Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058918.t1 | KEH39362.1 | 94.1 | 624 | 28 | 4 | 1 | 623 | 1 | 616 | 0.00E+00 | 1127.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058918.t1 | Q9SJJ3 | 42.6 | 378 | 159 | 8 | 176 | 525 | 165 | 512 | 7.0e-65 | 250.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058918.t1 | A0A072VC89 | 94.1 | 624 | 28 | 4 | 1 | 623 | 1 | 616 | 0.0e+00 | 1127.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene058918.t1 | TF | HB-BELL |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050563 | MS.gene058918 | 0.810682 | 1.02E-50 | -1.69E-46 |
MS.gene053383 | MS.gene058918 | 0.842028 | 3.32E-58 | -1.69E-46 |
MS.gene05456 | MS.gene058918 | 0.807428 | 5.08E-50 | -1.69E-46 |
MS.gene055359 | MS.gene058918 | 0.823494 | 1.34E-53 | -1.69E-46 |
MS.gene058918 | MS.gene061337 | 0.80888 | 2.49E-50 | -1.69E-46 |
MS.gene058918 | MS.gene063566 | 0.836621 | 8.41E-57 | -1.69E-46 |
MS.gene058918 | MS.gene069330 | 0.830897 | 2.27E-55 | -1.69E-46 |
MS.gene058918 | MS.gene070489 | 0.821021 | 5.04E-53 | -1.69E-46 |
MS.gene058918 | MS.gene09437 | 0.807441 | 5.05E-50 | -1.69E-46 |
MS.gene058918 | MS.gene22109 | 0.836832 | 7.42E-57 | -1.69E-46 |
MS.gene058918 | MS.gene22900 | 0.835444 | 1.67E-56 | -1.69E-46 |
MS.gene058918 | MS.gene28281 | 0.809203 | 2.13E-50 | -1.69E-46 |
MS.gene058918 | MS.gene31256 | 0.867754 | 1.08E-65 | -1.69E-46 |
MS.gene058918 | MS.gene37909 | 0.836905 | 7.11E-57 | -1.69E-46 |
MS.gene058918 | MS.gene53275 | 0.806962 | 6.38E-50 | -1.69E-46 |
MS.gene058918 | MS.gene54035 | 0.847798 | 9.21E-60 | -1.69E-46 |
MS.gene058918 | MS.gene60245 | 0.859326 | 4.47E-63 | -1.69E-46 |
MS.gene058918 | MS.gene61665 | 0.850995 | 1.18E-60 | -1.69E-46 |
MS.gene058918 | MS.gene62049 | 0.843539 | 1.32E-58 | -1.69E-46 |
MS.gene058918 | MS.gene65481 | 0.829759 | 4.30E-55 | -1.69E-46 |
MS.gene058918 | MS.gene68922 | 0.819549 | 1.10E-52 | -1.69E-46 |
MS.gene058918 | MS.gene69587 | 0.826896 | 2.11E-54 | -1.69E-46 |
MS.gene058918 | MS.gene73229 | 0.800778 | 1.23E-48 | -1.69E-46 |
MS.gene058918 | MS.gene76705 | 0.806499 | 7.99E-50 | -1.69E-46 |
MS.gene058918 | MS.gene81601 | 0.820535 | 6.52E-53 | -1.69E-46 |
MS.gene058918 | MS.gene91805 | 0.818912 | 1.53E-52 | -1.69E-46 |
MS.gene058918 | MS.gene92551 | 0.831101 | 2.02E-55 | -1.69E-46 |
MS.gene058918 | MS.gene98787 | 0.804419 | 2.18E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058918.t1 | MTR_2g095050 | 94.071 | 624 | 28 | 4 | 1 | 623 | 1 | 616 | 0.0 | 1157 |
MS.gene058918.t1 | MTR_7g065050 | 47.482 | 278 | 122 | 5 | 235 | 512 | 124 | 377 | 6.78e-77 | 254 |
MS.gene058918.t1 | MTR_4g019450 | 48.780 | 287 | 110 | 6 | 241 | 520 | 189 | 445 | 1.44e-74 | 250 |
MS.gene058918.t1 | MTR_8g078480 | 43.525 | 278 | 139 | 5 | 244 | 514 | 384 | 650 | 1.98e-64 | 227 |
MS.gene058918.t1 | MTR_1g057790 | 44.061 | 261 | 127 | 4 | 247 | 501 | 160 | 407 | 5.87e-61 | 214 |
MS.gene058918.t1 | MTR_8g098815 | 45.420 | 262 | 123 | 6 | 248 | 503 | 185 | 432 | 1.85e-60 | 213 |
MS.gene058918.t1 | MTR_5g018860 | 42.336 | 274 | 136 | 6 | 244 | 507 | 330 | 591 | 3.48e-60 | 214 |
MS.gene058918.t1 | MTR_7g106320 | 47.788 | 226 | 97 | 4 | 302 | 524 | 232 | 439 | 1.82e-59 | 211 |
MS.gene058918.t1 | MTR_3g112300 | 39.604 | 303 | 120 | 7 | 244 | 520 | 158 | 423 | 1.43e-58 | 205 |
MS.gene058918.t1 | MTR_1g023050 | 42.958 | 284 | 125 | 6 | 252 | 521 | 174 | 434 | 1.85e-58 | 207 |
MS.gene058918.t1 | MTR_3g112300 | 39.604 | 303 | 120 | 7 | 244 | 520 | 158 | 423 | 4.46e-58 | 205 |
MS.gene058918.t1 | MTR_4g051532 | 40.446 | 314 | 159 | 7 | 248 | 554 | 217 | 509 | 6.28e-58 | 207 |
MS.gene058918.t1 | MTR_3g112290 | 38.889 | 306 | 143 | 8 | 230 | 522 | 154 | 428 | 3.85e-55 | 194 |
MS.gene058918.t1 | MTR_3g112300 | 38.039 | 255 | 127 | 4 | 244 | 487 | 158 | 392 | 1.63e-43 | 160 |
MS.gene058918.t1 | MTR_1g016490 | 35.577 | 208 | 114 | 4 | 312 | 518 | 315 | 503 | 4.04e-34 | 137 |
MS.gene058918.t1 | MTR_3g112300 | 34.940 | 249 | 101 | 6 | 244 | 466 | 158 | 371 | 2.65e-33 | 131 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058918.t1 | AT2G27990 | 50.676 | 296 | 105 | 6 | 237 | 525 | 251 | 512 | 1.77e-82 | 271 |
MS.gene058918.t1 | AT5G02030 | 46.974 | 347 | 137 | 12 | 185 | 510 | 98 | 418 | 9.46e-73 | 244 |
MS.gene058918.t1 | AT4G34610 | 44.966 | 298 | 136 | 8 | 249 | 542 | 141 | 414 | 4.70e-67 | 228 |
