Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059104.t1 | XP_003588595.1 | 95.9 | 339 | 12 | 2 | 1 | 338 | 1 | 338 | 4.60E-171 | 610.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059104.t1 | Q9FUD3 | 50.6 | 235 | 88 | 6 | 112 | 338 | 62 | 276 | 1.0e-41 | 172.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059104.t1 | G7I545 | 95.9 | 339 | 12 | 2 | 1 | 338 | 1 | 338 | 3.3e-171 | 610.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene059104.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059104 | MS.gene059481 | 0.806438 | 8.23E-50 | -1.69E-46 |
| MS.gene059104 | MS.gene059482 | 0.818114 | 2.32E-52 | -1.69E-46 |
| MS.gene059104 | MS.gene059483 | 0.825633 | 4.21E-54 | -1.69E-46 |
| MS.gene059104 | MS.gene31590 | 0.891753 | 2.98E-74 | -1.69E-46 |
| MS.gene059104 | MS.gene62867 | 0.819933 | 8.95E-53 | -1.69E-46 |
| MS.gene059104 | MS.gene68005 | 0.833477 | 5.22E-56 | -1.69E-46 |
| MS.gene059104 | MS.gene71909 | 0.817211 | 3.71E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059104.t1 | MTR_1g008990 | 95.870 | 339 | 12 | 2 | 1 | 338 | 1 | 338 | 0.0 | 632 |
| MS.gene059104.t1 | MTR_1g008990 | 94.309 | 246 | 12 | 2 | 1 | 245 | 1 | 245 | 6.21e-157 | 440 |
| MS.gene059104.t1 | MTR_3g109310 | 63.082 | 279 | 77 | 12 | 69 | 338 | 33 | 294 | 1.14e-98 | 293 |
| MS.gene059104.t1 | MTR_3g110010 | 66.929 | 127 | 38 | 4 | 175 | 298 | 633 | 758 | 1.19e-38 | 146 |
| MS.gene059104.t1 | MTR_3g109982 | 66.142 | 127 | 39 | 4 | 175 | 298 | 649 | 774 | 2.87e-38 | 145 |
| MS.gene059104.t1 | MTR_1g080920 | 52.857 | 140 | 62 | 2 | 124 | 259 | 161 | 300 | 4.61e-27 | 110 |
| MS.gene059104.t1 | MTR_7g115120 | 57.600 | 125 | 42 | 3 | 140 | 259 | 167 | 285 | 2.40e-25 | 105 |
| MS.gene059104.t1 | MTR_7g115140 | 40.000 | 125 | 69 | 2 | 119 | 243 | 88 | 206 | 6.55e-19 | 84.3 |
| MS.gene059104.t1 | MTR_3g117120 | 41.558 | 77 | 45 | 0 | 168 | 244 | 27 | 103 | 1.11e-11 | 62.8 |
| MS.gene059104.t1 | MTR_1g022495 | 33.898 | 118 | 77 | 1 | 143 | 260 | 3 | 119 | 1.25e-11 | 62.8 |
| MS.gene059104.t1 | MTR_7g029400 | 37.984 | 129 | 70 | 3 | 115 | 243 | 38 | 156 | 2.26e-11 | 62.8 |
| MS.gene059104.t1 | MTR_8g086020 | 35.294 | 85 | 55 | 0 | 166 | 250 | 30 | 114 | 4.11e-11 | 61.2 |
| MS.gene059104.t1 | MTR_8g015250 | 43.478 | 92 | 47 | 1 | 152 | 243 | 60 | 146 | 5.70e-11 | 61.2 |
| MS.gene059104.t1 | MTR_6g016375 | 40.385 | 104 | 56 | 3 | 156 | 258 | 77 | 175 | 6.28e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059104.t1 | AT5G24800 | 50.638 | 235 | 88 | 6 | 112 | 338 | 62 | 276 | 1.29e-60 | 196 |
| MS.gene059104.t1 | AT5G28770 | 58.333 | 108 | 43 | 1 | 155 | 260 | 130 | 237 | 2.20e-24 | 101 |
| MS.gene059104.t1 | AT5G28770 | 58.333 | 108 | 43 | 1 | 155 | 260 | 137 | 244 | 2.52e-24 | 101 |
| MS.gene059104.t1 | AT5G28770 | 61.111 | 90 | 35 | 0 | 155 | 244 | 137 | 226 | 2.09e-20 | 89.4 |
| MS.gene059104.t1 | AT4G02640 | 43.333 | 150 | 79 | 2 | 111 | 254 | 157 | 306 | 6.55e-16 | 78.6 |
| MS.gene059104.t1 | AT4G02640 | 43.333 | 150 | 79 | 2 | 111 | 254 | 157 | 306 | 6.66e-16 | 78.6 |
| MS.gene059104.t1 | AT4G02640 | 53.097 | 113 | 51 | 1 | 144 | 254 | 188 | 300 | 1.26e-15 | 77.8 |
