Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31590.t1 | XP_003588595.1 | 96.8 | 339 | 9 | 2 | 1 | 338 | 1 | 338 | 8.40E-173 | 616.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31590.t1 | Q9FUD3 | 50.6 | 235 | 88 | 6 | 112 | 338 | 62 | 276 | 4.6e-42 | 173.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31590.t1 | G7I545 | 96.8 | 339 | 9 | 2 | 1 | 338 | 1 | 338 | 6.1e-173 | 616.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene31590.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059104 | MS.gene31590 | 0.891753 | 2.98E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31590.t1 | MTR_1g008990 | 96.755 | 339 | 9 | 2 | 1 | 338 | 1 | 338 | 0.0 | 666 |
| MS.gene31590.t1 | MTR_1g008990 | 95.122 | 246 | 10 | 2 | 1 | 245 | 1 | 245 | 3.97e-158 | 443 |
| MS.gene31590.t1 | MTR_3g109310 | 62.816 | 277 | 77 | 12 | 71 | 338 | 35 | 294 | 9.83e-98 | 291 |
| MS.gene31590.t1 | MTR_3g110010 | 66.929 | 127 | 38 | 4 | 175 | 298 | 633 | 758 | 1.63e-38 | 145 |
| MS.gene31590.t1 | MTR_3g109982 | 66.142 | 127 | 39 | 4 | 175 | 298 | 649 | 774 | 3.95e-38 | 144 |
| MS.gene31590.t1 | MTR_1g080920 | 52.857 | 140 | 62 | 2 | 124 | 259 | 161 | 300 | 4.14e-27 | 110 |
| MS.gene31590.t1 | MTR_7g115120 | 52.027 | 148 | 54 | 4 | 117 | 259 | 150 | 285 | 1.55e-25 | 105 |
| MS.gene31590.t1 | MTR_7g115140 | 43.810 | 105 | 58 | 1 | 139 | 243 | 103 | 206 | 7.24e-19 | 84.0 |
| MS.gene31590.t1 | MTR_1g022495 | 29.747 | 158 | 96 | 2 | 143 | 300 | 3 | 145 | 1.08e-11 | 62.8 |
| MS.gene31590.t1 | MTR_3g117120 | 41.558 | 77 | 45 | 0 | 168 | 244 | 27 | 103 | 1.21e-11 | 62.4 |
| MS.gene31590.t1 | MTR_8g086020 | 35.294 | 85 | 55 | 0 | 166 | 250 | 30 | 114 | 4.27e-11 | 61.2 |
| MS.gene31590.t1 | MTR_7g029400 | 39.474 | 114 | 62 | 2 | 130 | 243 | 50 | 156 | 5.70e-11 | 61.6 |
| MS.gene31590.t1 | MTR_8g015250 | 43.478 | 92 | 47 | 1 | 152 | 243 | 60 | 146 | 6.59e-11 | 60.8 |
| MS.gene31590.t1 | MTR_6g016375 | 40.385 | 104 | 56 | 3 | 156 | 258 | 77 | 175 | 7.40e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31590.t1 | AT5G24800 | 50.638 | 235 | 88 | 6 | 112 | 338 | 62 | 276 | 4.80e-61 | 197 |
| MS.gene31590.t1 | AT5G28770 | 58.333 | 108 | 43 | 1 | 155 | 260 | 130 | 237 | 1.99e-24 | 101 |
| MS.gene31590.t1 | AT5G28770 | 58.333 | 108 | 43 | 1 | 155 | 260 | 137 | 244 | 2.55e-24 | 101 |
| MS.gene31590.t1 | AT5G28770 | 61.111 | 90 | 35 | 0 | 155 | 244 | 137 | 226 | 1.96e-20 | 89.4 |
| MS.gene31590.t1 | AT4G02640 | 46.970 | 132 | 68 | 1 | 125 | 254 | 175 | 306 | 1.21e-15 | 77.8 |
| MS.gene31590.t1 | AT4G02640 | 46.970 | 132 | 68 | 1 | 125 | 254 | 169 | 300 | 1.21e-15 | 77.8 |
| MS.gene31590.t1 | AT4G02640 | 46.970 | 132 | 68 | 1 | 125 | 254 | 175 | 306 | 1.25e-15 | 77.8 |
| MS.gene31590.t1 | AT4G02640 | 42.500 | 160 | 87 | 2 | 100 | 254 | 141 | 300 | 1.43e-15 | 77.4 |
| MS.gene31590.t1 | AT3G54620 | 51.136 | 88 | 43 | 0 | 167 | 254 | 227 | 314 | 4.15e-13 | 70.1 |
| MS.gene31590.t1 | AT1G75390 | 39.759 | 83 | 50 | 0 | 168 | 250 | 38 | 120 | 7.73e-12 | 63.5 |
| MS.gene31590.t1 | AT2G18160 | 36.190 | 105 | 57 | 1 | 146 | 250 | 16 | 110 | 1.59e-11 | 62.8 |
| MS.gene31590.t1 | AT3G30530 | 39.773 | 88 | 53 | 0 | 156 | 243 | 66 | 153 | 6.73e-11 | 60.8 |
Find 75 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCTTGGGAGTGAGGTTT+TGG | 0.180329 | 1.1:-10653578 | None:intergenic |
| TGTTCAATTGACTCTGATTT+TGG | 0.206784 | 1.1:-10656025 | None:intergenic |
| GGCAGAATGGTGCTCCATTT+TGG | 0.285783 | 1.1:-10650806 | None:intergenic |
| GTCATCGAAGCTGGAGAATA+TGG | 0.297219 | 1.1:-10650837 | None:intergenic |
| CATCTGTAAGCTGCTTAAAT+AGG | 0.310185 | 1.1:-10655549 | None:intergenic |
| TTTGGCAGACCTTGAGGTTC+AGG | 0.310946 | 1.1:+10655368 | MS.gene31590:CDS |
| CCTGCGAAATGGAACCAAAA+TGG | 0.330729 | 1.1:+10650792 | None:intergenic |
| CTAAGACGCTTCATATCAAC+AGG | 0.337570 | 1.1:-10654588 | None:intergenic |
| TGCAGTGATGGTGGAGTTCT+TGG | 0.341951 | 1.1:-10653592 | None:intergenic |
| ATTGCTGTTTCGACGGTAAC+AGG | 0.344873 | 1.1:-10650908 | None:intergenic |
| TGAGCTCTTTGACTAGCTTA+TGG | 0.345147 | 1.1:+10656228 | MS.gene31590:CDS |
| AAGAAGAAAACAAGCACATT+TGG | 0.358483 | 1.1:+10655350 | MS.gene31590:CDS |
| TGTTGTTGTAGTCACTCCTT+TGG | 0.367802 | 1.1:-10654499 | None:intergenic |
| GGTGAAGTTAGCAGAGGATA+TGG | 0.388906 | 1.1:+10655962 | MS.gene31590:intron |
| AGTATTACCGGTGGCAGAAA+TGG | 0.392731 | 1.1:-10653634 | None:intergenic |
| CAGAATTCAGCTATTGGACT+TGG | 0.407633 | 1.1:+10656149 | MS.gene31590:CDS |
| AGTGGACAGAATTCAGCTAT+TGG | 0.421178 | 1.1:+10656143 | MS.gene31590:CDS |
