AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31311

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31311.t1 MTR_2g094020 94.800 827 39 1 1 823 17 843 0.0 1625
MS.gene31311.t1 MTR_2g094060 92.778 817 59 0 1 817 17 833 0.0 1575
MS.gene31311.t1 MTR_2g094060 92.229 785 61 0 1 785 17 801 0.0 1503
MS.gene31311.t1 MTR_4g059680 78.266 819 172 3 2 816 22 838 0.0 1338
MS.gene31311.t1 MTR_2g094060 92.687 670 49 0 1 670 17 686 0.0 1288
MS.gene31311.t1 MTR_8g016230 55.260 827 344 11 4 816 23 837 0.0 928
MS.gene31311.t1 MTR_5g021190 55.795 837 335 15 4 822 24 843 0.0 927
MS.gene31311.t1 MTR_2g100110 55.085 826 345 11 5 816 27 840 0.0 914
MS.gene31311.t1 MTR_8g085210 51.809 857 359 14 5 816 49 896 0.0 875
MS.gene31311.t1 MTR_1g018200 59.097 709 271 8 5 703 30 729 0.0 854
MS.gene31311.t1 MTR_2g042610 52.524 832 354 14 2 817 23 829 0.0 840
MS.gene31311.t1 MTR_2g039120 56.982 709 285 8 5 703 27 725 0.0 838
MS.gene31311.t1 MTR_1g023120 56.094 722 286 10 1 707 25 730 0.0 831
MS.gene31311.t1 MTR_3g096900 56.284 732 295 9 4 714 25 752 0.0 812
MS.gene31311.t1 MTR_5g025830 50.000 840 355 19 6 816 28 831 0.0 801
MS.gene31311.t1 MTR_2g039120 57.122 674 269 8 5 668 27 690 0.0 796
MS.gene31311.t1 MTR_3g112370 53.750 720 307 9 4 710 26 732 0.0 796
MS.gene31311.t1 MTR_5g024080 48.626 837 372 16 2 816 6 806 0.0 788
MS.gene31311.t1 MTR_1g023120 55.604 687 275 9 36 707 1 672 0.0 780
MS.gene31311.t1 MTR_3g096900 57.080 678 274 8 4 668 25 698 0.0 763
MS.gene31311.t1 MTR_3g005570 47.165 829 387 13 4 820 24 813 0.0 749
MS.gene31311.t1 MTR_2g039120 57.072 608 243 7 5 602 27 626 0.0 712
MS.gene31311.t1 MTR_4g073290 45.181 830 405 17 6 817 28 825 0.0 712
MS.gene31311.t1 MTR_2g100110 59.019 571 216 6 5 566 27 588 0.0 700
MS.gene31311.t1 MTR_3g117840 43.237 828 423 16 5 818 34 828 0.0 695
MS.gene31311.t1 MTR_3g096900 57.591 606 241 7 4 597 25 626 0.0 684
MS.gene31311.t1 MTR_2g039120 57.645 569 226 5 5 566 27 587 0.0 682
MS.gene31311.t1 MTR_3g096910 49.721 718 318 12 6 713 27 711 0.0 681
MS.gene31311.t1 MTR_3g088520 49.432 704 311 12 5 702 25 689 0.0 658
MS.gene31311.t1 MTR_3g088520 48.588 673 301 12 36 702 1 634 0.0 612
MS.gene31311.t1 MTR_3g096910 45.623 594 280 12 130 713 1 561 2.58e-164 489
MS.gene31311.t1 MTR_5g022590 40.798 326 154 7 25 348 11 299 1.77e-76 254
MS.gene31311.t1 MTR_5g022590 34.483 116 71 2 670 781 304 418 2.75e-15 79.3
MS.gene31311.t1 MTR_4g126330 36.740 411 154 14 263 668 133 442 1.32e-63 221
MS.gene31311.t1 MTR_4g126330 68.478 92 29 0 61 152 25 116 1.05e-37 147
MS.gene31311.t1 MTR_3g005610 35.789 285 142 8 418 692 27 280 4.76e-40 150
MS.gene31311.t1 MTR_2g059440 34.146 287 143 9 418 692 27 279 1.48e-33 131
MS.gene31311.t1 MTR_2g100000 30.595 353 204 9 16 337 64 406 1.88e-30 128
MS.gene31311.t1 MTR_2g059430 30.566 265 114 6 434 692 11 211 9.99e-23 98.6
MS.gene31311.t1 MTR_2g100000 28.520 277 157 9 92 337 2 268 1.08e-13 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31311.t1 AT2G28470 72.276 826 212 7 5 817 31 852 0.0 1235
MS.gene31311.t1 AT2G28470 72.276 826 212 7 5 817 31 852 0.0 1235
MS.gene31311.t1 AT2G28470 72.276 826 212 7 5 817 25 846 0.0 1234
MS.gene31311.t1 AT2G28470 72.276 826 212 7 5 817 25 846 0.0 1234
MS.gene31311.t1 AT2G28470 73.894 678 163 5 3 670 29 702 0.0 1044
MS.gene31311.t1 AT4G36360 54.162 829 348 13 6 817 33 846 0.0 920
MS.gene31311.t1 AT2G32810 53.044 854 353 12 5 820 37 880 0.0 916
MS.gene31311.t1 AT4G36360 54.162 829 347 14 6 817 33 845 0.0 915
MS.gene31311.t1 AT3G13750 55.435 828 341 12 5 817 33 847 0.0 911
MS.gene31311.t1 AT2G32810 53.309 816 334 11 5 783 37 842 0.0 885
MS.gene31311.t1 AT5G20710 50.602 830 364 16 4 816 26 826 0.0 840
MS.gene31311.t1 AT4G26140 55.085 708 297 9 6 703 29 725 0.0 815
MS.gene31311.t1 AT1G45130 55.028 716 297 10 3 705 28 731 0.0 810
MS.gene31311.t1 AT3G52840 55.994 709 288 10 6 703 83 778 0.0 808
MS.gene31311.t1 AT3G52840 55.994 709 288 10 6 703 29 724 0.0 807
MS.gene31311.t1 AT5G63810 54.266 715 310 8 3 705 29 738 0.0 804
MS.gene31311.t1 AT4G26140 53.479 733 295 11 6 703 29 750 0.0 801
MS.gene31311.t1 AT5G56870 54.930 710 295 10 5 703 28 723 0.0 793
MS.gene31311.t1 AT1G31740 49.338 831 336 15 2 816 18 779 0.0 785
MS.gene31311.t1 AT4G26140 53.868 698 276 11 6 668 29 715 0.0 765
MS.gene31311.t1 AT1G77410 47.700 826 385 14 5 817 24 815 0.0 736
MS.gene31311.t1 AT1G77410 47.413 831 385 15 5 817 24 820 0.0 730
MS.gene31311.t1 AT1G45130 53.528 652 278 10 67 705 13 652 0.0 710
MS.gene31311.t1 AT4G26140 56.623 604 245 6 6 601 29 623 0.0 709
MS.gene31311.t1 AT4G26140 56.623 604 245 6 6 601 29 623 0.0 709
MS.gene31311.t1 AT4G26140 56.271 606 246 7 6 601 29 625 0.0 706
MS.gene31311.t1 AT5G63800 48.722 704 323 11 6 702 32 704 0.0 679
MS.gene31311.t1 AT2G16730 41.478 839 435 16 6 822 44 848 0.0 670
MS.gene31311.t1 AT4G35010 41.099 837 441 16 6 822 41 845 0.0 663
MS.gene31311.t1 AT4G26140 58.824 527 203 5 6 525 29 548 0.0 652
MS.gene31311.t1 AT4G26140 56.522 552 201 7 6 525 29 573 0.0 639
MS.gene31311.t1 AT4G26140 56.522 552 201 7 6 525 29 573 0.0 639
MS.gene31311.t1 AT4G38590 41.103 798 422 15 36 816 1 767 0.0 632
MS.gene31311.t1 AT4G38590 40.727 798 429 15 32 816 65 831 0.0 625
MS.gene31311.t1 AT1G77410 45.379 725 349 14 106 817 19 709 0.0 587
MS.gene31311.t1 AT1G77410 45.379 725 349 14 106 817 19 709 0.0 587
MS.gene31311.t1 AT5G20710 46.000 650 305 16 184 816 1 621 0.0 571
MS.gene31311.t1 AT2G04060 37.500 368 153 8 271 635 23 316 3.18e-58 206
MS.gene31311.t1 AT2G04062 41.808 177 82 2 2 178 3 158 3.24e-40 145
MS.gene31311.t1 AT1G72990 28.487 509 300 19 16 483 18 503 2.49e-39 155
MS.gene31311.t1 AT1G72990 28.656 506 303 18 16 483 73 558 2.76e-39 156
MS.gene31311.t1 AT1G72990 28.656 506 303 18 16 483 73 558 2.76e-39 156
MS.gene31311.t1 AT1G72990 33.956 321 171 11 27 316 22 332 2.15e-34 140
MS.gene31311.t1 AT3G53080 42.857 91 50 2 727 816 63 152 6.59e-17 79.3
MS.gene31311.t1 AT3G53075 42.857 84 45 3 734 816 81 162 7.07e-14 70.9
MS.gene31311.t1 AT3G53075 42.857 84 45 3 734 816 111 192 9.00e-14 71.2

Find 202 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTTCACAGAGCTTTA+TGG 0.133151 2.3:+7705988 None:intergenic
AACTGACAATGAACCATTTA+AGG 0.172483 2.3:-7707240 MS.gene31311:intron
TTGACAGTGGTTTCCCTCTT+TGG 0.180260 2.3:-7707292 MS.gene31311:intron
CAAATCAACGGTTGGTTCTT+AGG 0.201157 2.3:+7704233 None:intergenic
TGACATTTGGTTTGAGTAAA+AGG 0.209652 2.3:+7703924 None:intergenic
TGAAGGTAACTTACCTTAAA+TGG 0.215098 2.3:+7707227 None:intergenic
TCCATAGCTTGCAAATTTAA+TGG 0.221804 2.3:+7703540 None:intergenic
AAACGTAGGGTCTTGATTTC+TGG 0.241223 2.3:-7708139 MS.gene31311:CDS
CTTTGGCTTCACTTCATTCC+AGG 0.251644 2.3:-7707275 MS.gene31311:CDS
TTGATACAGGTTGGCCTAAA+AGG 0.256059 2.3:-7704314 MS.gene31311:intron
AAAGGTGAGGCTTGGGTAAA+TGG 0.261772 2.3:-7704023 MS.gene31311:CDS
TTTCCAGAAATTACTGTGAT+TGG 0.274947 2.3:+7704675 None:intergenic
AACTTACATGAACCTGTTAA+AGG 0.282398 2.3:-7707920 MS.gene31311:CDS
TAGAAACTTCTAGTTCAAAA+TGG 0.289791 2.3:-7705293 MS.gene31311:CDS
GAGTTTAACAGTTGGACTTC+AGG 0.290254 2.3:-7704634 MS.gene31311:intron
CTTAGGTTTGTCTTTGTTCC+CGG 0.301351 2.3:+7704713 None:intergenic
CTGGTAAATCATACATCAAT+TGG 0.305487 2.3:-7706905 MS.gene31311:CDS