| MS.gene059104.t1 | AT4G02640 | 46.970 | 132 | 68 | 1 | 125 | 254 | 169 | 300 | 1.50e-15 | 77.4 |
| MS.gene059104.t1 | AT3G54620 | 51.136 | 88 | 43 | 0 | 167 | 254 | 227 | 314 | 4.11e-13 | 70.1 |
| MS.gene059104.t1 | AT1G75390 | 39.759 | 83 | 50 | 0 | 168 | 250 | 38 | 120 | 7.08e-12 | 63.5 |
| MS.gene059104.t1 | AT2G18160 | 36.190 | 105 | 57 | 1 | 146 | 250 | 16 | 110 | 1.41e-11 | 62.8 |
| MS.gene059104.t1 | AT3G30530 | 39.773 | 88 | 53 | 0 | 156 | 243 | 66 | 153 | 6.17e-11 | 60.8 |
Find 77 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCTTGGGAGTGAGGTTT+TGG | 0.180329 | 1.2:-10996381 | None:intergenic |
| GAGTCTCAATCATCCATTTC+TGG | 0.205767 | 1.2:+10996424 | MS.gene059104:CDS |
| TGTTCAATTGACTCTGATTT+TGG | 0.206784 | 1.2:-10998847 | None:intergenic |
| GGCAGAATGGTGCTCCATTT+TGG | 0.285783 | 1.2:-10993657 | None:intergenic |
| GTCATCGAAGCTGGAGAATA+TGG | 0.297219 | 1.2:-10993688 | None:intergenic |
| CATCTGTAAGCTGCTTAAAT+AGG | 0.310185 | 1.2:-10998371 | None:intergenic |
| TTTGGCAGACCTTGAGGTTC+AGG | 0.310946 | 1.2:+10998187 | MS.gene059104:CDS |
| CCTGCGAAATGGAACCAAAA+TGG | 0.330729 | 1.2:+10993643 | None:intergenic |
| CTAAGACGCTTCATATCAAC+AGG | 0.337570 | 1.2:-10997401 | None:intergenic |
| TGCAGTGATGGTGGAGTTCT+TGG | 0.341951 | 1.2:-10996395 | None:intergenic |
| TGAGCTCTTTGACTAGCTTA+TGG | 0.345147 | 1.2:+10999050 | MS.gene059104:CDS |
| AAGAAGAAAACAAGCACATT+TGG | 0.358483 | 1.2:+10998169 | MS.gene059104:CDS |
| TGTTGTTGTAGTCACTCCTT+TGG | 0.367802 | 1.2:-10997312 | None:intergenic |
| GGTGAAGTTAGCAGAGGATA+TGG | 0.388906 | 1.2:+10998784 | MS.gene059104:intron |
| CAGAATTCAGCTATTGGACT+TGG | 0.407633 | 1.2:+10998971 | MS.gene059104:CDS |
| AGTGGACAGAATTCAGCTAT+TGG | 0.421178 | 1.2:+10998965 | MS.gene059104:CDS |
| ATTGCTGTTTCGACGGTAAC+GGG | 0.421215 | 1.2:-10993759 | None:intergenic |
| CCAGCTTCGATGACCTCAAA+TGG | 0.421645 | 1.2:+10993697 | MS.gene059104:CDS |
| CTGGAGAATATGGAGGTTGC+TGG | 0.422279 | 1.2:-10993678 | None:intergenic |
| AGTATTACCGGTGCCAGAAA+TGG | 0.427107 | 1.2:-10996437 | None:intergenic |
| CAAACAAGAGTATTATTTGT+TGG | 0.433570 | 1.2:-10996355 | None:intergenic |
| CACTAGTAATCTCCGTTGTA+TGG | 0.434010 | 1.2:+10998889 | MS.gene059104:CDS |
| TGTTAGCATCGCGAAATTGT+TGG | 0.440152 | 1.2:-10998398 | None:intergenic |
| TTGATATGAAGCGTCTTAGA+AGG | 0.440492 | 1.2:+10997405 | MS.gene059104:CDS |
| CCATTTGAGGTCATCGAAGC+TGG | 0.443299 | 1.2:-10993697 | None:intergenic |
| TTAGGTTGAACAGCTGAGGC+TGG | 0.444559 | 1.2:+10998338 | MS.gene059104:intron |
| GGCGCTTCATATGGTGTTAG+TGG | 0.450778 | 1.2:+10998947 | MS.gene059104:CDS |
| CATGGAAACGGCGCTTCATA+TGG | 0.453435 | 1.2:+10998938 | MS.gene059104:CDS |
| ACATCGCCGACACCGATGAA+TGG | 0.462932 | 1.2:-10993816 | None:intergenic |
| TTTCCATGGACGGTGATTGT+AGG | 0.469678 | 1.2:-10998923 | None:intergenic |
| ATTCTGCTGTGATCCATTTG+AGG | 0.470171 | 1.2:-10993710 | None:intergenic |
| GATTGCTGTTTCGACGGTAA+CGG | 0.481529 | 1.2:-10993760 | None:intergenic |
| AGCAGAGGATATGGTCTCTA+GGG | 0.483549 | 1.2:+10998793 | MS.gene059104:CDS |
| GCAGTGATGGTGGAGTTCTT+GGG | 0.488823 | 1.2:-10996394 | None:intergenic |
