Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31365.t1 | XP_024631385.1 | 87.6 | 606 | 61 | 2 | 1 | 592 | 39 | 644 | 5.40E-159 | 571.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31365.t1 | Q67ZB3 | 28.1 | 153 | 110 | 0 | 435 | 587 | 300 | 452 | 8.6e-12 | 73.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31365.t1 | A0A072VCF9 | 85.1 | 623 | 62 | 2 | 1 | 592 | 39 | 661 | 2.2e-157 | 565.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052190 | MS.gene31365 | 0.812637 | 3.83E-51 | -1.69E-46 |
MS.gene053974 | MS.gene31365 | 0.817261 | 3.61E-52 | -1.69E-46 |
MS.gene05415 | MS.gene31365 | 0.812238 | 4.69E-51 | -1.69E-46 |
MS.gene056173 | MS.gene31365 | 0.807092 | 5.98E-50 | -1.69E-46 |
MS.gene056498 | MS.gene31365 | 0.804865 | 1.76E-49 | -1.69E-46 |
MS.gene060553 | MS.gene31365 | 0.805614 | 1.23E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31365.t1 | MTR_2g091245 | 82.456 | 627 | 71 | 4 | 1 | 592 | 39 | 661 | 0.0 | 946 |
MS.gene31365.t1 | MTR_6g045183 | 48.373 | 707 | 217 | 13 | 1 | 592 | 95 | 768 | 0.0 | 535 |
MS.gene31365.t1 | MTR_2g091105 | 51.484 | 674 | 202 | 12 | 4 | 591 | 53 | 687 | 0.0 | 529 |
MS.gene31365.t1 | MTR_2g091240 | 59.188 | 517 | 144 | 8 | 140 | 591 | 76 | 590 | 6.02e-173 | 503 |
MS.gene31365.t1 | MTR_2g091090 | 46.942 | 654 | 234 | 14 | 1 | 591 | 50 | 653 | 1.18e-152 | 454 |
MS.gene31365.t1 | MTR_5g078510 | 47.849 | 558 | 229 | 11 | 82 | 591 | 2 | 545 | 2.25e-140 | 419 |
MS.gene31365.t1 | MTR_2g091370 | 40.505 | 753 | 284 | 10 | 1 | 590 | 86 | 837 | 7.60e-139 | 424 |
MS.gene31365.t1 | MTR_2g091260 | 57.044 | 433 | 137 | 6 | 205 | 592 | 449 | 877 | 3.10e-133 | 410 |
MS.gene31365.t1 | MTR_2g091260 | 44.337 | 309 | 108 | 6 | 1 | 292 | 93 | 354 | 1.96e-53 | 196 |
MS.gene31365.t1 | MTR_2g104190 | 49.123 | 570 | 181 | 10 | 4 | 534 | 122 | 621 | 1.17e-129 | 394 |
MS.gene31365.t1 | MTR_2g091250 | 52.099 | 524 | 188 | 9 | 132 | 592 | 772 | 1295 | 1.37e-129 | 410 |
MS.gene31365.t1 | MTR_2g091250 | 38.642 | 383 | 127 | 11 | 1 | 332 | 63 | 388 | 6.58e-43 | 166 |
MS.gene31365.t1 | MTR_2g091250 | 34.199 | 231 | 117 | 5 | 112 | 325 | 631 | 843 | 3.91e-15 | 79.7 |
MS.gene31365.t1 | MTR_2g091250 | 40.523 | 153 | 67 | 3 | 197 | 325 | 509 | 661 | 5.16e-15 | 79.3 |
MS.gene31365.t1 | MTR_2g091250 | 32.028 | 281 | 142 | 7 | 64 | 325 | 537 | 787 | 2.77e-14 | 77.0 |
MS.gene31365.t1 | MTR_2g091250 | 35.341 | 249 | 115 | 6 | 105 | 325 | 333 | 563 | 3.21e-12 | 70.5 |
MS.gene31365.t1 | MTR_2g091285 | 51.240 | 484 | 187 | 7 | 39 | 489 | 122 | 589 | 3.39e-128 | 389 |
MS.gene31365.t1 | MTR_2g091030 | 51.429 | 525 | 195 | 8 | 1 | 489 | 88 | 588 | 2.11e-127 | 387 |
MS.gene31365.t1 | MTR_2g091335 | 49.455 | 550 | 203 | 12 | 1 | 489 | 69 | 604 | 3.36e-126 | 384 |
MS.gene31365.t1 | MTR_2g091290 | 37.649 | 757 | 289 | 12 | 2 | 576 | 66 | 821 | 3.61e-119 | 372 |
MS.gene31365.t1 | MTR_2g091110 | 46.780 | 590 | 229 | 11 | 68 | 591 | 731 | 1301 | 2.95e-118 | 380 |
MS.gene31365.t1 | MTR_2g091110 | 51.777 | 394 | 140 | 7 | 2 | 353 | 40 | 425 | 7.91e-93 | 311 |
MS.gene31365.t1 | MTR_2g091110 | 33.333 | 234 | 136 | 4 | 112 | 325 | 513 | 746 | 1.11e-17 | 87.8 |
MS.gene31365.t1 | MTR_2g091110 | 33.447 | 293 | 135 | 9 | 70 | 325 | 365 | 634 | 6.75e-17 | 85.5 |
MS.gene31365.t1 | MTR_2g091110 | 32.423 | 293 | 149 | 10 | 68 | 327 | 500 | 776 | 2.74e-13 | 73.6 |
MS.gene31365.t1 | MTR_2g091110 | 33.173 | 208 | 117 | 5 | 132 | 324 | 335 | 535 | 3.18e-11 | 67.0 |
MS.gene31365.t1 | MTR_5g038810 | 47.093 | 516 | 212 | 12 | 1 | 505 | 33 | 498 | 4.19e-118 | 365 |
MS.gene31365.t1 | MTR_2g010420 | 42.010 | 607 | 269 | 14 | 58 | 591 | 243 | 839 | 1.30e-113 | 358 |
MS.gene31365.t1 | MTR_2g010420 | 42.529 | 261 | 142 | 5 | 65 | 324 | 98 | 351 | 3.88e-38 | 150 |
MS.gene31365.t1 | MTR_2g091315 | 66.887 | 302 | 82 | 3 | 2 | 290 | 60 | 356 | 1.93e-111 | 345 |
MS.gene31365.t1 | MTR_2g091315 | 37.956 | 137 | 76 | 2 | 181 | 312 | 429 | 561 | 1.52e-12 | 70.9 |
MS.gene31365.t1 | MTR_2g091080 | 57.429 | 350 | 129 | 2 | 6 | 335 | 43 | 392 | 1.29e-106 | 338 |
