Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31256.t1 | KEH39362.1 | 95.2 | 624 | 22 | 3 | 1 | 624 | 1 | 616 | 0.00E+00 | 1146 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31256.t1 | Q9SJJ3 | 42.1 | 378 | 162 | 7 | 176 | 526 | 165 | 512 | 3.5e-64 | 247.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31256.t1 | A0A072VC89 | 95.2 | 624 | 22 | 3 | 1 | 624 | 1 | 616 | 0.0e+00 | 1146.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene31256.t1 | TF | HB-BELL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058918 | MS.gene31256 | 0.867754 | 1.08E-65 | -1.69E-46 |
| MS.gene059768 | MS.gene31256 | 0.801831 | 7.48E-49 | -1.69E-46 |
| MS.gene060691 | MS.gene31256 | 0.812851 | 3.44E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31256.t1 | MTR_2g095050 | 95.192 | 624 | 22 | 3 | 1 | 624 | 1 | 616 | 0.0 | 1173 |
| MS.gene31256.t1 | MTR_7g065050 | 47.122 | 278 | 123 | 5 | 236 | 513 | 124 | 377 | 1.88e-76 | 253 |
| MS.gene31256.t1 | MTR_4g019450 | 47.719 | 285 | 116 | 4 | 242 | 521 | 189 | 445 | 6.55e-75 | 251 |
| MS.gene31256.t1 | MTR_8g078480 | 43.416 | 281 | 135 | 5 | 245 | 515 | 384 | 650 | 5.77e-65 | 229 |
| MS.gene31256.t1 | MTR_5g018860 | 41.818 | 275 | 136 | 7 | 245 | 508 | 330 | 591 | 2.94e-60 | 214 |
| MS.gene31256.t1 | MTR_1g057790 | 43.678 | 261 | 128 | 4 | 248 | 502 | 160 | 407 | 3.58e-60 | 212 |
| MS.gene31256.t1 | MTR_8g098815 | 45.211 | 261 | 125 | 5 | 249 | 504 | 185 | 432 | 8.88e-60 | 211 |
| MS.gene31256.t1 | MTR_7g106320 | 47.345 | 226 | 98 | 4 | 303 | 525 | 232 | 439 | 3.64e-59 | 210 |
| MS.gene31256.t1 | MTR_4g051532 | 41.456 | 316 | 153 | 8 | 249 | 555 | 217 | 509 | 1.10e-58 | 209 |
| MS.gene31256.t1 | MTR_1g023050 | 43.310 | 284 | 124 | 7 | 253 | 522 | 174 | 434 | 1.51e-58 | 207 |
| MS.gene31256.t1 | MTR_3g112300 | 40.278 | 288 | 139 | 5 | 245 | 521 | 158 | 423 | 2.61e-58 | 204 |
| MS.gene31256.t1 | MTR_3g112300 | 40.278 | 288 | 139 | 5 | 245 | 521 | 158 | 423 | 8.10e-58 | 204 |
| MS.gene31256.t1 | MTR_3g112290 | 39.216 | 306 | 142 | 9 | 231 | 523 | 154 | 428 | 2.88e-55 | 194 |
| MS.gene31256.t1 | MTR_3g112300 | 38.039 | 255 | 127 | 4 | 245 | 488 | 158 | 392 | 2.20e-43 | 160 |
| MS.gene31256.t1 | MTR_1g016490 | 35.577 | 208 | 114 | 4 | 313 | 519 | 315 | 503 | 4.74e-34 | 136 |
| MS.gene31256.t1 | MTR_3g112300 | 35.470 | 234 | 120 | 4 | 245 | 467 | 158 | 371 | 3.97e-33 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31256.t1 | AT2G27990 | 50.676 | 296 | 105 | 6 | 238 | 526 | 251 | 512 | 4.86e-82 | 270 |
| MS.gene31256.t1 | AT5G02030 | 47.262 | 347 | 137 | 11 | 185 | 511 | 98 | 418 | 2.56e-73 | 246 |
| MS.gene31256.t1 | AT4G34610 | 44.631 | 298 | 137 | 8 | 250 | 543 | 141 | 414 | 1.75e-66 | 227 |
| MS.gene31256.t1 | AT4G34610 | 44.631 | 298 | 137 | 8 | 250 | 543 | 141 | 414 | 1.75e-66 | 227 |
| MS.gene31256.t1 | AT4G34610 | 44.631 | 298 | 137 | 8 | 250 | 543 | 141 | 414 | 1.75e-66 | 227 |
| MS.gene31256.t1 | AT4G34610 | 44.631 | 298 | 137 | 8 | 250 | 543 | 141 | 414 | 1.75e-66 | 227 |
| MS.gene31256.t1 | AT1G75410 | 39.306 | 346 | 192 | 6 | 168 | 508 | 81 | 413 | 1.56e-65 | 224 |
| MS.gene31256.t1 | AT1G75410 | 39.306 | 346 | 192 | 6 | 168 | 508 | 81 | 413 | 1.56e-65 | 224 |
| MS.gene31256.t1 | AT4G36870 | 46.067 | 267 | 124 | 6 | 249 | 508 | 312 | 565 | 3.72e-65 | 228 |
| MS.gene31256.t1 | AT4G36870 | 46.067 | 267 | 124 | 6 | 249 | 508 | 312 | 565 | 3.72e-65 | 228 |
| MS.gene31256.t1 | AT2G23760 | 43.911 | 271 | 133 | 5 | 245 | 508 | 233 | 491 | 4.00e-62 | 217 |
| MS.gene31256.t1 | AT2G23760 | 43.911 | 271 | 133 | 5 | 245 | 508 | 233 | 491 | 4.00e-62 | 217 |
| MS.gene31256.t1 | AT2G23760 | 43.911 | 271 | 133 | 5 | 245 | 508 | 233 | 491 | 4.00e-62 | 217 |
| MS.gene31256.t1 | AT2G16400 | 40.625 | 288 | 146 | 7 | 244 | 530 | 109 | 372 | 3.95e-61 | 211 |
| MS.gene31256.t1 | AT1G19700 | 42.545 | 275 | 130 | 4 | 245 | 508 | 161 | 418 | 4.43e-61 | 213 |
| MS.gene31256.t1 | AT1G19700 | 42.545 | 275 | 130 | 4 | 245 | 508 | 161 | 418 | 4.43e-61 | 213 |
| MS.gene31256.t1 | AT1G19700 | 42.545 | 275 | 130 | 4 | 245 | 508 | 161 | 418 | 4.43e-61 | 213 |
| MS.gene31256.t1 | AT1G19700 | 42.545 | 275 | 130 | 4 | 245 | 508 | 161 | 418 | 4.43e-61 | 213 |