TTTCCCCTGATTCTGTATCT+TGG 0.306746 2.3:+7703617 None:intergenic
TATATGCTGCAGGAATTATT+AGG 0.322005 2.3:-7706048 MS.gene31311:intron
TTAAACTCAGCAGATCAATT+TGG 0.322052 2.3:+7704649 None:intergenic
CTCTTGATACAGGTGTTCCT+TGG 0.323700 2.3:-7706863 MS.gene31311:CDS
ACTACTTGTGGTACTCATTA+AGG 0.331342 2.3:-7705176 MS.gene31311:intron
CTAAGAACCAACCGTTGATT+TGG 0.333687 2.3:-7704232 MS.gene31311:CDS
TCAATATAAACCTCTAGGTT+TGG 0.334548 2.3:+7705929 None:intergenic
GGCCTAAAAGGTGAAGATTT+AGG 0.334619 2.3:-7704302 MS.gene31311:CDS
TTCGTAAACTGCAAGCTTGC+AGG 0.336150 2.3:-7704994 MS.gene31311:intron
GACAAAGCATTGGGCGATAC+TGG 0.337595 2.3:-7704001 MS.gene31311:CDS
AAAACCTGAGATAAAATTAT+AGG 0.339759 2.3:+7707068 None:intergenic
TCCATTAAATTTGCAAGCTA+TGG 0.340886 2.3:-7703541 MS.gene31311:CDS
GCTTCAACAGCTAAACTCTT+TGG 0.347957 2.3:+7702870 None:intergenic
GACAGAACCTGGCCTTTAAC+AGG 0.350249 2.3:+7707908 None:intergenic
GTTTGTGCTGAATGGAACTA+TGG 0.350260 2.3:-7707383 MS.gene31311:CDS
GATGATATATTGTCTAAAAC+TGG 0.350754 2.3:-7705237 MS.gene31311:CDS
AACATTTCAAAATTACTATA+TGG 0.352183 2.3:-7706401 MS.gene31311:intron
AGCGGTGAATCGCTTCATTT+CGG 0.355773 2.3:+7707142 None:intergenic
CAACATGTTACATGTTTGTA+TGG 0.360481 2.3:+7702832 None:intergenic
AAATCAACGGTTGGTTCTTA+GGG 0.361145 2.3:+7704234 None:intergenic
GAGATTACCTGATTATGATT+AGG 0.371095 2.3:+7703565 None:intergenic
TCCACAATTCATGTGACATT+TGG 0.376285 2.3:+7703911 None:intergenic
CCATTTGCACACCAGAACTA+TGG 0.379523 2.3:-7704519 MS.gene31311:intron
CGGACGCTGCAGAAGCAATA+AGG 0.386639 2.3:-7703485 MS.gene31311:CDS
TTCCAGAAATTACTGTGATT+GGG 0.394341 2.3:+7704676 None:intergenic
TGGAACCAAGATACAGAATC+AGG 0.402684 2.3:-7703622 MS.gene31311:CDS
GGAGTATCAACTGATACATT+TGG 0.403792 2.3:-7702912 MS.gene31311:CDS
AGCACTACATTCTTGCAATC+TGG 0.405989 2.3:+7705583 None:intergenic
TGACAGATAGAAAATGAGTA+TGG 0.406178 2.3:-7706954 MS.gene31311:intron
GAATTCTTAGGGAGTCAAAC+CGG 0.407325 2.3:-7704732 MS.gene31311:intron
TCTTGATACAGGTGTTCCTT+GGG 0.408696 2.3:-7706862 MS.gene31311:CDS
CAACACTCTTGTATTGTTTG+AGG 0.410261 2.3:-7703743 MS.gene31311:CDS
ATCCCAATCACAGTAATTTC+TGG 0.410481 2.3:-7704678 MS.gene31311:CDS
CTTCTAGTTCAAAATGGAGT+TGG 0.418426 2.3:-7705287 MS.gene31311:CDS
CTCTCAGAAGTGGACATATC+AGG 0.418657 2.3:-7704409 MS.gene31311:intron
GGTCTCTCTAGTGGAAGTTC+AGG 0.420000 2.3:-7704281 MS.gene31311:CDS
CAAGTGTCCTAATCATAATC+AGG 0.421130 2.3:-7703572 MS.gene31311:CDS
GTCCATATGTTTGTGCTGAA+TGG 0.430727 2.3:-7707391 MS.gene31311:CDS
GATGCACCGATTGATGAGTA+TGG 0.431559 2.3:-7706189 MS.gene31311:intron
CCCGTGAAGTCAATCACAAC+TGG 0.439048 2.3:+7704053 None:intergenic
TGGTTCCACAAGTCTATTTG+AGG 0.439591 2.3:+7703637 None:intergenic
TTTGATTTCTGAATAAGGTC+TGG 0.440486 2.3:+7707983 None:intergenic
AGAGTCCACGTTGGCGAGAA+AGG 0.447360 2.3:+7705675 None:intergenic
TCCAGTTGTGATTGACTTCA+CGG 0.448346 2.3:-7704054 MS.gene31311:CDS
TTCCATTCAGCACAAACATA+TGG 0.448715 2.3:+7707389 None:intergenic
TGGACCAAGAGAAGTAATCT+TGG 0.450309 2.3:+7705949 None:intergenic
AACTTCGTAACTGAAGATAT+CGG 0.452724 2.3:-7705321 MS.gene31311:CDS
CATAGAGCATTGGTCATTGA+TGG 0.456546 2.3:-7708163 MS.gene31311:CDS
CTCTTTGGCACTCCTCTACA+AGG 0.457641 2.3:+7702885 None:intergenic
TAAATGGTTCATTGTCAGTT+CGG 0.461736 2.3:+7707243 None:intergenic
TCTTATTAACAGGCCTGCAT+TGG 0.462035 2.3:-7702954 MS.gene31311:intron
GATGGGAAAAGGTGAGGCTT+GGG 0.463029 2.3:-7704030 MS.gene31311:CDS
ACGTGGACTCTAAATCTGAT+AGG 0.464050 2.3:-7705663 MS.gene31311:CDS
GGACCAAGAGAAGTAATCTT+GGG 0.464627 2.3:+7705950 None:intergenic
ATCGCAGTAAAATCCATTGC+AGG 0.465312 2.3:+7706659 None:intergenic
TTTGGCTTCACTTCATTCCA+GGG 0.468859 2.3:-7707274 MS.gene31311:CDS
CCAACCGTTGATTTGGTACA+AGG 0.469575 2.3:-7704225 MS.gene31311:intron
AATACAAGAGTGTTGCCGTT+TGG 0.471516 2.3:+7703751 None:intergenic
GGGATGTCCACATTAAGCTT+AGG 0.472710 2.3:+7704696 None:intergenic
GACTTCACGGGGATGGGAAA+AGG 0.474886 2.3:-7704041 MS.gene31311:CDS
GAACCCAAGATTACTTCTCT+TGG 0.475327 2.3:-7705953 MS.gene31311:CDS
CGGGACTATATGTGCATCTC+CGG 0.476042 2.3:-7707418 MS.gene31311:CDS
ATGGCTACATCTCTTGATAC+AGG 0.477673 2.3:-7706873 MS.gene31311:CDS
GGAGACATCGATTCAGCCTA+TGG 0.480983 2.3:-7706933 MS.gene31311:CDS
GTGATTGACTTCACGGGGAT+GGG 0.481386 2.3:-7704047 MS.gene31311:CDS
TGTGATTGACTTCACGGGGA+TGG 0.482087 2.3:-7704048 MS.gene31311:CDS
TTCAAACCTTTCAATATCAC+GGG 0.483423 2.3:+7704459 None:intergenic
ACCAACTTTGACCGAAGTAC+TGG 0.484159 2.3:-7706243 MS.gene31311:CDS
CTTCAAACCTTTCAATATCA+CGG 0.484365 2.3:+7704458 None:intergenic
TTCCACAAGTCTATTTGAGG+TGG 0.485209 2.3:+7703640 None:intergenic
GGCGATGTCAATTGTAAAGA+AGG 0.486852 2.3:-7703464 MS.gene31311:intron
TTCCTTCACATTGAATCGCT+TGG 0.490930 2.3:-7705033 MS.gene31311:CDS
TCATAACTTGTAGCAATGAA+TGG 0.491869 2.3:+7706216 None:intergenic
TGGGTAAATGGACAAAGCAT+TGG 0.493909 2.3:-7704011 MS.gene31311:CDS
GCAAGCTATGGAACACCACT+AGG 0.494447 2.3:-7703529 MS.gene31311:CDS
GGATGGGAAAAGGTGAGGCT+TGG 0.496077 2.3:-7704031 MS.gene31311:CDS
TTTGAAATGTTCCACCTCGT+TGG 0.498204 2.3:+7706413 None:intergenic
ATATTGAAAGGTTTGAAGAA+TGG 0.499672 2.3:-7704453 MS.gene31311:CDS
CTTGTATTGTTTGAGGAAAG+TGG 0.502872 2.3:-7703736 MS.gene31311:CDS
GGGTAAATGGACAAAGCATT+GGG 0.505117 2.3:-7704010 MS.gene31311:CDS
ATAAAACCTACGATTGGATC+AGG 0.506070 2.3:+7706816 None:intergenic
ATCGTACCATACTCATCAAT+CGG 0.507183 2.3:+7706183 None:intergenic
CTATATGTGCATCTCCGGAT+TGG 0.510671 2.3:-7707413 MS.gene31311:CDS
TGGTAAATCATACATCAATT+GGG 0.516725 2.3:-7706904 MS.gene31311:CDS
GTAGCAAAAGCTATTTGCGT+TGG 0.522393 2.3:+7703706 None:intergenic
ATGTAAGTTCCAGAAAACAT+AGG 0.522734 2.3:+7707934 None:intergenic
GATTCAGCCTATGGTTCTGC+TGG 0.524874 2.3:-7706924 MS.gene31311:CDS
AATTATTAGGCAGCCGAAGT+GGG 0.527035 2.3:-7706035 MS.gene31311:CDS
GTGAAGGCAGTGGCTGAGGC+GGG 0.529435 2.3:-7707437 MS.gene31311:CDS
ACAAACATTGATGCTCCATC+CGG 0.530955 2.3:-7704083 MS.gene31311:CDS
CTTATTCAGAAATCAAAAGA+TGG 0.532459 2.3:-7707977 MS.gene31311:CDS
TCAGTTCGGAACTTAATCCC+TGG 0.533302 2.3:+7707257 None:intergenic
ACAGTGGGAGCAGGGATCAC+CGG 0.533430 2.3:-7704483 MS.gene31311:CDS
CCAGTTGTGATTGACTTCAC+GGG 0.533655 2.3:-7704053 MS.gene31311:CDS
CATGAGATCGACAATCTTAG+CGG 0.533942 2.3:+7707124 None:intergenic
GTTGCATGAGTCTGTGCAAT+CGG 0.533957 2.3:+7703956 None:intergenic
TGCAGTTTACGAAGGCATGA+AGG 0.534187 2.3:+7705004 None:intergenic
ACCAAATGTCACATGAATTG+TGG 0.534217 2.3:-7703912 MS.gene31311:CDS
GCCAGTACTTCGGTCAAAGT+TGG 0.534915 2.3:+7706242 None:intergenic
ACATGAACCTGTTAAAGGCC+AGG 0.536626 2.3:-7707915 MS.gene31311:intron
GAATTATTAGGCAGCCGAAG+TGG 0.536927 2.3:-7706036 MS.gene31311:CDS
GGATCAAGAAGTTGTAGTGT+TGG 0.537164 2.3:-7702933 MS.gene31311:CDS
GTTGATCTTATGGATGATCC+TGG 0.539602 2.3:-7705066 MS.gene31311:CDS
GCATTTGAAGCAACATATGT+AGG 0.542208 2.3:+7703978 None:intergenic
CCTTGTACCAAATCAACGGT+TGG 0.544937 2.3:+7704225 None:intergenic
CAGGCGGCAGTTTATAAGAC+AGG 0.545447 2.3:-7705712 MS.gene31311:CDS
ACCGGTCCCGTGATATTGAA+AGG 0.545966 2.3:-7704465 MS.gene31311:CDS
ATTCATATCACTTGCCAGCA+TGG 0.546767 2.3:-7705621 MS.gene31311:CDS
TCCACAAGTCTATTTGAGGT+GGG 0.546792 2.3:+7703641 None:intergenic
TTGATCTCTCCTCTCAGAAG+TGG 0.549836 2.3:-7704419 MS.gene31311:CDS
ACCTTTCAATATCACGGGAC+CGG 0.551865 2.3:+7704464 None:intergenic
TGTGAAGGCAGTGGCTGAGG+CGG 0.556040 2.3:-7707438 MS.gene31311:CDS