| CCAGCTTCGATGACCTCAAA+TGG | 0.421645 | 1.1:+10650846 | MS.gene31590:CDS |
| CTGGAGAATATGGAGGTTGC+TGG | 0.422279 | 1.1:-10650827 | None:intergenic |
| TTTCCATGGACGGTGATTGT+AGG | 0.427364 | 1.1:-10656101 | None:intergenic |
| CATGGAAACGACGCTTCATA+TGG | 0.432634 | 1.1:+10656116 | MS.gene31590:CDS |
| CAAACAAGAGTATTATTTGT+TGG | 0.433570 | 1.1:-10653552 | None:intergenic |
| CACTAGTAATCTCCGTTGTA+TGG | 0.434010 | 1.1:+10656067 | MS.gene31590:CDS |
| TGTTAGCATCGCGAAATTGT+TGG | 0.440152 | 1.1:-10655576 | None:intergenic |
| TTGATATGAAGCGTCTTAGA+AGG | 0.440492 | 1.1:+10654592 | MS.gene31590:CDS |
| CCATTTGAGGTCATCGAAGC+TGG | 0.443299 | 1.1:-10650846 | None:intergenic |
| TTAGGTTGAACAGCTGAGGC+TGG | 0.444559 | 1.1:+10655516 | MS.gene31590:intron |
| CATATGAAGCGTCGTTTCCA+TGG | 0.454343 | 1.1:-10656115 | None:intergenic |
| GACGCTTCATATGGTGTTAG+TGG | 0.460901 | 1.1:+10656125 | MS.gene31590:CDS |
| ACATCGCCGACACCGATGAA+TGG | 0.462932 | 1.1:-10650965 | None:intergenic |
| ATTCTGCTGTGATCCATTTG+AGG | 0.470171 | 1.1:-10650859 | None:intergenic |
| AGCAGAGGATATGGTCTCTA+GGG | 0.483549 | 1.1:+10655971 | MS.gene31590:CDS |
| GCAGTGATGGTGGAGTTCTT+GGG | 0.488823 | 1.1:-10653591 | None:intergenic |
| TGGTGGAGTTCTTGGGAGTG+AGG | 0.489497 | 1.1:-10653584 | None:intergenic |
| AGATTACTAGTGTTGATTTG+TGG | 0.491316 | 1.1:-10656056 | None:intergenic |
| ACTGACCAGATTATGAAAAT+CGG | 0.504341 | 1.1:-10651014 | None:intergenic |
| TAGCAGAGGATATGGTCTCT+AGG | 0.512033 | 1.1:+10655970 | MS.gene31590:CDS |
| CGATGTAAAACCGTGTAAGA+TGG | 0.513999 | 1.1:+10650940 | MS.gene31590:CDS |
| AGAAGCTGGTTGTTAAAAGT+AGG | 0.514450 | 1.1:-10656002 | None:intergenic |
| TGCAGTCATGATTTCAACAA+TGG | 0.523773 | 1.1:+10656188 | MS.gene31590:CDS |
| ATTATGAAAATCGGCGGTGT+CGG | 0.528802 | 1.1:-10651005 | None:intergenic |
| TGTTGAAGCTTTAAGAGCTA+AGG | 0.529338 | 1.1:+10655624 | MS.gene31590:CDS |
| AGCTCTTAAAGCTTCAACAT+CGG | 0.530694 | 1.1:-10655620 | None:intergenic |
| GCTTCATCATCTTCATCAGA+TGG | 0.530813 | 1.1:-10654540 | None:intergenic |
| CTCAATAGTTGCAGTGATGG+TGG | 0.531409 | 1.1:-10653601 | None:intergenic |
| ACATGTTGAAAATGAAGTTA+CGG | 0.531605 | 1.1:-10653523 | None:intergenic |
| TTTCTTAGGTTGAACAGCTG+AGG | 0.532387 | 1.1:+10655512 | MS.gene31590:intron |
| TCGCCTACAATCACCGTCCA+TGG | 0.536280 | 1.1:+10656098 | MS.gene31590:CDS |
| CTTGGTTTATTAGCTGACAC+TGG | 0.537426 | 1.1:-10654459 | None:intergenic |
| CAATCATCCATTTCTGCCAC+CGG | 0.538002 | 1.1:+10653627 | MS.gene31590:CDS |
| TGAAGCGTCGTTTCCATGGA+CGG | 0.541190 | 1.1:-10656111 | None:intergenic |
| AGCATCGCGAAATTGTTGGC+TGG | 0.553901 | 1.1:-10655572 | None:intergenic |
| GTCGTCGATTGCTGTTTCGA+CGG | 0.555171 | 1.1:-10650915 | None:intergenic |
| AGTAGAGAAAATCAAACCAA+AGG | 0.561027 | 1.1:+10654483 | MS.gene31590:CDS |
| GGTGTCGGCGATGTTTGCTC+TGG | 0.562967 | 1.1:+10650974 | MS.gene31590:CDS |
| AGCACATTTGGCAGACCTTG+AGG | 0.572432 | 1.1:+10655362 | MS.gene31590:CDS |
| TCTGATGAAGATGATGAAGC+AGG | 0.584800 | 1.1:+10654543 | MS.gene31590:CDS |
| GGGTTTGTACTTTGTTCACA+AGG | 0.595616 | 1.1:-10654567 | None:intergenic |
| AATTAATTACCTGAACCTCA+AGG | 0.595756 | 1.1:-10655377 | None:intergenic |
| ATGGATCCATTCATCGGTGT+CGG | 0.602190 | 1.1:+10650959 | MS.gene31590:CDS |
| AGACTCAATAGTTGCAGTGA+TGG | 0.603647 | 1.1:-10653604 | None:intergenic |
| TATGGAGGTTGCTGGCAGAA+TGG | 0.618667 | 1.1:-10650819 | None:intergenic |
| GGAGTGACTACAACAACAAG+TGG | 0.619797 | 1.1:+10654504 | MS.gene31590:CDS |
| TTACTAGTGTTGATTTGTGG+CGG | 0.621086 | 1.1:-10656053 | None:intergenic |
| TGTAAGATGGATCCATTCAT+CGG | 0.623168 | 1.1:+10650953 | MS.gene31590:CDS |
| GCGAAACATGCGCCATACAA+CGG | 0.641264 | 1.1:-10656079 | None:intergenic |
| AATTTAGGTGAAGTTAGCAG+AGG | 0.643088 | 1.1:+10655956 | MS.gene31590:intron |
| ATGAATGGATCCATCTTACA+CGG | 0.644634 | 1.1:-10650950 | None:intergenic |
| TTCATCAGATGGATCACGTG+AGG | 0.658342 | 1.1:-10654529 | None:intergenic |
| GACCAGATTATGAAAATCGG+CGG | 0.666849 | 1.1:-10651011 | None:intergenic |
| CTAATCGCGAGTCTGCCAGA+AGG | 0.671078 | 1.1:+10655322 | MS.gene31590:CDS |
| AGTGTTGATTTGTGGCGGAG+TGG | 0.681459 | 1.1:-10656048 | None:intergenic |
| GCAGAGGATATGGTCTCTAG+GGG | 0.691454 | 1.1:+10655972 | MS.gene31590:CDS |
| ATCGAAGCTGGAGAATATGG+AGG | 0.698276 | 1.1:-10650834 | None:intergenic |
| TAAGACGCTTCATATCAACA+GGG | 0.724365 | 1.1:-10654587 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAAATCACATTTAA+AGG | - | chr1.1:10655142-10655161 | None:intergenic | 10.0% |