| MS.gene31256.t1 | AT1G19700 | 42.545 | 275 | 130 | 4 | 245 | 508 | 161 | 418 | 4.43e-61 | 213 |
| MS.gene31256.t1 | AT2G35940 | 44.403 | 268 | 123 | 4 | 250 | 502 | 190 | 446 | 1.58e-59 | 211 |
| MS.gene31256.t1 | AT2G35940 | 44.403 | 268 | 123 | 4 | 250 | 502 | 190 | 446 | 1.58e-59 | 211 |
| MS.gene31256.t1 | AT2G35940 | 44.403 | 268 | 123 | 4 | 250 | 502 | 190 | 446 | 1.58e-59 | 211 |
| MS.gene31256.t1 | AT2G27220 | 37.618 | 319 | 146 | 7 | 220 | 538 | 56 | 321 | 7.61e-53 | 187 |
| MS.gene31256.t1 | AT2G27220 | 37.618 | 319 | 146 | 7 | 220 | 538 | 56 | 321 | 7.61e-53 | 187 |
| MS.gene31256.t1 | AT2G23760 | 36.842 | 323 | 133 | 6 | 245 | 508 | 233 | 543 | 1.55e-52 | 192 |
| MS.gene31256.t1 | AT5G41410 | 38.971 | 272 | 146 | 4 | 250 | 508 | 194 | 458 | 2.30e-52 | 190 |
| MS.gene31256.t1 | AT4G36870 | 43.145 | 248 | 121 | 6 | 249 | 489 | 312 | 546 | 4.45e-52 | 188 |
| MS.gene31256.t1 | AT1G75410 | 37.117 | 326 | 187 | 6 | 168 | 488 | 81 | 393 | 1.04e-51 | 183 |
| MS.gene31256.t1 | AT4G36870 | 42.683 | 246 | 121 | 6 | 249 | 487 | 312 | 544 | 1.04e-50 | 184 |
| MS.gene31256.t1 | AT2G27990 | 46.154 | 234 | 88 | 5 | 238 | 467 | 251 | 450 | 1.92e-50 | 181 |
| MS.gene31256.t1 | AT1G75430 | 46.354 | 192 | 85 | 4 | 322 | 508 | 91 | 269 | 7.54e-50 | 175 |
| MS.gene31256.t1 | AT2G27220 | 35.905 | 337 | 145 | 8 | 220 | 538 | 56 | 339 | 3.94e-49 | 177 |
| MS.gene31256.t1 | AT4G32980 | 31.206 | 282 | 169 | 6 | 245 | 524 | 197 | 455 | 9.68e-38 | 146 |
| MS.gene31256.t1 | AT4G32980 | 31.206 | 282 | 169 | 6 | 245 | 524 | 197 | 455 | 9.68e-38 | 146 |
| MS.gene31256.t1 | AT1G75430 | 38.816 | 152 | 75 | 4 | 321 | 467 | 90 | 228 | 1.02e-24 | 105 |
Find 111 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACATGTTGTCACCAATTT+TGG | 0.122717 | 2.4:-7486263 | None:intergenic |
| CATTCAGAACTGAGTGATTT+TGG | 0.129421 | 2.4:+7485660 | MS.gene31256:CDS |
| TAAGAGTTCAAGATTCTTAA+AGG | 0.151069 | 2.4:+7486208 | MS.gene31256:CDS |
| AATTCTCTTTCTTATGTATA+TGG | 0.222196 | 2.4:+7485753 | MS.gene31256:CDS |
| TAGAGAGAAGAGGTATAAAT+TGG | 0.239051 | 2.4:+7488647 | MS.gene31256:CDS |
| AATGATAAGCTTTGTGGTTT+TGG | 0.247497 | 2.4:-7485939 | None:intergenic |
| CTAGCAGGACTCTTTGAATT+AGG | 0.255997 | 2.4:-7486128 | None:intergenic |
| TTCGCAGGACTTCACTTATA+TGG | 0.258775 | 2.4:-7487552 | None:intergenic |
| TTCAATGCCTTATCCATTCT+AGG | 0.259330 | 2.4:-7488513 | None:intergenic |
| ATAGTAGCATAACCAGTAAA+AGG | 0.261980 | 2.4:-7486182 | None:intergenic |
| GCTTTATTCTGCTGATAATC+TGG | 0.263343 | 2.4:-7486398 | None:intergenic |
| CCTTTGGAGTATCAAGAATT+AGG | 0.272397 | 2.4:+7485570 | MS.gene31256:CDS |
| CATTATCATCAGCAACATTA+TGG | 0.277940 | 2.4:+7485627 | MS.gene31256:CDS |
| GTTGCACAAAATTTGTTAGA+TGG | 0.282371 | 2.4:+7486230 | MS.gene31256:CDS |
| GTCAACTAGTTTAGTACTAT+TGG | 0.285954 | 2.4:-7487599 | None:intergenic |
| GTGCCATAAGTTCTCTCATT+TGG | 0.291427 | 2.4:-7488468 | None:intergenic |
| GATTTGAAATAGCATTATTC+AGG | 0.305780 | 2.4:-7487522 | None:intergenic |
| GATTAATGCAGGTATCAAAT+TGG | 0.308082 | 2.4:+7488352 | MS.gene31256:intron |
| TAGTACTAGTTATGGAAATC+TGG | 0.321419 | 2.4:+7486148 | MS.gene31256:CDS |
| AAGAATGGATGGAACACTTA+TGG | 0.325450 | 2.4:+7488686 | MS.gene31256:CDS |
| CATTTCTGACTCTGACCTAT+TGG | 0.330237 | 2.4:-7485850 | None:intergenic |
| AAACCATTTGCATCTGTTGA+TGG | 0.333209 | 2.4:-7487411 | None:intergenic |
| AGTAGCCAACACATGTTTAT+CGG | 0.338043 | 2.4:-7487934 | None:intergenic |
| TATGGTGCTGAAAAGCAATT+AGG | 0.340053 | 2.4:+7485771 | MS.gene31256:CDS |
| ATCCACAACAACAGCATGTT+TGG | 0.346556 | 2.4:+7487704 | MS.gene31256:CDS |
| AATGTTTCCTAGTGCTGATT+GGG | 0.352550 | 2.4:+7486343 | MS.gene31256:CDS |
| GGCTTTGATCCATGCATCTT+AGG | 0.352803 | 2.4:-7487639 | None:intergenic |
| TCATGTCCACTATGTCTATA+TGG | 0.356435 | 2.4:-7488717 | None:intergenic |
| TACTGCTACTTCAAATCCTT+TGG | 0.357101 | 2.4:+7485554 | MS.gene31256:CDS |
| CAATGTTTCCTAGTGCTGAT+TGG | 0.357408 | 2.4:+7486342 | MS.gene31256:CDS |
| ATTTCTGTTGATGAATAAAC+TGG | 0.361530 | 2.4:-7485516 | None:intergenic |
| ATCAACTCACTGATCAATAT+TGG | 0.368498 | 2.4:+7485712 | MS.gene31256:CDS |
| AGAATCGCCACTGCACGTTC+TGG | 0.377371 | 2.4:-7487745 | None:intergenic |