MS.gene31365.t1 | MTR_2g091080 | 46.457 | 381 | 183 | 4 | 129 | 492 | 385 | 761 | 3.23e-70 | 241 |
MS.gene31365.t1 | MTR_2g091015 | 49.877 | 405 | 123 | 7 | 174 | 507 | 491 | 886 | 3.22e-97 | 317 |
MS.gene31365.t1 | MTR_2g091015 | 42.566 | 343 | 166 | 6 | 1 | 327 | 64 | 391 | 4.19e-52 | 192 |
MS.gene31365.t1 | MTR_2g091025 | 42.463 | 471 | 230 | 9 | 98 | 550 | 129 | 576 | 9.53e-95 | 301 |
MS.gene31365.t1 | MTR_3g110385 | 38.740 | 635 | 245 | 13 | 68 | 592 | 213 | 813 | 9.03e-93 | 303 |
MS.gene31365.t1 | MTR_3g110385 | 35.159 | 347 | 171 | 7 | 2 | 325 | 32 | 347 | 7.44e-33 | 134 |
MS.gene31365.t1 | MTR_2g093010 | 58.280 | 314 | 102 | 3 | 6 | 290 | 65 | 378 | 6.08e-92 | 301 |
MS.gene31365.t1 | MTR_2g093010 | 41.935 | 403 | 154 | 5 | 195 | 520 | 451 | 850 | 9.08e-74 | 253 |
MS.gene31365.t1 | MTR_2g093010 | 58.280 | 314 | 102 | 3 | 6 | 290 | 64 | 377 | 8.86e-92 | 301 |
MS.gene31365.t1 | MTR_2g093010 | 41.935 | 403 | 154 | 5 | 195 | 520 | 450 | 849 | 1.13e-73 | 252 |
MS.gene31365.t1 | MTR_2g010420 | 38.614 | 505 | 227 | 14 | 58 | 489 | 243 | 737 | 2.01e-71 | 244 |
MS.gene31365.t1 | MTR_2g010420 | 42.529 | 261 | 142 | 5 | 65 | 324 | 98 | 351 | 6.82e-38 | 149 |
MS.gene31365.t1 | MTR_2g091010 | 50.000 | 310 | 135 | 4 | 1 | 292 | 91 | 398 | 4.19e-71 | 243 |
MS.gene31365.t1 | MTR_2g091010 | 55.446 | 101 | 45 | 0 | 490 | 590 | 636 | 736 | 1.90e-24 | 108 |
MS.gene31365.t1 | MTR_2g091010 | 26.276 | 392 | 223 | 5 | 39 | 366 | 246 | 635 | 1.65e-13 | 73.9 |
MS.gene31365.t1 | MTR_2g091325 | 44.318 | 352 | 157 | 6 | 12 | 327 | 101 | 449 | 5.61e-65 | 223 |
MS.gene31365.t1 | MTR_2g091325 | 39.437 | 284 | 125 | 9 | 68 | 333 | 292 | 546 | 2.83e-30 | 125 |
MS.gene31365.t1 | MTR_2g090980 | 47.794 | 272 | 118 | 4 | 273 | 526 | 289 | 554 | 3.55e-62 | 215 |
MS.gene31365.t1 | MTR_2g091070 | 60.541 | 185 | 73 | 0 | 366 | 550 | 25 | 209 | 5.57e-62 | 204 |
MS.gene31365.t1 | MTR_7g056313 | 43.636 | 330 | 160 | 7 | 6 | 321 | 52 | 369 | 8.03e-59 | 201 |
MS.gene31365.t1 | MTR_2g103620 | 44.940 | 336 | 150 | 8 | 160 | 489 | 72 | 378 | 1.02e-57 | 198 |
MS.gene31365.t1 | MTR_2g103620 | 50.515 | 97 | 40 | 4 | 1 | 91 | 20 | 114 | 5.40e-13 | 71.2 |
MS.gene31365.t1 | MTR_2g091280 | 43.014 | 365 | 165 | 7 | 2 | 325 | 72 | 434 | 5.99e-57 | 204 |
MS.gene31365.t1 | MTR_2g091280 | 39.236 | 288 | 143 | 9 | 68 | 333 | 433 | 710 | 2.77e-26 | 114 |
MS.gene31365.t1 | MTR_2g091040 | 36.697 | 436 | 140 | 11 | 1 | 368 | 50 | 417 | 7.10e-56 | 197 |
MS.gene31365.t1 | MTR_2g091040 | 61.538 | 104 | 39 | 1 | 489 | 591 | 422 | 525 | 3.93e-30 | 124 |
MS.gene31365.t1 | MTR_2g091005 | 39.259 | 405 | 160 | 8 | 2 | 331 | 68 | 461 | 1.62e-54 | 195 |
MS.gene31365.t1 | MTR_2g091005 | 41.176 | 102 | 39 | 1 | 491 | 592 | 530 | 610 | 3.86e-11 | 66.2 |
MS.gene31365.t1 | MTR_2g103640 | 44.308 | 325 | 140 | 9 | 160 | 462 | 48 | 353 | 1.11e-48 | 173 |
MS.gene31365.t1 | MTR_2g103640 | 31.321 | 265 | 126 | 9 | 2 | 252 | 11 | 233 | 3.36e-12 | 68.6 |
MS.gene31365.t1 | MTR_8g467200 | 34.507 | 426 | 213 | 11 | 174 | 587 | 32 | 403 | 1.94e-46 | 171 |
MS.gene31365.t1 | MTR_5g078500 | 39.130 | 299 | 115 | 6 | 1 | 283 | 51 | 298 | 2.61e-43 | 157 |
MS.gene31365.t1 | MTR_4g046660 | 44.403 | 268 | 129 | 7 | 330 | 587 | 419 | 676 | 3.97e-39 | 153 |
MS.gene31365.t1 | MTR_2g091330 | 36.800 | 375 | 182 | 8 | 4 | 325 | 90 | 462 | 7.44e-36 | 142 |
MS.gene31365.t1 | MTR_2g091330 | 29.846 | 325 | 155 | 6 | 68 | 333 | 279 | 589 | 3.55e-14 | 75.9 |
MS.gene31365.t1 | MTR_8g107320 | 43.204 | 206 | 95 | 5 | 286 | 489 | 24 | 209 | 1.37e-32 | 125 |
MS.gene31365.t1 | MTR_8g106540 | 33.096 | 281 | 129 | 7 | 218 | 489 | 54 | 284 | 3.00e-27 | 112 |
MS.gene31365.t1 | MTR_7g056317 | 71.429 | 98 | 27 | 1 | 406 | 503 | 1 | 97 | 1.23e-26 | 104 |
MS.gene31365.t1 | MTR_4g084920 | 34.915 | 295 | 155 | 7 | 154 | 425 | 12 | 292 | 1.23e-23 | 102 |
MS.gene31365.t1 | MTR_4g084920 | 37.563 | 197 | 104 | 4 | 65 | 259 | 14 | 193 | 8.64e-19 | 88.2 |
MS.gene31365.t1 | MTR_4g084930 | 53.608 | 97 | 44 | 1 | 491 | 587 | 37 | 132 | 1.43e-23 | 97.4 |