| !! | ATATAATAGTAAATATAAAG+TGG | + | chr1.1:10653948-10653967 | MS.gene31590:intron | 10.0% |
| !! | ATGATATATATAAACTATTA+TGG | - | chr1.1:10654396-10654415 | None:intergenic | 10.0% |
| !!! | AGAAATCATATTATTTTTTT+GGG | + | chr1.1:10654821-10654840 | MS.gene31590:intron | 10.0% |
| !!! | ATTTTTTTTTTTGTTACAAA+AGG | - | chr1.1:10655429-10655448 | None:intergenic | 10.0% |
| !!! | CATAATTTTAACATTTTAAT+TGG | - | chr1.1:10653841-10653860 | None:intergenic | 10.0% |
| !!! | GTTTTTAATTGAATTAATTT+TGG | - | chr1.1:10655248-10655267 | None:intergenic | 10.0% |
| !!! | TTTATTATATTTTGTTTCTT+AGG | + | chr1.1:10655498-10655517 | MS.gene31590:intron | 10.0% |
| !! | AAAAAAAGAAACAATTCATT+AGG | - | chr1.1:10653168-10653187 | None:intergenic | 15.0% |
| !! | AATTTATAGTAAGATGAATT+AGG | + | chr1.1:10652671-10652690 | MS.gene31590:intron | 15.0% |
| !! | ATAGAATACATCAATTATAA+AGG | - | chr1.1:10651425-10651444 | None:intergenic | 15.0% |
| !! | ATATAATAAAATTCTCATAG+TGG | - | chr1.1:10655488-10655507 | None:intergenic | 15.0% |
| !! | CAAAATAAAGAAATATAAAG+TGG | + | chr1.1:10653999-10654018 | MS.gene31590:intron | 15.0% |
| !! | GTAAAAAAAATGAATAGAAA+AGG | + | chr1.1:10652837-10652856 | MS.gene31590:intron | 15.0% |
| !! | TAAGTAATCTTATCTTATAT+TGG | - | chr1.1:10654260-10654279 | None:intergenic | 15.0% |
| !! | TTATGACAAAATAATAAATC+CGG | + | chr1.1:10651528-10651547 | MS.gene31590:intron | 15.0% |
| !!! | AAATCATATTATTTTTTTGG+GGG | + | chr1.1:10654823-10654842 | MS.gene31590:intron | 15.0% |
| !!! | AGACTAAATTTTACATTTTA+AGG | - | chr1.1:10651297-10651316 | None:intergenic | 15.0% |
| !!! | ATTTTTTAAATTCTCAATGT+TGG | + | chr1.1:10654656-10654675 | MS.gene31590:intron | 15.0% |
| !!! | ATTTTTTTTGTCTTTTACTT+TGG | + | chr1.1:10652044-10652063 | MS.gene31590:intron | 15.0% |
| !!! | CACTTTATATTTCTTTATTT+TGG | - | chr1.1:10654001-10654020 | None:intergenic | 15.0% |
| !!! | GAAATCATATTATTTTTTTG+GGG | + | chr1.1:10654822-10654841 | MS.gene31590:intron | 15.0% |
| !!! | GAGAAATCATATTATTTTTT+TGG | + | chr1.1:10654820-10654839 | MS.gene31590:intron | 15.0% |
| !!! | TTAGATACTTTTATTTCAAA+AGG | + | chr1.1:10652322-10652341 | MS.gene31590:intron | 15.0% |
| !!! | TTTCTATGTTGTTTTATTTA+GGG | + | chr1.1:10653091-10653110 | MS.gene31590:intron | 15.0% |
| !!! | TTTTCTATGTTGTTTTATTT+AGG | + | chr1.1:10653090-10653109 | MS.gene31590:intron | 15.0% |
| !!! | TTTTTTTTGTCTTTTACTTT+GGG | + | chr1.1:10652045-10652064 | MS.gene31590:intron | 15.0% |
| !! | AAATCATCATTTATTATTGC+TGG | + | chr1.1:10651168-10651187 | MS.gene31590:intron | 20.0% |
| !! | AATATAATAGAAAAGAAGAG+AGG | - | chr1.1:10652752-10652771 | None:intergenic | 20.0% |
| !! | AATATAATAGAACAACAACA+TGG | + | chr1.1:10652860-10652879 | MS.gene31590:intron | 20.0% |
| !! | ACAATGAAGTTATCTATAAA+GGG | - | chr1.1:10654333-10654352 | None:intergenic | 20.0% |
| !! | ACATGGATTTCTTAAATTTA+TGG | - | chr1.1:10654063-10654082 | None:intergenic | 20.0% |
| !! | AGAGAAATTATAATCTAACA+AGG | + | chr1.1:10654848-10654867 | MS.gene31590:intron | 20.0% |
| !! | ATATAATAGAAAAGAAGAGA+GGG | - | chr1.1:10652751-10652770 | None:intergenic | 20.0% |
| !! | ATATAATAGAACAACAACAT+GGG | + | chr1.1:10652861-10652880 | MS.gene31590:intron | 20.0% |
| !! | ATGGAATTTGGTATATTTAA+AGG | + | chr1.1:10651769-10651788 | MS.gene31590:intron | 20.0% |
| !! | ATTAACCAAACAACAAAAAT+AGG | - | chr1.1:10652556-10652575 | None:intergenic | 20.0% |
| !! | GAGATTTCTATTTGAATAAA+GGG | + | chr1.1:10652518-10652537 | MS.gene31590:intron | 20.0% |
| !! | TAAATATAAAGTGGAGTTTA+GGG | + | chr1.1:10653957-10653976 | MS.gene31590:intron | 20.0% |
| !! | TACAATGAAGTTATCTATAA+AGG | - | chr1.1:10654334-10654353 | None:intergenic | 20.0% |
| !! | TCTATCTTAATTCTTTGATT+TGG | - | chr1.1:10651722-10651741 | None:intergenic | 20.0% |
| !! | TGAGATTTCTATTTGAATAA+AGG | + | chr1.1:10652517-10652536 | MS.gene31590:intron | 20.0% |
| !! | TGGAATTTGGTATATTTAAA+GGG | + | chr1.1:10651770-10651789 | MS.gene31590:intron | 20.0% |
| !! | TTAACCAAACAACAAAAATA+GGG | - | chr1.1:10652555-10652574 | None:intergenic | 20.0% |
| !! | TTCAAAAAAATTCTCAATGT+TGG | + | chr1.1:10654683-10654702 | MS.gene31590:intron | 20.0% |
| !!! | AAATTGATTTTGGTATGTTT+TGG | + | chr1.1:10655041-10655060 | MS.gene31590:intron | 20.0% |
| !!! | AAGAATTTTATGTCCAATTT+AGG | + | chr1.1:10655941-10655960 | MS.gene31590:intron | 20.0% |
| !!! | AGAAATATGTTTCTTTTCTT+TGG | + | chr1.1:10653750-10653769 | MS.gene31590:intron | 20.0% |
| !!! | ATATATCATAGAGCTTATTT+TGG | + | chr1.1:10654407-10654426 | MS.gene31590:intron | 20.0% |