MS.gene058918.t1 | AT4G34610 | 44.966 | 298 | 136 | 8 | 249 | 542 | 141 | 414 | 4.70e-67 | 228 |
MS.gene058918.t1 | AT4G34610 | 44.966 | 298 | 136 | 8 | 249 | 542 | 141 | 414 | 4.70e-67 | 228 |
MS.gene058918.t1 | AT4G34610 | 44.966 | 298 | 136 | 8 | 249 | 542 | 141 | 414 | 4.70e-67 | 228 |
MS.gene058918.t1 | AT4G36870 | 45.489 | 266 | 127 | 5 | 248 | 507 | 312 | 565 | 1.26e-64 | 226 |
MS.gene058918.t1 | AT4G36870 | 45.489 | 266 | 127 | 5 | 248 | 507 | 312 | 565 | 1.26e-64 | 226 |
MS.gene058918.t1 | AT1G75410 | 38.793 | 348 | 190 | 7 | 168 | 507 | 81 | 413 | 2.41e-64 | 221 |
MS.gene058918.t1 | AT1G75410 | 38.793 | 348 | 190 | 7 | 168 | 507 | 81 | 413 | 2.41e-64 | 221 |
MS.gene058918.t1 | AT2G16400 | 40.972 | 288 | 145 | 7 | 243 | 529 | 109 | 372 | 8.96e-62 | 213 |
MS.gene058918.t1 | AT2G23760 | 43.542 | 271 | 134 | 5 | 244 | 507 | 233 | 491 | 1.97e-61 | 215 |
MS.gene058918.t1 | AT2G23760 | 43.542 | 271 | 134 | 5 | 244 | 507 | 233 | 491 | 1.97e-61 | 215 |
MS.gene058918.t1 | AT2G23760 | 43.542 | 271 | 134 | 5 | 244 | 507 | 233 | 491 | 1.97e-61 | 215 |
MS.gene058918.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene058918.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene058918.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene058918.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene058918.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene058918.t1 | AT2G35940 | 44.906 | 265 | 126 | 3 | 249 | 501 | 190 | 446 | 1.23e-59 | 211 |
MS.gene058918.t1 | AT2G35940 | 44.906 | 265 | 126 | 3 | 249 | 501 | 190 | 446 | 1.23e-59 | 211 |
MS.gene058918.t1 | AT2G35940 | 44.906 | 265 | 126 | 3 | 249 | 501 | 190 | 446 | 1.23e-59 | 211 |
MS.gene058918.t1 | AT2G27220 | 38.255 | 298 | 135 | 6 | 240 | 537 | 73 | 321 | 1.21e-52 | 187 |
MS.gene058918.t1 | AT2G27220 | 38.255 | 298 | 135 | 6 | 240 | 537 | 73 | 321 | 1.21e-52 | 187 |
MS.gene058918.t1 | AT2G23760 | 36.533 | 323 | 134 | 6 | 244 | 507 | 233 | 543 | 7.11e-52 | 190 |
MS.gene058918.t1 | AT5G41410 | 38.768 | 276 | 141 | 5 | 249 | 507 | 194 | 458 | 8.49e-52 | 189 |
MS.gene058918.t1 | AT4G36870 | 42.510 | 247 | 124 | 5 | 248 | 488 | 312 | 546 | 2.83e-51 | 186 |
MS.gene058918.t1 | AT2G27990 | 46.154 | 234 | 88 | 4 | 237 | 466 | 251 | 450 | 9.89e-51 | 182 |
MS.gene058918.t1 | AT1G75410 | 36.585 | 328 | 185 | 7 | 168 | 487 | 81 | 393 | 1.41e-50 | 180 |
MS.gene058918.t1 | AT4G36870 | 42.041 | 245 | 124 | 5 | 248 | 486 | 312 | 544 | 5.53e-50 | 182 |
MS.gene058918.t1 | AT1G75430 | 46.354 | 192 | 85 | 4 | 321 | 507 | 91 | 269 | 6.06e-50 | 175 |
MS.gene058918.t1 | AT2G27220 | 36.392 | 316 | 134 | 7 | 240 | 537 | 73 | 339 | 4.84e-49 | 177 |
MS.gene058918.t1 | AT4G32980 | 31.206 | 282 | 169 | 6 | 244 | 523 | 197 | 455 | 2.83e-37 | 145 |
MS.gene058918.t1 | AT4G32980 | 31.206 | 282 | 169 | 6 | 244 | 523 | 197 | 455 | 2.83e-37 | 145 |
MS.gene058918.t1 | AT1G75430 | 38.816 | 152 | 75 | 4 | 320 | 466 | 90 | 228 | 9.08e-25 | 105 |
Find 110 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCTGAACTGAGTGATTT+TGG | 0.076755 | 2.2:+6538450 | MS.gene058918:CDS |
TCACATGTTGTCGCCAATTT+TGG | 0.142956 | 2.2:-6539050 | None:intergenic |
TAAGAGTTCAAGATTCTTAA+AGG | 0.151069 | 2.2:+6538995 | MS.gene058918:CDS |
AATTCTCTTTCTTATGTATA+TGG | 0.222196 | 2.2:+6538543 | MS.gene058918:CDS |
TAGAGAGAAGAGGTATAAAT+TGG | 0.239051 | 2.2:+6541451 | MS.gene058918:CDS |
AATGATAAGCTTTGTGGTTT+TGG | 0.247497 | 2.2:-6538729 | None:intergenic |
GAGGCCTCAGAGAGGCTTTC+CGG | 0.248276 | 2.2:+6540538 | MS.gene058918:CDS |
CTAGCAGGACTCTTTGAATT+AGG | 0.255997 | 2.2:-6538915 | None:intergenic |
TTCGCAGGACTTCACTTATA+TGG | 0.258775 | 2.2:-6540364 | None:intergenic |
TTCAATGCCTTATCCATTCT+AGG | 0.259330 | 2.2:-6541317 | None:intergenic |
ATAGTAGCATAACCAGTAAA+AGG | 0.261980 | 2.2:-6538969 | None:intergenic |
GCTTTATTCTGCTGATAATC+TGG | 0.263343 | 2.2:-6539185 | None:intergenic |
GTTGCACAAAATTTGTTAGA+TGG | 0.282371 | 2.2:+6539017 | MS.gene058918:CDS |
GTCAACTAGTTTAGAACTAT+TGG | 0.285954 | 2.2:-6540411 | None:intergenic |
GTGCCATAAGTTCTCTCATT+TGG | 0.291427 | 2.2:-6541272 | None:intergenic |
GATTTGAAATAGCATTATTT+AGG | 0.301108 | 2.2:-6540334 | None:intergenic |
GATTAATGCAGGTATCAAAT+TGG | 0.308082 | 2.2:+6541156 | MS.gene058918:intron |