TGATTTACCAGCAGAACCAT+AGG 0.557167 2.3:+7706917 None:intergenic
CACAAACATATGGACCAATC+CGG 0.557177 2.3:+7707399 None:intergenic
GGTCAAAGTTGGTTCCTCCA+TGG 0.559035 2.3:+7706253 None:intergenic
ATGAAGATTAATACCTGCAA+TGG 0.560132 2.3:-7706672 MS.gene31311:intron
CTACCCTCGTAGTACTCCAC+AGG 0.568332 2.3:-7708107 MS.gene31311:intron
TGAATGGTCCGCCAGTACTT+CGG 0.575468 2.3:+7706232 None:intergenic
TGAAGGAAAGTATGAGAACC+AGG 0.577031 2.3:+7705048 None:intergenic
TATTGCTTCTGCAGCGTCCG+TGG 0.577381 2.3:+7703488 None:intergenic
ATTTGTGAAGGCAGTGGCTG+AGG 0.580633 2.3:-7707441 MS.gene31311:CDS
ACATGCGGAAACTTCTACCA+CGG 0.584028 2.3:-7703505 MS.gene31311:CDS
GGCCAAGCGATTCAATGTGA+AGG 0.589858 2.3:+7705031 None:intergenic
TCTTTAAGATGACCCCACTT+CGG 0.589909 2.3:+7706022 None:intergenic
ATTACCTTGTACCAAATCAA+CGG 0.590007 2.3:+7704221 None:intergenic
GCAGTTTACGAAGGCATGAA+GGG 0.590177 2.3:+7705005 None:intergenic
AATCACAACTGGATTACTGC+CGG 0.590293 2.3:+7704064 None:intergenic
GATAGGACTGTAAATTTCAG+TGG 0.591392 2.3:-7705646 MS.gene31311:CDS
AATTCTTAGGGAGTCAAACC+GGG 0.592065 2.3:-7704731 MS.gene31311:intron
ACCCACCTCAAATAGACTTG+TGG 0.593363 2.3:-7703642 MS.gene31311:CDS
ACAACTTCTTGATCCAATGC+AGG 0.595751 2.3:+7702941 None:intergenic
TTACGAAGGCATGAAGGGCA+TGG 0.596995 2.3:+7705010 None:intergenic
GGATTATGATCATAGAGCAT+TGG 0.599952 2.3:-7708173 MS.gene31311:CDS
CGAACCTGTGGGTATTTCGA+AGG 0.602509 2.3:-7705259 MS.gene31311:CDS
GGTCATTGATGGCAAACGTA+GGG 0.605518 2.3:-7708152 MS.gene31311:CDS
GATCTGCTGAGTTTAACAGT+TGG 0.607244 2.3:-7704642 MS.gene31311:CDS
CACGGGGATGGGAAAAGGTG+AGG 0.608159 2.3:-7704036 MS.gene31311:CDS
AACACTTACAATGTCTGTGA+TGG 0.608501 2.3:+7703885 None:intergenic
AGTGAAATTTGTGAAGGCAG+TGG 0.608507 2.3:-7707447 MS.gene31311:CDS
TTCTCTTGGTCCAAACCTAG+AGG 0.608559 2.3:-7705939 MS.gene31311:intron
GGATTTAGTGAAATTTGTGA+AGG 0.609083 2.3:-7707453 MS.gene31311:CDS
GAAGATTTAGGTCTCTCTAG+TGG 0.612338 2.3:-7704290 MS.gene31311:CDS
TGTAGTGCTTAATACTGCAA+AGG 0.614668 2.3:-7705569 MS.gene31311:intron
CTGATAGAAGTGACTACTTG+TGG 0.616428 2.3:-7705188 MS.gene31311:CDS
CTAGTGGAAGTTCAGGAGCG+TGG 0.616541 2.3:-7704274 MS.gene31311:CDS
GGAATGAAGTGAAGCCAAAG+AGG 0.616620 2.3:+7707278 None:intergenic
TGCAAGCTTGCAGTTTACGA+AGG 0.616961 2.3:+7704996 None:intergenic
TGGGTTTCCTCACAGACCTG+TGG 0.617107 2.3:-7706467 MS.gene31311:CDS
GGAACCAAGATACAGAATCA+GGG 0.617716 2.3:-7703621 MS.gene31311:CDS
ACATTTGGAGACCCTTGTAG+AGG 0.618423 2.3:-7702897 MS.gene31311:CDS
AGTACTACGAGGGTAGTGAA+TGG 0.621688 2.3:+7708114 None:intergenic
GATTATGATTAGGACACTTG+AGG 0.623557 2.3:+7703575 None:intergenic
GAATGAAGTGAAGCCAAAGA+GGG 0.625466 2.3:+7707279 None:intergenic
AGACAAACCTAAGCTTAATG+TGG 0.625480 2.3:-7704703 MS.gene31311:CDS
ACAACTGGATTACTGCCGGA+TGG 0.627916 2.3:+7704068 None:intergenic
ATTCAGAAATCAAAAGATGG+AGG 0.629580 2.3:-7707974 MS.gene31311:CDS
GAGTTGGATAAACGAACCTG+TGG 0.630510 2.3:-7705271 MS.gene31311:CDS
AACTTTGACCGAAGTACTGG+CGG 0.630915 2.3:-7706240 MS.gene31311:CDS
TGGTCATTGATGGCAAACGT+AGG 0.633375 2.3:-7708153 MS.gene31311:CDS
CAGTTGTGATTGACTTCACG+GGG 0.639490 2.3:-7704052 MS.gene31311:CDS
AAGATGCTCACAGACCATGC+TGG 0.640189 2.3:+7705607 None:intergenic
GGACTGAAAATTGGAGTGCA+TGG 0.640312 2.3:-7706599 MS.gene31311:intron
GGACACTTGAGGAACAGTGC+AGG 0.642369 2.3:+7703586 None:intergenic
TTTGTGCTGAATGGAACTAT+GGG 0.643438 2.3:-7707382 MS.gene31311:intron
ATTATTAGGCAGCCGAAGTG+GGG 0.644195 2.3:-7706034 MS.gene31311:CDS
TCATCCTTCGAAATACCCAC+AGG 0.647345 2.3:+7705255 None:intergenic
GCTTGCTGACACATGACCCA+AGG 0.647657 2.3:+7706846 None:intergenic
CAAGCTATGGAACACCACTA+GGG 0.651106 2.3:-7703528 MS.gene31311:CDS
AAGTTTCCGCATGTCCCTAG+TGG 0.652981 2.3:+7703514 None:intergenic
TGCTGCCTTTCTCGCCAACG+TGG 0.653156 2.3:-7705680 MS.gene31311:CDS
GAACCAAGATACAGAATCAG+GGG 0.654289 2.3:-7703620 MS.gene31311:CDS
TCTATGATCATAATCCACAT+TGG 0.654567 2.3:+7708180 None:intergenic
GCAAATGCGAGATCTTCCAC+AGG 0.659001 2.3:+7706451 None:intergenic
GGAACACCACTAGGGACATG+CGG 0.667083 2.3:-7703520 MS.gene31311:CDS
CTGATATGTCCACTTCTGAG+AGG 0.670032 2.3:+7704410 None:intergenic
GAGAAACTGTATGCATCACA+AGG 0.684935 2.3:-7707095 MS.gene31311:CDS
ATCAGATTTAGAGTCCACGT+TGG 0.692024 2.3:+7705666 None:intergenic
AGATCTTCCACAGGTCTGTG+AGG 0.697656 2.3:+7706460 None:intergenic
AAACCTGTGGAGTACTACGA+GGG 0.699533 2.3:+7708104 None:intergenic
ACAGACTCATGCAACTACAG+AGG 0.715275 2.3:-7703948 MS.gene31311:CDS
TCTTTGGCACTCCTCTACAA+GGG 0.721168 2.3:+7702886 None:intergenic
GTATTGTTTGAGGAAAGTGG+TGG 0.725658 2.3:-7703733 MS.gene31311:CDS
AGTTGGATAAACGAACCTGT+GGG 0.726289 2.3:-7705270 MS.gene31311:CDS
AAACTGTATGCATCACAAGG+AGG 0.756026 2.3:-7707092 MS.gene31311:CDS
AAAACCTGTGGAGTACTACG+AGG 0.762053 2.3:+7708103 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATGTGTATTATATTT+CGG - chr2.3:7703681-7703700 MS.gene31311:CDS 10.0%
!!! ATATATTTTTGAAGATATTA+AGG - chr2.3:7704008-7704027 MS.gene31311:CDS 10.0%
!! AACATTTCAAAATTACTATA+TGG - chr2.3:7704628-7704647 MS.gene31311:intron 15.0%
!! ACTAAAATTATCTTATTAAC+AGG - chr2.3:7708065-7708084 MS.gene31311:intron 15.0%
!! ATATTATTGATGAATTCTTA+GGG - chr2.3:7706286-7706305 MS.gene31311:intron 15.0%
!! ATTTACAAAAGATAAAACAA+AGG + chr2.3:7703400-7703419 None:intergenic 15.0%
!! ATTTATGTGTATTATATTTC+GGG - chr2.3:7703682-7703701 MS.gene31311:CDS 15.0%
!! TATAATTCATTGAAATGAAA+TGG - chr2.3:7703523-7703542 MS.gene31311:CDS 15.0%
!!! ATATGTTTTATTATCTATCT+TGG + chr2.3:7703356-7703375 None:intergenic 15.0%
!!! CAATAAATTATCAACATTTT+TGG + chr2.3:7706224-7706243 None:intergenic 15.0%
!!! TTGATCATGAATTTTTTTTT+TGG - chr2.3:7706171-7706190 MS.gene31311:intron 15.0%
!! AAAACCTGAGATAAAATTAT+AGG + chr2.3:7703964-7703983 None:intergenic 20.0%
!! AAATTTCAATATAAACCTCT+AGG + chr2.3:7705108-7705127 None:intergenic 20.0%
!! GATATTATTGATGAATTCTT+AGG - chr2.3:7706285-7706304 MS.gene31311:intron 20.0%
!! TAATGAAGATACATTGTTAA+TGG - chr2.3:7706681-7706700 MS.gene31311:intron 20.0%
!! TAATTTGATATGTTTCACTT+TGG - chr2.3:7707615-7707634 MS.gene31311:intron 20.0%
!! TTTATGTGTATTATATTTCG+GGG - chr2.3:7703683-7703702 MS.gene31311:CDS 20.0%
!!! ATATTCTGAAAGTTTTAAAG+AGG - chr2.3:7706088-7706107 MS.gene31311:intron 20.0%
!!! ATCATGAATTTTTTTTTTGG+AGG - chr2.3:7706174-7706193 MS.gene31311:intron 20.0%
!!! ATGTCTACGTTAATTTTTTT+TGG - chr2.3:7704244-7704263 MS.gene31311:CDS 20.0%
!!! CGTTAATTTTTTTTGGTTTA+TGG - chr2.3:7704251-7704270 MS.gene31311:CDS 20.0%
!!! TCATGAATTTTTTTTTTGGA+GGG - chr2.3:7706175-7706194 MS.gene31311:intron 20.0%
! AACAATAGATTTCAGTATGA+AGG + chr2.3:7704880-7704899 None:intergenic 25.0%
! ATAAATTATATCCTAAGACG+CGG + chr2.3:7705154-7705173 None:intergenic 25.0%
! ATATTGAAAGGTTTGAAGAA+TGG - chr2.3:7706576-7706595 MS.gene31311:intron 25.0%
! CAAAGAATTCAAGTAAGATT+TGG + chr2.3:7704515-7704534 None:intergenic 25.0%
! CAAATCTTACTTGAATTCTT+TGG - chr2.3:7704513-7704532 MS.gene31311:intron 25.0%
! CTTATTCAGAAATCAAAAGA+TGG - chr2.3:7703052-7703071 MS.gene31311:intron 25.0%
! GAAACATATCAAATTAGCAA+GGG + chr2.3:7707611-7707630 None:intergenic 25.0%
! GAAGAAGATAAATTGACAAT+TGG - chr2.3:7704940-7704959 MS.gene31311:intron 25.0%
! TAAAGTAGTTTATCCAAACA+TGG - chr2.3:7703469-7703488 MS.gene31311:CDS 25.0%