| TGGTGGAGTTCTTGGGAGTG+AGG | 0.489497 | 1.2:-10996387 | None:intergenic |
| AGATTACTAGTGTTGATTTG+TGG | 0.491316 | 1.2:-10998878 | None:intergenic |
| ACTGACCAGATTATGAAAAT+CGG | 0.504341 | 1.2:-10993865 | None:intergenic |
| CATATGAAGCGCCGTTTCCA+TGG | 0.507132 | 1.2:-10998937 | None:intergenic |
| TAGCAGAGGATATGGTCTCT+AGG | 0.512033 | 1.2:+10998792 | MS.gene059104:CDS |
| CGATGTAAAACCGTGTAAGA+TGG | 0.513999 | 1.2:+10993791 | MS.gene059104:CDS |
| AGAAGCTGGTTGTTAAAAGT+AGG | 0.514450 | 1.2:-10998824 | None:intergenic |
| CAATCATCCATTTCTGGCAC+CGG | 0.522644 | 1.2:+10996430 | MS.gene059104:CDS |
| ACAATCACCGTCCATGGAAA+CGG | 0.523083 | 1.2:+10998926 | MS.gene059104:CDS |
| TGCAGTCATGATTTCAACAA+TGG | 0.523773 | 1.2:+10999010 | MS.gene059104:CDS |
| TGTTGAAGCTTTAAGAGCTA+AGG | 0.529338 | 1.2:+10998446 | MS.gene059104:CDS |
| AGCTCTTAAAGCTTCAACAT+CGG | 0.530694 | 1.2:-10998442 | None:intergenic |
| GCTTCATCATCTTCATCAGA+TGG | 0.530813 | 1.2:-10997353 | None:intergenic |
| CTCAATAGTTGCAGTGATGG+TGG | 0.531409 | 1.2:-10996404 | None:intergenic |
| ACATGTTGAAAATGAAGTTA+CGG | 0.531605 | 1.2:-10996326 | None:intergenic |
| TTTCTTAGGTTGAACAGCTG+AGG | 0.532387 | 1.2:+10998334 | MS.gene059104:intron |
| TCGCCTACAATCACCGTCCA+TGG | 0.536280 | 1.2:+10998920 | MS.gene059104:CDS |
| CTTGGTTTATTAGCTGACAC+TGG | 0.537426 | 1.2:-10997272 | None:intergenic |
| AGCATCGCGAAATTGTTGGC+TGG | 0.553901 | 1.2:-10998394 | None:intergenic |
| GTCGTCGATTGCTGTTTCGA+CGG | 0.555171 | 1.2:-10993766 | None:intergenic |
| AGTAGAGAAAATCAAACCAA+AGG | 0.561027 | 1.2:+10997296 | MS.gene059104:CDS |
| GGTGTCGGCGATGTTTGCTC+TGG | 0.562967 | 1.2:+10993825 | MS.gene059104:CDS |
| AGCACATTTGGCAGACCTTG+AGG | 0.572432 | 1.2:+10998181 | MS.gene059104:CDS |
| TGAAGCGCCGTTTCCATGGA+CGG | 0.583505 | 1.2:-10998933 | None:intergenic |
| TCTGATGAAGATGATGAAGC+AGG | 0.584800 | 1.2:+10997356 | MS.gene059104:CDS |
| GGGTTTGTACTTTGTTCACA+AGG | 0.595616 | 1.2:-10997380 | None:intergenic |
| AATTAATTACCTGAACCTCA+AGG | 0.595756 | 1.2:-10998196 | None:intergenic |
| ATGGATCCATTCATCGGTGT+CGG | 0.602190 | 1.2:+10993810 | MS.gene059104:CDS |
| AGACTCAATAGTTGCAGTGA+TGG | 0.603647 | 1.2:-10996407 | None:intergenic |
| TATGGAGGTTGCTGGCAGAA+TGG | 0.618667 | 1.2:-10993670 | None:intergenic |
| GGAGTGACTACAACAACAAG+TGG | 0.619797 | 1.2:+10997317 | MS.gene059104:CDS |
| TTACTAGTGTTGATTTGTGG+CGG | 0.621086 | 1.2:-10998875 | None:intergenic |
| TGTAAGATGGATCCATTCAT+CGG | 0.623168 | 1.2:+10993804 | MS.gene059104:CDS |
| GCGAAACATGCGCCATACAA+CGG | 0.641264 | 1.2:-10998901 | None:intergenic |
| AATTTAGGTGAAGTTAGCAG+AGG | 0.643088 | 1.2:+10998778 | MS.gene059104:intron |
| ATGAATGGATCCATCTTACA+CGG | 0.644634 | 1.2:-10993801 | None:intergenic |
| TTCATCAGATGGATCACGTG+AGG | 0.658342 | 1.2:-10997342 | None:intergenic |
| GACCAGATTATGAAAATCGG+CGG | 0.666849 | 1.2:-10993862 | None:intergenic |
| CTAATCGCGAGTCTGCCAGA+AGG | 0.671078 | 1.2:+10998141 | MS.gene059104:CDS |
| AGTGTTGATTTGTGGCGGAG+TGG | 0.681459 | 1.2:-10998870 | None:intergenic |
| GCAGAGGATATGGTCTCTAG+GGG | 0.691454 | 1.2:+10998794 | MS.gene059104:CDS |
| ATCGAAGCTGGAGAATATGG+AGG | 0.698276 | 1.2:-10993685 | None:intergenic |