| !!! | ATGAACATCTTTTTTTTTTG+TGG | - | chr1.1:10652210-10652229 | None:intergenic | 20.0% |
| !!! | ATGATTTTTTACCTTCTTTA+AGG | - | chr1.1:10653223-10653242 | None:intergenic | 20.0% |
| !!! | ATTAAAGAAGAACTTTTACT+AGG | + | chr1.1:10654736-10654755 | MS.gene31590:intron | 20.0% |
| !!! | ATTATAAAGGTTGATTTGAT+TGG | - | chr1.1:10651412-10651431 | None:intergenic | 20.0% |
| !!! | CATTTTTTTCCTGAATTAAT+AGG | - | chr1.1:10653286-10653305 | None:intergenic | 20.0% |
| !!! | GAGTTTTTTTTTTATGTGAA+TGG | + | chr1.1:10651750-10651769 | MS.gene31590:intron | 20.0% |
| !!! | GTATCACTACAATTTTAATT+TGG | - | chr1.1:10651620-10651639 | None:intergenic | 20.0% |
| !!! | TACATTTTAAGGTGAATAAT+CGG | - | chr1.1:10651286-10651305 | None:intergenic | 20.0% |
| !!! | TATATAACATAGAGTATTAC+CGG | - | chr1.1:10653649-10653668 | None:intergenic | 20.0% |
| !!! | TATATTTACTTTTCATGAAG+TGG | + | chr1.1:10652977-10652996 | MS.gene31590:intron | 20.0% |
| !!! | TCAATAATTCATGTTTGTTT+TGG | - | chr1.1:10651655-10651674 | None:intergenic | 20.0% |
| !!! | TGAAGACTTAAAATTGATTT+TGG | + | chr1.1:10655031-10655050 | MS.gene31590:intron | 20.0% |
| !!! | TGCATATTTGAATTTACTTT+TGG | + | chr1.1:10654990-10655009 | MS.gene31590:intron | 20.0% |
| !!! | TTCTATGTTGTTTTATTTAG+GGG | + | chr1.1:10653092-10653111 | MS.gene31590:intron | 20.0% |
| !!! | TTTGCCAAAAATATTTTGTT+GGG | + | chr1.1:10655873-10655892 | MS.gene31590:intron | 20.0% |
| !!! | TTTTGCCAAAAATATTTTGT+TGG | + | chr1.1:10655872-10655891 | MS.gene31590:intron | 20.0% |
| !!! | TTTTGGATTGAATTGTATAA+TGG | + | chr1.1:10654424-10654443 | MS.gene31590:intron | 20.0% |
| !!! | TTTTTAATAGTGTTTGATTG+AGG | - | chr1.1:10652776-10652795 | None:intergenic | 20.0% |
| !!! | TTTTTTATGTGAATGGAATT+TGG | + | chr1.1:10651757-10651776 | MS.gene31590:intron | 20.0% |
| ! | AAAAATGTTGTGTGACATAT+CGG | + | chr1.1:10655751-10655770 | MS.gene31590:intron | 25.0% |
| ! | AATAAAGACGTGTAAATGAA+AGG | + | chr1.1:10653192-10653211 | MS.gene31590:intron | 25.0% |
| ! | ACATGTTGAAAATGAAGTTA+CGG | - | chr1.1:10653526-10653545 | None:intergenic | 25.0% |
| ! | ATAAAGTGGAGTCTTAAAAT+AGG | + | chr1.1:10654013-10654032 | MS.gene31590:intron | 25.0% |
| ! | ATAACTAGTGATTTCAAAGA+TGG | - | chr1.1:10655452-10655471 | None:intergenic | 25.0% |
| ! | CAATAATTCTATTACTAGCT+AGG | - | chr1.1:10653004-10653023 | None:intergenic | 25.0% |
| ! | GAAATTATAATCTAACAAGG+TGG | + | chr1.1:10654851-10654870 | MS.gene31590:intron | 25.0% |
| ! | GACAAATTGAAAAGGAATAT+AGG | + | chr1.1:10652815-10652834 | MS.gene31590:intron | 25.0% |
| ! | GCTACATATGAAAATTTGAT+AGG | + | chr1.1:10653243-10653262 | MS.gene31590:intron | 25.0% |
| ! | GTAAATATAAAGTGGAGTTT+AGG | + | chr1.1:10653956-10653975 | MS.gene31590:intron | 25.0% |
| ! | TAATATATAAACTCATCGTC+TGG | - | chr1.1:10654797-10654816 | None:intergenic | 25.0% |
| ! | TAGAAAAGCTAAGCTATAAA+AGG | - | chr1.1:10653077-10653096 | None:intergenic | 25.0% |
| ! | TATAATTGACAACCAAACTT+TGG | + | chr1.1:10652454-10652473 | MS.gene31590:intron | 25.0% |
| ! | TCATTTATTATTGCTGGTAA+TGG | + | chr1.1:10651174-10651193 | MS.gene31590:intron | 25.0% |
| ! | TTACAAGTGACAAATTGAAA+AGG | + | chr1.1:10652807-10652826 | MS.gene31590:intron | 25.0% |
| ! | TTACGATTAGATTGCAAAAA+CGG | + | chr1.1:10655681-10655700 | MS.gene31590:intron | 25.0% |
| ! | TTTCTATTTGAATAAAGGGA+TGG | + | chr1.1:10652522-10652541 | MS.gene31590:intron | 25.0% |
| ! | TTTGCTAGCAAAATTTATAC+TGG | - | chr1.1:10653692-10653711 | None:intergenic | 25.0% |
| !! | AAAATTCTCATAGTGGAAAT+TGG | - | chr1.1:10655481-10655500 | None:intergenic | 25.0% |
| !! | CATATTTGTTAAGAGTCTAT+TGG | - | chr1.1:10652949-10652968 | None:intergenic | 25.0% |
| !! | GACTAATACAAGGTTTTTAT+TGG | + | chr1.1:10652347-10652366 | MS.gene31590:intron | 25.0% |
| !! | GCTATAATTCATTCTTTTCT+TGG | - | chr1.1:10652725-10652744 | None:intergenic | 25.0% |
| !! | GGACATAATTTTCTTATAGA+AGG | - | chr1.1:10652899-10652918 | None:intergenic | 25.0% |
| !! | GGATTTATCTAGTTCAAAAT+AGG | - | chr1.1:10654776-10654795 | None:intergenic | 25.0% |
| !! | TATCCCCAACAAAATATTTT+TGG | - | chr1.1:10655880-10655899 | None:intergenic | 25.0% |
| !! | TTACATGAATTTGATGATCT+TGG | - | chr1.1:10655832-10655851 | None:intergenic | 25.0% |
| !! | TTAGAGTAATGTTATTTGTC+TGG | - | chr1.1:10653449-10653468 | None:intergenic | 25.0% |
| !! | TTGCCAAAAATATTTTGTTG+GGG | + | chr1.1:10655874-10655893 | MS.gene31590:intron | 25.0% |
| !!! | AACATCTTTTTTTTTTGTGG+TGG | - | chr1.1:10652207-10652226 | None:intergenic | 25.0% |