! TGAAACATATCAAATTAGCA+AGG + chr2.3:7707612-7707631 None:intergenic 25.0%
! TGGTAAATCATACATCAATT+GGG - chr2.3:7704125-7704144 MS.gene31311:intron 25.0%
! TTAAGTGAACTTAGATTCAA+GGG + chr2.3:7703849-7703868 None:intergenic 25.0%
! TTATGTGTATTATATTTCGG+GGG - chr2.3:7703684-7703703 MS.gene31311:CDS 25.0%
!! GATGATATATTGTCTAAAAC+TGG - chr2.3:7705792-7705811 MS.gene31311:intron 25.0%
!! GTTCACAAGTTCAATTTTAT+AGG - chr2.3:7704670-7704689 MS.gene31311:CDS 25.0%
!! TAAGATTTGATAACAGAGTT+TGG + chr2.3:7707833-7707852 None:intergenic 25.0%
!! TATTGGTTACTAAAGTAAGT+AGG - chr2.3:7705630-7705649 MS.gene31311:CDS 25.0%
!! TTAATTCTTTTGATACAGGT+TGG - chr2.3:7706706-7706725 MS.gene31311:intron 25.0%
!! TTTTCTATTGTTCAAGCATA+GGG + chr2.3:7707768-7707787 None:intergenic 25.0%
!! TTTTGTAACTAAAACTCATC+TGG - chr2.3:7705173-7705192 MS.gene31311:intron 25.0%
!! TTTTTGCAGTATGATTTTGA+TGG - chr2.3:7703547-7703566 MS.gene31311:CDS 25.0%
!!! ATCTTTTAAGATTCTTTCTC+TGG - chr2.3:7705203-7705222 MS.gene31311:CDS 25.0%
!!! CATCTTTTGATTTCTGAATA+AGG + chr2.3:7703054-7703073 None:intergenic 25.0%
!!! GTTTTATTATCTATCTTGGA+GGG + chr2.3:7703352-7703371 None:intergenic 25.0%
!!! TAGAAACTTCTAGTTCAAAA+TGG - chr2.3:7705736-7705755 MS.gene31311:intron 25.0%
!!! TGTTTTATTATCTATCTTGG+AGG + chr2.3:7703353-7703372 None:intergenic 25.0%
!!! TTTTGCAGTATGATTTTGAT+GGG - chr2.3:7703548-7703567 MS.gene31311:CDS 25.0%
!!! TTTTTGGTTTATGGTTTACT+AGG - chr2.3:7704260-7704279 MS.gene31311:CDS 25.0%
AACTGACAATGAACCATTTA+AGG - chr2.3:7703789-7703808 MS.gene31311:intron 30.0%
AACTTACATGAACCTGTTAA+AGG - chr2.3:7703109-7703128 MS.gene31311:intron 30.0%
AACTTCGTAACTGAAGATAT+CGG - chr2.3:7705708-7705727 MS.gene31311:CDS 30.0%
AATGCAATGCTGAAAGAAAA+TGG + chr2.3:7703174-7703193 None:intergenic 30.0%
AATTAACCTATCTATAGCCA+GGG - chr2.3:7705597-7705616 MS.gene31311:CDS 30.0%
AGAGACATATATAAAACCTG+TGG + chr2.3:7702941-7702960 None:intergenic 30.0%
AGAGTAATGAGAGAAATCAT+TGG + chr2.3:7706473-7706492 None:intergenic 30.0%
AGGTAGGGAATTTCAAATTA+AGG - chr2.3:7706863-7706882 MS.gene31311:CDS 30.0%
ATGAAGATTAATACCTGCAA+TGG - chr2.3:7704357-7704376 MS.gene31311:intron 30.0%
ATGTAAGTTCCAGAAAACAT+AGG + chr2.3:7703098-7703117 None:intergenic 30.0%
ATTACCTTGTACCAAATCAA+CGG + chr2.3:7706811-7706830 None:intergenic 30.0%
ATTCAGAAATCAAAAGATGG+AGG - chr2.3:7703055-7703074 MS.gene31311:intron 30.0%
CAAAACATAAAACCTACGAT+TGG + chr2.3:7704222-7704241 None:intergenic 30.0%
CTAAAACAAAGCCAAAAATG+TGG - chr2.3:7704409-7704428 MS.gene31311:intron 30.0%
CTGGTAAATCATACATCAAT+TGG - chr2.3:7704124-7704143 MS.gene31311:intron 30.0%
CTTCAAACCTTTCAATATCA+CGG + chr2.3:7706574-7706593 None:intergenic 30.0%
GAGATTACCTGATTATGATT+AGG + chr2.3:7707467-7707486 None:intergenic 30.0%
GGATTTAGTGAAATTTGTGA+AGG - chr2.3:7703576-7703595 MS.gene31311:CDS 30.0%
GGTAGGGAATTTCAAATTAA+GGG - chr2.3:7706864-7706883 MS.gene31311:CDS 30.0%
GTCAAATAAGTCAATCCAAA+CGG + chr2.3:7703311-7703330 None:intergenic 30.0%
GTTAAGTGAACTTAGATTCA+AGG + chr2.3:7703850-7703869 None:intergenic 30.0%
GTTTCCAATTATGCATAGAA+TGG - chr2.3:7706438-7706457 MS.gene31311:CDS 30.0%
TAAATGGTTCATTGTCAGTT+CGG + chr2.3:7703789-7703808 None:intergenic 30.0%
TAATTAACCTATCTATAGCC+AGG - chr2.3:7705596-7705615 MS.gene31311:CDS 30.0%
TAGTTTACTGATATGTGAGT+AGG - chr2.3:7707667-7707686 MS.gene31311:intron 30.0%
TATAGGATAGTAGTACTTCA+CGG - chr2.3:7704687-7704706 MS.gene31311:CDS 30.0%
TATATGCTGCAGGAATTATT+AGG - chr2.3:7704981-7705000 MS.gene31311:intron 30.0%
TCAAATAAGTCAATCCAAAC+GGG + chr2.3:7703310-7703329 None:intergenic 30.0%
TCAATATAAACCTCTAGGTT+TGG + chr2.3:7705103-7705122 None:intergenic 30.0%
TCCATTAAATTTGCAAGCTA+TGG - chr2.3:7707488-7707507 MS.gene31311:intron 30.0%
TCTATGATCATAATCCACAT+TGG + chr2.3:7702852-7702871 None:intergenic 30.0%
TGAAGGTAACTTACCTTAAA+TGG + chr2.3:7703805-7703824 None:intergenic 30.0%
TGAATCTAAGTTCACTTAAC+AGG - chr2.3:7703850-7703869 MS.gene31311:intron 30.0%
TGACAGATAGAAAATGAGTA+TGG - chr2.3:7704075-7704094 MS.gene31311:CDS 30.0%
TTAAACTCAGCAGATCAATT+TGG + chr2.3:7706383-7706402 None:intergenic 30.0%
TTAGTATGTTACAACAACTC+TGG + chr2.3:7708050-7708069 None:intergenic 30.0%
TTATTGTTTCCCTTGATACA+AGG - chr2.3:7706843-7706862 MS.gene31311:CDS 30.0%
TTCAAACCTTTCAATATCAC+GGG + chr2.3:7706573-7706592 None:intergenic 30.0%
TTCCAGAAATTACTGTGATT+GGG + chr2.3:7706356-7706375 None:intergenic 30.0%
TTGCAGGTAATTTATTCACT+AGG - chr2.3:7706051-7706070 MS.gene31311:intron 30.0%
TTTCCAGAAATTACTGTGAT+TGG + chr2.3:7706357-7706376 None:intergenic 30.0%
TTTGGGGAATTAACTAGATT+AGG - chr2.3:7705266-7705285 MS.gene31311:CDS 30.0%
! AATGGCAGGTATCTTTTATT+TGG - chr2.3:7704536-7704555 MS.gene31311:intron 30.0%
! AGGACCTATAATTTTATCTC+AGG - chr2.3:7703957-7703976 MS.gene31311:CDS 30.0%
! ATACTAAGATTGCTCTTTTC+TGG + chr2.3:7704297-7704316 None:intergenic 30.0%
! ATCAAGAAGTACAGAATCAT+CGG + chr2.3:7705916-7705935 None:intergenic 30.0%
! CAAAAATGTGGACTGAAAAT+TGG - chr2.3:7704421-7704440 MS.gene31311:CDS 30.0%
! CAATTTTCAGTCCACATTTT+TGG + chr2.3:7704423-7704442 None:intergenic 30.0%
! CTTACTTGAATTCTTTGGAA+TGG - chr2.3:7704518-7704537 MS.gene31311:intron 30.0%
! GGAGTTAATTCTTTTGATAC+AGG - chr2.3:7706702-7706721 MS.gene31311:intron 30.0%
! GTTTTCTATTGTTCAAGCAT+AGG + chr2.3:7707769-7707788 None:intergenic 30.0%
! TCATAACTTGTAGCAATGAA+TGG + chr2.3:7704816-7704835 None:intergenic 30.0%
! TCATTGAAACCTATGTTTTC+TGG - chr2.3:7703086-7703105 MS.gene31311:intron 30.0%
! TCCATAGCTTGCAAATTTAA+TGG + chr2.3:7707492-7707511 None:intergenic 30.0%
! TTGAATTTGTTCATGTGTGA+AGG - chr2.3:7703192-7703211 MS.gene31311:intron 30.0%
! TTTGATTTCTGAATAAGGTC+TGG + chr2.3:7703049-7703068 None:intergenic 30.0%
!! TGACATTTGGTTTGAGTAAA+AGG + chr2.3:7707108-7707127 None:intergenic 30.0%
!! TTGTAAAGAAGGTGTTTATC+TGG - chr2.3:7707576-7707595 MS.gene31311:intron 30.0%
!!! CAAATCTTAGTTTTTTCCGT+TGG - chr2.3:7707844-7707863 MS.gene31311:intron 30.0%
!!! TTTGGCTTTGTTTTAGAGTT+TGG + chr2.3:7704405-7704424 None:intergenic 30.0%
!!! TTTTTCCGTTGGTTTTAAAG+TGG - chr2.3:7707855-7707874 MS.gene31311:intron 30.0%
AAATTCCCTACCTTGTATCA+AGG + chr2.3:7706856-7706875 None:intergenic 35.0%
AACACTTACAATGTCTGTGA+TGG + chr2.3:7707147-7707166 None:intergenic 35.0%
AAGCAACATAACACGAATGA+GGG + chr2.3:7705495-7705514 None:intergenic 35.0%
AATTCCCTACCTTGTATCAA+GGG + chr2.3:7706855-7706874 None:intergenic 35.0%
ACCAAATGTCACATGAATTG+TGG - chr2.3:7707117-7707136 MS.gene31311:CDS 35.0%
ACCAATAAGATAAAACACCC+TGG + chr2.3:7705617-7705636 None:intergenic 35.0%
ACTACTTGTGGTACTCATTA+AGG - chr2.3:7705853-7705872 MS.gene31311:intron 35.0%
AGACAAACCTAAGCTTAATG+TGG - chr2.3:7706326-7706345 MS.gene31311:intron 35.0%
ATAAAACCTACGATTGGATC+AGG + chr2.3:7704216-7704235 None:intergenic 35.0%
ATCCCAATCACAGTAATTTC+TGG - chr2.3:7706351-7706370 MS.gene31311:intron 35.0%
ATCGTACCATACTCATCAAT+CGG + chr2.3:7704849-7704868 None:intergenic 35.0%
ATGGAACTATGGGTAAAGTT+TGG - chr2.3:7703657-7703676 MS.gene31311:CDS 35.0%
CAACACTCTTGTATTGTTTG+AGG - chr2.3:7707286-7707305 MS.gene31311:CDS 35.0%
CAAGCCATTCTATGCATAAT+TGG + chr2.3:7706445-7706464 None:intergenic 35.0%
CAAGTGTCCTAATCATAATC+AGG - chr2.3:7707457-7707476 MS.gene31311:CDS 35.0%
CTAGTTAATTCCCCAAATAG+AGG + chr2.3:7705263-7705282 None:intergenic 35.0%