MS.gene31365.t1 | MTR_4g095080 | 27.460 | 437 | 246 | 18 | 211 | 587 | 13 | 438 | 1.35e-17 | 86.7 |
MS.gene31365.t1 | MTR_2g090640 | 36.000 | 225 | 99 | 4 | 107 | 288 | 101 | 323 | 3.25e-17 | 85.5 |
MS.gene31365.t1 | MTR_2g091360 | 41.401 | 157 | 63 | 4 | 132 | 281 | 22 | 156 | 4.20e-17 | 83.2 |
MS.gene31365.t1 | MTR_2g091360 | 33.178 | 214 | 113 | 7 | 174 | 382 | 25 | 213 | 1.84e-11 | 66.2 |
MS.gene31365.t1 | MTR_2g064120 | 43.564 | 101 | 46 | 2 | 13 | 106 | 133 | 229 | 8.18e-12 | 66.2 |
MS.gene31365.t1 | MTR_3g056070 | 28.272 | 191 | 132 | 2 | 399 | 588 | 172 | 358 | 2.09e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31365.t1 | AT5G48385 | 28.025 | 157 | 113 | 0 | 435 | 591 | 300 | 456 | 9.40e-14 | 74.7 |
MS.gene31365.t1 | AT1G31814 | 25.926 | 189 | 133 | 4 | 391 | 575 | 153 | 338 | 7.61e-12 | 68.2 |
Find 93 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAAATCAGTTTGGCATTT+TGG | 0.038762 | 2.4:-9062025 | None:intergenic |
CTCTTCAGTATCTCTCTTTA+TGG | 0.145269 | 2.4:-9058934 | None:intergenic |
AACTGTTCAACAATGCATTT+TGG | 0.163705 | 2.4:+9062214 | MS.gene31365:CDS |
GAAGATTCTTTGGCGGTTAT+TGG | 0.178591 | 2.4:+9060812 | MS.gene31365:CDS |
CTTCTTACACAGTGGATTAA+TGG | 0.178750 | 2.4:-9060645 | None:intergenic |
TTTCGATGAAGATGAAATTT+TGG | 0.207548 | 2.4:+9060874 | MS.gene31365:CDS |
GATACAATGAACAAATTAAT+TGG | 0.217654 | 2.4:+9059266 | MS.gene31365:CDS |
TGATTCAAAGCTGAATAAAT+TGG | 0.240384 | 2.4:+9059655 | MS.gene31365:CDS |
AGATCAAGAAATTGCTAGTT+TGG | 0.267521 | 2.4:+9062190 | MS.gene31365:CDS |
AGAGAATAATGAAGATTCTT+TGG | 0.307674 | 2.4:+9060802 | MS.gene31365:CDS |
TTCTTACACAGTGGATTAAT+GGG | 0.334842 | 2.4:-9060644 | None:intergenic |
AATCCTTTATTCGTCCTTCC+AGG | 0.335813 | 2.4:-9059409 | None:intergenic |
TGTATCAAGCTCTATCTCTT+TGG | 0.338319 | 2.4:-9059249 | None:intergenic |
GTTCCTCTTCCTTCCTTTCA+CGG | 0.342021 | 2.4:-9059178 | None:intergenic |
GAACCTGGAAGGACGAATAA+AGG | 0.361370 | 2.4:+9059406 | MS.gene31365:CDS |
TTGAAAGATCATCTTCATCT+TGG | 0.365115 | 2.4:-9058794 | None:intergenic |
AATTTATTCAGCTTTGAATC+AGG | 0.368146 | 2.4:-9059653 | None:intergenic |
TGAATGTACTTTGGAACTTA+AGG | 0.374070 | 2.4:+9059226 | MS.gene31365:CDS |
AGAAACATGCAAGGAGGAAT+CGG | 0.392956 | 2.4:-9058733 | None:intergenic |
CTCACACAATCTTCAATCTT+CGG | 0.401450 | 2.4:-9060734 | None:intergenic |
GGAAGAGCAGCTCTATTTGA+TGG | 0.412227 | 2.4:+9059073 | MS.gene31365:CDS |
TATGGAGATGTTTCAGACTC+TGG | 0.412809 | 2.4:+9060931 | MS.gene31365:CDS |
TCTTGGGCATGATGATGATA+TGG | 0.414920 | 2.4:-9058777 | None:intergenic |
GAGGTTCTTACAAAGGAGAT+TGG | 0.415846 | 2.4:+9062254 | MS.gene31365:CDS |
TATTTGATGGAAAACATGAT+TGG | 0.423802 | 2.4:+9059086 | MS.gene31365:CDS |
CAGCTTTGAATCAGGATCCT+TGG | 0.431352 | 2.4:-9059645 | None:intergenic |
ACTAGCAATTTCTTGATCTC+TGG | 0.437247 | 2.4:-9062186 | None:intergenic |
GAAACATGCAAGGAGGAATC+GGG | 0.437891 | 2.4:-9058732 | None:intergenic |
AACCAACTCCGTTGAAATCA+AGG | 0.446102 | 2.4:+9062064 | MS.gene31365:CDS |
TGAAAGATCATCTTCATCTT+GGG | 0.448972 | 2.4:-9058793 | None:intergenic |
ACTGTTCACACAAATCAGTT+TGG | 0.453371 | 2.4:-9062033 | None:intergenic |
CTTGAGCTACAAGCACATAA+AGG | 0.454488 | 2.4:+9062287 | MS.gene31365:CDS |
AACCTTGATTTCAACGGAGT+TGG | 0.457408 | 2.4:-9062066 | None:intergenic |
GAAGGAGTTTCAATTAAAAG+AGG | 0.459023 | 2.4:+9059466 | MS.gene31365:CDS |
TATAGTTTACCTGTCAACTT+AGG | 0.471727 | 2.4:-9059695 | None:intergenic |
ATGGAGATGTTTCAGACTCT+GGG | 0.479493 | 2.4:+9060932 | MS.gene31365:CDS |
ATTCAGTTGTGCATATAACT+TGG | 0.485633 | 2.4:+9061962 | MS.gene31365:CDS |
AATTATTTGAGGAATGCAAA+TGG | 0.488538 | 2.4:+9058880 | MS.gene31365:CDS |
TCGTGCTGAAATGAAGGAAT+TGG | 0.489606 | 2.4:+9059328 | MS.gene31365:CDS |
TAAATTGGATGGACAAATGA+AGG | 0.494056 | 2.4:+9059670 | MS.gene31365:CDS |
CATTAATCCACTGTGTAAGA+AGG | 0.495309 | 2.4:+9060646 | MS.gene31365:CDS |
TTAAAAGAGGAGGAATTTGA+AGG | 0.496577 | 2.4:+9059479 | MS.gene31365:CDS |
TCAATGAAGAATCAACTTGA+GGG | 0.497417 | 2.4:+9059353 | MS.gene31365:CDS |
GCAATTCGAGGGACAAATGA+AGG | 0.498239 | 2.4:+9059448 | MS.gene31365:CDS |