| TAAGACGCTTCATATCAACA+GGG | 0.724365 | 1.2:-10997400 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAAATCACATTTAA+AGG | - | chr1.2:10997961-10997980 | None:intergenic | 10.0% |
| !! | AGATTAATTTATTTGAATAA+AGG | + | chr1.2:10995314-10995333 | MS.gene059104:intron | 10.0% |
| !! | ATATAATAGTAAATATAAAG+TGG | + | chr1.2:10996747-10996766 | MS.gene059104:intron | 10.0% |
| !! | CAAAATAAATAAATATAAAG+TGG | + | chr1.2:10996798-10996817 | MS.gene059104:intron | 10.0% |
| !! | GATTAATTTATTTGAATAAA+GGG | + | chr1.2:10995315-10995334 | MS.gene059104:intron | 10.0% |
| !! | TAAAAAAAAATGAATAGAAA+AGG | + | chr1.2:10995636-10995655 | MS.gene059104:intron | 10.0% |
| !! | TTATGACAAAATAATAAATA+CGG | + | chr1.2:10994379-10994398 | MS.gene059104:intron | 10.0% |
| !!! | AAACTAAATTTTACATTTTA+AGG | - | chr1.2:10994148-10994167 | None:intergenic | 10.0% |
| !!! | AGAAATCATATTATTTTTTT+GGG | + | chr1.2:10997634-10997653 | MS.gene059104:intron | 10.0% |
| !!! | CACTTTATATTTATTTATTT+TGG | - | chr1.2:10996800-10996819 | None:intergenic | 10.0% |
| !!! | CATAATTTTAACATTTTAAT+TGG | - | chr1.2:10996645-10996664 | None:intergenic | 10.0% |
| !!! | GTTTTTAATTGAATTAATTT+TGG | - | chr1.2:10998067-10998086 | None:intergenic | 10.0% |
| !!! | TTTATTATATTTTGTTTCTT+AGG | + | chr1.2:10998320-10998339 | MS.gene059104:intron | 10.0% |
| !!! | TTTTTTTTTTTTGTTACAAA+AGG | - | chr1.2:10998248-10998267 | None:intergenic | 10.0% |
| !! | AATTTATAGTAAGATGAATT+AGG | + | chr1.2:10995468-10995487 | MS.gene059104:intron | 15.0% |
| !! | ATAGAATACATCAATTATAA+AGG | - | chr1.2:10994276-10994295 | None:intergenic | 15.0% |
| !! | ATATAATAAAATTCTCATAG+TGG | - | chr1.2:10998310-10998329 | None:intergenic | 15.0% |
| !! | TAAGTAATCTTATCTTATAT+TGG | - | chr1.2:10997059-10997078 | None:intergenic | 15.0% |
| !! | TCTTATAATATATAAACTCA+TGG | - | chr1.2:10997615-10997634 | None:intergenic | 15.0% |
| !! | TTAAAAAGAAACAATTCATT+AGG | - | chr1.2:10995970-10995989 | None:intergenic | 15.0% |
| !!! | AAATCATATTATTTTTTTGG+GGG | + | chr1.2:10997636-10997655 | MS.gene059104:intron | 15.0% |
| !!! | ACATGAACTTTTTTTTTTTT+TGG | - | chr1.2:10995015-10995034 | None:intergenic | 15.0% |
| !!! | ATTTTATAAATTCTCAATGT+TGG | + | chr1.2:10997469-10997488 | MS.gene059104:intron | 15.0% |
| !!! | ATTTTTTTTGTCTTTTACTT+TGG | + | chr1.2:10994849-10994868 | MS.gene059104:intron | 15.0% |
| !!! | GAAATCATATTATTTTTTTG+GGG | + | chr1.2:10997635-10997654 | MS.gene059104:intron | 15.0% |
| !!! | GAGAAATCATATTATTTTTT+TGG | + | chr1.2:10997633-10997652 | MS.gene059104:intron | 15.0% |
| !!! | TTAGATACTTTTATTTCAAA+AGG | + | chr1.2:10995125-10995144 | MS.gene059104:intron | 15.0% |
| !!! | TTTTCTATGTTGTTTTATTT+GGG | + | chr1.2:10995889-10995908 | MS.gene059104:intron | 15.0% |
| !!! | TTTTTTTTGTCTTTTACTTT+GGG | + | chr1.2:10994850-10994869 | MS.gene059104:intron | 15.0% |
| !! | AAATCATCATTTATTATTGC+TGG | + | chr1.2:10994019-10994038 | MS.gene059104:intron | 20.0% |
| !! | AATATAATAGAAAAGAAGAG+AGG | - | chr1.2:10995549-10995568 | None:intergenic | 20.0% |
| !! | AATTTATTTGAATAAAGGGA+TGG | + | chr1.2:10995319-10995338 | MS.gene059104:intron | 20.0% |