TAGTACTAGTTATGGAAATC+TGG | 0.321419 | 2.2:+6538935 | MS.gene058918:CDS |
AAGAATGGATGGAACACTTA+TGG | 0.325450 | 2.2:+6541490 | MS.gene058918:CDS |
CATTTCTGACTCTGACCTAT+TGG | 0.330237 | 2.2:-6538640 | None:intergenic |
AAACCATTTGCATCTGTTGA+TGG | 0.333209 | 2.2:-6540223 | None:intergenic |
AGTAGCCAACACATGTTTAT+CGG | 0.338043 | 2.2:-6540746 | None:intergenic |
ATCCACAACAACAGCATGTT+TGG | 0.346556 | 2.2:+6540516 | MS.gene058918:CDS |
AATGTTTCCTAGTGCTGATT+GGG | 0.352550 | 2.2:+6539130 | MS.gene058918:CDS |
GGCTTTGATCCATGCATCTT+AGG | 0.352803 | 2.2:-6540451 | None:intergenic |
TATGGTGGTGAAAAGCAATT+AGG | 0.353455 | 2.2:+6538561 | MS.gene058918:CDS |
TCATGTCCACTATGTCTATA+TGG | 0.356435 | 2.2:-6541521 | None:intergenic |
CAATGTTTCCTAGTGCTGAT+TGG | 0.357408 | 2.2:+6539129 | MS.gene058918:CDS |
ATTTCTGTTGATGAATAAAC+TGG | 0.361530 | 2.2:-6538306 | None:intergenic |
ATCAACTCACTGATCAATAT+TGG | 0.368498 | 2.2:+6538502 | MS.gene058918:CDS |
GAATCAGAATAATTCTTTGC+AGG | 0.380802 | 2.2:+6538596 | MS.gene058918:CDS |
AGAATCGCCACTGCACGTTC+CGG | 0.392563 | 2.2:-6540557 | None:intergenic |
CATGTGTTGGCTACTCAAAC+TGG | 0.395238 | 2.2:+6540754 | MS.gene058918:CDS |
AGTCCAAATGAGAGAACTTA+TGG | 0.398547 | 2.2:+6541269 | MS.gene058918:CDS |
ATTTGGACTGCAATTCTCAT+TGG | 0.400633 | 2.2:-6541255 | None:intergenic |
AGTCCTGCTAGTACTAGTTA+TGG | 0.414886 | 2.2:+6538927 | MS.gene058918:CDS |
CAAATTCAATGTATGGAACT+TGG | 0.416249 | 2.2:+6541371 | MS.gene058918:CDS |
TCCACAATCTCTAGAAATGA+TGG | 0.429326 | 2.2:-6538859 | None:intergenic |
TGTTGCATCATTAACCTACT+TGG | 0.429908 | 2.2:-6538396 | None:intergenic |
TGAAAATCAAATTCAATGTA+TGG | 0.431807 | 2.2:+6541364 | MS.gene058918:CDS |
TTGCACAAAATTTGTTAGAT+GGG | 0.442823 | 2.2:+6539018 | MS.gene058918:CDS |
ACAAAAGAATAGACCTGAAA+AGG | 0.450106 | 2.2:+6540475 | MS.gene058918:CDS |
CCTAGTTCTTGATACTCAAA+AGG | 0.452958 | 2.2:-6538360 | None:intergenic |
CATGATGTTGTGAGATCACT+TGG | 0.453466 | 2.2:+6541539 | MS.gene058918:CDS |
GAAACTGAGGTTGCTTCTAA+AGG | 0.458889 | 2.2:+6539080 | MS.gene058918:CDS |
TCCATCATTTCTAGAGATTG+TGG | 0.465297 | 2.2:+6538858 | MS.gene058918:CDS |
AGCTACTCCTTACATCAGTC+TGG | 0.473021 | 2.2:+6540280 | MS.gene058918:CDS |
ATGCCTTATCCATTCTAGGC+TGG | 0.476270 | 2.2:-6541313 | None:intergenic |
AAACTGAGGTTGCTTCTAAA+GGG | 0.476654 | 2.2:+6539081 | MS.gene058918:CDS |
CAGCCAGCCTAGAATGGATA+AGG | 0.478775 | 2.2:+6541310 | MS.gene058918:CDS |
GAGAACTTATGGCACTGAAG+TGG | 0.480355 | 2.2:+6541280 | MS.gene058918:CDS |
AGACCTGAAAAGGTTCCATC+AGG | 0.481595 | 2.2:+6540485 | MS.gene058918:CDS |
GTAGCTTAGGTGTTTCTTTG+CGG | 0.484731 | 2.2:+6539162 | MS.gene058918:CDS |
CAATAGGTCAGAGTCAGAAA+TGG | 0.486499 | 2.2:+6538641 | MS.gene058918:CDS |
AGTGATAATGATAAGCTTTG+TGG | 0.494435 | 2.2:-6538735 | None:intergenic |
TTCATGCAGCCAGCCTAGAA+TGG | 0.494640 | 2.2:+6541304 | MS.gene058918:CDS |
TCAAGTCTATCACTTCCAAT+AGG | 0.496873 | 2.2:+6538625 | MS.gene058918:CDS |
AACTGGTCTTTCGCGAAACC+AGG | 0.498308 | 2.2:+6540771 | MS.gene058918:CDS |
TCATCCTTCGAATCAGTAGC+AGG | 0.501543 | 2.2:+6540248 | MS.gene058918:CDS |
CATGTTTATCGGTGTCTGTA+GGG | 0.506317 | 2.2:-6540735 | None:intergenic |
GTAAATGAGTTAAATGAGGC+AGG | 0.508118 | 2.2:+6541419 | MS.gene058918:CDS |
AATAGTCAAGGAATTTGTGT+TGG | 0.508836 | 2.2:+6538681 | MS.gene058918:CDS |
TAGTAGCATAACCAGTAAAA+GGG | 0.510354 | 2.2:-6538968 | None:intergenic |
AGTTCGCGTGTGGAAGCCTA+TGG | 0.514217 | 2.2:+6541193 | MS.gene058918:CDS |
AGTACTAGTTATGGAAATCT+GGG | 0.524187 | 2.2:+6538936 | MS.gene058918:CDS |
CAGTGGCGATTCTAAGAGCT+TGG | 0.530709 | 2.2:+6540567 | MS.gene058918:CDS |
GTATTCCAACCACCAAGTCT+TGG | 0.532039 | 2.2:-6538893 | None:intergenic |
ACATGTTTATCGGTGTCTGT+AGG | 0.537212 | 2.2:-6540736 | None:intergenic |
ATGTGTACTTCTTCAACCAT+AGG | 0.539006 | 2.2:-6541209 | None:intergenic |
AGAACTTATGGCACTGAAGT+GGG | 0.539197 | 2.2:+6541281 | MS.gene058918:CDS |
TGTTGTGAGATCACTTGGAT+TGG | 0.539982 | 2.2:+6541544 | MS.gene058918:CDS |
ATCATCACACCAAGACTTGG+TGG | 0.541486 | 2.2:+6538884 | MS.gene058918:CDS |
ATGTGGAATGAGTTCAAGAA+TGG | 0.547007 | 2.2:+6541475 | MS.gene058918:CDS |
GCTTATGTTCATGCAAGAAG+AGG | 0.548768 | 2.2:+6539211 | MS.gene058918:CDS |
TAGTTTAGAACTATTGGTTG+TGG | 0.549653 | 2.2:-6540405 | None:intergenic |
TTCAAAGCCAGACTGATGTA+AGG | 0.549663 | 2.2:-6540287 | None:intergenic |
TCTCTTTCTTATGTATATGG+TGG | 0.551473 | 2.2:+6538546 | MS.gene058918:CDS |