| GAATCAGAATAATTCTTTGC+AGG | 0.380802 | 2.4:+7485806 | MS.gene31256:CDS |
| CATGTGTTGGCTACTCAAAC+TGG | 0.395238 | 2.4:+7487942 | MS.gene31256:CDS |
| AGTCCAAATGAGAGAACTTA+TGG | 0.398547 | 2.4:+7488465 | MS.gene31256:CDS |
| ATTTGGACTGCAATTCTCAT+TGG | 0.400633 | 2.4:-7488451 | None:intergenic |
| AGTCCTGCTAGTACTAGTTA+TGG | 0.414886 | 2.4:+7486140 | MS.gene31256:CDS |
| CAAATTCAATGTATGGAACT+TGG | 0.416249 | 2.4:+7488567 | MS.gene31256:CDS |
| TCCACAATCTCTAGAAATGA+TGG | 0.429326 | 2.4:-7486069 | None:intergenic |
| TGTTGCATCATTAACCTACT+TGG | 0.429908 | 2.4:-7485606 | None:intergenic |
| TGAAAATCAAATTCAATGTA+TGG | 0.431807 | 2.4:+7488560 | MS.gene31256:CDS |
| TTGCACAAAATTTGTTAGAT+GGG | 0.442823 | 2.4:+7486231 | MS.gene31256:CDS |
| ACAAAAGAATAGACCTGAAA+AGG | 0.450106 | 2.4:+7487663 | MS.gene31256:CDS |
| CATGATGTTGTGAGATCACT+TGG | 0.453466 | 2.4:+7488735 | MS.gene31256:CDS |
| GAAACTGAGGTTGCTTCTAA+AGG | 0.458889 | 2.4:+7486293 | MS.gene31256:CDS |
| TCCATCATTTCTAGAGATTG+TGG | 0.465297 | 2.4:+7486068 | MS.gene31256:CDS |
| AGCTACTCCTTACATCAGTC+TGG | 0.473021 | 2.4:+7487468 | MS.gene31256:CDS |
| TCATCCTTTGAATCAGTAGC+AGG | 0.475962 | 2.4:+7487436 | MS.gene31256:CDS |
| ATGCCTTATCCATTCTAGGC+TGG | 0.476270 | 2.4:-7488509 | None:intergenic |
| AAACTGAGGTTGCTTCTAAA+GGG | 0.476654 | 2.4:+7486294 | MS.gene31256:CDS |
| CAGCCAGCCTAGAATGGATA+AGG | 0.478775 | 2.4:+7488506 | MS.gene31256:CDS |
| GAGAACTTATGGCACTGAAG+TGG | 0.480355 | 2.4:+7488476 | MS.gene31256:CDS |
| AGACCTGAAAAGGTTCCATC+AGG | 0.481595 | 2.4:+7487673 | MS.gene31256:CDS |
| GTAGCTTAGGTGTTTCTTTG+CGG | 0.484731 | 2.4:+7486375 | MS.gene31256:CDS |
| CAATAGGTCAGAGTCAGAAA+TGG | 0.486499 | 2.4:+7485851 | MS.gene31256:CDS |
| AGTGATAATGATAAGCTTTG+TGG | 0.494435 | 2.4:-7485945 | None:intergenic |
| TTCATGCAGCCAGCCTAGAA+TGG | 0.494640 | 2.4:+7488500 | MS.gene31256:CDS |
| TCAAGTCTATCACTTCCAAT+AGG | 0.496873 | 2.4:+7485835 | MS.gene31256:CDS |
| AACTGGTCTTTCGCGAAACC+AGG | 0.498308 | 2.4:+7487959 | MS.gene31256:CDS |
| TAGTTTAGTACTATTGGTTG+TGG | 0.502195 | 2.4:-7487593 | None:intergenic |
| CATGTTTATCGGTGTCTGTA+GGG | 0.506317 | 2.4:-7487923 | None:intergenic |
| GTAAATGAGTTAAATGAGGC+AGG | 0.508118 | 2.4:+7488615 | MS.gene31256:CDS |
| AATAGTCAAGGAATTTGTGT+TGG | 0.508836 | 2.4:+7485891 | MS.gene31256:CDS |
| TAGTAGCATAACCAGTAAAA+GGG | 0.510354 | 2.4:-7486181 | None:intergenic |
| AGTTCGCGTGTGGAAGCCTA+TGG | 0.514217 | 2.4:+7488389 | MS.gene31256:CDS |
| TTAGTACTATTGGTTGTGGT+CGG | 0.518791 | 2.4:-7487589 | None:intergenic |
| AGTACTAGTTATGGAAATCT+GGG | 0.524187 | 2.4:+7486149 | MS.gene31256:CDS |
| CAGTGGCGATTCTAAGAGCT+TGG | 0.530709 | 2.4:+7487755 | MS.gene31256:CDS |
| ACATGTTTATCGGTGTCTGT+AGG | 0.537212 | 2.4:-7487924 | None:intergenic |
| ATGTGTACTTCTTCAACCAT+AGG | 0.539006 | 2.4:-7488405 | None:intergenic |
| AGAACTTATGGCACTGAAGT+GGG | 0.539197 | 2.4:+7488477 | MS.gene31256:CDS |
| TGTTGTGAGATCACTTGGAT+TGG | 0.539982 | 2.4:+7488740 | MS.gene31256:CDS |
| TCACATCAAGACTTGGTGGT+TGG | 0.544042 | 2.4:+7486098 | MS.gene31256:CDS |
| ATGTGGAATGAGTTCAAGAA+TGG | 0.547007 | 2.4:+7488671 | MS.gene31256:CDS |
| AAGACCTGCTACTGATTCAA+AGG | 0.547681 | 2.4:-7487440 | None:intergenic |
| GCTTATGTTCATGCAAGAAG+AGG | 0.548768 | 2.4:+7486424 | MS.gene31256:CDS |
| TTCAAAGCCAGACTGATGTA+AGG | 0.549663 | 2.4:-7487475 | None:intergenic |
| TATGGAAATCTGGGTCCACT+TGG | 0.554507 | 2.4:+7486158 | MS.gene31256:CDS |
| GTATTGACAAATCATTTCGC+AGG | 0.555399 | 2.4:-7487567 | None:intergenic |
| AAATCACTCAGTTCTGAATG+AGG | 0.555669 | 2.4:-7485657 | None:intergenic |
| CACAACAACAGCATGTTTGG+AGG | 0.557669 | 2.4:+7487707 | MS.gene31256:CDS |
| GTACCATCAACAGATGCAAA+TGG | 0.563901 | 2.4:+7487408 | MS.gene31256:CDS |
| AAGAGGTATAAATTGGAATG+TGG | 0.564061 | 2.4:+7488654 | MS.gene31256:CDS |
| TTTCCATAACTAGTACTAGC+AGG | 0.567280 | 2.4:-7486143 | None:intergenic |
| ATCATCACATCAAGACTTGG+TGG | 0.576817 | 2.4:+7486094 | MS.gene31256:CDS |
| CCTAATTCTTGATACTCCAA+AGG | 0.577755 | 2.4:-7485570 | None:intergenic |
| CTCCAAACATGCTGTTGTTG+TGG | 0.578756 | 2.4:-7487706 | None:intergenic |
| GTGCAGCTTCAGAACCAAGT+AGG | 0.580096 | 2.4:+7485592 | MS.gene31256:CDS |