| !!! | ACATTTTAAGGTGAATAATC+GGG | - | chr1.1:10651285-10651304 | None:intergenic | 25.0% |
| !!! | ATTAGAGATATTCAAGTTGT+TGG | + | chr1.1:10651482-10651501 | MS.gene31590:intron | 25.0% |
| !!! | CAAACAAGAGTATTATTTGT+TGG | - | chr1.1:10653555-10653574 | None:intergenic | 25.0% |
| !!! | CTTTATTTTGGTACAAAAGA+GGG | - | chr1.1:10653989-10654008 | None:intergenic | 25.0% |
| !!! | CTTTTCTTGGTTAGTTTTTT+AGG | - | chr1.1:10652712-10652731 | None:intergenic | 25.0% |
| !!! | GAATTCTTGATTTGTAATCA+CGG | - | chr1.1:10655788-10655807 | None:intergenic | 25.0% |
| !!! | GGGATTTTTAAGATAATTGT+AGG | + | chr1.1:10654103-10654122 | MS.gene31590:intron | 25.0% |
| !!! | TCTTTATTTTGGTACAAAAG+AGG | - | chr1.1:10653990-10654009 | None:intergenic | 25.0% |
| !!! | TGTTTGTTTTGGTAGAATTA+CGG | - | chr1.1:10651644-10651663 | None:intergenic | 25.0% |
| !!! | TTTGATTTATACCTTTTGCT+TGG | + | chr1.1:10653129-10653148 | MS.gene31590:intron | 25.0% |
| AAGAAGAAAACAAGCACATT+TGG | + | chr1.1:10655350-10655369 | MS.gene31590:CDS | 30.0% | |
| AATCCATGTAATCATGAAGT+TGG | + | chr1.1:10654074-10654093 | MS.gene31590:intron | 30.0% | |
| AATTAATTACCTGAACCTCA+AGG | - | chr1.1:10655380-10655399 | None:intergenic | 30.0% | |
| ACTGAAACATGAACATCTAA+AGG | - | chr1.1:10652115-10652134 | None:intergenic | 30.0% | |
| ACTGACCAGATTATGAAAAT+CGG | - | chr1.1:10651017-10651036 | None:intergenic | 30.0% | |
| AGAAAATTATGTCCAATGCA+TGG | + | chr1.1:10652905-10652924 | MS.gene31590:intron | 30.0% | |
| AGTAGAGAAAATCAAACCAA+AGG | + | chr1.1:10654483-10654502 | MS.gene31590:CDS | 30.0% | |
| AGTCAAACATTAAACATGCA+TGG | + | chr1.1:10652291-10652310 | MS.gene31590:intron | 30.0% | |
| AGTTGACAACCTATTAATTC+AGG | + | chr1.1:10653274-10653293 | MS.gene31590:intron | 30.0% | |
| ATAGCGAATAACCATTGTAT+TGG | - | chr1.1:10652381-10652400 | None:intergenic | 30.0% | |
| ATATTTAAAGGGTGAAGCAA+AGG | + | chr1.1:10651781-10651800 | MS.gene31590:intron | 30.0% | |
| CAAACTATATAACTTCAAGC+TGG | - | chr1.1:10655110-10655129 | None:intergenic | 30.0% | |
| CAATCTAATCGTAATACACA+TGG | - | chr1.1:10655675-10655694 | None:intergenic | 30.0% | |
| CATGTGATATTGAAGAAACT+TGG | - | chr1.1:10652643-10652662 | None:intergenic | 30.0% | |
| CTTCAAAGATATACTTCAAC+CGG | - | chr1.1:10651550-10651569 | None:intergenic | 30.0% | |
| GAAAGGAATATCCTTAAAGA+AGG | + | chr1.1:10653209-10653228 | MS.gene31590:intron | 30.0% | |
| TAATACAACCGTAGTTAGTA+GGG | - | chr1.1:10651119-10651138 | None:intergenic | 30.0% | |
| TACACTCTTAATGTGATTTC+AGG | + | chr1.1:10655292-10655311 | MS.gene31590:intron | 30.0% | |
| TATCAAAGTAGAAACTCCAA+AGG | - | chr1.1:10651205-10651224 | None:intergenic | 30.0% | |
| TCAAAAGGAAGACTAATACA+AGG | + | chr1.1:10652337-10652356 | MS.gene31590:intron | 30.0% | |
| TCACATAGCTAGAATTTGAT+TGG | + | chr1.1:10653375-10653394 | MS.gene31590:intron | 30.0% | |
| TGTAATTATGACTGTTGCAT+TGG | - | chr1.1:10654288-10654307 | None:intergenic | 30.0% | |
| TTAATACAACCGTAGTTAGT+AGG | - | chr1.1:10651120-10651139 | None:intergenic | 30.0% | |
| ! | ACTTTGTTTAGTGATGAAGA+AGG | + | chr1.1:10651830-10651849 | MS.gene31590:intron | 30.0% |
| ! | ATTTTCTTATAGAAGGCCAA+AGG | - | chr1.1:10652892-10652911 | None:intergenic | 30.0% |
| ! | CAGTGTACTTTTACTACTTT+AGG | - | chr1.1:10654940-10654959 | None:intergenic | 30.0% |
| ! | CTTTTTGTGTTATGATGCAA+TGG | + | chr1.1:10654188-10654207 | MS.gene31590:intron | 30.0% |
| ! | GTAACTTCATTTTCAACATG+TGG | + | chr1.1:10653525-10653544 | MS.gene31590:CDS | 30.0% |
| !! | AGATTACTAGTGTTGATTTG+TGG | - | chr1.1:10656059-10656078 | None:intergenic | 30.0% |
| !! | GAATAACCATTGTATTGGTT+TGG | - | chr1.1:10652376-10652395 | None:intergenic | 30.0% |
| !! | TGTTCAATTGACTCTGATTT+TGG | - | chr1.1:10656028-10656047 | None:intergenic | 30.0% |
| !!! | AGTTTTTTAGGAGAAGCATA+GGG | - | chr1.1:10652700-10652719 | None:intergenic | 30.0% |
| !!! | GAAACCCTATTTTTGTTGTT+TGG | + | chr1.1:10652548-10652567 | MS.gene31590:intron | 30.0% |
| !!! | TAGTTTTTTAGGAGAAGCAT+AGG | - | chr1.1:10652701-10652720 | None:intergenic | 30.0% |
| !!! | TCTTTTTTTTTTGTGGTGGT+CGG | - | chr1.1:10652203-10652222 | None:intergenic | 30.0% |
| AAACGTTTCCCTACTAACTA+CGG | + | chr1.1:10651108-10651127 | MS.gene31590:intron | 35.0% | |
| AAGGGCTGAATTAAGAACAA+TGG | - | chr1.1:10653488-10653507 | None:intergenic | 35.0% | |
| AAGTTCTATCACAAAACCAC+AGG | - | chr1.1:10651692-10651711 | None:intergenic | 35.0% | |
| AATCATGAAGTTGGCAAGTT+GGG | + | chr1.1:10654083-10654102 | MS.gene31590:intron | 35.0% | |