TATGGAAATCTGGGTCCACT+TGG | 0.554507 | 2.2:+6538945 | MS.gene058918:CDS |
GTATTGACAAATCATTTCGC+AGG | 0.555399 | 2.2:-6540379 | None:intergenic |
CACAACAACAGCATGTTTGG+AGG | 0.557669 | 2.2:+6540519 | MS.gene058918:CDS |
AAATCACTCAGTTCAGAATG+AGG | 0.558152 | 2.2:-6538447 | None:intergenic |
AAAATCATCACACCAAGACT+TGG | 0.561583 | 2.2:+6538881 | MS.gene058918:CDS |
GTACCATCAACAGATGCAAA+TGG | 0.563901 | 2.2:+6540220 | MS.gene058918:CDS |
AAGAGGTATAAATTGGAATG+TGG | 0.564061 | 2.2:+6541458 | MS.gene058918:CDS |
TCACACCAAGACTTGGTGGT+TGG | 0.564779 | 2.2:+6538888 | MS.gene058918:CDS |
TTTCCATAACTAGTACTAGC+AGG | 0.567280 | 2.2:-6538930 | None:intergenic |
TTAGAACTATTGGTTGTGGT+CGG | 0.571655 | 2.2:-6540401 | None:intergenic |
AGGCTTTCCGGAACGTGCAG+TGG | 0.573018 | 2.2:+6540550 | MS.gene058918:CDS |
CTCCAAACATGCTGTTGTTG+TGG | 0.578756 | 2.2:-6540518 | None:intergenic |
ATGTTTCCTAGTGCTGATTG+GGG | 0.585973 | 2.2:+6539131 | MS.gene058918:CDS |
AGACACCGATAAACATGTGT+TGG | 0.590173 | 2.2:+6540741 | MS.gene058918:CDS |
AAGACCTGCTACTGATTCGA+AGG | 0.594942 | 2.2:-6540252 | None:intergenic |
AGTTAAATGAGGCAGGACAA+TGG | 0.596972 | 2.2:+6541426 | MS.gene058918:CDS |
TGTGGCAAGCCTAAGATGCA+TGG | 0.598137 | 2.2:+6540442 | MS.gene058918:CDS |
AGAAGTAAATGAGTTAAATG+AGG | 0.599304 | 2.2:+6541415 | MS.gene058918:CDS |
CTTATGCATCATAATAGTCA+AGG | 0.601239 | 2.2:+6538669 | MS.gene058918:CDS |
TTAATGCTCGAGTTCGCGTG+TGG | 0.602257 | 2.2:+6541183 | MS.gene058918:CDS |
GGAATGAGTTCAAGAATGGA+TGG | 0.604592 | 2.2:+6541479 | MS.gene058918:CDS |
TAATAATATTACACAAAACA+AGG | 0.606372 | 2.2:+6538764 | MS.gene058918:CDS |
ACTAGTTGACACTAATAATG+TGG | 0.612366 | 2.2:+6540424 | MS.gene058918:CDS |
TATTGATCAGTGAGTTGATG+TGG | 0.613925 | 2.2:-6538498 | None:intergenic |
GACAATGGAGTAGAGAGAAG+AGG | 0.622784 | 2.2:+6541441 | MS.gene058918:CDS |
ATGTGATGTTTCTGAAACTG+AGG | 0.624579 | 2.2:+6539067 | MS.gene058918:CDS |
TGTGGATCATGAAAACCTGA+TGG | 0.624654 | 2.2:-6540500 | None:intergenic |
GTGCAGCTTCAGAACCAAGT+AGG | 0.625967 | 2.2:+6538382 | MS.gene058918:CDS |
CAATCTCTAGAAATGATGGA+AGG | 0.631862 | 2.2:-6538855 | None:intergenic |
TAACCAGTAAAAGGGCCAAG+TGG | 0.664374 | 2.2:-6538960 | None:intergenic |
CGTTCCGGAAAGCCTCTCTG+AGG | 0.668109 | 2.2:-6540542 | None:intergenic |
TGTTTCCTAGTGCTGATTGG+GGG | 0.672245 | 2.2:+6539132 | MS.gene058918:CDS |
CATGTTTGGAGGCCTCAGAG+AGG | 0.725435 | 2.2:+6540530 | MS.gene058918:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTTAAAACAAAAATTTAAA+AGG | - | chr2.2:6540997-6541016 | None:intergenic | 10.0% |
!! | TAAATAATTAAGTGTATTAT+AGG | - | chr2.2:6541084-6541103 | None:intergenic | 10.0% |
!! | AAATTTAAAAGGAATGAAAT+TGG | - | chr2.2:6540986-6541005 | None:intergenic | 15.0% |
!! | AATATAAAAAATTTGTACCA+TGG | + | chr2.2:6539843-6539862 | MS.gene058918:intron | 15.0% |
!! | AATTGCAAAGATAAATAAAT+TGG | + | chr2.2:6539417-6539436 | MS.gene058918:intron | 15.0% |
!! | ATCCATAAAAAAAAATCATA+AGG | + | chr2.2:6540955-6540974 | MS.gene058918:intron | 15.0% |
!! | TAATAATATTACACAAAACA+AGG | + | chr2.2:6538764-6538783 | MS.gene058918:CDS | 15.0% |
!! | TATCTCTACAAATAATTATA+TGG | + | chr2.2:6539690-6539709 | MS.gene058918:intron | 15.0% |
!!! | TAAAGTCAAAGTAATTTTAT+TGG | + | chr2.2:6540060-6540079 | MS.gene058918:intron | 15.0% |
!! | AATTCTCTTTCTTATGTATA+TGG | + | chr2.2:6538543-6538562 | MS.gene058918:CDS | 20.0% |
!! | ATAAAATTTGTATACACTGT+TGG | + | chr2.2:6539735-6539754 | MS.gene058918:intron | 20.0% |
!! | ATGTTTATCTGATGAATTAA+TGG | + | chr2.2:6541119-6541138 | MS.gene058918:intron | 20.0% |
!! | CTCAAGAATCAAATAAAATT+AGG | - | chr2.2:6540092-6540111 | None:intergenic | 20.0% |
!! | TGAAAATCAAATTCAATGTA+TGG | + | chr2.2:6541364-6541383 | MS.gene058918:CDS | 20.0% |
!! | TTAAGTGTATTATAGGAAAA+CGG | - | chr2.2:6541077-6541096 | None:intergenic | 20.0% |
!! | TTAATTCATCAGATAAACAT+AGG | - | chr2.2:6541119-6541138 | None:intergenic | 20.0% |
!!! | ATACATTGAATTTGATTTTC+AGG | - | chr2.2:6541365-6541384 | None:intergenic | 20.0% |
!!! | ATGATTTTTTTTTATGGATC+TGG | - | chr2.2:6540954-6540973 | None:intergenic | 20.0% |
!!! | ATTTTTCTTCATATCACAAT+TGG | + | chr2.2:6539636-6539655 | MS.gene058918:intron | 20.0% |
!!! | CACCTTATGATTTTTTTTTA+TGG | - | chr2.2:6540960-6540979 | None:intergenic | 20.0% |