AGTCATTGATAACATTGATA+AGG | 0.503822 | 2.4:+9059154 | MS.gene31365:CDS |
ATATGCAGTTGCATCTTACA+TGG | 0.508808 | 2.4:+9060487 | MS.gene31365:intron |
ATAATTCTTCTAACAGCGTA+AGG | 0.510690 | 2.4:-9058863 | None:intergenic |
TATCAAGGAGTTTGTAGTGA+AGG | 0.513397 | 2.4:+9059052 | MS.gene31365:CDS |
GGAATTTGAAGGCAGAGTGA+AGG | 0.514651 | 2.4:+9059490 | MS.gene31365:CDS |
TGAAGAACGTCCGAAAGAAA+AGG | 0.517838 | 2.4:+9059580 | MS.gene31365:CDS |
TGAGTCAGAGAAGAAGAACC+TGG | 0.519773 | 2.4:+9059391 | MS.gene31365:CDS |
TGGTGGAACAAGTTTGCAGT+TGG | 0.527919 | 2.4:+9060532 | MS.gene31365:CDS |
CAATTAAGTCATACCATTGG+TGG | 0.529146 | 2.4:+9060515 | MS.gene31365:CDS |
ATGAAGGAGCCTAAGTTGAC+AGG | 0.531788 | 2.4:+9059686 | MS.gene31365:CDS |
GGAGTTTCAATTAAAAGAGG+AGG | 0.531791 | 2.4:+9059469 | MS.gene31365:CDS |
GAATGGTCGTGCTGAAATGA+AGG | 0.534624 | 2.4:+9059322 | MS.gene31365:CDS |
GAATAATGAAGATTCTTTGG+CGG | 0.535139 | 2.4:+9060805 | MS.gene31365:CDS |
ATCAATGAAGAATCAACTTG+AGG | 0.537452 | 2.4:+9059352 | MS.gene31365:CDS |
TCAAAGCTGAATAAATTGGA+TGG | 0.541007 | 2.4:+9059659 | MS.gene31365:CDS |
GGAGCTCGAATCAAAGAAGA+AGG | 0.548520 | 2.4:+9059553 | MS.gene31365:CDS |
TTTGTTGAGAATCTTATCAA+GGG | 0.549666 | 2.4:+9061915 | MS.gene31365:CDS |
GCTGTTAGAAGAATTATTTG+AGG | 0.549884 | 2.4:+9058869 | MS.gene31365:CDS |
AAGAAAAGGTGAATGAGCTC+AGG | 0.552487 | 2.4:+9059594 | MS.gene31365:CDS |
TTAGAGTCTGAAAAGGAGAA+TGG | 0.552697 | 2.4:+9059305 | MS.gene31365:CDS |
GGAAATGAAATCAAAGGTGG+AGG | 0.559109 | 2.4:+9059511 | MS.gene31365:CDS |
TGCTCAGCACAAGATAGCTA+TGG | 0.565711 | 2.4:+9060913 | MS.gene31365:CDS |
CTGCAAACTTGTTCCACCAA+TGG | 0.566622 | 2.4:-9060528 | None:intergenic |
GGATTGCAAACTACAGTCTG+AGG | 0.567148 | 2.4:+9062235 | MS.gene31365:CDS |
GCTGTTTGAAAGACAAGCCA+AGG | 0.569057 | 2.4:+9059628 | MS.gene31365:CDS |
GGAACTCGAAGATCAAGTTA+AGG | 0.570629 | 2.4:+9059532 | MS.gene31365:CDS |
TGATAAGGACCGTGAAAGGA+AGG | 0.575886 | 2.4:+9059169 | MS.gene31365:CDS |
GAAGGAAATGAAATCAAAGG+TGG | 0.578454 | 2.4:+9059508 | MS.gene31365:CDS |
AGAGCGCAAGCTAGAGCTCA+AGG | 0.583452 | 2.4:+9059109 | MS.gene31365:CDS |
CAGAAGAACCTTGATTTCAA+CGG | 0.584171 | 2.4:-9062072 | None:intergenic |
ATCAAGAGAGAAGCAATTCG+AGG | 0.585327 | 2.4:+9059436 | MS.gene31365:CDS |
TGAAGTTTGTGACAAAGTGC+AGG | 0.585398 | 2.4:+9059013 | MS.gene31365:CDS |
GGACCGTGAAAGGAAGGAAG+AGG | 0.585661 | 2.4:+9059175 | MS.gene31365:CDS |
ATTAATCCACTGTGTAAGAA+GGG | 0.589689 | 2.4:+9060647 | MS.gene31365:CDS |
GATCAATTAAGTCATACCAT+TGG | 0.594274 | 2.4:+9060512 | MS.gene31365:CDS |
TTTCTTAACAGAAACATGCA+AGG | 0.602293 | 2.4:-9058742 | None:intergenic |
ACATTGATAAGGACCGTGAA+AGG | 0.607617 | 2.4:+9059165 | MS.gene31365:CDS |
TCAAGAGAGAAGCAATTCGA+GGG | 0.616023 | 2.4:+9059437 | MS.gene31365:CDS |
TTGTGTGAGAGAAGAAGCAT+TGG | 0.622866 | 2.4:+9060748 | MS.gene31365:CDS |
AGTGAAGGAAATGAAATCAA+AGG | 0.623538 | 2.4:+9059505 | MS.gene31365:CDS |
TCAGAGAAGAAGAACCTGGA+AGG | 0.625144 | 2.4:+9059395 | MS.gene31365:CDS |
TTGTTGAGAATCTTATCAAG+GGG | 0.647218 | 2.4:+9061916 | MS.gene31365:CDS |
TTGTCTCCCTTCTTACACAG+TGG | 0.649739 | 2.4:-9060653 | None:intergenic |
CGTAAGGTCTTTCTTCAGTG+AGG | 0.654872 | 2.4:-9058847 | None:intergenic |
ACAGTCTGAGGTTCTTACAA+AGG | 0.655255 | 2.4:+9062247 | MS.gene31365:CDS |
ACTGTTGCAGTTGAGTCACA+TGG | 0.677260 | 2.4:+9060569 | MS.gene31365:CDS |
GTTGTTCTAGCAGAAAGATG+CGG | 0.685845 | 2.4:-9060697 | None:intergenic |
CTTAACAGAAACATGCAAGG+AGG | 0.699023 | 2.4:-9058739 | None:intergenic |
AAACATGCAAGGAGGAATCG+GGG | 0.701101 | 2.4:-9058731 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGCTTAATTATAATATTA+TGG | + | chr2.4:9060071-9060090 | MS.gene31365:intron | 10.0% |
!! | ATTAAGAAAATATATTAACG+TGG | + | chr2.4:9059724-9059743 | MS.gene31365:intron | 15.0% |
!! | AAATTGAACTGATATCTAAT+TGG | + | chr2.4:9061651-9061670 | MS.gene31365:intron | 20.0% |
!! | AAGATTATGATATTAGTTGT+TGG | + | chr2.4:9061624-9061643 | MS.gene31365:intron | 20.0% |
!! | ATATGAATAAGAACATTTAC+CGG | - | chr2.4:9059759-9059778 | None:intergenic | 20.0% |