| TCAGTGAGTTGATGTGGAGC+AGG | 0.585114 | 2.4:-7485702 | None:intergenic |
| ATGTTTCCTAGTGCTGATTG+GGG | 0.585973 | 2.4:+7486344 | MS.gene31256:CDS |
| AGACACCGATAAACATGTGT+TGG | 0.590173 | 2.4:+7487929 | MS.gene31256:CDS |
| AGTTAAATGAGGCAGGACAA+TGG | 0.596972 | 2.4:+7488622 | MS.gene31256:CDS |
| TGTGGCAAGCCTAAGATGCA+TGG | 0.598137 | 2.4:+7487630 | MS.gene31256:CDS |
| AGAAGTAAATGAGTTAAATG+AGG | 0.599304 | 2.4:+7488611 | MS.gene31256:CDS |
| CTTATGCATCATAATAGTCA+AGG | 0.601239 | 2.4:+7485879 | MS.gene31256:CDS |
| TTAATGCTCGAGTTCGCGTG+TGG | 0.602257 | 2.4:+7488379 | MS.gene31256:CDS |
| GGAATGAGTTCAAGAATGGA+TGG | 0.604592 | 2.4:+7488675 | MS.gene31256:CDS |
| TAATAATATTACACAAAACA+AGG | 0.606372 | 2.4:+7485974 | MS.gene31256:CDS |
| ACTAGTTGACACTAATAATG+TGG | 0.612366 | 2.4:+7487612 | MS.gene31256:CDS |
| TATTGATCAGTGAGTTGATG+TGG | 0.613925 | 2.4:-7485708 | None:intergenic |
| AAAATCATCACATCAAGACT+TGG | 0.614582 | 2.4:+7486091 | MS.gene31256:CDS |
| GACAATGGAGTAGAGAGAAG+AGG | 0.622784 | 2.4:+7488637 | MS.gene31256:CDS |
| ATGTGATGTTTCTGAAACTG+AGG | 0.624579 | 2.4:+7486280 | MS.gene31256:CDS |
| TGTGGATCATGAAAACCTGA+TGG | 0.624654 | 2.4:-7487688 | None:intergenic |
| CAATCTCTAGAAATGATGGA+AGG | 0.631862 | 2.4:-7486065 | None:intergenic |
| AGGCTTTCCAGAACGTGCAG+TGG | 0.656796 | 2.4:+7487738 | MS.gene31256:CDS |
| CGTTCTGGAAAGCCTCTCTG+AGG | 0.663932 | 2.4:-7487730 | None:intergenic |
| TAACCAGTAAAAGGGCCAAG+TGG | 0.664374 | 2.4:-7486173 | None:intergenic |
| TGTTTCCTAGTGCTGATTGG+GGG | 0.672245 | 2.4:+7486345 | MS.gene31256:CDS |
| CATGTTTGGAGGCCTCAGAG+AGG | 0.725435 | 2.4:+7487718 | MS.gene31256:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTAAAACAAAAATTTAAA+AGG | - | chr2.4:7488193-7488212 | None:intergenic | 10.0% |
| !! | TAAATAATTAAGTGTATTAT+AGG | - | chr2.4:7488280-7488299 | None:intergenic | 10.0% |
| !! | AAATTTAAAAGGAATGAAAT+TGG | - | chr2.4:7488182-7488201 | None:intergenic | 15.0% |
| !! | AATTGCAAAGATAAATAAAT+TGG | + | chr2.4:7486606-7486625 | MS.gene31256:intron | 15.0% |
| !! | TAATAATATTACACAAAACA+AGG | + | chr2.4:7485974-7485993 | MS.gene31256:CDS | 15.0% |
| !! | TATATAAAAAATTTGTACCA+TGG | + | chr2.4:7487032-7487051 | MS.gene31256:intron | 15.0% |
| !! | TATCTCTACAAATAATTATA+TGG | + | chr2.4:7486879-7486898 | MS.gene31256:intron | 15.0% |
| !!! | ATGATAGTTATCATTTTTTT+TGG | + | chr2.4:7487310-7487329 | MS.gene31256:intron | 15.0% |
| !!! | TAAAGTCAAAGTAATTTTTT+TGG | + | chr2.4:7487249-7487268 | MS.gene31256:intron | 15.0% |
| !!! | TTTTTTTTTTTTTATGGATC+TGG | - | chr2.4:7488143-7488162 | None:intergenic | 15.0% |
| !! | AATTCTCTTTCTTATGTATA+TGG | + | chr2.4:7485753-7485772 | MS.gene31256:CDS | 20.0% |
| !! | ATGTTTATCTGATGAATTAA+TGG | + | chr2.4:7488315-7488334 | MS.gene31256:intron | 20.0% |
| !! | CTCAAGAATCAAATAAAATT+AGG | - | chr2.4:7487281-7487300 | None:intergenic | 20.0% |
| !! | TGAAAATCAAATTCAATGTA+TGG | + | chr2.4:7488560-7488579 | MS.gene31256:CDS | 20.0% |
| !! | TTAAGTGTATTATAGGAAAA+CGG | - | chr2.4:7488273-7488292 | None:intergenic | 20.0% |
| !! | TTAATTCATCAGATAAACAT+AGG | - | chr2.4:7488315-7488334 | None:intergenic | 20.0% |
| !!! | ATAAAATTTGTTTACACTGT+TGG | + | chr2.4:7486924-7486943 | MS.gene31256:intron | 20.0% |
| !!! | ATACATTGAATTTGATTTTC+AGG | - | chr2.4:7488561-7488580 | None:intergenic | 20.0% |
| !!! | TCAATAGATTTTGTTACTTT+TGG | + | chr2.4:7488235-7488254 | MS.gene31256:intron | 20.0% |
| !!! | TTTCTATGTGTTATTTGTTA+AGG | + | chr2.4:7487847-7487866 | MS.gene31256:intron | 20.0% |
| ! | AATTTGATACCTGCATTAAT+CGG | - | chr2.4:7488353-7488372 | None:intergenic | 25.0% |
| ! | AGAAGTAAATGAGTTAAATG+AGG | + | chr2.4:7488611-7488630 | MS.gene31256:CDS | 25.0% |
| ! | GAATTGTATATTGAGACATT+TGG | + | chr2.4:7488036-7488055 | MS.gene31256:intron | 25.0% |
| ! | TAAGAGTTCAAGATTCTTAA+AGG | + | chr2.4:7486208-7486227 | MS.gene31256:CDS | 25.0% |
| !! | AAAGTATTTGACCATTGTTA+TGG | - | chr2.4:7488086-7488105 | None:intergenic | 25.0% |
| !! | ATGATCTGTTAGATCATTTT+GGG | - | chr2.4:7487142-7487161 | None:intergenic | 25.0% |
| !! | ATTTCTGTTGATGAATAAAC+TGG | - | chr2.4:7485519-7485538 | None:intergenic | 25.0% |