!!! | GATTTGAAATAGCATTATTT+AGG | - | chr2.2:6540337-6540356 | None:intergenic | 20.0% |
!!! | TCAATAGATTTTGTTACTTT+TGG | + | chr2.2:6541039-6541058 | MS.gene058918:intron | 20.0% |
!!! | TTTCTATGTGTTATTTGTTA+AGG | + | chr2.2:6540659-6540678 | MS.gene058918:intron | 20.0% |
!!! | TTTTAATTGTCTTCAAAGAT+TGG | + | chr2.2:6540141-6540160 | MS.gene058918:intron | 20.0% |
! | AATTTGATACCTGCATTAAT+CGG | - | chr2.2:6541157-6541176 | None:intergenic | 25.0% |
! | AGAAGTAAATGAGTTAAATG+AGG | + | chr2.2:6541415-6541434 | MS.gene058918:CDS | 25.0% |
! | TAAGAGTTCAAGATTCTTAA+AGG | + | chr2.2:6538995-6539014 | MS.gene058918:CDS | 25.0% |
! | TTCCAATCAAACAAATCAAA+AGG | - | chr2.2:6540831-6540850 | None:intergenic | 25.0% |
!! | AAAGTATTTGACCATTGTTA+TGG | - | chr2.2:6540898-6540917 | None:intergenic | 25.0% |
!! | ATGATCTGTTAGATCATTTT+GGG | - | chr2.2:6539953-6539972 | None:intergenic | 25.0% |
!! | ATTTCTGTTGATGAATAAAC+TGG | - | chr2.2:6538309-6538328 | None:intergenic | 25.0% |
!! | CTTATGTTTCTCATTTTGAA+GGG | + | chr2.2:6538787-6538806 | MS.gene058918:CDS | 25.0% |
!! | TACAGTAACTTGTAAGAAAA+AGG | + | chr2.2:6539329-6539348 | MS.gene058918:intron | 25.0% |
!! | TATGATCTGTTAGATCATTT+TGG | - | chr2.2:6539954-6539973 | None:intergenic | 25.0% |
!!! | CTCTTATTTGTTTTGAAACT+TGG | + | chr2.2:6540019-6540038 | MS.gene058918:intron | 25.0% |
!!! | GCAAGTTTTAATTTCTGAAA+AGG | + | chr2.2:6539391-6539410 | MS.gene058918:intron | 25.0% |
!!! | TATTGATTTTCTTAGTATGC+AGG | - | chr2.2:6541025-6541044 | None:intergenic | 25.0% |
!!! | TTATGTTTCTCATTTTGAAG+GGG | + | chr2.2:6538788-6538807 | MS.gene058918:CDS | 25.0% |
!!! | TTGCACAAAATTTGTTAGAT+GGG | + | chr2.2:6539018-6539037 | MS.gene058918:CDS | 25.0% |
AAACTATATCCGATTAATGC+AGG | + | chr2.2:6541145-6541164 | MS.gene058918:intron | 30.0% | |
AACCTATATTACACATATCC+CGG | - | chr2.2:6540183-6540202 | None:intergenic | 30.0% | |
AATAGTCAAGGAATTTGTGT+TGG | + | chr2.2:6538681-6538700 | MS.gene058918:CDS | 30.0% | |
AATTGTCTCAAGTATATGCA+AGG | - | chr2.2:6539493-6539512 | None:intergenic | 30.0% | |
ACAAAAGAATAGACCTGAAA+AGG | + | chr2.2:6540475-6540494 | MS.gene058918:CDS | 30.0% | |
ACTAGTTGACACTAATAATG+TGG | + | chr2.2:6540424-6540443 | MS.gene058918:CDS | 30.0% | |
AGTACTAGTTATGGAAATCT+GGG | + | chr2.2:6538936-6538955 | MS.gene058918:CDS | 30.0% | |
ATAGTAGCATAACCAGTAAA+AGG | - | chr2.2:6538972-6538991 | None:intergenic | 30.0% | |
ATCAACTCACTGATCAATAT+TGG | + | chr2.2:6538502-6538521 | MS.gene058918:CDS | 30.0% | |
CAAATTCAATGTATGGAACT+TGG | + | chr2.2:6541371-6541390 | MS.gene058918:CDS | 30.0% | |
CTTATGCATCATAATAGTCA+AGG | + | chr2.2:6538669-6538688 | MS.gene058918:CDS | 30.0% | |
GAATCAGAATAATTCTTTGC+AGG | + | chr2.2:6538596-6538615 | MS.gene058918:CDS | 30.0% | |
GAATTGTATATCGAGACATT+TGG | + | chr2.2:6540848-6540867 | MS.gene058918:intron | 30.0% | |
GATTAATGCAGGTATCAAAT+TGG | + | chr2.2:6541156-6541175 | MS.gene058918:intron | 30.0% | |
GTTATCAGCATCACTTTAAT+AGG | + | chr2.2:6539986-6540005 | MS.gene058918:intron | 30.0% | |
TAGTACTAGTTATGGAAATC+TGG | + | chr2.2:6538935-6538954 | MS.gene058918:CDS | 30.0% | |
TAGTAGCATAACCAGTAAAA+GGG | - | chr2.2:6538971-6538990 | None:intergenic | 30.0% | |
TCCTTTGAATTCACTTAAGT+TGG | + | chr2.2:6540805-6540824 | MS.gene058918:intron | 30.0% | |
TCTATACTGAAAATCCAAGA+TGG | + | chr2.2:6539919-6539938 | MS.gene058918:intron | 30.0% | |
TCTCTTTCTTATGTATATGG+TGG | + | chr2.2:6538546-6538565 | MS.gene058918:CDS | 30.0% | |
TTAAGTGAATTCAAAGGAGT+AGG | - | chr2.2:6540803-6540822 | None:intergenic | 30.0% | |
! | AAGAGGTATAAATTGGAATG+TGG | + | chr2.2:6541458-6541477 | MS.gene058918:CDS | 30.0% |
! | AGTGATAATGATAAGCTTTG+TGG | - | chr2.2:6538738-6538757 | None:intergenic | 30.0% |
! | GCTTATGTTTCTCATTTTGA+AGG | + | chr2.2:6538786-6538805 | MS.gene058918:CDS | 30.0% |
! | GTCAACTAGTTTAGAACTAT+TGG | - | chr2.2:6540414-6540433 | None:intergenic | 30.0% |
! | TAGAGAGAAGAGGTATAAAT+TGG | + | chr2.2:6541451-6541470 | MS.gene058918:CDS | 30.0% |
! | TAGTTTAGAACTATTGGTTG+TGG | - | chr2.2:6540408-6540427 | None:intergenic | 30.0% |
! | TCTTAAGTTGTCCATAACAA+TGG | + | chr2.2:6540884-6540903 | MS.gene058918:intron | 30.0% |
! | TTTTTGCCATATAGACATAG+TGG | + | chr2.2:6541515-6541534 | MS.gene058918:CDS | 30.0% |
!! | AACTGAGTGATTTTGGAAAT+TGG | + | chr2.2:6538457-6538476 | MS.gene058918:CDS | 30.0% |