CTGAAACTCAAATGAAGTCA+AGG - chr2.3:7706119-7706138 MS.gene31311:intron 35.0%
CTTGTATTGTTTGAGGAAAG+TGG - chr2.3:7707293-7707312 MS.gene31311:intron 35.0%
GAACTTGTGAACAACATTTC+AGG + chr2.3:7704662-7704681 None:intergenic 35.0%
GATAGGACTGTAAATTTCAG+TGG - chr2.3:7705383-7705402 MS.gene31311:intron 35.0%
GATTATGATTAGGACACTTG+AGG + chr2.3:7707457-7707476 None:intergenic 35.0%
GATTTCAGTATGAAGGTTGA+AGG + chr2.3:7704873-7704892 None:intergenic 35.0%
GGATTATGATCATAGAGCAT+TGG - chr2.3:7702856-7702875 MS.gene31311:CDS 35.0%
GTAATGAGAGAAATCATTGG+AGG + chr2.3:7706470-7706489 None:intergenic 35.0%
GTAGTACTTCACGGAAAAAT+TGG - chr2.3:7704696-7704715 MS.gene31311:CDS 35.0%
GTTGTCGTTGTTTATAGATG+TGG - chr2.3:7703023-7703042 MS.gene31311:intron 35.0%
TAAATTAAGCAGACAGAACC+TGG + chr2.3:7703135-7703154 None:intergenic 35.0%
TACCAGTGTTGTATTTGTGA+TGG + chr2.3:7704913-7704932 None:intergenic 35.0%
TACCGTCTAAGTTGTACTTA+CGG - chr2.3:7707972-7707991 MS.gene31311:CDS 35.0%
TAGTAGATCAAGACCATGTT+TGG + chr2.3:7703485-7703504 None:intergenic 35.0%
TATCAAATTAGCAAGGGAAC+AGG + chr2.3:7707605-7707624 None:intergenic 35.0%
TCCACAATTCATGTGACATT+TGG + chr2.3:7707121-7707140 None:intergenic 35.0%
TGGTTTAGATCGACTATGTT+GGG - chr2.3:7707635-7707654 MS.gene31311:intron 35.0%
TGTAGGGACATTTGATATGA+TGG + chr2.3:7707946-7707965 None:intergenic 35.0%
TGTAGTGCTTAATACTGCAA+AGG - chr2.3:7705460-7705479 MS.gene31311:intron 35.0%
TTAGACGGTAAAACACTGTA+GGG + chr2.3:7707962-7707981 None:intergenic 35.0%
TTCCATTCAGCACAAACATA+TGG + chr2.3:7703643-7703662 None:intergenic 35.0%
TTGGTTTAGATCGACTATGT+TGG - chr2.3:7707634-7707653 MS.gene31311:intron 35.0%
TTTGTAGACGTAGACACAAT+TGG - chr2.3:7707807-7707826 MS.gene31311:intron 35.0%
TTTGTGCTGAATGGAACTAT+GGG - chr2.3:7703647-7703666 MS.gene31311:CDS 35.0%
! AAATCAACGGTTGGTTCTTA+GGG + chr2.3:7706798-7706817 None:intergenic 35.0%
! ATATCTTTGCTATATGCTGC+AGG - chr2.3:7704971-7704990 MS.gene31311:intron 35.0%
! CATGGTCTTGATCTACTATA+AGG - chr2.3:7703487-7703506 MS.gene31311:CDS 35.0%
! GACCTAAATCTTCACCTTTT+AGG + chr2.3:7706732-7706751 None:intergenic 35.0%
! GCATTTGAAGCAACATATGT+AGG + chr2.3:7707054-7707073 None:intergenic 35.0%
! GGAGTATCAACTGATACATT+TGG - chr2.3:7708117-7708136 MS.gene31311:CDS 35.0%
! TCTTTTACTATTTGAACCGC+AGG - chr2.3:7705298-7705317 MS.gene31311:CDS 35.0%
! TTTGGTTTCAAAAACGATCG+TGG + chr2.3:7707263-7707282 None:intergenic 35.0%
!! AGGTATCTTTTATTTGGTGG+TGG - chr2.3:7704542-7704561 MS.gene31311:intron 35.0%
!! CTTCTAGTTCAAAATGGAGT+TGG - chr2.3:7705742-7705761 MS.gene31311:intron 35.0%
!! GCTAACCACTTTAAAACCAA+CGG + chr2.3:7707863-7707882 None:intergenic 35.0%
!! GGTATCTTTTATTTGGTGGT+GGG - chr2.3:7704543-7704562 MS.gene31311:intron 35.0%
!!! CGATCGTTTTTGAAACCAAA+CGG - chr2.3:7707263-7707282 MS.gene31311:CDS 35.0%
!!! CTTTTGAAGCGTTGATCTTA+TGG - chr2.3:7705953-7705972 MS.gene31311:CDS 35.0%
!!! GTTGGTTTTAAAGTGGTTAG+CGG - chr2.3:7707862-7707881 MS.gene31311:intron 35.0%
AAAACACCCTGGCTATAGAT+AGG + chr2.3:7705606-7705625 None:intergenic 40.0%
AAACGTAGGGTCTTGATTTC+TGG - chr2.3:7702890-7702909 MS.gene31311:CDS 40.0%
AAACTGTATGCATCACAAGG+AGG - chr2.3:7703937-7703956 MS.gene31311:CDS 40.0%
AACATCTTATTCCGCGTCTT+AGG - chr2.3:7705140-7705159 MS.gene31311:intron 40.0%
AAGTACAGAATCATCGGTCA+GGG + chr2.3:7705910-7705929 None:intergenic 40.0%
AATAGAGGTTGTGGCAACAT+TGG + chr2.3:7705248-7705267 None:intergenic 40.0%
AATCACAACTGGATTACTGC+CGG + chr2.3:7706968-7706987 None:intergenic 40.0%
AATTATTAGGCAGCCGAAGT+GGG - chr2.3:7704994-7705013 MS.gene31311:intron 40.0%
AATTCCCCAAATAGAGGTTG+TGG + chr2.3:7705257-7705276 None:intergenic 40.0%
AATTCTTAGGGAGTCAAACC+GGG - chr2.3:7706298-7706317 MS.gene31311:intron 40.0%
ACAAACATTGATGCTCCATC+CGG - chr2.3:7706946-7706965 MS.gene31311:CDS 40.0%
ACAACTTCTTGATCCAATGC+AGG + chr2.3:7708091-7708110 None:intergenic 40.0%
ACAGAATCAGGGGAAAAAGT+AGG - chr2.3:7707419-7707438 MS.gene31311:CDS 40.0%
ACCGTCTAAGTTGTACTTAC+GGG - chr2.3:7707973-7707992 MS.gene31311:CDS 40.0%
ACGTGGACTCTAAATCTGAT+AGG - chr2.3:7705366-7705385 MS.gene31311:intron 40.0%
AGCACTACATTCTTGCAATC+TGG + chr2.3:7705449-7705468 None:intergenic 40.0%
AGCCATCACAAATACAACAC+TGG - chr2.3:7704908-7704927 MS.gene31311:intron 40.0%
AGTGAAATTTGTGAAGGCAG+TGG - chr2.3:7703582-7703601 MS.gene31311:CDS 40.0%
AGTTGGATAAACGAACCTGT+GGG - chr2.3:7705759-7705778 MS.gene31311:intron 40.0%
ATCGCAGTAAAATCCATTGC+AGG + chr2.3:7704373-7704392 None:intergenic 40.0%
ATGGCTACATCTCTTGATAC+AGG - chr2.3:7704156-7704175 MS.gene31311:intron 40.0%
ATGTTGCCACAACCTCTATT+TGG - chr2.3:7705248-7705267 MS.gene31311:CDS 40.0%
ATTCATATCACTTGCCAGCA+TGG - chr2.3:7705408-7705427 MS.gene31311:intron 40.0%
CAAAAAAGGCTCCATAGTTC+TGG + chr2.3:7706524-7706543 None:intergenic 40.0%
CAAATGCACAATGGTTGTAG+TGG + chr2.3:7707791-7707810 None:intergenic 40.0%
CACAAACATATGGACCAATC+CGG + chr2.3:7703633-7703652 None:intergenic 40.0%
CAGAATCAGGGGAAAAAGTA+GGG - chr2.3:7707420-7707439 MS.gene31311:CDS 40.0%
CATCAATTGGGCAGCAAAAA+TGG - chr2.3:7704137-7704156 MS.gene31311:intron 40.0%
CATGAGATCGACAATCTTAG+CGG + chr2.3:7703908-7703927 None:intergenic 40.0%
CTACGTCTACAAATGCACAA+TGG + chr2.3:7707800-7707819 None:intergenic 40.0%
CTGATAGAAGTGACTACTTG+TGG - chr2.3:7705841-7705860 MS.gene31311:intron 40.0%
CTTAACAGGAAACTGTCTTC+AGG - chr2.3:7703864-7703883 MS.gene31311:intron 40.0%
CTTAGACGGTAAAACACTGT+AGG + chr2.3:7707963-7707982 None:intergenic 40.0%
CTTAGGTTTGTCTTTGTTCC+CGG + chr2.3:7706319-7706338 None:intergenic 40.0%
GAAAAGTTTGCATTGCTTGC+AGG - chr2.3:7703214-7703233 MS.gene31311:intron 40.0%
GAACCAAGATACAGAATCAG+GGG - chr2.3:7707409-7707428 MS.gene31311:CDS 40.0%
GAACCCAAGATTACTTCTCT+TGG - chr2.3:7705076-7705095 MS.gene31311:intron 40.0%
GAAGATTTAGGTCTCTCTAG+TGG - chr2.3:7706739-7706758 MS.gene31311:intron 40.0%
GAAGCAACATAACACGAATG+AGG + chr2.3:7705496-7705515 None:intergenic 40.0%
GAATGAAGTGAAGCCAAAGA+GGG + chr2.3:7703753-7703772 None:intergenic 40.0%
GAATTCTTAGGGAGTCAAAC+CGG - chr2.3:7706297-7706316 MS.gene31311:intron 40.0%
GAGAAACTGTATGCATCACA+AGG - chr2.3:7703934-7703953 MS.gene31311:CDS 40.0%
GAGTTTAACAGTTGGACTTC+AGG - chr2.3:7706395-7706414 MS.gene31311:intron 40.0%
GATCTGCTGAGTTTAACAGT+TGG - chr2.3:7706387-7706406 MS.gene31311:intron 40.0%
GCTTCAACAGCTAAACTCTT+TGG + chr2.3:7708162-7708181 None:intergenic 40.0%
GGAACCAAGATACAGAATCA+GGG - chr2.3:7707408-7707427 MS.gene31311:CDS 40.0%
GGACCAAGAGAAGTAATCTT+GGG + chr2.3:7705082-7705101 None:intergenic 40.0%
GGATCAAGAAGTTGTAGTGT+TGG - chr2.3:7708096-7708115 MS.gene31311:intron 40.0%
GGCCTAAAAGGTGAAGATTT+AGG - chr2.3:7706727-7706746 MS.gene31311:intron 40.0%
GGCGATGTCAATTGTAAAGA+AGG - chr2.3:7707565-7707584 MS.gene31311:intron 40.0%
GTACATGGTATCTGTGAGAT+GGG + chr2.3:7707241-7707260 None:intergenic 40.0%
GTAGCAAAAGCTATTTGCGT+TGG + chr2.3:7707326-7707345 None:intergenic 40.0%
GTATTGTTTGAGGAAAGTGG+TGG - chr2.3:7707296-7707315 MS.gene31311:intron 40.0%
GTCCATATGTTTGTGCTGAA+TGG - chr2.3:7703638-7703657 MS.gene31311:CDS 40.0%
GTTGATCTTATGGATGATCC+TGG - chr2.3:7705963-7705982 MS.gene31311:CDS 40.0%
GTTTCCCTTGATACAAGGTA+GGG - chr2.3:7706848-7706867 MS.gene31311:CDS 40.0%
GTTTGTGCTGAATGGAACTA+TGG - chr2.3:7703646-7703665 MS.gene31311:CDS 40.0%