| !! | CTTATGTTTCTCATTTTGAA+GGG | + | chr2.4:7485997-7486016 | MS.gene31256:CDS | 25.0% |
| !! | GATTTGAAATAGCATTATTC+AGG | - | chr2.4:7487525-7487544 | None:intergenic | 25.0% |
| !! | TACAGTAACTTGTAAGAAAA+AGG | + | chr2.4:7486518-7486537 | MS.gene31256:intron | 25.0% |
| !! | TATGATCTGTTAGATCATTT+TGG | - | chr2.4:7487143-7487162 | None:intergenic | 25.0% |
| !!! | CTCTTATTTGTTTTGAAACT+TGG | + | chr2.4:7487208-7487227 | MS.gene31256:intron | 25.0% |
| !!! | GCAAGTTTTAATTTCTGAAA+AGG | + | chr2.4:7486580-7486599 | MS.gene31256:intron | 25.0% |
| !!! | TATTGATTTTCTTAGTATGC+AGG | - | chr2.4:7488221-7488240 | None:intergenic | 25.0% |
| !!! | TTATGTTTCTCATTTTGAAG+GGG | + | chr2.4:7485998-7486017 | MS.gene31256:CDS | 25.0% |
| !!! | TTGCACAAAATTTGTTAGAT+GGG | + | chr2.4:7486231-7486250 | MS.gene31256:CDS | 25.0% |
| AAAATCATCACATCAAGACT+TGG | + | chr2.4:7486091-7486110 | MS.gene31256:CDS | 30.0% | |
| AAACTATATCCGATTAATGC+AGG | + | chr2.4:7488341-7488360 | MS.gene31256:intron | 30.0% | |
| AATAGTCAAGGAATTTGTGT+TGG | + | chr2.4:7485891-7485910 | MS.gene31256:CDS | 30.0% | |
| AATTGTCTCAAGTATATGCA+AGG | - | chr2.4:7486682-7486701 | None:intergenic | 30.0% | |
| ACAAAAGAATAGACCTGAAA+AGG | + | chr2.4:7487663-7487682 | MS.gene31256:CDS | 30.0% | |
| ACTAGTTGACACTAATAATG+TGG | + | chr2.4:7487612-7487631 | MS.gene31256:CDS | 30.0% | |
| AGTACTAGTTATGGAAATCT+GGG | + | chr2.4:7486149-7486168 | MS.gene31256:CDS | 30.0% | |
| ATAGTAGCATAACCAGTAAA+AGG | - | chr2.4:7486185-7486204 | None:intergenic | 30.0% | |
| ATCAACTCACTGATCAATAT+TGG | + | chr2.4:7485712-7485731 | MS.gene31256:CDS | 30.0% | |
| CAAATTCAATGTATGGAACT+TGG | + | chr2.4:7488567-7488586 | MS.gene31256:CDS | 30.0% | |
| CATTATCATCAGCAACATTA+TGG | + | chr2.4:7485627-7485646 | MS.gene31256:CDS | 30.0% | |
| CTTATGCATCATAATAGTCA+AGG | + | chr2.4:7485879-7485898 | MS.gene31256:CDS | 30.0% | |
| GAATCAGAATAATTCTTTGC+AGG | + | chr2.4:7485806-7485825 | MS.gene31256:CDS | 30.0% | |
| GATTAATGCAGGTATCAAAT+TGG | + | chr2.4:7488352-7488371 | MS.gene31256:intron | 30.0% | |
| GGTTAATTGTCTTCAAAGAT+TGG | + | chr2.4:7487331-7487350 | MS.gene31256:intron | 30.0% | |
| GTTATCAGCATCACTTTAAT+AGG | + | chr2.4:7487175-7487194 | MS.gene31256:intron | 30.0% | |
| TAGTACTAGTTATGGAAATC+TGG | + | chr2.4:7486148-7486167 | MS.gene31256:CDS | 30.0% | |
| TAGTAGCATAACCAGTAAAA+GGG | - | chr2.4:7486184-7486203 | None:intergenic | 30.0% | |
| TCCTTTGAATTCACTTAAGT+TGG | + | chr2.4:7487993-7488012 | MS.gene31256:intron | 30.0% | |
| TCTATACTGAAAATCCAAGA+TGG | + | chr2.4:7487108-7487127 | MS.gene31256:intron | 30.0% | |
| TTAACCTATTACACATATCC+CGG | - | chr2.4:7487373-7487392 | None:intergenic | 30.0% | |
| TTAAGTGAATTCAAAGGAGT+AGG | - | chr2.4:7487991-7488010 | None:intergenic | 30.0% | |
| ! | AAGAGGTATAAATTGGAATG+TGG | + | chr2.4:7488654-7488673 | MS.gene31256:CDS | 30.0% |
| ! | AGTGATAATGATAAGCTTTG+TGG | - | chr2.4:7485948-7485967 | None:intergenic | 30.0% |
| ! | GCTTATGTTTCTCATTTTGA+AGG | + | chr2.4:7485996-7486015 | MS.gene31256:CDS | 30.0% |
| ! | GTCAACTAGTTTAGTACTAT+TGG | - | chr2.4:7487602-7487621 | None:intergenic | 30.0% |
| ! | TAGAGAGAAGAGGTATAAAT+TGG | + | chr2.4:7488647-7488666 | MS.gene31256:CDS | 30.0% |
| ! | TAGTTTAGTACTATTGGTTG+TGG | - | chr2.4:7487596-7487615 | None:intergenic | 30.0% |
| ! | TCTTAAGTTGTCCATAACAA+TGG | + | chr2.4:7488072-7488091 | MS.gene31256:intron | 30.0% |
| ! | TTTTTGCCATATAGACATAG+TGG | + | chr2.4:7488711-7488730 | MS.gene31256:CDS | 30.0% |
| !! | AACTGAGTGATTTTGGAAAT+TGG | + | chr2.4:7485667-7485686 | MS.gene31256:CDS | 30.0% |
| !! | AATGATAAGCTTTGTGGTTT+TGG | - | chr2.4:7485942-7485961 | None:intergenic | 30.0% |
| !! | GTTGCACAAAATTTGTTAGA+TGG | + | chr2.4:7486230-7486249 | MS.gene31256:CDS | 30.0% |
| !! | TATGTTTCTCATTTTGAAGG+GGG | + | chr2.4:7485999-7486018 | MS.gene31256:CDS | 30.0% |
| !! | TTTCAGGTCTATTCTTTTGT+AGG | - | chr2.4:7487663-7487682 | None:intergenic | 30.0% |
| !!! | CCAACAGTGGAAATTTTTTA+GGG | - | chr2.4:7488120-7488139 | None:intergenic | 30.0% |
| !!! | GGCTTTTTGATTTGTTTGAT+TGG | + | chr2.4:7488014-7488033 | MS.gene31256:intron | 30.0% |
| AAACCATTTGCATCTGTTGA+TGG | - | chr2.4:7487414-7487433 | None:intergenic | 35.0% | |