!! | AATGATAAGCTTTGTGGTTT+TGG | - | chr2.2:6538732-6538751 | None:intergenic | 30.0% |
!! | GTTGCACAAAATTTGTTAGA+TGG | + | chr2.2:6539017-6539036 | MS.gene058918:CDS | 30.0% |
!! | TATGTTTCTCATTTTGAAGG+GGG | + | chr2.2:6538789-6538808 | MS.gene058918:CDS | 30.0% |
!! | TTTCAGGTCTATTCTTTTGT+AGG | - | chr2.2:6540475-6540494 | None:intergenic | 30.0% |
AAAATCATCACACCAAGACT+TGG | + | chr2.2:6538881-6538900 | MS.gene058918:CDS | 35.0% | |
AAACCATTTGCATCTGTTGA+TGG | - | chr2.2:6540226-6540245 | None:intergenic | 35.0% | |
AAACTGAGGTTGCTTCTAAA+GGG | + | chr2.2:6539081-6539100 | MS.gene058918:CDS | 35.0% | |
AAATCACTCAGTTCAGAATG+AGG | - | chr2.2:6538450-6538469 | None:intergenic | 35.0% | |
AAGAATGGATGGAACACTTA+TGG | + | chr2.2:6541490-6541509 | MS.gene058918:CDS | 35.0% | |
AATGACTTTATGCTGTTGTG+TGG | + | chr2.2:6539355-6539374 | MS.gene058918:intron | 35.0% | |
ACCCTAAAAATTTCCACTGT+TGG | + | chr2.2:6540928-6540947 | MS.gene058918:intron | 35.0% | |
AGTAGCCAACACATGTTTAT+CGG | - | chr2.2:6540749-6540768 | None:intergenic | 35.0% | |
AGTCCAAATGAGAGAACTTA+TGG | + | chr2.2:6541269-6541288 | MS.gene058918:CDS | 35.0% | |
ATGCTTGACAAAAAAACAGC+AGG | + | chr2.2:6541230-6541249 | MS.gene058918:CDS | 35.0% | |
ATGTGGAATGAGTTCAAGAA+TGG | + | chr2.2:6541475-6541494 | MS.gene058918:CDS | 35.0% | |
ATGTGTACTTCTTCAACCAT+AGG | - | chr2.2:6541212-6541231 | None:intergenic | 35.0% | |
ATTTGGACTGCAATTCTCAT+TGG | - | chr2.2:6541258-6541277 | None:intergenic | 35.0% | |
CACAACAGCATAAAGTCATT+TGG | - | chr2.2:6539355-6539374 | None:intergenic | 35.0% | |
GAAAATGTATGTCACCTAGA+TGG | - | chr2.2:6539613-6539632 | None:intergenic | 35.0% | |
GCCAACTTAAGTGAATTCAA+AGG | - | chr2.2:6540809-6540828 | None:intergenic | 35.0% | |
GTAAATGAGTTAAATGAGGC+AGG | + | chr2.2:6541419-6541438 | MS.gene058918:CDS | 35.0% | |
TCAAGTCTATCACTTCCAAT+AGG | + | chr2.2:6538625-6538644 | MS.gene058918:CDS | 35.0% | |
TCATGTCCACTATGTCTATA+TGG | - | chr2.2:6541524-6541543 | None:intergenic | 35.0% | |
TGTTGCATCATTAACCTACT+TGG | - | chr2.2:6538399-6538418 | None:intergenic | 35.0% | |
TTCAATGCCTTATCCATTCT+AGG | - | chr2.2:6541320-6541339 | None:intergenic | 35.0% | |
TTTCCATAACTAGTACTAGC+AGG | - | chr2.2:6538933-6538952 | None:intergenic | 35.0% | |
! | CAATCTCTAGAAATGATGGA+AGG | - | chr2.2:6538858-6538877 | None:intergenic | 35.0% |
! | CATTCTGAACTGAGTGATTT+TGG | + | chr2.2:6538450-6538469 | MS.gene058918:CDS | 35.0% |
! | CCTAGTTCTTGATACTCAAA+AGG | - | chr2.2:6538363-6538382 | None:intergenic | 35.0% |
! | CTGTTTTCGTCAACAGTTTA+AGG | + | chr2.2:6539812-6539831 | MS.gene058918:intron | 35.0% |
! | GCCAACAGTGGAAATTTTTA+GGG | - | chr2.2:6540932-6540951 | None:intergenic | 35.0% |
! | GCTTTATTCTGCTGATAATC+TGG | - | chr2.2:6539188-6539207 | None:intergenic | 35.0% |
! | GTATTGACAAATCATTTCGC+AGG | - | chr2.2:6540382-6540401 | None:intergenic | 35.0% |
! | TATGGTGGTGAAAAGCAATT+AGG | + | chr2.2:6538561-6538580 | MS.gene058918:CDS | 35.0% |
! | TCCACAATCTCTAGAAATGA+TGG | - | chr2.2:6538862-6538881 | None:intergenic | 35.0% |
! | TCCATCATTTCTAGAGATTG+TGG | + | chr2.2:6538858-6538877 | MS.gene058918:CDS | 35.0% |
! | TTAGAACTATTGGTTGTGGT+CGG | - | chr2.2:6540404-6540423 | None:intergenic | 35.0% |
! | TTGATAACACCACAGCAATT+GGG | + | chr2.2:6539896-6539915 | MS.gene058918:intron | 35.0% |
! | TTTGATAACACCACAGCAAT+TGG | + | chr2.2:6539895-6539914 | MS.gene058918:intron | 35.0% |
!! | AATGTTTCCTAGTGCTGATT+GGG | + | chr2.2:6539130-6539149 | MS.gene058918:CDS | 35.0% |
!! | ATGTGATGTTTCTGAAACTG+AGG | + | chr2.2:6539067-6539086 | MS.gene058918:CDS | 35.0% |
!! | CCTTTTGAGTATCAAGAACT+AGG | + | chr2.2:6538360-6538379 | MS.gene058918:CDS | 35.0% |
!! | TATTGATCAGTGAGTTGATG+TGG | - | chr2.2:6538501-6538520 | None:intergenic | 35.0% |
!!! | GGCCTTTTGATTTGTTTGAT+TGG | + | chr2.2:6540826-6540845 | MS.gene058918:intron | 35.0% |
!!! | TGGTTTTGAAACTGTTTTGC+CGG | + | chr2.2:6540161-6540180 | MS.gene058918:intron | 35.0% |
AACCCCTTGAAGCCTATAAA+TGG | + | chr2.2:6539563-6539582 | MS.gene058918:intron | 40.0% | |
ACAACCTTTCCCCCATTTAT+AGG | - | chr2.2:6539578-6539597 | None:intergenic | 40.0% | |
ACCCCTTGAAGCCTATAAAT+GGG | + | chr2.2:6539564-6539583 | MS.gene058918:intron | 40.0% | |
AGACACCGATAAACATGTGT+TGG | + | chr2.2:6540741-6540760 | MS.gene058918:CDS | 40.0% | |