| AATTATGACTGTTGCATTGG+TGG | - | chr1.1:10654285-10654304 | None:intergenic | 35.0% | |
| AATTTAGGTGAAGTTAGCAG+AGG | + | chr1.1:10655956-10655975 | MS.gene31590:intron | 35.0% | |
| ACATGGAAGAACTTGTAAAG+TGG | - | chr1.1:10655658-10655677 | None:intergenic | 35.0% | |
| ACCTAATAGATACCATGCAT+TGG | - | chr1.1:10652920-10652939 | None:intergenic | 35.0% | |
| AGAAGCTGGTTGTTAAAAGT+AGG | - | chr1.1:10656005-10656024 | None:intergenic | 35.0% | |
| AGCTCTTAAAGCTTCAACAT+CGG | - | chr1.1:10655623-10655642 | None:intergenic | 35.0% | |
| ATCATACATGTGATCGTATG+TGG | - | chr1.1:10653356-10653375 | None:intergenic | 35.0% | |
| ATGAATGGATCCATCTTACA+CGG | - | chr1.1:10650953-10650972 | None:intergenic | 35.0% | |
| ATTATTGCCCACAATCTTAG+TGG | + | chr1.1:10653017-10653036 | MS.gene31590:intron | 35.0% | |
| CATCTGTAAGCTGCTTAAAT+AGG | - | chr1.1:10655552-10655571 | None:intergenic | 35.0% | |
| CATGTACATGATGACAATAG+AGG | + | chr1.1:10654910-10654929 | MS.gene31590:intron | 35.0% | |
| CCATAAATTCTCTCTGCATA+AGG | + | chr1.1:10652250-10652269 | MS.gene31590:intron | 35.0% | |
| CCTTATGCAGAGAGAATTTA+TGG | - | chr1.1:10652253-10652272 | None:intergenic | 35.0% | |
| CTATTGTCATCATGTACATG+TGG | - | chr1.1:10654910-10654929 | None:intergenic | 35.0% | |
| CTCTTAATGTGATTTCAGGA+AGG | + | chr1.1:10655296-10655315 | MS.gene31590:intron | 35.0% | |
| GATATTGAAGAAACTTGGAG+AGG | - | chr1.1:10652638-10652657 | None:intergenic | 35.0% | |
| GCATAAGGTGATTATTTACG+AGG | + | chr1.1:10652265-10652284 | MS.gene31590:intron | 35.0% | |
| GTGTTCAACTTTCACGTTAA+CGG | + | chr1.1:10655169-10655188 | MS.gene31590:intron | 35.0% | |
| TAAGACGCTTCATATCAACA+GGG | - | chr1.1:10654590-10654609 | None:intergenic | 35.0% | |
| TAATCATGAAGTTGGCAAGT+TGG | + | chr1.1:10654082-10654101 | MS.gene31590:intron | 35.0% | |
| TCCAATGCATGGTATCTATT+AGG | + | chr1.1:10652916-10652935 | MS.gene31590:intron | 35.0% | |
| TCTGCTAACTTCACCTAAAT+TGG | - | chr1.1:10655957-10655976 | None:intergenic | 35.0% | |
| TGCAGTCATGATTTCAACAA+TGG | + | chr1.1:10656188-10656207 | MS.gene31590:CDS | 35.0% | |
| TGCATAGTATATGCAAAGTC+CGG | + | chr1.1:10652167-10652186 | MS.gene31590:intron | 35.0% | |
| TGTAAGATGGATCCATTCAT+CGG | + | chr1.1:10650953-10650972 | MS.gene31590:CDS | 35.0% | |
| TGTGTTATGATGCAATGGTT+GGG | + | chr1.1:10654193-10654212 | MS.gene31590:intron | 35.0% | |
| TTATTGCCCACAATCTTAGT+GGG | + | chr1.1:10653018-10653037 | MS.gene31590:intron | 35.0% | |
| TTGCCAACTTCATGATTACA+TGG | - | chr1.1:10654080-10654099 | None:intergenic | 35.0% | |
| TTGTGTTATGATGCAATGGT+TGG | + | chr1.1:10654192-10654211 | MS.gene31590:intron | 35.0% | |
| TTTGTAATCACGGTATGTGT+TGG | - | chr1.1:10655778-10655797 | None:intergenic | 35.0% | |
| ! | ATAACATAGAGTATTACCGG+TGG | - | chr1.1:10653646-10653665 | None:intergenic | 35.0% |
| ! | ATCAATCTTTTCGCTTCCTT+CGG | - | chr1.1:10652493-10652512 | None:intergenic | 35.0% |
| ! | ATGTTGTCTTTTGAACTCGT+GGG | + | chr1.1:10651982-10652001 | MS.gene31590:intron | 35.0% |
| ! | ATTATGACTGTTGCATTGGT+GGG | - | chr1.1:10654284-10654303 | None:intergenic | 35.0% |
| ! | GTTTTTGCTTTCCAAGCAAA+AGG | - | chr1.1:10653143-10653162 | None:intergenic | 35.0% |
| ! | TATGTTGTCTTTTGAACTCG+TGG | + | chr1.1:10651981-10652000 | MS.gene31590:intron | 35.0% |
| ! | TTGATATGAAGCGTCTTAGA+AGG | + | chr1.1:10654592-10654611 | MS.gene31590:CDS | 35.0% |
| ! | TTGATCATGAACTTTTCACG+AGG | + | chr1.1:10650882-10650901 | MS.gene31590:CDS | 35.0% |
| !! | AGAGATATTCAAGTTGTTGG+AGG | + | chr1.1:10651485-10651504 | MS.gene31590:intron | 35.0% |
| !! | ATGTGCTTGTTTTCTTCTTC+TGG | - | chr1.1:10655349-10655368 | None:intergenic | 35.0% |
| !! | GTTTGATTTTCTCTACTGCT+TGG | - | chr1.1:10654480-10654499 | None:intergenic | 35.0% |
| !! | TAAAGTGGAGTTTAGGGTTT+TGG | + | chr1.1:10653963-10653982 | MS.gene31590:intron | 35.0% |
| !! | TGTTGAAGCTTTAAGAGCTA+AGG | + | chr1.1:10655624-10655643 | MS.gene31590:CDS | 35.0% |
| !! | TTACTAGTGTTGATTTGTGG+CGG | - | chr1.1:10656056-10656075 | None:intergenic | 35.0% |
| !!! | CTTTTTTTTTTGTGGTGGTC+GGG | - | chr1.1:10652202-10652221 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGTCG+GGG | - | chr1.1:10652201-10652220 | None:intergenic | 35.0% |
| AAGCTTGAAAGTCACGTTAG+AGG | - | chr1.1:10651082-10651101 | None:intergenic | 40.0% | |
| AGACTCAATAGTTGCAGTGA+TGG | - | chr1.1:10653607-10653626 | None:intergenic | 40.0% | |
| AGTGGACAGAATTCAGCTAT+TGG | + | chr1.1:10656143-10656162 | MS.gene31590:CDS | 40.0% | |