| !! | ACAATGAAGTTATCTATAAA+GGG | - | chr1.2:10997132-10997151 | None:intergenic | 20.0% |
| !! | ACATGGATTTCTTAAATTTA+TGG | - | chr1.2:10996862-10996881 | None:intergenic | 20.0% |
| !! | AGAGAAATTATAATCTAACA+AGG | + | chr1.2:10997661-10997680 | MS.gene059104:intron | 20.0% |
| !! | ATATAATAGAAAAGAAGAGA+GGG | - | chr1.2:10995548-10995567 | None:intergenic | 20.0% |
| !! | ATGGAATTTGGTATATTTAA+AGG | + | chr1.2:10994619-10994638 | MS.gene059104:intron | 20.0% |
| !! | ATTAACCAAACAACAAAAAT+AGG | - | chr1.2:10995353-10995372 | None:intergenic | 20.0% |
| !! | TAAATATAAAGTGGAGTTTA+GGG | + | chr1.2:10996756-10996775 | MS.gene059104:intron | 20.0% |
| !! | TACAATGAAGTTATCTATAA+AGG | - | chr1.2:10997133-10997152 | None:intergenic | 20.0% |
| !! | TCTACATATGAAAATTTGAT+AGG | + | chr1.2:10996044-10996063 | MS.gene059104:intron | 20.0% |
| !! | TCTATCTTAATTCTTTGATT+TGG | - | chr1.2:10994573-10994592 | None:intergenic | 20.0% |
| !! | TGGAATTTGGTATATTTAAA+GGG | + | chr1.2:10994620-10994639 | MS.gene059104:intron | 20.0% |
| !! | TTAACCAAACAACAAAAATA+GGG | - | chr1.2:10995352-10995371 | None:intergenic | 20.0% |
| !! | TTCAAAAAAATTCTCAATGT+TGG | + | chr1.2:10997496-10997515 | MS.gene059104:intron | 20.0% |
| !!! | AAATTGATTTTGGTATGTTT+TGG | + | chr1.2:10997858-10997877 | MS.gene059104:intron | 20.0% |
| !!! | AAGAATTTTATGTCCAATTT+AGG | + | chr1.2:10998763-10998782 | MS.gene059104:intron | 20.0% |
| !!! | AGAAATATGTTTCTTTTCTT+TGG | + | chr1.2:10996554-10996573 | MS.gene059104:intron | 20.0% |
| !!! | AGAGTTTTTTTTTATGTGAA+TGG | + | chr1.2:10994600-10994619 | MS.gene059104:intron | 20.0% |
| !!! | ATATATCATAGAGCTTATTT+TGG | + | chr1.2:10997220-10997239 | MS.gene059104:intron | 20.0% |
| !!! | ATTAAAGAAGAACTTTTACT+AGG | + | chr1.2:10997549-10997568 | MS.gene059104:intron | 20.0% |
| !!! | ATTATAAAGGTTGATTTGAT+TGG | - | chr1.2:10994263-10994282 | None:intergenic | 20.0% |
| !!! | ATTTATATATACCTTTTGCT+TGG | + | chr1.2:10995931-10995950 | MS.gene059104:intron | 20.0% |
| !!! | ATTTATTTTGGTACAAAAGA+GGG | - | chr1.2:10996788-10996807 | None:intergenic | 20.0% |
| !!! | CTTTTCTATGTTGTTTTATT+TGG | + | chr1.2:10995888-10995907 | MS.gene059104:intron | 20.0% |
| !!! | GTATCACTACAATTTTAATT+TGG | - | chr1.2:10994471-10994490 | None:intergenic | 20.0% |
| !!! | TACATTTTAAGGTGAATAAT+CGG | - | chr1.2:10994137-10994156 | None:intergenic | 20.0% |
| !!! | TATATAACATAGAGTATTAC+CGG | - | chr1.2:10996452-10996471 | None:intergenic | 20.0% |
| !!! | TATATTTACTTTTCATGAAG+TGG | + | chr1.2:10995776-10995795 | MS.gene059104:intron | 20.0% |
| !!! | TATTTATTTTGGTACAAAAG+AGG | - | chr1.2:10996789-10996808 | None:intergenic | 20.0% |
| !!! | TCAATAATTCATGTTTGTTT+TGG | - | chr1.2:10994506-10994525 | None:intergenic | 20.0% |
| !!! | TGAACTTTTTTTTTTTTTGG+TGG | - | chr1.2:10995012-10995031 | None:intergenic | 20.0% |
| !!! | TGAAGACTTAAAATTGATTT+TGG | + | chr1.2:10997848-10997867 | MS.gene059104:intron | 20.0% |
| !!! | TGCATATTTGAATTTACTTT+TGG | + | chr1.2:10997807-10997826 | MS.gene059104:intron | 20.0% |
| !!! | TTTGCCAAAAATATTTTGTT+GGG | + | chr1.2:10998695-10998714 | MS.gene059104:intron | 20.0% |