TAGATCGACTATGTTGGGTA+TGG - chr2.3:7707640-7707659 MS.gene31311:intron 40.0%
TAGTGCAACATGTGTCACAT+CGG + chr2.3:7706925-7706944 None:intergenic 40.0%
TCAAAAACGATCGTGGTACA+TGG + chr2.3:7707256-7707275 None:intergenic 40.0%
TCCCGTAAGTACAACTTAGA+CGG + chr2.3:7707977-7707996 None:intergenic 40.0%
TCTTATTAACAGGCCTGCAT+TGG - chr2.3:7708075-7708094 MS.gene31311:intron 40.0%
TCTTGATACAGGTGTTCCTT+GGG - chr2.3:7704167-7704186 MS.gene31311:intron 40.0%
TGATTTACCAGCAGAACCAT+AGG + chr2.3:7704115-7704134 None:intergenic 40.0%
TGCTTCTTCACAGAGCTTTA+TGG + chr2.3:7705044-7705063 None:intergenic 40.0%
TGGAACCAAGATACAGAATC+AGG - chr2.3:7707407-7707426 MS.gene31311:CDS 40.0%
TGGACCAAGAGAAGTAATCT+TGG + chr2.3:7705083-7705102 None:intergenic 40.0%
TGGGTAAATGGACAAAGCAT+TGG - chr2.3:7707018-7707037 MS.gene31311:intron 40.0%
TGGTTCCACAAGTCTATTTG+AGG + chr2.3:7707395-7707414 None:intergenic 40.0%
TGTTGCCACAACCTCTATTT+GGG - chr2.3:7705249-7705268 MS.gene31311:CDS 40.0%
TGTTTCCCTTGATACAAGGT+AGG - chr2.3:7706847-7706866 MS.gene31311:CDS 40.0%
TTCCACAAGTCTATTTGAGG+TGG + chr2.3:7707392-7707411 None:intergenic 40.0%
TTCCTTCACATTGAATCGCT+TGG - chr2.3:7705996-7706015 MS.gene31311:CDS 40.0%
TTTACTATTTGAACCGCAGG+CGG - chr2.3:7705301-7705320 MS.gene31311:CDS 40.0%
TTTCCCCTGATTCTGTATCT+TGG + chr2.3:7707415-7707434 None:intergenic 40.0%
! AACACATTTCTAGACCCGTT+TGG - chr2.3:7703293-7703312 MS.gene31311:intron 40.0%
! ATCAGATTTAGAGTCCACGT+TGG + chr2.3:7705366-7705385 None:intergenic 40.0%
! CAAATCAACGGTTGGTTCTT+AGG + chr2.3:7706799-7706818 None:intergenic 40.0%
! CTAAGAACCAACCGTTGATT+TGG - chr2.3:7706797-7706816 MS.gene31311:intron 40.0%
! GGACTTTAACTTCTTGACAG+TGG - chr2.3:7703724-7703743 MS.gene31311:CDS 40.0%
! GGCAAAAGCATAAAGCACTA+GGG + chr2.3:7703828-7703847 None:intergenic 40.0%
! GGGTAAATGGACAAAGCATT+GGG - chr2.3:7707019-7707038 MS.gene31311:intron 40.0%
! TCCACAAGTCTATTTGAGGT+GGG + chr2.3:7707391-7707410 None:intergenic 40.0%
! TCCAGTTGTGATTGACTTCA+CGG - chr2.3:7706975-7706994 MS.gene31311:intron 40.0%
! TGAAGGAAAGTATGAGAACC+AGG + chr2.3:7705984-7706003 None:intergenic 40.0%
! TTTGAAATGTTCCACCTCGT+TGG + chr2.3:7704619-7704638 None:intergenic 40.0%
! TTTGGCTTCACTTCATTCCA+GGG - chr2.3:7703755-7703774 MS.gene31311:CDS 40.0%
!! AATACAAGAGTGTTGCCGTT+TGG + chr2.3:7707281-7707300 None:intergenic 40.0%
!! ACGGAAAAATTGGCTCTAAG+AGG - chr2.3:7704706-7704725 MS.gene31311:CDS 40.0%
!! ATTGCTCTTTTCTGGAAGAC+AGG + chr2.3:7704289-7704308 None:intergenic 40.0%
!! CATAGAGCATTGGTCATTGA+TGG - chr2.3:7702866-7702885 MS.gene31311:CDS 40.0%
!! CTTGAATTCTTTGGAATGGC+AGG - chr2.3:7704522-7704541 MS.gene31311:intron 40.0%
!! GCCAGGGTGTTTTATCTTAT+TGG - chr2.3:7705613-7705632 MS.gene31311:CDS 40.0%
!! GGCAGGTATCTTTTATTTGG+TGG - chr2.3:7704539-7704558 MS.gene31311:intron 40.0%
!! GTATGATTTTGATGGGAGGA+AGG - chr2.3:7703555-7703574 MS.gene31311:CDS 40.0%
!! TCTTTAAGATGACCCCACTT+CGG + chr2.3:7705010-7705029 None:intergenic 40.0%
!! TGCAGTATGATTTTGATGGG+AGG - chr2.3:7703551-7703570 MS.gene31311:CDS 40.0%
!! TTGATACAGGTTGGCCTAAA+AGG - chr2.3:7706715-7706734 MS.gene31311:intron 40.0%
AAAGGTGAGGCTTGGGTAAA+TGG - chr2.3:7707006-7707025 MS.gene31311:intron 45.0%
ACACACTATGTGCAGAGAAG+TGG - chr2.3:7707895-7707914 MS.gene31311:intron 45.0%
ACAGACTCATGCAACTACAG+AGG - chr2.3:7707081-7707100 MS.gene31311:CDS 45.0%
ACATGAACCTGTTAAAGGCC+AGG - chr2.3:7703114-7703133 MS.gene31311:intron 45.0%
ACATGCGGAAACTTCTACCA+CGG - chr2.3:7707524-7707543 MS.gene31311:intron 45.0%
ACATTTGGAGACCCTTGTAG+AGG - chr2.3:7708132-7708151 MS.gene31311:CDS 45.0%
ACCAACTTTGACCGAAGTAC+TGG - chr2.3:7704786-7704805 MS.gene31311:intron 45.0%
ACCCACCTCAAATAGACTTG+TGG - chr2.3:7707387-7707406 MS.gene31311:CDS 45.0%
ACCTTTCAATATCACGGGAC+CGG + chr2.3:7706568-7706587 None:intergenic 45.0%
AGCGGTGAATCGCTTCATTT+CGG + chr2.3:7703890-7703909 None:intergenic 45.0%
AGTACTACGAGGGTAGTGAA+TGG + chr2.3:7702918-7702937 None:intergenic 45.0%
ATTATTAGGCAGCCGAAGTG+GGG - chr2.3:7704995-7705014 MS.gene31311:CDS 45.0%
CAAATATCTTTCGGACGTGG+AGG + chr2.3:7705887-7705906 None:intergenic 45.0%
CAAGCTATGGAACACCACTA+GGG - chr2.3:7707501-7707520 MS.gene31311:intron 45.0%
CAGAAGTGGACATATCAGGT+CGG - chr2.3:7706624-7706643 MS.gene31311:CDS 45.0%
CCATTTGCACACCAGAACTA+TGG - chr2.3:7706510-7706529 MS.gene31311:intron 45.0%
CCTGCTCAAAAACAGTACCA+TGG - chr2.3:7704759-7704778 MS.gene31311:intron 45.0%
CCTTGTACCAAATCAACGGT+TGG + chr2.3:7706807-7706826 None:intergenic 45.0%
CGGTCAGGGCAAATATCTTT+CGG + chr2.3:7705896-7705915 None:intergenic 45.0%
CTATATGTGCATCTCCGGAT+TGG - chr2.3:7703616-7703635 MS.gene31311:CDS 45.0%
CTCTCAGAAGTGGACATATC+AGG - chr2.3:7706620-7706639 MS.gene31311:CDS 45.0%
CTCTTGATACAGGTGTTCCT+TGG - chr2.3:7704166-7704185 MS.gene31311:intron 45.0%
CTGATATGTCCACTTCTGAG+AGG + chr2.3:7706622-7706641 None:intergenic 45.0%
GAAGTACAGAATCATCGGTC+AGG + chr2.3:7705911-7705930 None:intergenic 45.0%
GAATTATTAGGCAGCCGAAG+TGG - chr2.3:7704993-7705012 MS.gene31311:intron 45.0%
GAGTTGGATAAACGAACCTG+TGG - chr2.3:7705758-7705777 MS.gene31311:intron 45.0%
GCAGAGAAGTGGAGAATTGT+AGG - chr2.3:7707906-7707925 MS.gene31311:intron 45.0%
GCTCAAAAACAGTACCATGG+AGG - chr2.3:7704762-7704781 MS.gene31311:intron 45.0%
GGAATGAAGTGAAGCCAAAG+AGG + chr2.3:7703754-7703773 None:intergenic 45.0%
GGACTGAAAATTGGAGTGCA+TGG - chr2.3:7704430-7704449 MS.gene31311:CDS 45.0%
GGGATGTCCACATTAAGCTT+AGG + chr2.3:7706336-7706355 None:intergenic 45.0%
GGTACATGGTATCTGTGAGA+TGG + chr2.3:7707242-7707261 None:intergenic 45.0%
GTTGCATGAGTCTGTGCAAT+CGG + chr2.3:7707076-7707095 None:intergenic 45.0%
GTTGCCACAACCTCTATTTG+GGG - chr2.3:7705250-7705269 MS.gene31311:CDS 45.0%
TCAGTTCGGAACTTAATCCC+TGG + chr2.3:7703775-7703794 None:intergenic 45.0%
TCATCCTTCGAAATACCCAC+AGG + chr2.3:7705777-7705796 None:intergenic 45.0%
TCTTTGGCACTCCTCTACAA+GGG + chr2.3:7708146-7708165 None:intergenic 45.0%
TGCAAGCTTGCAGTTTACGA+AGG + chr2.3:7706036-7706055 None:intergenic 45.0%
TGCTCCCACTGTGTCAAAAA+AGG + chr2.3:7706538-7706557 None:intergenic 45.0%
TTCGTAAACTGCAAGCTTGC+AGG - chr2.3:7706035-7706054 MS.gene31311:CDS 45.0%
TTCTCTTGGTCCAAACCTAG+AGG - chr2.3:7705090-7705109 MS.gene31311:intron 45.0%
TTGACAGTGGTTTCCCTCTT+TGG - chr2.3:7703737-7703756 MS.gene31311:CDS 45.0%
TTGATCTCTCCTCTCAGAAG+TGG - chr2.3:7706610-7706629 MS.gene31311:CDS 45.0%
! AAAACCTGTGGAGTACTACG+AGG + chr2.3:7702929-7702948 None:intergenic 45.0%
! AAACCTGTGGAGTACTACGA+GGG + chr2.3:7702928-7702947 None:intergenic 45.0%
! AGCATAAAGCACTAGGGTGA+AGG + chr2.3:7703822-7703841 None:intergenic 45.0%
! CAGTTGTGATTGACTTCACG+GGG - chr2.3:7706977-7706996 MS.gene31311:intron 45.0%
! CATTTGATATGATGGAGCGC+AGG + chr2.3:7707938-7707957 None:intergenic 45.0%
! CCAGTTGTGATTGACTTCAC+GGG - chr2.3:7706976-7706995 MS.gene31311:intron 45.0%
! CTTTGGCTTCACTTCATTCC+AGG - chr2.3:7703754-7703773 MS.gene31311:CDS 45.0%
! GCAGTTTACGAAGGCATGAA+GGG + chr2.3:7706027-7706046 None:intergenic 45.0%
! GGGCAAAAGCATAAAGCACT+AGG + chr2.3:7703829-7703848 None:intergenic 45.0%
! GGGGTGTTCATGTCTAATTG+AGG - chr2.3:7703703-7703722 MS.gene31311:CDS 45.0%
! GGTCATTGATGGCAAACGTA+GGG - chr2.3:7702877-7702896 MS.gene31311:CDS 45.0%
! TGCAGTTTACGAAGGCATGA+AGG + chr2.3:7706028-7706047 None:intergenic 45.0%