!! | ATCAAAGCATAAAAGATAAA+AGG | - | chr2.4:9061019-9061038 | None:intergenic | 20.0% |
!! | GATACAATGAACAAATTAAT+TGG | + | chr2.4:9059266-9059285 | MS.gene31365:CDS | 20.0% |
!!! | AGATTTTTGTTGTTGTTAAT+TGG | + | chr2.4:9061852-9061871 | MS.gene31365:intron | 20.0% |
!!! | AGTTATCCTATTTTCTTAAA+AGG | - | chr2.4:9061564-9061583 | None:intergenic | 20.0% |
!!! | ATGAATCCTTTTAAGAAAAT+AGG | + | chr2.4:9061555-9061574 | MS.gene31365:intron | 20.0% |
!!! | GATTTCATTGATTAATAAAC+AGG | - | chr2.4:9060226-9060245 | None:intergenic | 20.0% |
!!! | TATTTTTTTGAGAGAAACAT+GGG | - | chr2.4:9061311-9061330 | None:intergenic | 20.0% |
!!! | TGTCTCTTCTATTTTTTAAA+TGG | + | chr2.4:9061793-9061812 | MS.gene31365:intron | 20.0% |
!!! | TGTTTTGATATGAATAAATG+TGG | - | chr2.4:9061376-9061395 | None:intergenic | 20.0% |
!!! | TTATTTTTTTGAGAGAAACA+TGG | - | chr2.4:9061312-9061331 | None:intergenic | 20.0% |
!!! | TTTACCCATTTTATCATTTA+TGG | + | chr2.4:9061183-9061202 | MS.gene31365:intron | 20.0% |
!!! | TTTTTCAAGTATATTGCAAA+TGG | + | chr2.4:9060133-9060152 | MS.gene31365:intron | 20.0% |
! | AAAAACTGAAGAATGTATCA+AGG | + | chr2.4:9059037-9059056 | MS.gene31365:CDS | 25.0% |
! | AAAAATCGATGAATGTACTT+TGG | + | chr2.4:9059217-9059236 | MS.gene31365:CDS | 25.0% |
! | AATTATTTGAGGAATGCAAA+TGG | + | chr2.4:9058880-9058899 | MS.gene31365:CDS | 25.0% |
! | AGAAAAATTAGAGTCTGAAA+AGG | + | chr2.4:9059298-9059317 | MS.gene31365:CDS | 25.0% |
! | AGAGAATAATGAAGATTCTT+TGG | + | chr2.4:9060802-9060821 | MS.gene31365:CDS | 25.0% |
! | AGAGATTCATAAAATGTTCA+AGG | - | chr2.4:9060014-9060033 | None:intergenic | 25.0% |
! | ATCCACCATAAATGATAAAA+TGG | - | chr2.4:9061191-9061210 | None:intergenic | 25.0% |
! | ATCTCCTAGATTGAAATATA+TGG | - | chr2.4:9060357-9060376 | None:intergenic | 25.0% |
! | ATTACTATGTATTTGAACTC+AGG | + | chr2.4:9062157-9062176 | MS.gene31365:intron | 25.0% |
! | GAGATTCATAAAATGTTCAA+GGG | - | chr2.4:9060013-9060032 | None:intergenic | 25.0% |
! | TAAGAAAATAGGATAACTCT+TGG | + | chr2.4:9061566-9061585 | MS.gene31365:intron | 25.0% |
! | TATTTGATGGAAAACATGAT+TGG | + | chr2.4:9059086-9059105 | MS.gene31365:CDS | 25.0% |
! | TCCACCATAAATGATAAAAT+GGG | - | chr2.4:9061190-9061209 | None:intergenic | 25.0% |
! | TCTCCTAGATTGAAATATAT+GGG | - | chr2.4:9060356-9060375 | None:intergenic | 25.0% |
! | TGATTCAAAGCTGAATAAAT+TGG | + | chr2.4:9059655-9059674 | MS.gene31365:CDS | 25.0% |
! | TTTGTTGAGAATCTTATCAA+GGG | + | chr2.4:9061915-9061934 | MS.gene31365:CDS | 25.0% |
!! | AGTCATTGATAACATTGATA+AGG | + | chr2.4:9059154-9059173 | MS.gene31365:CDS | 25.0% |
!! | CAGTAAATGATAGTGAAAAT+AGG | - | chr2.4:9060424-9060443 | None:intergenic | 25.0% |
!! | CTATTTTCACTATCATTTAC+TGG | + | chr2.4:9060422-9060441 | MS.gene31365:intron | 25.0% |
!! | TTTCGATGAAGATGAAATTT+TGG | + | chr2.4:9060874-9060893 | MS.gene31365:CDS | 25.0% |
!! | TTTTGTTGAGAATCTTATCA+AGG | + | chr2.4:9061914-9061933 | MS.gene31365:CDS | 25.0% |
!!! | AAATGCCATTTTTCAATTTG+TGG | + | chr2.4:9061497-9061516 | MS.gene31365:intron | 25.0% |
!!! | AATTTATTCAGCTTTGAATC+AGG | - | chr2.4:9059656-9059675 | None:intergenic | 25.0% |
AAAAAAATCCACCCTATAGT+GGG | - | chr2.4:9061166-9061185 | None:intergenic | 30.0% | |
AAGCGATCTGTTAAAGAAAA+TGG | + | chr2.4:9061527-9061546 | MS.gene31365:intron | 30.0% | |
AAGTATATTGCAAATGGTGT+AGG | + | chr2.4:9060139-9060158 | MS.gene31365:intron | 30.0% | |
AGATCAAGAAATTGCTAGTT+TGG | + | chr2.4:9062190-9062209 | MS.gene31365:CDS | 30.0% | |
AGTGAAGGAAATGAAATCAA+AGG | + | chr2.4:9059505-9059524 | MS.gene31365:CDS | 30.0% | |
ATAATTCTTCTAACAGCGTA+AGG | - | chr2.4:9058866-9058885 | None:intergenic | 30.0% | |
ATCAATGAAGAATCAACTTG+AGG | + | chr2.4:9059352-9059371 | MS.gene31365:CDS | 30.0% | |
ATCCTAACTGTAGATAAGAA+TGG | - | chr2.4:9061100-9061119 | None:intergenic | 30.0% | |
ATGTATTTGAACTCAGGATA+AGG | + | chr2.4:9062163-9062182 | MS.gene31365:intron | 30.0% | |
ATGTTAATTCAGAACTGCTT+TGG | + | chr2.4:9060977-9060996 | MS.gene31365:intron | 30.0% | |