| !!! | TTTTGCCAAAAATATTTTGT+TGG | + | chr1.2:10998694-10998713 | MS.gene059104:intron | 20.0% |
| !!! | TTTTGGATTGAATTGTATAA+TGG | + | chr1.2:10997237-10997256 | MS.gene059104:intron | 20.0% |
| !!! | TTTTTAATAGTGTTTGATTG+AGG | - | chr1.2:10995573-10995592 | None:intergenic | 20.0% |
| !!! | TTTTTTATGTGAATGGAATT+TGG | + | chr1.2:10994607-10994626 | MS.gene059104:intron | 20.0% |
| ! | AAAAATGTTGTGTGACATAT+CGG | + | chr1.2:10998573-10998592 | MS.gene059104:intron | 25.0% |
| ! | AATAAAGACGTGTAAATGAA+AGG | + | chr1.2:10995993-10996012 | MS.gene059104:intron | 25.0% |
| ! | AATATAATAGAGCAACAACA+TGG | + | chr1.2:10995659-10995678 | MS.gene059104:intron | 25.0% |
| ! | ACATGTTGAAAATGAAGTTA+CGG | - | chr1.2:10996329-10996348 | None:intergenic | 25.0% |
| ! | ATAAAGTGGAGTCTTAAAAT+AGG | + | chr1.2:10996812-10996831 | MS.gene059104:intron | 25.0% |
| ! | ATAACTAGTGATTTCAAAGA+TGG | - | chr1.2:10998274-10998293 | None:intergenic | 25.0% |
| ! | ATATAATAGAGCAACAACAT+GGG | + | chr1.2:10995660-10995679 | MS.gene059104:intron | 25.0% |
| ! | CAATAATTCTATTACTAGCT+AGG | - | chr1.2:10995803-10995822 | None:intergenic | 25.0% |
| ! | GAAATTATAATCTAACAAGG+TGG | + | chr1.2:10997664-10997683 | MS.gene059104:intron | 25.0% |
| ! | GACAAATTGAAAAGGAATAT+AGG | + | chr1.2:10995613-10995632 | MS.gene059104:intron | 25.0% |
| ! | GTAAATATAAAGTGGAGTTT+AGG | + | chr1.2:10996755-10996774 | MS.gene059104:intron | 25.0% |
| ! | TAATATATAAACTCATGGTC+TGG | - | chr1.2:10997610-10997629 | None:intergenic | 25.0% |
| ! | TAGAAAAGCTAAGCTATAAA+AGG | - | chr1.2:10995876-10995895 | None:intergenic | 25.0% |
| ! | TCATTTATTATTGCTGGTAA+TGG | + | chr1.2:10994025-10994044 | MS.gene059104:intron | 25.0% |
| ! | TTACAAGTGACAAATTGAAA+AGG | + | chr1.2:10995605-10995624 | MS.gene059104:intron | 25.0% |
| ! | TTACGATTAGATTGCAAAAA+CGG | + | chr1.2:10998503-10998522 | MS.gene059104:intron | 25.0% |
| ! | TTTGCTAGCAAAATTTATAC+TGG | - | chr1.2:10996495-10996514 | None:intergenic | 25.0% |
| !! | AAAATTCTCATAGTGGAAAT+TGG | - | chr1.2:10998303-10998322 | None:intergenic | 25.0% |
| !! | CATATTTGTTAAGAGTCTAT+TGG | - | chr1.2:10995748-10995767 | None:intergenic | 25.0% |
| !! | GACTAATACAAGGTTTTTAT+TGG | + | chr1.2:10995150-10995169 | MS.gene059104:intron | 25.0% |
| !! | GCTATAATTCATTCTTTTCT+TGG | - | chr1.2:10995522-10995541 | None:intergenic | 25.0% |
| !! | GGACATAATTTTCTTATAGA+AGG | - | chr1.2:10995698-10995717 | None:intergenic | 25.0% |
| !! | GGATTTATCTAGTTCAAAAT+AGG | - | chr1.2:10997589-10997608 | None:intergenic | 25.0% |
| !! | GGGATTTTTACTATAATTGT+AGG | + | chr1.2:10996902-10996921 | MS.gene059104:intron | 25.0% |
| !! | TATCCCCAACAAAATATTTT+TGG | - | chr1.2:10998702-10998721 | None:intergenic | 25.0% |
| !! | TTACATGAATTTGATGATCT+TGG | - | chr1.2:10998654-10998673 | None:intergenic | 25.0% |
| !! | TTAGAGTAATGTTATTTGTC+TGG | - | chr1.2:10996253-10996272 | None:intergenic | 25.0% |
| !! | TTGCCAAAAATATTTTGTTG+GGG | + | chr1.2:10998696-10998715 | MS.gene059104:intron | 25.0% |
| !!! | ACATTTTAAGGTGAATAATC+GGG | - | chr1.2:10994136-10994155 | None:intergenic | 25.0% |