| ATTATGAAAATCGGCGGTGT+CGG | - | chr1.1:10651008-10651027 | None:intergenic | 40.0% | |
| ATTCAGCCCTTCATAATTGC+AGG | + | chr1.1:10653497-10653516 | MS.gene31590:intron | 40.0% | |
| ATTCTGCTGTGATCCATTTG+AGG | - | chr1.1:10650862-10650881 | None:intergenic | 40.0% | |
| CACTAGTAATCTCCGTTGTA+TGG | + | chr1.1:10656067-10656086 | MS.gene31590:CDS | 40.0% | |
| CAGAATTCAGCTATTGGACT+TGG | + | chr1.1:10656149-10656168 | MS.gene31590:CDS | 40.0% | |
| CATAGTATATGCAAAGTCCG+GGG | + | chr1.1:10652169-10652188 | MS.gene31590:intron | 40.0% | |
| CGATGTAAAACCGTGTAAGA+TGG | + | chr1.1:10650940-10650959 | MS.gene31590:CDS | 40.0% | |
| CGATTAGATTGCAAAAACGG+AGG | + | chr1.1:10655684-10655703 | MS.gene31590:intron | 40.0% | |
| CTAAGACGCTTCATATCAAC+AGG | - | chr1.1:10654591-10654610 | None:intergenic | 40.0% | |
| CTTGGTTTATTAGCTGACAC+TGG | - | chr1.1:10654462-10654481 | None:intergenic | 40.0% | |
| GAAAGCAAACATGAAACCTG+TGG | + | chr1.1:10651673-10651692 | MS.gene31590:intron | 40.0% | |
| GACCAGATTATGAAAATCGG+CGG | - | chr1.1:10651014-10651033 | None:intergenic | 40.0% | |
| GCATAGTATATGCAAAGTCC+GGG | + | chr1.1:10652168-10652187 | MS.gene31590:intron | 40.0% | |
| GCTTCATCATCTTCATCAGA+TGG | - | chr1.1:10654543-10654562 | None:intergenic | 40.0% | |
| GGGTTTGTACTTTGTTCACA+AGG | - | chr1.1:10654570-10654589 | None:intergenic | 40.0% | |
| GTGTTATGATGCAATGGTTG+GGG | + | chr1.1:10654194-10654213 | MS.gene31590:intron | 40.0% | |
| TCTGATGAAGATGATGAAGC+AGG | + | chr1.1:10654543-10654562 | MS.gene31590:CDS | 40.0% | |
| TGAAGCAAAGGAACTTGTGA+AGG | + | chr1.1:10651793-10651812 | MS.gene31590:intron | 40.0% | |
| TGAGAGACATGTCCAAAGTT+TGG | - | chr1.1:10652469-10652488 | None:intergenic | 40.0% | |
| TGGCTTCCAAACCAATACAA+TGG | + | chr1.1:10652367-10652386 | MS.gene31590:intron | 40.0% | |
| TGTTAGCATCGCGAAATTGT+TGG | - | chr1.1:10655579-10655598 | None:intergenic | 40.0% | |
| TGTTGTTGTAGTCACTCCTT+TGG | - | chr1.1:10654502-10654521 | None:intergenic | 40.0% | |
| ! | ATCATGAACTTTTCACGAGG+CGG | + | chr1.1:10650885-10650904 | MS.gene31590:CDS | 40.0% |
| ! | TTATGACTGTTGCATTGGTG+GGG | - | chr1.1:10654283-10654302 | None:intergenic | 40.0% |
| ! | TTTTCTTCTTCTGGACCTTC+TGG | - | chr1.1:10655340-10655359 | None:intergenic | 40.0% |
| !! | CAACATCGGATTTTAGCACT+CGG | - | chr1.1:10655609-10655628 | None:intergenic | 40.0% |
| !! | TGAGCTCTTTGACTAGCTTA+TGG | + | chr1.1:10656228-10656247 | MS.gene31590:CDS | 40.0% |
| !! | TTTCTTAGGTTGAACAGCTG+AGG | + | chr1.1:10655512-10655531 | MS.gene31590:intron | 40.0% |
| !!! | GCTGGTAATGGTTTTTCCTT+TGG | + | chr1.1:10651186-10651205 | MS.gene31590:intron | 40.0% |
| AACAACATGGGTCGTTCCTT+TGG | + | chr1.1:10652873-10652892 | MS.gene31590:intron | 45.0% | |
| AACACTCCACCTCTTTCACA+AGG | - | chr1.1:10653045-10653064 | None:intergenic | 45.0% | |
| ACAAGGACCCACTAAGATTG+TGG | - | chr1.1:10653028-10653047 | None:intergenic | 45.0% | |
| ACGGCATCCTGCAATTATGA+AGG | - | chr1.1:10653507-10653526 | None:intergenic | 45.0% | |
| AGCAGAGGATATGGTCTCTA+GGG | + | chr1.1:10655971-10655990 | MS.gene31590:CDS | 45.0% | |
| AGTATTACCGGTGGCAGAAA+TGG | - | chr1.1:10653637-10653656 | None:intergenic | 45.0% | |
| ATCGAAGCTGGAGAATATGG+AGG | - | chr1.1:10650837-10650856 | None:intergenic | 45.0% | |
| ATGGATCCATTCATCGGTGT+CGG | + | chr1.1:10650959-10650978 | MS.gene31590:CDS | 45.0% | |
| CAAGGACCCACTAAGATTGT+GGG | - | chr1.1:10653027-10653046 | None:intergenic | 45.0% | |
| CAATCATCCATTTCTGCCAC+CGG | + | chr1.1:10653627-10653646 | MS.gene31590:CDS | 45.0% | |
| CATGGAAACGACGCTTCATA+TGG | + | chr1.1:10656116-10656135 | MS.gene31590:CDS | 45.0% | |
| CGGCATCCTGCAATTATGAA+GGG | - | chr1.1:10653506-10653525 | None:intergenic | 45.0% | |
| CTCAATAGTTGCAGTGATGG+TGG | - | chr1.1:10653604-10653623 | None:intergenic | 45.0% | |
| GGAGTGACTACAACAACAAG+TGG | + | chr1.1:10654504-10654523 | MS.gene31590:CDS | 45.0% | |
| GGTGAAGTTAGCAGAGGATA+TGG | + | chr1.1:10655962-10655981 | MS.gene31590:intron | 45.0% | |
| GTCATCGAAGCTGGAGAATA+TGG | - | chr1.1:10650840-10650859 | None:intergenic | 45.0% | |
| TAGCAGAGGATATGGTCTCT+AGG | + | chr1.1:10655970-10655989 | MS.gene31590:CDS | 45.0% | |
| TGGGAACGCACTACTTTATG+AGG | + | chr1.1:10652001-10652020 | MS.gene31590:intron | 45.0% | |
| TTCATCAGATGGATCACGTG+AGG | - | chr1.1:10654532-10654551 | None:intergenic | 45.0% | |
| TTTCCATGGACGGTGATTGT+AGG | - | chr1.1:10656104-10656123 | None:intergenic | 45.0% | |
| ! | AAACAAAGTCCCTGATGACG+TGG | - | chr1.1:10651819-10651838 | None:intergenic | 45.0% |