ATTAATCCACTGTGTAAGAA+GGG | + | chr2.4:9060647-9060666 | MS.gene31365:CDS | 30.0% | |
ATTCAGTTGTGCATATAACT+TGG | + | chr2.4:9061962-9061981 | MS.gene31365:CDS | 30.0% | |
ATTCATAACCAGTGTGAAAA+TGG | - | chr2.4:9062132-9062151 | None:intergenic | 30.0% | |
CAACAAAAATCTAAGCAGAT+TGG | - | chr2.4:9061844-9061863 | None:intergenic | 30.0% | |
GAAGGAGTTTCAATTAAAAG+AGG | + | chr2.4:9059466-9059485 | MS.gene31365:CDS | 30.0% | |
GAATAATGAAGATTCTTTGG+CGG | + | chr2.4:9060805-9060824 | MS.gene31365:CDS | 30.0% | |
GATCAATTAAGTCATACCAT+TGG | + | chr2.4:9060512-9060531 | MS.gene31365:CDS | 30.0% | |
GCTGTTAGAAGAATTATTTG+AGG | + | chr2.4:9058869-9058888 | MS.gene31365:CDS | 30.0% | |
TAAAAAAATCCACCCTATAG+TGG | - | chr2.4:9061167-9061186 | None:intergenic | 30.0% | |
TAAATTGGATGGACAAATGA+AGG | + | chr2.4:9059670-9059689 | MS.gene31365:CDS | 30.0% | |
TATAGTTTACCTGTCAACTT+AGG | - | chr2.4:9059698-9059717 | None:intergenic | 30.0% | |
TCAAAGCTGAATAAATTGGA+TGG | + | chr2.4:9059659-9059678 | MS.gene31365:CDS | 30.0% | |
TCAATGAAGAATCAACTTGA+GGG | + | chr2.4:9059353-9059372 | MS.gene31365:CDS | 30.0% | |
TCACCCATATATTTCAATCT+AGG | + | chr2.4:9060350-9060369 | MS.gene31365:intron | 30.0% | |
TGAAAGATCATCTTCATCTT+GGG | - | chr2.4:9058796-9058815 | None:intergenic | 30.0% | |
TGTCAATTCTCTCTAAACAA+AGG | - | chr2.4:9061705-9061724 | None:intergenic | 30.0% | |
TTAAAAGAGGAGGAATTTGA+AGG | + | chr2.4:9059479-9059498 | MS.gene31365:CDS | 30.0% | |
TTGAAAGATCATCTTCATCT+TGG | - | chr2.4:9058797-9058816 | None:intergenic | 30.0% | |
TTGCTCCACAAATTGAAAAA+TGG | - | chr2.4:9061505-9061524 | None:intergenic | 30.0% | |
TTGTTGAGAATCTTATCAAG+GGG | + | chr2.4:9061916-9061935 | MS.gene31365:CDS | 30.0% | |
TTTAGAGAGAATTGACATCT+TGG | + | chr2.4:9061708-9061727 | MS.gene31365:intron | 30.0% | |
TTTCTTAACAGAAACATGCA+AGG | - | chr2.4:9058745-9058764 | None:intergenic | 30.0% | |
! | AACTGTTCAACAATGCATTT+TGG | + | chr2.4:9062214-9062233 | MS.gene31365:CDS | 30.0% |
! | ACCCATTTTATCATTTATGG+TGG | + | chr2.4:9061186-9061205 | MS.gene31365:intron | 30.0% |
! | ACTGACATGTCTAGAATAAT+AGG | - | chr2.4:9061418-9061437 | None:intergenic | 30.0% |
! | GGTTTTGCAAATAAAGTTTC+TGG | + | chr2.4:9060953-9060972 | MS.gene31365:CDS | 30.0% |
! | GTCTAGAATAATAGGTGATT+TGG | - | chr2.4:9061410-9061429 | None:intergenic | 30.0% |
!! | GGTTCTTCTGTTTTTCTTAT+TGG | + | chr2.4:9062085-9062104 | MS.gene31365:intron | 30.0% |
!! | TGAATGTACTTTGGAACTTA+AGG | + | chr2.4:9059226-9059245 | MS.gene31365:CDS | 30.0% |
!! | TTCTTACACAGTGGATTAAT+GGG | - | chr2.4:9060647-9060666 | None:intergenic | 30.0% |
!! | TTTTGGCTATTCATGATCAA+AGG | + | chr2.4:9061127-9061146 | MS.gene31365:intron | 30.0% |
!!! | AATTTTGGAGCTTTTTGCAT+TGG | + | chr2.4:9060889-9060908 | MS.gene31365:CDS | 30.0% |
!!! | ACTCATGCGTTTTTTATTCA+TGG | + | chr2.4:9060046-9060065 | MS.gene31365:intron | 30.0% |
AAAAGCAGTGAAGGAAAACA+TGG | - | chr2.4:9061345-9061364 | None:intergenic | 35.0% | |
AAAGCAGTGAAGGAAAACAT+GGG | - | chr2.4:9061344-9061363 | None:intergenic | 35.0% | |
AACATCCTGACAAACATTGA+GGG | + | chr2.4:9060165-9060184 | MS.gene31365:intron | 35.0% | |
AACTGTAGATAAGAATGGCA+TGG | - | chr2.4:9061095-9061114 | None:intergenic | 35.0% | |
AATGGCATGGAAAGTAACAA+TGG | - | chr2.4:9061082-9061101 | None:intergenic | 35.0% | |
ACTAGCAATTTCTTGATCTC+TGG | - | chr2.4:9062189-9062208 | None:intergenic | 35.0% | |
ACTGTTCACACAAATCAGTT+TGG | - | chr2.4:9062036-9062055 | None:intergenic | 35.0% | |
ATATGCAGTTGCATCTTACA+TGG | + | chr2.4:9060487-9060506 | MS.gene31365:intron | 35.0% | |
ATGAAATCAAACACTGTCTC+TGG | + | chr2.4:9060238-9060257 | MS.gene31365:intron | 35.0% | |
CAATTAAGTCATACCATTGG+TGG | + | chr2.4:9060515-9060534 | MS.gene31365:CDS | 35.0% | |
CAGAAGAACCTTGATTTCAA+CGG | - | chr2.4:9062075-9062094 | None:intergenic | 35.0% | |
CATTAATCCACTGTGTAAGA+AGG | + | chr2.4:9060646-9060665 | MS.gene31365:CDS | 35.0% | |
CTAGAAACAGTTGCACTAAT+AGG | - | chr2.4:9060202-9060221 | None:intergenic | 35.0% | |
CTCACACAATCTTCAATCTT+CGG | - | chr2.4:9060737-9060756 | None:intergenic | 35.0% | |