AGTCCTGCTAGTACTAGTTA+TGG | + | chr2.2:6538927-6538946 | MS.gene058918:CDS | 40.0% | |
AGTTAAATGAGGCAGGACAA+TGG | + | chr2.2:6541426-6541445 | MS.gene058918:CDS | 40.0% | |
ATCCACAACAACAGCATGTT+TGG | + | chr2.2:6540516-6540535 | MS.gene058918:CDS | 40.0% | |
ATCGAGACATTTGGTCACAT+TGG | + | chr2.2:6540857-6540876 | MS.gene058918:intron | 40.0% | |
CAATAGGTCAGAGTCAGAAA+TGG | + | chr2.2:6538641-6538660 | MS.gene058918:CDS | 40.0% | |
CATGATGTTGTGAGATCACT+TGG | + | chr2.2:6541539-6541558 | MS.gene058918:CDS | 40.0% | |
CATTTCTGACTCTGACCTAT+TGG | - | chr2.2:6538643-6538662 | None:intergenic | 40.0% | |
CTAGCAGGACTCTTTGAATT+AGG | - | chr2.2:6538918-6538937 | None:intergenic | 40.0% | |
CTTTAATAGTCAAAGCCTGG+AGG | - | chr2.2:6539870-6539889 | None:intergenic | 40.0% | |
GAAACTGAGGTTGCTTCTAA+AGG | + | chr2.2:6539080-6539099 | MS.gene058918:CDS | 40.0% | |
GCTTATGTTCATGCAAGAAG+AGG | + | chr2.2:6539211-6539230 | MS.gene058918:CDS | 40.0% | |
GGAATGAGTTCAAGAATGGA+TGG | + | chr2.2:6541479-6541498 | MS.gene058918:CDS | 40.0% | |
GTACCATCAACAGATGCAAA+TGG | + | chr2.2:6540220-6540239 | MS.gene058918:CDS | 40.0% | |
GTAGCTTAGGTGTTTCTTTG+CGG | + | chr2.2:6539162-6539181 | MS.gene058918:CDS | 40.0% | |
GTCATTTGAAAGGTCCATCT+AGG | + | chr2.2:6539596-6539615 | MS.gene058918:intron | 40.0% | |
GTGCCATAAGTTCTCTCATT+TGG | - | chr2.2:6541275-6541294 | None:intergenic | 40.0% | |
TGCCGGGATATGTGTAATAT+AGG | + | chr2.2:6540178-6540197 | MS.gene058918:intron | 40.0% | |
TGTGGATCATGAAAACCTGA+TGG | - | chr2.2:6540503-6540522 | None:intergenic | 40.0% | |
TGTTGTGAGATCACTTGGAT+TGG | + | chr2.2:6541544-6541563 | MS.gene058918:CDS | 40.0% | |
TTCAAAGCCAGACTGATGTA+AGG | - | chr2.2:6540290-6540309 | None:intergenic | 40.0% | |
TTCGCAGGACTTCACTTATA+TGG | - | chr2.2:6540367-6540386 | None:intergenic | 40.0% | |
! | AAACCTGATGGAACCTTTTC+AGG | - | chr2.2:6540491-6540510 | None:intergenic | 40.0% |
! | ACATGTTTATCGGTGTCTGT+AGG | - | chr2.2:6540739-6540758 | None:intergenic | 40.0% |
! | AGAACTTATGGCACTGAAGT+GGG | + | chr2.2:6541281-6541300 | MS.gene058918:CDS | 40.0% |
! | CATGTTTATCGGTGTCTGTA+GGG | - | chr2.2:6540738-6540757 | None:intergenic | 40.0% |
! | GAGCTTTAATAGTCAAAGCC+TGG | - | chr2.2:6539873-6539892 | None:intergenic | 40.0% |
! | GGCCAACAGTGGAAATTTTT+AGG | - | chr2.2:6540933-6540952 | None:intergenic | 40.0% |
! | GGGAAAGGTTGTCATTTGAA+AGG | + | chr2.2:6539586-6539605 | MS.gene058918:intron | 40.0% |
! | TCACATGTTGTCGCCAATTT+TGG | - | chr2.2:6539053-6539072 | None:intergenic | 40.0% |
! | TGGGTTTTGCTCTCCAAAAT+TGG | + | chr2.2:6539037-6539056 | MS.gene058918:CDS | 40.0% |
! | TTTGGGCTCTAATTCCATCT+TGG | - | chr2.2:6539936-6539955 | None:intergenic | 40.0% |
!! | ATGTTTCCTAGTGCTGATTG+GGG | + | chr2.2:6539131-6539150 | MS.gene058918:CDS | 40.0% |
!! | CAATGTTTCCTAGTGCTGAT+TGG | + | chr2.2:6539129-6539148 | MS.gene058918:CDS | 40.0% |
!!! | GGTTTTGAAACTGTTTTGCC+GGG | + | chr2.2:6540162-6540181 | MS.gene058918:intron | 40.0% |
AATTTGTACCATGGACCTCC+AGG | + | chr2.2:6539852-6539871 | MS.gene058918:intron | 45.0% | |
ACCATGAATTACTCGACGAG+GGG | - | chr2.2:6539787-6539806 | None:intergenic | 45.0% | |
AGACCTGAAAAGGTTCCATC+AGG | + | chr2.2:6540485-6540504 | MS.gene058918:CDS | 45.0% | |
AGCTACTCCTTACATCAGTC+TGG | + | chr2.2:6540280-6540299 | MS.gene058918:CDS | 45.0% | |
ATCATCACACCAAGACTTGG+TGG | + | chr2.2:6538884-6538903 | MS.gene058918:CDS | 45.0% | |
ATGCCTTATCCATTCTAGGC+TGG | - | chr2.2:6541316-6541335 | None:intergenic | 45.0% | |
CACAACAACAGCATGTTTGG+AGG | + | chr2.2:6540519-6540538 | MS.gene058918:CDS | 45.0% | |
CACCATGAATTACTCGACGA+GGG | - | chr2.2:6539788-6539807 | None:intergenic | 45.0% | |
CAGTATAGACCCAATTGCTG+TGG | - | chr2.2:6539908-6539927 | None:intergenic | 45.0% | |
CCCCATTTATAGGCTTCAAG+GGG | - | chr2.2:6539568-6539587 | None:intergenic | 45.0% | |
CCCCCATTTATAGGCTTCAA+GGG | - | chr2.2:6539569-6539588 | None:intergenic | 45.0% | |
CCCCTTGAAGCCTATAAATG+GGG | + | chr2.2:6539565-6539584 | MS.gene058918:intron | 45.0% | |
CCCTTGAAGCCTATAAATGG+GGG | + | chr2.2:6539566-6539585 | MS.gene058918:intron | 45.0% | |
CTCCAAACATGCTGTTGTTG+TGG | - | chr2.2:6540521-6540540 | None:intergenic | 45.0% | |
GAAGCCTATAAATGGGGGAA+AGG | + | chr2.2:6539571-6539590 | MS.gene058918:intron | 45.0% | |
GACAATGGAGTAGAGAGAAG+AGG | + | chr2.2:6541441-6541460 | MS.gene058918:CDS | 45.0% | |
