILFLLKSLEGMNRFIFHLMSRERMCAFAEGKVDNLDSLKITVPSVQLNEFVSSKLTEKLEQQMRDSMAVCVGSMPFWCNQLLASCPFLFSFEARCKYFKLAAFGQPRMPPHNNSETVSDRRLGHGALPRKKFLVYRDRILESAAQMMKLHASHKVVLEVEYDEEVGTGLGPTLEFYTLVCQELQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFFLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRKFCLESVCEGNSELEQGLSFRDSRIEDLCLDFTLPGYPDTVLASGSDHTMVNMRNLEDYVSLIVDATVKSGISRQVEAFKSGFNQVFPIEHLQIFYEEELERILCGENDSWAINELADHIKFDHGYTASSPPIVNLLEIIREFDHGQRRAFLQFVTGTPRLPPGGLASLNPKLTIVRKHCSNQADTDLPSVMTCANYLKLPPYSSKEKMKEKLLYAITEGQGSFHLS