CTCTTCAGTATCTCTCTTTA+TGG | - | chr2.4:9058937-9058956 | None:intergenic | 35.0% | |
CTGATTATTAGCCCACTATA+GGG | + | chr2.4:9061152-9061171 | MS.gene31365:intron | 35.0% | |
GAAGGAAATGAAATCAAAGG+TGG | + | chr2.4:9059508-9059527 | MS.gene31365:CDS | 35.0% | |
GATTCTCAACAAAATCTGCA+AGG | - | chr2.4:9061908-9061927 | None:intergenic | 35.0% | |
GGAGTTTCAATTAAAAGAGG+AGG | + | chr2.4:9059469-9059488 | MS.gene31365:CDS | 35.0% | |
TATCAAGGAGTTTGTAGTGA+AGG | + | chr2.4:9059052-9059071 | MS.gene31365:CDS | 35.0% | |
TATCTACAGTTAGGATGAGA+TGG | + | chr2.4:9061104-9061123 | MS.gene31365:intron | 35.0% | |
TGCCATTCTTATCTACAGTT+AGG | + | chr2.4:9061095-9061114 | MS.gene31365:intron | 35.0% | |
TGGCGCTTCTATAAATATGA+GGG | + | chr2.4:9060442-9060461 | MS.gene31365:intron | 35.0% | |
TGTATCAAGCTCTATCTCTT+TGG | - | chr2.4:9059252-9059271 | None:intergenic | 35.0% | |
TGTGCATGTGATATGAAAAC+TGG | - | chr2.4:9059920-9059939 | None:intergenic | 35.0% | |
TTAGAGTCTGAAAAGGAGAA+TGG | + | chr2.4:9059305-9059324 | MS.gene31365:CDS | 35.0% | |
! | AGCTCATTCACCTTTTCTTT+CGG | - | chr2.4:9059593-9059612 | None:intergenic | 35.0% |
! | CAAACATTCCATTTTCACAC+TGG | + | chr2.4:9062121-9062140 | MS.gene31365:intron | 35.0% |
! | CACAAATCAGTTTGGCATTT+TGG | - | chr2.4:9062028-9062047 | None:intergenic | 35.0% |
! | TACATATTTTCTGCCTGTTC+TGG | + | chr2.4:9061875-9061894 | MS.gene31365:intron | 35.0% |
!! | CTTCTTACACAGTGGATTAA+TGG | - | chr2.4:9060648-9060667 | None:intergenic | 35.0% |
!! | GTTTTCCTTCACTGCTTTTA+TGG | + | chr2.4:9061346-9061365 | MS.gene31365:intron | 35.0% |
!! | TGACATCTTGGTGTTAATCT+TGG | + | chr2.4:9061720-9061739 | MS.gene31365:intron | 35.0% |
!! | TTATGGTGGATGTAGTCTTT+AGG | + | chr2.4:9061200-9061219 | MS.gene31365:intron | 35.0% |
AACCAACTCCGTTGAAATCA+AGG | + | chr2.4:9062064-9062083 | MS.gene31365:CDS | 40.0% | |
AACCTTGATTTCAACGGAGT+TGG | - | chr2.4:9062069-9062088 | None:intergenic | 40.0% | |
AAGAAAAGGTGAATGAGCTC+AGG | + | chr2.4:9059594-9059613 | MS.gene31365:CDS | 40.0% | |
AATCCTTTATTCGTCCTTCC+AGG | - | chr2.4:9059412-9059431 | None:intergenic | 40.0% | |
AATGCCAACTGACATTCTCT+TGG | - | chr2.4:9061456-9061475 | None:intergenic | 40.0% | |
ACAACCAAGAGAATGTCAGT+TGG | + | chr2.4:9061449-9061468 | MS.gene31365:intron | 40.0% | |
ACATCCTGACAAACATTGAG+GGG | + | chr2.4:9060166-9060185 | MS.gene31365:intron | 40.0% | |
ACATTGATAAGGACCGTGAA+AGG | + | chr2.4:9059165-9059184 | MS.gene31365:CDS | 40.0% | |
AGAAACATGCAAGGAGGAAT+CGG | - | chr2.4:9058736-9058755 | None:intergenic | 40.0% | |
ATCAAGAGAGAAGCAATTCG+AGG | + | chr2.4:9059436-9059455 | MS.gene31365:CDS | 40.0% | |
ATGGAGATGTTTCAGACTCT+GGG | + | chr2.4:9060932-9060951 | MS.gene31365:CDS | 40.0% | |
ATTAACGTGGAGCAAGAATC+CGG | + | chr2.4:9059737-9059756 | MS.gene31365:intron | 40.0% | |
ATTATTAGCCCACTATAGGG+TGG | + | chr2.4:9061155-9061174 | MS.gene31365:intron | 40.0% | |
CAACATCCTGACAAACATTG+AGG | + | chr2.4:9060164-9060183 | MS.gene31365:intron | 40.0% | |
CTGGCGCTTCTATAAATATG+AGG | + | chr2.4:9060441-9060460 | MS.gene31365:intron | 40.0% | |
CTTAACAGAAACATGCAAGG+AGG | - | chr2.4:9058742-9058761 | None:intergenic | 40.0% | |
CTTGAGCTACAAGCACATAA+AGG | + | chr2.4:9062287-9062306 | MS.gene31365:CDS | 40.0% | |
GAAGATTCTTTGGCGGTTAT+TGG | + | chr2.4:9060812-9060831 | MS.gene31365:CDS | 40.0% | |
GAGGTTCTTACAAAGGAGAT+TGG | + | chr2.4:9062254-9062273 | MS.gene31365:CDS | 40.0% | |
GCTGATTATTAGCCCACTAT+AGG | + | chr2.4:9061151-9061170 | MS.gene31365:intron | 40.0% | |
GGAAATGAAATCAAAGGTGG+AGG | + | chr2.4:9059511-9059530 | MS.gene31365:CDS | 40.0% | |
GGAACTCGAAGATCAAGTTA+AGG | + | chr2.4:9059532-9059551 | MS.gene31365:CDS | 40.0% | |
GTGATCCATAAAAGCAGTGA+AGG | - | chr2.4:9061354-9061373 | None:intergenic | 40.0% | |
GTTGTTCTAGCAGAAAGATG+CGG | - | chr2.4:9060700-9060719 | None:intergenic | 40.0% | |
TAAACAAAGGCGAGAACTGT+GGG | - | chr2.4:9061692-9061711 | None:intergenic | 40.0% | |
TATGGAGATGTTTCAGACTC+TGG | + | chr2.4:9060931-9060950 | MS.gene31365:CDS | 40.0% | |