! TGGTCATTGATGGCAAACGT+AGG - chr2.3:7702876-7702895 MS.gene31311:CDS 45.0%
! TTTGGAGGGAGAGTTGATCA+TGG - chr2.3:7706189-7706208 MS.gene31311:intron 45.0%
! TTTTTGACACAGTGGGAGCA+GGG - chr2.3:7706538-7706557 MS.gene31311:intron 45.0%
!! AACTTTGACCGAAGTACTGG+CGG - chr2.3:7704789-7704808 MS.gene31311:intron 45.0%
!! CCAACCGTTGATTTGGTACA+AGG - chr2.3:7706804-7706823 MS.gene31311:intron 45.0%
!! CCATAGTTCTGGTGTGCAAA+TGG + chr2.3:7706513-7706532 None:intergenic 45.0%
!! GATGCACCGATTGATGAGTA+TGG - chr2.3:7704840-7704859 MS.gene31311:intron 45.0%
!!! CCATGGTACTGTTTTTGAGC+AGG + chr2.3:7704762-7704781 None:intergenic 45.0%
!!! GGAGCCTTTTTTGACACAGT+GGG - chr2.3:7706531-7706550 MS.gene31311:intron 45.0%
!!! TGGAGCCTTTTTTGACACAG+TGG - chr2.3:7706530-7706549 MS.gene31311:intron 45.0%
!!! TTTTTTGACACAGTGGGAGC+AGG - chr2.3:7706537-7706556 MS.gene31311:intron 45.0%
!!! ATAAAATAACATTTTTATTA+TGG - chr2.3:7705658-7705677 MS.gene31311:CDS 5.0%
AAGATGCTCACAGACCATGC+TGG + chr2.3:7705425-7705444 None:intergenic 50.0%
AAGTTTCCGCATGTCCCTAG+TGG + chr2.3:7707518-7707537 None:intergenic 50.0%
ACAACTGGATTACTGCCGGA+TGG + chr2.3:7706964-7706983 None:intergenic 50.0%
ACCGGTCCCGTGATATTGAA+AGG - chr2.3:7706564-7706583 MS.gene31311:intron 50.0%
AGATCTTCCACAGGTCTGTG+AGG + chr2.3:7704572-7704591 None:intergenic 50.0%
ATTTGTGAAGGCAGTGGCTG+AGG - chr2.3:7703588-7703607 MS.gene31311:CDS 50.0%
CAGGCGGCAGTTTATAAGAC+AGG - chr2.3:7705317-7705336 MS.gene31311:CDS 50.0%
CCCGTGAAGTCAATCACAAC+TGG + chr2.3:7706979-7706998 None:intergenic 50.0%
CGAACCTGTGGGTATTTCGA+AGG - chr2.3:7705770-7705789 MS.gene31311:intron 50.0%
CGGGACTATATGTGCATCTC+CGG - chr2.3:7703611-7703630 MS.gene31311:CDS 50.0%
CTCTTTGGCACTCCTCTACA+AGG + chr2.3:7708147-7708166 None:intergenic 50.0%
GATGCTCCTGATCCAATCGT+AGG - chr2.3:7704207-7704226 MS.gene31311:intron 50.0%
GATGGGAAAAGGTGAGGCTT+GGG - chr2.3:7706999-7707018 MS.gene31311:intron 50.0%
GCAAATGCGAGATCTTCCAC+AGG + chr2.3:7704581-7704600 None:intergenic 50.0%
GCAACATTGGACTCAGTGCA+GGG + chr2.3:7705235-7705254 None:intergenic 50.0%
GCAAGCTATGGAACACCACT+AGG - chr2.3:7707500-7707519 MS.gene31311:intron 50.0%
GCCAGTACTTCGGTCAAAGT+TGG + chr2.3:7704790-7704809 None:intergenic 50.0%
GGCCAAGCGATTCAATGTGA+AGG + chr2.3:7706001-7706020 None:intergenic 50.0%
GGGCAAATATCTTTCGGACG+TGG + chr2.3:7705890-7705909 None:intergenic 50.0%
GGTCTCTCTAGTGGAAGTTC+AGG - chr2.3:7706748-7706767 MS.gene31311:intron 50.0%
GTCTTATAAACTGCCGCCTG+CGG + chr2.3:7705317-7705336 None:intergenic 50.0%
TGAATGGTCCGCCAGTACTT+CGG + chr2.3:7704800-7704819 None:intergenic 50.0%
TGTGAGTAGGTTGCTTGAGC+TGG - chr2.3:7707680-7707699 MS.gene31311:intron 50.0%
! GACAGAACCTGGCCTTTAAC+AGG + chr2.3:7703124-7703143 None:intergenic 50.0%
! GATTCAGCCTATGGTTCTGC+TGG - chr2.3:7704105-7704124 MS.gene31311:intron 50.0%
! GGTCAAAGTTGGTTCCTCCA+TGG + chr2.3:7704779-7704798 None:intergenic 50.0%
! GTGATTGACTTCACGGGGAT+GGG - chr2.3:7706982-7707001 MS.gene31311:intron 50.0%
! TGTGATTGACTTCACGGGGA+TGG - chr2.3:7706981-7707000 MS.gene31311:intron 50.0%
! TTACGAAGGCATGAAGGGCA+TGG + chr2.3:7706022-7706041 None:intergenic 50.0%
!! GACAAAGCATTGGGCGATAC+TGG - chr2.3:7707028-7707047 MS.gene31311:intron 50.0%
!! GGAGACATCGATTCAGCCTA+TGG - chr2.3:7704096-7704115 MS.gene31311:intron 50.0%
AGAGTCCACGTTGGCGAGAA+AGG + chr2.3:7705357-7705376 None:intergenic 55.0%
CGGACGCTGCAGAAGCAATA+AGG - chr2.3:7707544-7707563 MS.gene31311:intron 55.0%
CTACCCTCGTAGTACTCCAC+AGG - chr2.3:7702922-7702941 MS.gene31311:CDS 55.0%
CTAGTGGAAGTTCAGGAGCG+TGG - chr2.3:7706755-7706774 MS.gene31311:intron 55.0%
GACTTCACGGGGATGGGAAA+AGG - chr2.3:7706988-7707007 MS.gene31311:intron 55.0%
GGAACACCACTAGGGACATG+CGG - chr2.3:7707509-7707528 MS.gene31311:intron 55.0%
GGACACTTGAGGAACAGTGC+AGG + chr2.3:7707446-7707465 None:intergenic 55.0%
GGATGGGAAAAGGTGAGGCT+TGG - chr2.3:7706998-7707017 MS.gene31311:intron 55.0%
GGCAACATTGGACTCAGTGC+AGG + chr2.3:7705236-7705255 None:intergenic 55.0%
TATTGCTTCTGCAGCGTCCG+TGG + chr2.3:7707544-7707563 None:intergenic 55.0%
TGGGTTTCCTCACAGACCTG+TGG - chr2.3:7704562-7704581 MS.gene31311:intron 55.0%
! GCTTGCTGACACATGACCCA+AGG + chr2.3:7704186-7704205 None:intergenic 55.0%
!!! GCACGCTTTTTCCAACGAGG+TGG - chr2.3:7704605-7704624 MS.gene31311:intron 55.0%
!!! GTCGCACGCTTTTTCCAACG+AGG - chr2.3:7704602-7704621 MS.gene31311:intron 55.0%
ACAGTGGGAGCAGGGATCAC+CGG - chr2.3:7706546-7706565 MS.gene31311:intron 60.0%
CACGGGGATGGGAAAAGGTG+AGG - chr2.3:7706993-7707012 MS.gene31311:intron 60.0%
TGCTGCCTTTCTCGCCAACG+TGG - chr2.3:7705349-7705368 MS.gene31311:intron 60.0%
TGTGAAGGCAGTGGCTGAGG+CGG - chr2.3:7703591-7703610 MS.gene31311:CDS 60.0%
GTGAAGGCAGTGGCTGAGGC+GGG - chr2.3:7703592-7703611 MS.gene31311:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 7702839 7708212 7702839 ID=MS.gene31311
chr2.3 mRNA 7702839 7708212 7702839 ID=MS.gene31311.t1;Parent=MS.gene31311
chr2.3 exon 7708108 7708212 7708108 ID=MS.gene31311.t1.exon1;Parent=MS.gene31311.t1
chr2.3 CDS 7708108 7708212 7708108 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7707916 7708011 7707916 ID=MS.gene31311.t1.exon2;Parent=MS.gene31311.t1
chr2.3 CDS 7707916 7708011 7707916 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7707383 7707495 7707383 ID=MS.gene31311.t1.exon3;Parent=MS.gene31311.t1
chr2.3 CDS 7707383 7707495 7707383 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7707241 7707307 7707241 ID=MS.gene31311.t1.exon4;Parent=MS.gene31311.t1
chr2.3 CDS 7707241 7707307 7707241 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7707073 7707165 7707073 ID=MS.gene31311.t1.exon5;Parent=MS.gene31311.t1
chr2.3 CDS 7707073 7707165 7707073 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7706827 7706970 7706827 ID=MS.gene31311.t1.exon6;Parent=MS.gene31311.t1
chr2.3 CDS 7706827 7706970 7706827 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7706600 7706688 7706600 ID=MS.gene31311.t1.exon7;Parent=MS.gene31311.t1
chr2.3 CDS 7706600 7706688 7706600 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7706402 7706507 7706402 ID=MS.gene31311.t1.exon8;Parent=MS.gene31311.t1
chr2.3 CDS 7706402 7706507 7706402 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7706190 7706277 7706190 ID=MS.gene31311.t1.exon9;Parent=MS.gene31311.t1
chr2.3 CDS 7706190 7706277 7706190 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7705940 7706058 7705940 ID=MS.gene31311.t1.exon10;Parent=MS.gene31311.t1
chr2.3 CDS 7705940 7706058 7705940 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7705570 7705731 7705570 ID=MS.gene31311.t1.exon11;Parent=MS.gene31311.t1
chr2.3 CDS 7705570 7705731 7705570 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7705177 7705367 7705177 ID=MS.gene31311.t1.exon12;Parent=MS.gene31311.t1
chr2.3 CDS 7705177 7705367 7705177 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7704995 7705089 7704995 ID=MS.gene31311.t1.exon13;Parent=MS.gene31311.t1
chr2.3 CDS 7704995 7705089 7704995 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7704635 7704744 7704635 ID=MS.gene31311.t1.exon14;Parent=MS.gene31311.t1
chr2.3 CDS 7704635 7704744 7704635 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7704410 7704526 7704410 ID=MS.gene31311.t1.exon15;Parent=MS.gene31311.t1