| ! | AGTTCTTGGGAGTGAGGTTT+TGG | - | chr1.1:10653581-10653600 | None:intergenic | 45.0% |
| ! | GACGCTTCATATGGTGTTAG+TGG | + | chr1.1:10656125-10656144 | MS.gene31590:CDS | 45.0% |
| ! | GTTCTTGGGAGTGAGGTTTT+GGG | - | chr1.1:10653580-10653599 | None:intergenic | 45.0% |
| ! | TTAGTGGGTCCTTGTGAAAG+AGG | + | chr1.1:10653033-10653052 | MS.gene31590:intron | 45.0% |
| !! | ATTGCTGTTTCGACGGTAAC+AGG | - | chr1.1:10650911-10650930 | None:intergenic | 45.0% |
| !! | CATATGAAGCGTCGTTTCCA+TGG | - | chr1.1:10656118-10656137 | None:intergenic | 45.0% |
| !! | GACTCTGATTTTGGAGAAGC+TGG | - | chr1.1:10656019-10656038 | None:intergenic | 45.0% |
| !!! | CACCGCCGATTTTCATAATC+TGG | + | chr1.1:10651009-10651028 | MS.gene31590:CDS | 45.0% |
| AGCACATTTGGCAGACCTTG+AGG | + | chr1.1:10655362-10655381 | MS.gene31590:CDS | 50.0% | |
| AGCATCGCGAAATTGTTGGC+TGG | - | chr1.1:10655575-10655594 | None:intergenic | 50.0% | |
| CCAGCTTCGATGACCTCAAA+TGG | + | chr1.1:10650846-10650865 | MS.gene31590:CDS | 50.0% | |
| CTGGAGAATATGGAGGTTGC+TGG | - | chr1.1:10650830-10650849 | None:intergenic | 50.0% | |
| GCAGAGGATATGGTCTCTAG+GGG | + | chr1.1:10655972-10655991 | MS.gene31590:CDS | 50.0% | |
| GCGAAACATGCGCCATACAA+CGG | - | chr1.1:10656082-10656101 | None:intergenic | 50.0% | |
| TATGGAGGTTGCTGGCAGAA+TGG | - | chr1.1:10650822-10650841 | None:intergenic | 50.0% | |
| TGGACATGTCTCTCAACCGA+AGG | + | chr1.1:10652474-10652493 | MS.gene31590:intron | 50.0% | |
| TTGTGAAGGCCACGTCATCA+GGG | + | chr1.1:10651807-10651826 | MS.gene31590:intron | 50.0% | |
| TTTGGCAGACCTTGAGGTTC+AGG | + | chr1.1:10655368-10655387 | MS.gene31590:CDS | 50.0% | |
| ! | CCATTTGAGGTCATCGAAGC+TGG | - | chr1.1:10650849-10650868 | None:intergenic | 50.0% |
| ! | GGCAGAATGGTGCTCCATTT+TGG | - | chr1.1:10650809-10650828 | None:intergenic | 50.0% |
| !! | AGTGTTGATTTGTGGCGGAG+TGG | - | chr1.1:10656051-10656070 | None:intergenic | 50.0% |
| !! | GCAGTGATGGTGGAGTTCTT+GGG | - | chr1.1:10653594-10653613 | None:intergenic | 50.0% |
| !! | GTCGTCGATTGCTGTTTCGA+CGG | - | chr1.1:10650918-10650937 | None:intergenic | 50.0% |
| !! | TGAAGCGTCGTTTCCATGGA+CGG | - | chr1.1:10656114-10656133 | None:intergenic | 50.0% |
| !! | TGCAGTGATGGTGGAGTTCT+TGG | - | chr1.1:10653595-10653614 | None:intergenic | 50.0% |
| !! | TTAGGTTGAACAGCTGAGGC+TGG | + | chr1.1:10655516-10655535 | MS.gene31590:intron | 50.0% |
| ACATCGCCGACACCGATGAA+TGG | - | chr1.1:10650968-10650987 | None:intergenic | 55.0% | |
| CTAATCGCGAGTCTGCCAGA+AGG | + | chr1.1:10655322-10655341 | MS.gene31590:CDS | 55.0% | |
| CTTGTGAAGGCCACGTCATC+AGG | + | chr1.1:10651806-10651825 | MS.gene31590:intron | 55.0% | |
| GTGGGTCCTTGTGAAAGAGG+TGG | + | chr1.1:10653036-10653055 | MS.gene31590:intron | 55.0% | |
| TCGCCTACAATCACCGTCCA+TGG | + | chr1.1:10656098-10656117 | MS.gene31590:CDS | 55.0% | |
| TGGTGGAGTTCTTGGGAGTG+AGG | - | chr1.1:10653587-10653606 | None:intergenic | 55.0% | |
| !! | GGTGTCGGCGATGTTTGCTC+TGG | + | chr1.1:10650974-10650993 | MS.gene31590:CDS | 60.0% |
| GGTGGTCGGGGTTTGAACCC+CGG | - | chr1.1:10652189-10652208 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 10650800 | 10656256 | 10650800 | ID=MS.gene31590 |
| chr1.1 | mRNA | 10650800 | 10656256 | 10650800 | ID=MS.gene31590.t1;Parent=MS.gene31590 |
| chr1.1 | exon | 10650800 | 10651030 | 10650800 | ID=MS.gene31590.t1.exon1;Parent=MS.gene31590.t1 |
| chr1.1 | CDS | 10650800 | 10651030 | 10650800 | ID=cds.MS.gene31590.t1;Parent=MS.gene31590.t1 |
| chr1.1 | exon | 10653519 | 10653648 | 10653519 | ID=MS.gene31590.t1.exon2;Parent=MS.gene31590.t1 |
| chr1.1 | CDS | 10653519 | 10653648 | 10653519 | ID=cds.MS.gene31590.t1;Parent=MS.gene31590.t1 |
| chr1.1 | exon | 10654451 | 10654613 | 10654451 | ID=MS.gene31590.t1.exon3;Parent=MS.gene31590.t1 |
| chr1.1 | CDS | 10654451 | 10654613 | 10654451 | ID=cds.MS.gene31590.t1;Parent=MS.gene31590.t1 |
| chr1.1 | exon | 10655314 | 10655389 | 10655314 | ID=MS.gene31590.t1.exon4;Parent=MS.gene31590.t1 |
| chr1.1 | CDS | 10655314 | 10655389 | 10655314 | ID=cds.MS.gene31590.t1;Parent=MS.gene31590.t1 |
| chr1.1 | exon | 10655520 | 10655645 | 10655520 | ID=MS.gene31590.t1.exon5;Parent=MS.gene31590.t1 |
| chr1.1 | CDS | 10655520 | 10655645 | 10655520 | ID=cds.MS.gene31590.t1;Parent=MS.gene31590.t1 |
| chr1.1 | exon | 10655963 | 10656256 | 10655963 | ID=MS.gene31590.t1.exon6;Parent=MS.gene31590.t1 |
| chr1.1 | CDS | 10655963 | 10656256 | 10655963 | ID=cds.MS.gene31590.t1;Parent=MS.gene31590.t1 |
| Gene Sequence |
| Protein sequence |