TCAAGAGAGAAGCAATTCGA+GGG | + | chr2.4:9059437-9059456 | MS.gene31365:CDS | 40.0% | |
TCGTGCTGAAATGAAGGAAT+TGG | + | chr2.4:9059328-9059347 | MS.gene31365:CDS | 40.0% | |
TGAAGAACGTCCGAAAGAAA+AGG | + | chr2.4:9059580-9059599 | MS.gene31365:CDS | 40.0% | |
TGAAGTTTGTGACAAAGTGC+AGG | + | chr2.4:9059013-9059032 | MS.gene31365:CDS | 40.0% | |
TGTCTCTGGTGATTCAGTTA+AGG | + | chr2.4:9060252-9060271 | MS.gene31365:intron | 40.0% | |
! | ACAGTCTGAGGTTCTTACAA+AGG | + | chr2.4:9062247-9062266 | MS.gene31365:CDS | 40.0% |
! | CAGTTAGGATGAGATGGTTT+TGG | + | chr2.4:9061110-9061129 | MS.gene31365:intron | 40.0% |
! | TCTTGGGCATGATGATGATA+TGG | - | chr2.4:9058780-9058799 | None:intergenic | 40.0% |
! | TTGTGTGAGAGAAGAAGCAT+TGG | + | chr2.4:9060748-9060767 | MS.gene31365:CDS | 40.0% |
AAACATGCAAGGAGGAATCG+GGG | - | chr2.4:9058734-9058753 | None:intergenic | 45.0% | |
AATGCCCCTCAATGTTTGTC+AGG | - | chr2.4:9060173-9060192 | None:intergenic | 45.0% | |
ACTGTTGCAGTTGAGTCACA+TGG | + | chr2.4:9060569-9060588 | MS.gene31365:CDS | 45.0% | |
CGTAAGGTCTTTCTTCAGTG+AGG | - | chr2.4:9058850-9058869 | None:intergenic | 45.0% | |
CTAAACAAAGGCGAGAACTG+TGG | - | chr2.4:9061693-9061712 | None:intergenic | 45.0% | |
GAAACATGCAAGGAGGAATC+GGG | - | chr2.4:9058735-9058754 | None:intergenic | 45.0% | |
GAACCTGGAAGGACGAATAA+AGG | + | chr2.4:9059406-9059425 | MS.gene31365:CDS | 45.0% | |
GAATGGTCGTGCTGAAATGA+AGG | + | chr2.4:9059322-9059341 | MS.gene31365:CDS | 45.0% | |
GCAATTCGAGGGACAAATGA+AGG | + | chr2.4:9059448-9059467 | MS.gene31365:CDS | 45.0% | |
GCTGTTTGAAAGACAAGCCA+AGG | + | chr2.4:9059628-9059647 | MS.gene31365:CDS | 45.0% | |
GGAAGAGCAGCTCTATTTGA+TGG | + | chr2.4:9059073-9059092 | MS.gene31365:CDS | 45.0% | |
GGAATTTGAAGGCAGAGTGA+AGG | + | chr2.4:9059490-9059509 | MS.gene31365:CDS | 45.0% | |
GGAGCTCGAATCAAAGAAGA+AGG | + | chr2.4:9059553-9059572 | MS.gene31365:CDS | 45.0% | |
GGATTGCAAACTACAGTCTG+AGG | + | chr2.4:9062235-9062254 | MS.gene31365:CDS | 45.0% | |
GTTCCTCTTCCTTCCTTTCA+CGG | - | chr2.4:9059181-9059200 | None:intergenic | 45.0% | |
TCAGAGAAGAAGAACCTGGA+AGG | + | chr2.4:9059395-9059414 | MS.gene31365:CDS | 45.0% | |
TGAGTCAGAGAAGAAGAACC+TGG | + | chr2.4:9059391-9059410 | MS.gene31365:CDS | 45.0% | |
TGATAAGGACCGTGAAAGGA+AGG | + | chr2.4:9059169-9059188 | MS.gene31365:CDS | 45.0% | |
TGCTCAGCACAAGATAGCTA+TGG | + | chr2.4:9060913-9060932 | MS.gene31365:CDS | 45.0% | |
TGGTGGAACAAGTTTGCAGT+TGG | + | chr2.4:9060532-9060551 | MS.gene31365:CDS | 45.0% | |
TTGTCTCCCTTCTTACACAG+TGG | - | chr2.4:9060656-9060675 | None:intergenic | 45.0% | |
! | ATGAAGGAGCCTAAGTTGAC+AGG | + | chr2.4:9059686-9059705 | MS.gene31365:CDS | 45.0% |
! | CTGCAAACTTGTTCCACCAA+TGG | - | chr2.4:9060531-9060550 | None:intergenic | 45.0% |
!! | CAGCTTTGAATCAGGATCCT+TGG | - | chr2.4:9059648-9059667 | None:intergenic | 45.0% |
AGAGCGCAAGCTAGAGCTCA+AGG | + | chr2.4:9059109-9059128 | MS.gene31365:CDS | 55.0% | |
GCAAGGTGCAAGACCAGAAC+AGG | - | chr2.4:9061891-9061910 | None:intergenic | 55.0% | |
GGACCGTGAAAGGAAGGAAG+AGG | + | chr2.4:9059175-9059194 | MS.gene31365:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 9058720 | 9062316 | 9058720 | ID=MS.gene31365 |
chr2.4 | mRNA | 9058720 | 9062316 | 9058720 | ID=MS.gene31365.t1;Parent=MS.gene31365 |
chr2.4 | exon | 9058720 | 9059707 | 9058720 | ID=MS.gene31365.t1.exon1;Parent=MS.gene31365.t1 |
chr2.4 | CDS | 9058720 | 9059707 | 9058720 | ID=cds.MS.gene31365.t1;Parent=MS.gene31365.t1 |
chr2.4 | exon | 9060495 | 9060974 | 9060495 | ID=MS.gene31365.t1.exon2;Parent=MS.gene31365.t1 |
chr2.4 | CDS | 9060495 | 9060974 | 9060495 | ID=cds.MS.gene31365.t1;Parent=MS.gene31365.t1 |
chr2.4 | exon | 9061913 | 9062085 | 9061913 | ID=MS.gene31365.t1.exon3;Parent=MS.gene31365.t1 |
chr2.4 | CDS | 9061913 | 9062085 | 9061913 | ID=cds.MS.gene31365.t1;Parent=MS.gene31365.t1 |
chr2.4 | exon | 9062179 | 9062316 | 9062179 | ID=MS.gene31365.t1.exon4;Parent=MS.gene31365.t1 |
chr2.4 | CDS | 9062179 | 9062316 | 9062179 | ID=cds.MS.gene31365.t1;Parent=MS.gene31365.t1 |
Gene Sequence |
Protein sequence |