chr2.3 CDS 7704410 7704526 7704410 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7704226 7704327 7704226 ID=MS.gene31311.t1.exon16;Parent=MS.gene31311.t1
chr2.3 CDS 7704226 7704327 7704226 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7703894 7704105 7703894 ID=MS.gene31311.t1.exon17;Parent=MS.gene31311.t1
chr2.3 CDS 7703894 7704105 7703894 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7703465 7703801 7703465 ID=MS.gene31311.t1.exon18;Parent=MS.gene31311.t1
chr2.3 CDS 7703465 7703801 7703465 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
chr2.3 exon 7702839 7702964 7702839 ID=MS.gene31311.t1.exon19;Parent=MS.gene31311.t1
chr2.3 CDS 7702839 7702964 7702839 ID=cds.MS.gene31311.t1;Parent=MS.gene31311.t1
Gene Sequence

>MS.gene31311

ATGTTTTGCACCAATGTGGATTATGATCATAGAGCATTGGTCATTGATGGCAAACGTAGGGTCTTGATTTCTGGTTCCATTCACTACCCTCGTAGTACTCCACAGGTTTTATATATGTCTCTCTTTGATTCTGTTTGTGTGTGTTTTTGCATTGTATTTGATTTTAAACAGTGTTGAATTTGTTGTTGTCGTTGTTTATAGATGTGGCCAGACCTTATTCAGAAATCAAAAGATGGAGGACTTGATGTCATTGAAACCTATGTTTTCTGGAACTTACATGAACCTGTTAAAGGCCAGGTTCTGTCTGCTTAATTTATTCTCTCACATTCTTACCATTTTCTTTCAGCATTGCATTGAATTTGTTCATGTGTGAAGGAAAAGTTTGCATTGCTTGCAGGAAAAGAAAACAAGTGTCTATGTTAAGCTGAATTGCTAATTGTTGAAAGCATGACTAAACACATTTCTAGACCCGTTTGGATTGACTTATTTGACTTTTTCTACTGACATAATCCCTCCAAGATAGATAATAAAACATATTAATTATGTGAAAACAATATGCCTTTGTTTTATCTTTTGTAAATAGAAATATCTTATACATAAGCATTTAGCTTATATGCTATAAGCACTTAATAAAGTAGTTTATCCAAACATGGTCTTGATCTACTATAAGGTTAGAAAGACTATTATAATTCATTGAAATGAAATGGATTTTTGCAGTATGATTTTGATGGGAGGAAGGATTTAGTGAAATTTGTGAAGGCAGTGGCTGAGGCGGGACTATATGTGCATCTCCGGATTGGTCCATATGTTTGTGCTGAATGGAACTATGGGTAAAGTTTGGTAATTTATGTGTATTATATTTCGGGGGTGTTCATGTCTAATTGAGGACTTTAACTTCTTGACAGTGGTTTCCCTCTTTGGCTTCACTTCATTCCAGGGATTAAGTTCCGAACTGACAATGAACCATTTAAGGTAAGTTACCTTCACCCTAGTGCTTTATGCTTTTGCCCTTGAATCTAAGTTCACTTAACAGGAAACTGTCTTCAGGCCGAAATGAAGCGATTCACCGCTAAGATTGTCGATCTCATGAAGCAAGAGAAACTGTATGCATCACAAGGAGGACCTATAATTTTATCTCAGGTTTTTAATCTTAAATACAATTTTAGTTAATATATTTTTGAAGATATTAAGGTCAAAGTTTATATTTGTTAATGTGAGAGTGTTTGTGATTTCTAATGACAGATAGAAAATGAGTATGGAGACATCGATTCAGCCTATGGTTCTGCTGGTAAATCATACATCAATTGGGCAGCAAAAATGGCTACATCTCTTGATACAGGTGTTCCTTGGGTCATGTGTCAGCAAGCAGATGCTCCTGATCCAATCGTAGGTTTTATGTTTTGATATGTCTACGTTAATTTTTTTTGGTTTATGGTTTACTAGGTTGCCTGTCTTCCAGAAAAGAGCAATCTTAGTATGCTGTCTGCATTCATCTTACTTGATTTTTACTTGAACTGCATGAAGATTAATACCTGCAATGGATTTTACTGCGATCAATTCACACCAAACTCTAAAACAAAGCCAAAAATGTGGACTGAAAATTGGAGTGCATGGTTAGCAACTTTGCATTCTTTTTTATATAAATAATTTAATCGAATTGTTTTTGTTATTTTCCAAATCTTACTTGAATTCTTTGGAATGGCAGGTATCTTTTATTTGGTGGTGGGTTTCCTCACAGACCTGTGGAAGATCTCGCATTTGCTGTCGCACGCTTTTTCCAACGAGGTGGAACATTTCAAAATTACTATATGGTATTGCAACCTGAAATGTTGTTCACAAGTTCAATTTTATAGGATAGTAGTACTTCACGGAAAAATTGGCTCTAAGAGGAATTAGCTGATATTGTATAATTTTTTATTGCCTGCTCAAAAACAGTACCATGGAGGAACCAACTTTGACCGAAGTACTGGCGGACCATTCATTGCTACAAGTTATGATTTTGATGCACCGATTGATGAGTATGGTACGATTCCTTCAACCTTCATACTGAAATCTATTGTTCATGTTGTAGCCATCACAAATACAACACTGGTAATACATCGAAGAAGATAAATTGACAATTGGATTTTTTAATATCTTTGCTATATGCTGCAGGAATTATTAGGCAGCCGAAGTGGGGTCATCTTAAAGATTTGCACAAGTCCATAAAGCTCTGTGAAGAAGCATTAATAGCTACAGAACCCAAGATTACTTCTCTTGGTCCAAACCTAGAGGTTTATATTGAAATTTTTGTTCGTTAGAAACATCTTATTCCGCGTCTTAGGATATAATTTATTTTGTAACTAAAACTCATCTGGTTTGTCAATCTTTTAAGATTCTTTCTCTGGAAAATTCCCTGCACTGAGTCCAATGTTGCCACAACCTCTATTTGGGGAATTAACTAGATTAGGTCTTAACAGTCTTTTACTATTTGAACCGCAGGCGGCAGTTTATAAGACAGGATCTGTATGTGCTGCCTTTCTCGCCAACGTGGACTCTAAATCTGATAGGACTGTAAATTTCAGTGGCAATTCATATCACTTGCCAGCATGGTCTGTGAGCATCTTACCAGATTGCAAGAATGTAGTGCTTAATACTGCAAAGGTTAGTCATGCCCTCATTCGTGTTATGTTGCTTCAATAATGATGACTATCGCAGTCAAAATAGATAGTTTAATTGAATAGAATTGCTAAAAAAGTGTGATTAATATTCATTTTGTAATTAACCTATCTATAGCCAGGGTGTTTTATCTTATTGGTTACTAAAGTAAGTAGGATGTAATAAAATAACATTTTTATTATGGCAGATTAATTCTGTATCTGCAATTTCAAACTTCGTAACTGAAGATATCGGTTCTTTAGAAACTTCTAGTTCAAAATGGAGTTGGATAAACGAACCTGTGGGTATTTCGAAGGATGATATATTGTCTAAAACTGGATTACTTGAGCAAATAAATATCACAGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGGTACATGAGCCTCCACGTCCGAAAGATATTTGCCCTGACCGATGATTCTGTACTTCTTGATAACACTTCTATTGTATTCTTTTGAAGCGTTGATCTTATGGATGATCCTGGTTCTCATACTTTCCTTCACATTGAATCGCTTGGCCATGCCCTTCATGCCTTCGTAAACTGCAAGCTTGCAGGTAATTTATTCACTAGGATTTTATGATTTTTATATTCTGAAAGTTTTAAAGAGGCTGTATTACTGAAACTCAAATGAAGTCAAGGTTGATTTTAAAACAAGTTAAAAATATGAGTTGATCATGAATTTTTTTTTTGGAGGGAGAGTTGATCATGGATGTTCTGTCCAAAAATGTTGATAATTTATTGTTTCAATTAAGTTCTTGAATTATTAAATAATAACTTTCTATGATATTATTGATGAATTCTTAGGGAGTCAAACCGGGAACAAAGACAAACCTAAGCTTAATGTGGACATCCCAATCACAGTAATTTCTGGAAAGAACCAAATTGATCTGCTGAGTTTAACAGTTGGACTTCAGGTTCAGCTTTTCTTGTTTTTAGTTTCCAATTATGCATAGAATGGCTTGCTCCTCCAATGATTTCTCTCATTACTCTATCTAAGCTAACATGAACCATTTGCACACCAGAACTATGGAGCCTTTTTTGACACAGTGGGAGCAGGGATCACCGGTCCCGTGATATTGAAAGGTTTGAAGAATGGCAACAACACTCTTGATCTCTCCTCTCAGAAGTGGACATATCAGGTCGGTCTTCACTTTTGATTGAAGACTATTAATTAGTCTTAATGAAGATACATTGTTAATGGAGTTAATTCTTTTGATACAGGTTGGCCTAAAAGGTGAAGATTTAGGTCTCTCTAGTGGAAGTTCAGGAGCGTGGAATTCACAGTCTACTTTCCCTAAGAACCAACCGTTGATTTGGTACAAGGTAATTTTATTTTAAATTTATTGTTTCCCTTGATACAAGGTAGGGAATTTCAAATTAAGGGAATGCTACTGTATGAAAAATGTTTTTTGCTACTAACCGATGTGACACATGTTGCACTAGACAAACATTGATGCTCCATCCGGCAGTAATCCAGTTGTGATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAAAGCATTGGGCGATACTGGCCTACATATGTTGCTTCAAATGCCGATTGCACAGACTCATGCAACTACAGAGGACCTTTTACTCAAACCAAATGTCACATGAATTGTGGAAAACCATCACAGACATTGTAAGTGTTGCAAATTTTCAATGAAATAGAGCTTAAACATGAAAAAAAATCTTGATCTATGATGTGACAGAGACATTAATCCCATCTCACAGATACCATGTACCACGATCGTTTTTGAAACCAAACGGCAACACTCTTGTATTGTTTGAGGAAAGTGGTGGTGATCCAACGCAAATAGCTTTTGCTACAAAACAGCTAGAAAGTTTGTGTGCACATGTATCTGATTCACACCCACCTCAAATAGACTTGTGGAACCAAGATACAGAATCAGGGGAAAAAGTAGGGCCTGCACTGTTCCTCAAGTGTCCTAATCATAATCAGGTAATCTCTTCCATTAAATTTGCAAGCTATGGAACACCACTAGGGACATGCGGAAACTTCTACCACGGACGCTGCAGAAGCAATAAGGCGATGTCAATTGTAAAGAAGGTGTTTATCTGGATTCCTGTTCCCTTGCTAATTTGATATGTTTCACTTTGGTTTAGATCGACTATGTTGGGTATGGCTCATAGTTTACTGATATGTGAGTAGGTTGCTTGAGCTGGTGTGAATAATAGAAAATCAACTAATCAACTAATAGTATTTAAACACAAGCACTAATATGTAACCCTATGCTTGAACAATAGAAAACCACTACAACCATTGTGCATTTGTAGACGTAGACACAATTGGCCAAACTCTGTTATCAAATCTTAGTTTTTTCCGTTGGTTTTAAAGTGGTTAGCGGCGAAACTCATACACACTATGTGCAGAGAAGTGGAGAATTGTAGGTTCGAACCTGCGCTCCATCATATCAAATGTCCCTACAGTGTTTTACCGTCTAAGTTGTACTTACGGGACAATCTTTTGTGTTATTTGTTTGTGTTTTTCATATCTGATTTCTTTTGAACCAGAGTTGTTGTAACATACTAAAATTATCTTATTAACAGGCCTGCATTGGATCAAGAAGTTGTAGTGTTGGAGTATCAACTGATACATTTGGAGACCCTTGTAGAGGAGTGCCAAAGAGTTTAGCTGTTGAAGCTACTTGTGCTTATAGCCATACAAACATGTAA
Protein sequence

>MS.gene31311.t1

MFCTNVDYDHRALVIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNLHEPVKGQYDFDGRKDLVKFVKAVAEAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDLMKQEKLYASQGGPIILSQIENEYGDIDSAYGSAGKSYINWAAKMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSKTKPKMWTENWSAWYLLFGGGFPHRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRSTGGPFIATSYDFDAPIDEYGIIRQPKWGHLKDLHKSIKLCEEALIATEPKITSLGPNLEAAVYKTGSVCAAFLANVDSKSDRTVNFSGNSYHLPAWSVSILPDCKNVVLNTAKINSVSAISNFVTEDIGSLETSSSKWSWINEPVGISKDDILSKTGLLEQINITADRSDYLWYSLSVDLMDDPGSHTFLHIESLGHALHAFVNCKLAGSQTGNKDKPKLNVDIPITVISGKNQIDLLSLTVGLQNYGAFFDTVGAGITGPVILKGLKNGNNTLDLSSQKWTYQVGLKGEDLGLSSGSSGAWNSQSTFPKNQPLIWYKTNIDAPSGSNPVVIDFTGMGKGEAWVNGQSIGRYWPTYVASNADCTDSCNYRGPFTQTKCHMNCGKPSQTLYHVPRSFLKPNGNTLVLFEESGGDPTQIAFATKQLESLCAHVSDSHPPQIDLWNQDTESGEKVGPALFLKCPNHNQVISSIKFASYGTPLGTCGNFYHGRCRSNKAMSIVKKACIGSRSCSVGVSTDTFGDPCRGVPKSLAVEATCAYSHTNM