| AAACTGAGGTTGCTTCTAAA+GGG | + | chr2.4:7486294-7486313 | MS.gene31256:CDS | 35.0% | |
| AAGAATGGATGGAACACTTA+TGG | + | chr2.4:7488686-7488705 | MS.gene31256:CDS | 35.0% | |
| AATGACTTTATGCTGTTGTG+TGG | + | chr2.4:7486544-7486563 | MS.gene31256:intron | 35.0% | |
| AGTAGCCAACACATGTTTAT+CGG | - | chr2.4:7487937-7487956 | None:intergenic | 35.0% | |
| AGTCCAAATGAGAGAACTTA+TGG | + | chr2.4:7488465-7488484 | MS.gene31256:CDS | 35.0% | |
| ATGCTTGACAAAAAAACAGC+AGG | + | chr2.4:7488426-7488445 | MS.gene31256:CDS | 35.0% | |
| ATGTGGAATGAGTTCAAGAA+TGG | + | chr2.4:7488671-7488690 | MS.gene31256:CDS | 35.0% | |
| ATGTGTACTTCTTCAACCAT+AGG | - | chr2.4:7488408-7488427 | None:intergenic | 35.0% | |
| ATTTGGACTGCAATTCTCAT+TGG | - | chr2.4:7488454-7488473 | None:intergenic | 35.0% | |
| CACAACAGCATAAAGTCATT+TGG | - | chr2.4:7486544-7486563 | None:intergenic | 35.0% | |
| CCCTAAAAAATTTCCACTGT+TGG | + | chr2.4:7488117-7488136 | MS.gene31256:intron | 35.0% | |
| CCTAATTCTTGATACTCCAA+AGG | - | chr2.4:7485573-7485592 | None:intergenic | 35.0% | |
| GAAAATGTATGTCACCTAGA+TGG | - | chr2.4:7486802-7486821 | None:intergenic | 35.0% | |
| GCCAACTTAAGTGAATTCAA+AGG | - | chr2.4:7487997-7488016 | None:intergenic | 35.0% | |
| GTAAATGAGTTAAATGAGGC+AGG | + | chr2.4:7488615-7488634 | MS.gene31256:CDS | 35.0% | |
| TCAAGTCTATCACTTCCAAT+AGG | + | chr2.4:7485835-7485854 | MS.gene31256:CDS | 35.0% | |
| TCATGTCCACTATGTCTATA+TGG | - | chr2.4:7488720-7488739 | None:intergenic | 35.0% | |
| TGTTGCATCATTAACCTACT+TGG | - | chr2.4:7485609-7485628 | None:intergenic | 35.0% | |
| TTCAATGCCTTATCCATTCT+AGG | - | chr2.4:7488516-7488535 | None:intergenic | 35.0% | |
| TTTCCATAACTAGTACTAGC+AGG | - | chr2.4:7486146-7486165 | None:intergenic | 35.0% | |
| ! | CAATCTCTAGAAATGATGGA+AGG | - | chr2.4:7486068-7486087 | None:intergenic | 35.0% |
| ! | CATTCAGAACTGAGTGATTT+TGG | + | chr2.4:7485660-7485679 | MS.gene31256:CDS | 35.0% |
| ! | CTGTTTTCGTCAACAGTTTA+AGG | + | chr2.4:7487001-7487020 | MS.gene31256:intron | 35.0% |
| ! | GCTTTATTCTGCTGATAATC+TGG | - | chr2.4:7486401-7486420 | None:intergenic | 35.0% |
| ! | GTATTGACAAATCATTTCGC+AGG | - | chr2.4:7487570-7487589 | None:intergenic | 35.0% |
| ! | TACTGCTACTTCAAATCCTT+TGG | + | chr2.4:7485554-7485573 | MS.gene31256:CDS | 35.0% |
| ! | TATGGTGCTGAAAAGCAATT+AGG | + | chr2.4:7485771-7485790 | MS.gene31256:CDS | 35.0% |
| ! | TCACATGTTGTCACCAATTT+TGG | - | chr2.4:7486266-7486285 | None:intergenic | 35.0% |
| ! | TCCACAATCTCTAGAAATGA+TGG | - | chr2.4:7486072-7486091 | None:intergenic | 35.0% |
| ! | TCCATCATTTCTAGAGATTG+TGG | + | chr2.4:7486068-7486087 | MS.gene31256:CDS | 35.0% |
| ! | TTAGTACTATTGGTTGTGGT+CGG | - | chr2.4:7487592-7487611 | None:intergenic | 35.0% |
| !! | AAATCACTCAGTTCTGAATG+AGG | - | chr2.4:7485660-7485679 | None:intergenic | 35.0% |
| !! | AATGTTTCCTAGTGCTGATT+GGG | + | chr2.4:7486343-7486362 | MS.gene31256:CDS | 35.0% |
| !! | ATGTGATGTTTCTGAAACTG+AGG | + | chr2.4:7486280-7486299 | MS.gene31256:CDS | 35.0% |
| !! | CCTTTGGAGTATCAAGAATT+AGG | + | chr2.4:7485570-7485589 | MS.gene31256:CDS | 35.0% |
| !! | TATTGATCAGTGAGTTGATG+TGG | - | chr2.4:7485711-7485730 | None:intergenic | 35.0% |
| !!! | GCCAACAGTGGAAATTTTTT+AGG | - | chr2.4:7488121-7488140 | None:intergenic | 35.0% |
| AACCCCTTGAAGCCTATAAA+TGG | + | chr2.4:7486752-7486771 | MS.gene31256:intron | 40.0% | |
| ACAACCTTTCCCCCATTTAT+AGG | - | chr2.4:7486767-7486786 | None:intergenic | 40.0% | |
| ACCCCTTGAAGCCTATAAAT+GGG | + | chr2.4:7486753-7486772 | MS.gene31256:intron | 40.0% | |
| AGACACCGATAAACATGTGT+TGG | + | chr2.4:7487929-7487948 | MS.gene31256:CDS | 40.0% | |
| AGTCCTGCTAGTACTAGTTA+TGG | + | chr2.4:7486140-7486159 | MS.gene31256:CDS | 40.0% | |
| AGTTAAATGAGGCAGGACAA+TGG | + | chr2.4:7488622-7488641 | MS.gene31256:CDS | 40.0% | |
| ATCATCACATCAAGACTTGG+TGG | + | chr2.4:7486094-7486113 | MS.gene31256:CDS | 40.0% | |
| ATCCACAACAACAGCATGTT+TGG | + | chr2.4:7487704-7487723 | MS.gene31256:CDS | 40.0% | |
| CAATAGGTCAGAGTCAGAAA+TGG | + | chr2.4:7485851-7485870 | MS.gene31256:CDS | 40.0% | |
| CATGATGTTGTGAGATCACT+TGG | + | chr2.4:7488735-7488754 | MS.gene31256:CDS | 40.0% | |