| !!! | ATGATTTGTTACCTTCTTTA+AGG | - | chr1.2:10996024-10996043 | None:intergenic | 25.0% |
| !!! | ATTAGAGATATTCAAGTTGT+TGG | + | chr1.2:10994333-10994352 | MS.gene059104:intron | 25.0% |
| !!! | CAAACAAGAGTATTATTTGT+TGG | - | chr1.2:10996358-10996377 | None:intergenic | 25.0% |
| !!! | CTTTTCTTGGTTAGTTTTTT+AGG | - | chr1.2:10995509-10995528 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTTTTTTGGTGGT+CGG | - | chr1.2:10995008-10995027 | None:intergenic | 25.0% |
| !!! | GAATTCTTGATTTGTAATCA+CGG | - | chr1.2:10998610-10998629 | None:intergenic | 25.0% |
| !!! | TGTTTGTTTTGGTAGAATTA+CGG | - | chr1.2:10994495-10994514 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTCCTGAAGTAAT+AGG | - | chr1.2:10996087-10996106 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTGGTGGTC+GGG | - | chr1.2:10995007-10995026 | None:intergenic | 25.0% |
| AAGAAGAAAACAAGCACATT+TGG | + | chr1.2:10998169-10998188 | MS.gene059104:CDS | 30.0% | |
| AATCCATGTAATCATGAAGT+TGG | + | chr1.2:10996873-10996892 | MS.gene059104:intron | 30.0% | |
| AATTAATCTTTCGCTTCCTT+CGG | - | chr1.2:10995303-10995322 | None:intergenic | 30.0% | |
| AATTAATTACCTGAACCTCA+AGG | - | chr1.2:10998199-10998218 | None:intergenic | 30.0% | |
| ACTAATTGACAACCAAACTT+TGG | + | chr1.2:10995264-10995283 | MS.gene059104:intron | 30.0% | |
| ACTGACCAGATTATGAAAAT+CGG | - | chr1.2:10993868-10993887 | None:intergenic | 30.0% | |
| AGAAAATTATGTCCAATGCA+TGG | + | chr1.2:10995704-10995723 | MS.gene059104:intron | 30.0% | |
| AGTAGAGAAAATCAAACCAA+AGG | + | chr1.2:10997296-10997315 | MS.gene059104:CDS | 30.0% | |
| AGTCAAACATTAAACATGCA+TGG | + | chr1.2:10995094-10995113 | MS.gene059104:intron | 30.0% | |
| AGTTAACAACCTATTACTTC+AGG | + | chr1.2:10996075-10996094 | MS.gene059104:intron | 30.0% | |
| ATATTTAAAGGGTGAAGCAA+AGG | + | chr1.2:10994631-10994650 | MS.gene059104:intron | 30.0% | |
| CAAACTATATAACTTCAAGC+TGG | - | chr1.2:10997929-10997948 | None:intergenic | 30.0% | |
| CAATCTAATCGTAATACACA+TGG | - | chr1.2:10998497-10998516 | None:intergenic | 30.0% | |
| CATGTGATATTGAAGAAACT+TGG | - | chr1.2:10995440-10995459 | None:intergenic | 30.0% | |
| GAAAGGAATATCCTTAAAGA+AGG | + | chr1.2:10996010-10996029 | MS.gene059104:intron | 30.0% | |
| TAATACAACCGTAGTTAGTA+GGG | - | chr1.2:10993970-10993989 | None:intergenic | 30.0% | |
| TACACTCTTAATGTGATTTC+AGG | + | chr1.2:10998111-10998130 | MS.gene059104:intron | 30.0% | |
| TATAGCGAATAACCATTGTA+TGG | - | chr1.2:10995184-10995203 | None:intergenic | 30.0% | |
| TATCAAAGTAGAAACTCCAA+AGG | - | chr1.2:10994056-10994075 | None:intergenic | 30.0% | |
| TCAAAAGGAAGACTAATACA+AGG | + | chr1.2:10995140-10995159 | MS.gene059104:intron | 30.0% | |
| TCACATAGCTAGAATTTGAT+TGG | + | chr1.2:10996180-10996199 | MS.gene059104:intron | 30.0% | |
| TGCATAATATATGCAAAGTC+CGG | + | chr1.2:10994972-10994991 | MS.gene059104:intron | 30.0% | |
| TGTAATTATGACTGTTGCAT+TGG | - | chr1.2:10997087-10997106 | None:intergenic | 30.0% | |
| TTAATACAACCGTAGTTAGT+AGG | - | chr1.2:10993971-10993990 | None:intergenic | 30.0% | |
| ! | ACTTTGTTTAGTGATGAAGA+AGG | + | chr1.2:10994680-10994699 | MS.gene059104:intron | 30.0% |