GAGACAGAGAGACAAACGTA+CGG | - | chr2.2:6540614-6540633 | None:intergenic | 45.0% | |
GTATTCCAACCACCAAGTCT+TGG | - | chr2.2:6538896-6538915 | None:intergenic | 45.0% | |
TAACCAGTAAAAGGGCCAAG+TGG | - | chr2.2:6538963-6538982 | None:intergenic | 45.0% | |
TATGGAAATCTGGGTCCACT+TGG | + | chr2.2:6538945-6538964 | MS.gene058918:CDS | 45.0% | |
TCACCATGAATTACTCGACG+AGG | - | chr2.2:6539789-6539808 | None:intergenic | 45.0% | |
TCATCCTTCGAATCAGTAGC+AGG | + | chr2.2:6540248-6540267 | MS.gene058918:CDS | 45.0% | |
TCCCCCATTTATAGGCTTCA+AGG | - | chr2.2:6539570-6539589 | None:intergenic | 45.0% | |
TTTATGGATCTGGCCAACAG+TGG | - | chr2.2:6540944-6540963 | None:intergenic | 45.0% | |
! | GAGAACTTATGGCACTGAAG+TGG | + | chr2.2:6541280-6541299 | MS.gene058918:CDS | 45.0% |
! | GGCTTTGATCCATGCATCTT+AGG | - | chr2.2:6540454-6540473 | None:intergenic | 45.0% |
!! | AAGACCTGCTACTGATTCGA+AGG | - | chr2.2:6540255-6540274 | None:intergenic | 45.0% |
!! | CATGTGTTGGCTACTCAAAC+TGG | + | chr2.2:6540754-6540773 | MS.gene058918:CDS | 45.0% |
!! | TGTTTCCTAGTGCTGATTGG+GGG | + | chr2.2:6539132-6539151 | MS.gene058918:CDS | 45.0% |
!!! | AGTTTAATTATTATATTTTT+TGG | + | chr2.2:6540691-6540710 | MS.gene058918:intron | 5.0% |
CAAAGGAGTAGGAACCTACC+TGG | - | chr2.2:6540792-6540811 | None:intergenic | 50.0% | |
CAGCCAGCCTAGAATGGATA+AGG | + | chr2.2:6541310-6541329 | MS.gene058918:CDS | 50.0% | |
GTGCAGCTTCAGAACCAAGT+AGG | + | chr2.2:6538382-6538401 | MS.gene058918:CDS | 50.0% | |
TCCCCTCGTCGAGTAATTCA+TGG | + | chr2.2:6539783-6539802 | MS.gene058918:intron | 50.0% | |
TCCTCATGCTCTCTAGTCTC+TGG | - | chr2.2:6539457-6539476 | None:intergenic | 50.0% | |
TGGGGGAACAGAAGTAGCTT+AGG | + | chr2.2:6539149-6539168 | MS.gene058918:CDS | 50.0% | |
TGTGGCAAGCCTAAGATGCA+TGG | + | chr2.2:6540442-6540461 | MS.gene058918:CDS | 50.0% | |
TTAATGCTCGAGTTCGCGTG+TGG | + | chr2.2:6541183-6541202 | MS.gene058918:CDS | 50.0% | |
TTCATGCAGCCAGCCTAGAA+TGG | + | chr2.2:6541304-6541323 | MS.gene058918:CDS | 50.0% | |
! | CAGTGGCGATTCTAAGAGCT+TGG | + | chr2.2:6540567-6540586 | MS.gene058918:CDS | 50.0% |
! | GCTGTTGTGTGGACTGCAAA+AGG | + | chr2.2:6539366-6539385 | MS.gene058918:intron | 50.0% |
! | TCCAGAGACTAGAGAGCATG+AGG | + | chr2.2:6539453-6539472 | MS.gene058918:intron | 50.0% |
!! | AACTGGTCTTTCGCGAAACC+AGG | + | chr2.2:6540771-6540790 | MS.gene058918:CDS | 50.0% |
!! | TCACACCAAGACTTGGTGGT+TGG | + | chr2.2:6538888-6538907 | MS.gene058918:CDS | 50.0% |
AGAATCGCCACTGCACGTTC+CGG | - | chr2.2:6540560-6540579 | None:intergenic | 55.0% | |
AGTCAAAGCCTGGAGGTCCA+TGG | - | chr2.2:6539863-6539882 | None:intergenic | 55.0% | |
AGTTCGCGTGTGGAAGCCTA+TGG | + | chr2.2:6541193-6541212 | MS.gene058918:CDS | 55.0% | |
CATGTTTGGAGGCCTCAGAG+AGG | + | chr2.2:6540530-6540549 | MS.gene058918:CDS | 55.0% | |
CTGTTCCCCCAATCAGCACT+AGG | - | chr2.2:6539140-6539159 | None:intergenic | 55.0% | |
GGTCTTTCGCGAAACCAGGT+AGG | + | chr2.2:6540775-6540794 | MS.gene058918:intron | 55.0% | |
! | GGTCCACTTGGCCCTTTTAC+TGG | + | chr2.2:6538957-6538976 | MS.gene058918:CDS | 55.0% |
AGGCTTTCCGGAACGTGCAG+TGG | + | chr2.2:6540550-6540569 | MS.gene058918:CDS | 60.0% | |
CGTTCCGGAAAGCCTCTCTG+AGG | - | chr2.2:6540545-6540564 | None:intergenic | 60.0% | |
GAGGCCTCAGAGAGGCTTTC+CGG | + | chr2.2:6540538-6540557 | MS.gene058918:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 6538249 | 6541580 | 6538249 | ID=MS.gene058918 |
chr2.2 | mRNA | 6538249 | 6541580 | 6538249 | ID=MS.gene058918.t1;Parent=MS.gene058918 |
chr2.2 | exon | 6538249 | 6539232 | 6538249 | ID=MS.gene058918.t1.exon1;Parent=MS.gene058918.t1 |
chr2.2 | CDS | 6538249 | 6539232 | 6538249 | ID=cds.MS.gene058918.t1;Parent=MS.gene058918.t1 |
chr2.2 | exon | 6540200 | 6540612 | 6540200 | ID=MS.gene058918.t1.exon2;Parent=MS.gene058918.t1 |
chr2.2 | CDS | 6540200 | 6540612 | 6540200 | ID=cds.MS.gene058918.t1;Parent=MS.gene058918.t1 |
chr2.2 | exon | 6540732 | 6540792 | 6540732 | ID=MS.gene058918.t1.exon3;Parent=MS.gene058918.t1 |
chr2.2 | CDS | 6540732 | 6540792 | 6540732 | ID=cds.MS.gene058918.t1;Parent=MS.gene058918.t1 |
chr2.2 | exon | 6541167 | 6541580 | 6541167 | ID=MS.gene058918.t1.exon4;Parent=MS.gene058918.t1 |
chr2.2 | CDS | 6541167 | 6541580 | 6541167 | ID=cds.MS.gene058918.t1;Parent=MS.gene058918.t1 |
Gene Sequence |
Protein sequence |