| CATTTCTGACTCTGACCTAT+TGG | - | chr2.4:7485853-7485872 | None:intergenic | 40.0% | |
| CTAGCAGGACTCTTTGAATT+AGG | - | chr2.4:7486131-7486150 | None:intergenic | 40.0% | |
| CTTTAATAGTCAAAGCCTGG+AGG | - | chr2.4:7487059-7487078 | None:intergenic | 40.0% | |
| GAAACTGAGGTTGCTTCTAA+AGG | + | chr2.4:7486293-7486312 | MS.gene31256:CDS | 40.0% | |
| GCTTATGTTCATGCAAGAAG+AGG | + | chr2.4:7486424-7486443 | MS.gene31256:CDS | 40.0% | |
| GGAATGAGTTCAAGAATGGA+TGG | + | chr2.4:7488675-7488694 | MS.gene31256:CDS | 40.0% | |
| GTACCATCAACAGATGCAAA+TGG | + | chr2.4:7487408-7487427 | MS.gene31256:CDS | 40.0% | |
| GTAGCTTAGGTGTTTCTTTG+CGG | + | chr2.4:7486375-7486394 | MS.gene31256:CDS | 40.0% | |
| GTCATTTGAAAGGTCCATCT+AGG | + | chr2.4:7486785-7486804 | MS.gene31256:intron | 40.0% | |
| GTGCCATAAGTTCTCTCATT+TGG | - | chr2.4:7488471-7488490 | None:intergenic | 40.0% | |
| TCATCCTTTGAATCAGTAGC+AGG | + | chr2.4:7487436-7487455 | MS.gene31256:CDS | 40.0% | |
| TGTGGATCATGAAAACCTGA+TGG | - | chr2.4:7487691-7487710 | None:intergenic | 40.0% | |
| TGTTGTGAGATCACTTGGAT+TGG | + | chr2.4:7488740-7488759 | MS.gene31256:CDS | 40.0% | |
| TTCAAAGCCAGACTGATGTA+AGG | - | chr2.4:7487478-7487497 | None:intergenic | 40.0% | |
| TTCGCAGGACTTCACTTATA+TGG | - | chr2.4:7487555-7487574 | None:intergenic | 40.0% | |
| TTTGCCGGGATATGTGTAAT+AGG | + | chr2.4:7487366-7487385 | MS.gene31256:intron | 40.0% | |
| ! | AAACCTGATGGAACCTTTTC+AGG | - | chr2.4:7487679-7487698 | None:intergenic | 40.0% |
| ! | ACATGTTTATCGGTGTCTGT+AGG | - | chr2.4:7487927-7487946 | None:intergenic | 40.0% |
| ! | AGAACTTATGGCACTGAAGT+GGG | + | chr2.4:7488477-7488496 | MS.gene31256:CDS | 40.0% |
| ! | CATGTTTATCGGTGTCTGTA+GGG | - | chr2.4:7487926-7487945 | None:intergenic | 40.0% |
| ! | GAGCTTTAATAGTCAAAGCC+TGG | - | chr2.4:7487062-7487081 | None:intergenic | 40.0% |
| ! | GGGAAAGGTTGTCATTTGAA+AGG | + | chr2.4:7486775-7486794 | MS.gene31256:intron | 40.0% |
| ! | TGGGTTTTGCTCTCCAAAAT+TGG | + | chr2.4:7486250-7486269 | MS.gene31256:CDS | 40.0% |
| ! | TTGATAGCACCACAGCAATT+GGG | + | chr2.4:7487085-7487104 | MS.gene31256:intron | 40.0% |
| ! | TTTGATAGCACCACAGCAAT+TGG | + | chr2.4:7487084-7487103 | MS.gene31256:intron | 40.0% |
| ! | TTTGGGCTCTAATTCCATCT+TGG | - | chr2.4:7487125-7487144 | None:intergenic | 40.0% |
| !! | AAGACCTGCTACTGATTCAA+AGG | - | chr2.4:7487443-7487462 | None:intergenic | 40.0% |
| !! | ATGTTTCCTAGTGCTGATTG+GGG | + | chr2.4:7486344-7486363 | MS.gene31256:CDS | 40.0% |
| !! | CAATGTTTCCTAGTGCTGAT+TGG | + | chr2.4:7486342-7486361 | MS.gene31256:CDS | 40.0% |
| !!! | TGGTTTTGACACTGTTTTGC+CGG | + | chr2.4:7487351-7487370 | MS.gene31256:intron | 40.0% |
| AATTTGTACCATGGACCTCC+AGG | + | chr2.4:7487041-7487060 | MS.gene31256:intron | 45.0% | |
| ACCATGAATTACTCGACGAG+GGG | - | chr2.4:7486976-7486995 | None:intergenic | 45.0% | |
| AGACCTGAAAAGGTTCCATC+AGG | + | chr2.4:7487673-7487692 | MS.gene31256:CDS | 45.0% | |
| AGCTACTCCTTACATCAGTC+TGG | + | chr2.4:7487468-7487487 | MS.gene31256:CDS | 45.0% | |
| ATGCCTTATCCATTCTAGGC+TGG | - | chr2.4:7488512-7488531 | None:intergenic | 45.0% | |
| CACAACAACAGCATGTTTGG+AGG | + | chr2.4:7487707-7487726 | MS.gene31256:CDS | 45.0% | |
| CACCATGAATTACTCGACGA+GGG | - | chr2.4:7486977-7486996 | None:intergenic | 45.0% | |
| CAGTATAGACCCAATTGCTG+TGG | - | chr2.4:7487097-7487116 | None:intergenic | 45.0% | |
| CCCCATTTATAGGCTTCAAG+GGG | - | chr2.4:7486757-7486776 | None:intergenic | 45.0% | |
| CCCCCATTTATAGGCTTCAA+GGG | - | chr2.4:7486758-7486777 | None:intergenic | 45.0% | |
| CCCCTTGAAGCCTATAAATG+GGG | + | chr2.4:7486754-7486773 | MS.gene31256:intron | 45.0% | |
| CCCTTGAAGCCTATAAATGG+GGG | + | chr2.4:7486755-7486774 | MS.gene31256:intron | 45.0% | |
| CTCCAAACATGCTGTTGTTG+TGG | - | chr2.4:7487709-7487728 | None:intergenic | 45.0% | |
| GAAGCCTATAAATGGGGGAA+AGG | + | chr2.4:7486760-7486779 | MS.gene31256:intron | 45.0% | |
| GACAATGGAGTAGAGAGAAG+AGG | + | chr2.4:7488637-7488656 | MS.gene31256:CDS | 45.0% | |
| GAGACAGAGAGACAAACGTA+CGG | - | chr2.4:7487802-7487821 | None:intergenic | 45.0% | |
| TAACCAGTAAAAGGGCCAAG+TGG | - | chr2.4:7486176-7486195 | None:intergenic | 45.0% | |
| TATGGAAATCTGGGTCCACT+TGG | + | chr2.4:7486158-7486177 | MS.gene31256:CDS | 45.0% | |
| TCACCATGAATTACTCGACG+AGG | - | chr2.4:7486978-7486997 | None:intergenic | 45.0% | |
| TCCCCCATTTATAGGCTTCA+AGG | - | chr2.4:7486759-7486778 | None:intergenic | 45.0% | |
| TTTATGGATCTGGCCAACAG+TGG | - | chr2.4:7488133-7488152 | None:intergenic | 45.0% | |
| ! | GAGAACTTATGGCACTGAAG+TGG | + | chr2.4:7488476-7488495 | MS.gene31256:CDS | 45.0% |
| ! | GGCTTTGATCCATGCATCTT+AGG | - | chr2.4:7487642-7487661 | None:intergenic | 45.0% |
| !! | CATGTGTTGGCTACTCAAAC+TGG | + | chr2.4:7487942-7487961 | MS.gene31256:CDS | 45.0% |
| !! | GGTTTTGACACTGTTTTGCC+GGG | + | chr2.4:7487352-7487371 | MS.gene31256:intron | 45.0% |
| !! | TCACATCAAGACTTGGTGGT+TGG | + | chr2.4:7486098-7486117 | MS.gene31256:CDS | 45.0% |
| !! | TGTTTCCTAGTGCTGATTGG+GGG | + | chr2.4:7486345-7486364 | MS.gene31256:CDS | 45.0% |
| !! | AAAAAAAAAAAAAAATCATA+AGG | + | chr2.4:7488151-7488170 | MS.gene31256:intron | 5.0% |
| !!! | AGTTTAATTATTATATTTTT+TGG | + | chr2.4:7487879-7487898 | MS.gene31256:intron | 5.0% |
| !!! | TGATTTTTTTTTTTTTTTTA+TGG | - | chr2.4:7488149-7488168 | None:intergenic | 5.0% |
| CAAAGGAGTAGGAACCTACC+TGG | - | chr2.4:7487980-7487999 | None:intergenic | 50.0% | |
| CAGCCAGCCTAGAATGGATA+AGG | + | chr2.4:7488506-7488525 | MS.gene31256:CDS | 50.0% | |
| GTGCAGCTTCAGAACCAAGT+AGG | + | chr2.4:7485592-7485611 | MS.gene31256:CDS | 50.0% | |
| TCCCCTCGTCGAGTAATTCA+TGG | + | chr2.4:7486972-7486991 | MS.gene31256:intron | 50.0% | |
| TCCTCATGCTCTCTAGTCTC+TGG | - | chr2.4:7486646-7486665 | None:intergenic | 50.0% | |
| TGGGGGAACAGAAGTAGCTT+AGG | + | chr2.4:7486362-7486381 | MS.gene31256:CDS | 50.0% | |
| TGTGGCAAGCCTAAGATGCA+TGG | + | chr2.4:7487630-7487649 | MS.gene31256:CDS | 50.0% | |
| TTAATGCTCGAGTTCGCGTG+TGG | + | chr2.4:7488379-7488398 | MS.gene31256:CDS | 50.0% | |
| TTCATGCAGCCAGCCTAGAA+TGG | + | chr2.4:7488500-7488519 | MS.gene31256:CDS | 50.0% | |
| ! | CAGTGGCGATTCTAAGAGCT+TGG | + | chr2.4:7487755-7487774 | MS.gene31256:CDS | 50.0% |
| ! | GCTGTTGTGTGGACTGCAAA+AGG | + | chr2.4:7486555-7486574 | MS.gene31256:intron | 50.0% |
| ! | TCCAGAGACTAGAGAGCATG+AGG | + | chr2.4:7486642-7486661 | MS.gene31256:intron | 50.0% |
| !! | AACTGGTCTTTCGCGAAACC+AGG | + | chr2.4:7487959-7487978 | MS.gene31256:CDS | 50.0% |
| !! | TCAGTGAGTTGATGTGGAGC+AGG | - | chr2.4:7485705-7485724 | None:intergenic | 50.0% |
| AGAATCGCCACTGCACGTTC+TGG | - | chr2.4:7487748-7487767 | None:intergenic | 55.0% | |
| AGGCTTTCCAGAACGTGCAG+TGG | + | chr2.4:7487738-7487757 | MS.gene31256:CDS | 55.0% | |
| AGTCAAAGCCTGGAGGTCCA+TGG | - | chr2.4:7487052-7487071 | None:intergenic | 55.0% | |
| AGTTCGCGTGTGGAAGCCTA+TGG | + | chr2.4:7488389-7488408 | MS.gene31256:CDS | 55.0% | |
| CATGTTTGGAGGCCTCAGAG+AGG | + | chr2.4:7487718-7487737 | MS.gene31256:CDS | 55.0% | |
| CTGTTCCCCCAATCAGCACT+AGG | - | chr2.4:7486353-7486372 | None:intergenic | 55.0% | |
| GGTCTTTCGCGAAACCAGGT+AGG | + | chr2.4:7487963-7487982 | MS.gene31256:intron | 55.0% | |
| ! | GGTCCACTTGGCCCTTTTAC+TGG | + | chr2.4:7486170-7486189 | MS.gene31256:CDS | 55.0% |
| !! | CGTTCTGGAAAGCCTCTCTG+AGG | - | chr2.4:7487733-7487752 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 7485459 | 7488776 | 7485459 | ID=MS.gene31256 |
| chr2.4 | mRNA | 7485459 | 7488776 | 7485459 | ID=MS.gene31256.t1;Parent=MS.gene31256 |
| chr2.4 | exon | 7485459 | 7486445 | 7485459 | ID=MS.gene31256.t1.exon1;Parent=MS.gene31256.t1 |
| chr2.4 | CDS | 7485459 | 7486445 | 7485459 | ID=cds.MS.gene31256.t1;Parent=MS.gene31256.t1 |
| chr2.4 | exon | 7487388 | 7487800 | 7487388 | ID=MS.gene31256.t1.exon2;Parent=MS.gene31256.t1 |
| chr2.4 | CDS | 7487388 | 7487800 | 7487388 | ID=cds.MS.gene31256.t1;Parent=MS.gene31256.t1 |
| chr2.4 | exon | 7487920 | 7487980 | 7487920 | ID=MS.gene31256.t1.exon3;Parent=MS.gene31256.t1 |
| chr2.4 | CDS | 7487920 | 7487980 | 7487920 | ID=cds.MS.gene31256.t1;Parent=MS.gene31256.t1 |
| chr2.4 | exon | 7488363 | 7488776 | 7488363 | ID=MS.gene31256.t1.exon4;Parent=MS.gene31256.t1 |
| chr2.4 | CDS | 7488363 | 7488776 | 7488363 | ID=cds.MS.gene31256.t1;Parent=MS.gene31256.t1 |
| Gene Sequence |
| Protein sequence |