| ! | ATTTTCTTATAGAAGGCCAA+AGG | - | chr1.2:10995691-10995710 | None:intergenic | 30.0% |
| ! | CAGTGTACTTTTACTACTTT+AGG | - | chr1.2:10997753-10997772 | None:intergenic | 30.0% |
| ! | CTTTTTGTGTTATGATGCAA+TGG | + | chr1.2:10996987-10997006 | MS.gene059104:intron | 30.0% |
| ! | GTAACTTCATTTTCAACATG+TGG | + | chr1.2:10996328-10996347 | MS.gene059104:CDS | 30.0% |
| !! | AGATTACTAGTGTTGATTTG+TGG | - | chr1.2:10998881-10998900 | None:intergenic | 30.0% |
| !! | TGTTCAATTGACTCTGATTT+TGG | - | chr1.2:10998850-10998869 | None:intergenic | 30.0% |
| !!! | AGTTTTTTAGGAGAAGCATA+GGG | - | chr1.2:10995497-10995516 | None:intergenic | 30.0% |
| !!! | GAAACCCTATTTTTGTTGTT+TGG | + | chr1.2:10995345-10995364 | MS.gene059104:intron | 30.0% |
| !!! | TAGTTTTTTAGGAGAAGCAT+AGG | - | chr1.2:10995498-10995517 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTTGGTGGTCG+GGG | - | chr1.2:10995006-10995025 | None:intergenic | 30.0% |
| AAACGTTTCCCTACTAACTA+CGG | + | chr1.2:10993959-10993978 | MS.gene059104:intron | 35.0% | |
| AAGGGCTGAATTAAGAACAA+TGG | - | chr1.2:10996291-10996310 | None:intergenic | 35.0% | |
| AAGTTCTATCACAAAACCAC+AGG | - | chr1.2:10994543-10994562 | None:intergenic | 35.0% | |
| AATCATGAAGTTGGCAAGTT+GGG | + | chr1.2:10996882-10996901 | MS.gene059104:intron | 35.0% | |
| AATTATGACTGTTGCATTGG+TGG | - | chr1.2:10997084-10997103 | None:intergenic | 35.0% | |
| AATTTAGGTGAAGTTAGCAG+AGG | + | chr1.2:10998778-10998797 | MS.gene059104:intron | 35.0% | |
| ACATGGAAGAACTTGTAAAG+TGG | - | chr1.2:10998480-10998499 | None:intergenic | 35.0% | |
| ACCTAATAGATACCATGCAT+TGG | - | chr1.2:10995719-10995738 | None:intergenic | 35.0% | |
| ACTGAAACATGAACATCTAG+AGG | - | chr1.2:10994920-10994939 | None:intergenic | 35.0% | |
| AGAAGCTGGTTGTTAAAAGT+AGG | - | chr1.2:10998827-10998846 | None:intergenic | 35.0% | |
| AGCTCTTAAAGCTTCAACAT+CGG | - | chr1.2:10998445-10998464 | None:intergenic | 35.0% | |
| ATCATACATGTGATCGTATG+TGG | - | chr1.2:10996161-10996180 | None:intergenic | 35.0% | |
| ATGAATGGATCCATCTTACA+CGG | - | chr1.2:10993804-10993823 | None:intergenic | 35.0% | |
| ATTATTGCCCACAATCTTAG+TGG | + | chr1.2:10995816-10995835 | MS.gene059104:intron | 35.0% | |
| CATAATATATGCAAAGTCCG+GGG | + | chr1.2:10994974-10994993 | MS.gene059104:intron | 35.0% | |
| CATCTGTAAGCTGCTTAAAT+AGG | - | chr1.2:10998374-10998393 | None:intergenic | 35.0% | |
| CATGTACATGATGACAATAG+AGG | + | chr1.2:10997723-10997742 | MS.gene059104:intron | 35.0% | |
| CCATAAATTCTCTCTGCATA+AGG | + | chr1.2:10995053-10995072 | MS.gene059104:intron | 35.0% | |
| CCTTATGCAGAGAGAATTTA+TGG | - | chr1.2:10995056-10995075 | None:intergenic | 35.0% | |
| CGAATAACCATTGTATGGTT+TGG | - | chr1.2:10995179-10995198 | None:intergenic | 35.0% | |
| CTATTGTCATCATGTACATG+TGG | - | chr1.2:10997723-10997742 | None:intergenic | 35.0% | |
| CTCTTAATGTGATTTCAGGA+AGG | + | chr1.2:10998115-10998134 | MS.gene059104:intron | 35.0% | |
| GATATTGAAGAAACTTGGAG+AGG | - | chr1.2:10995435-10995454 | None:intergenic | 35.0% | |
| GCATAAGGTGATTATTTACG+AGG | + | chr1.2:10995068-10995087 | MS.gene059104:intron | 35.0% | |
| GCATAATATATGCAAAGTCC+GGG | + | chr1.2:10994973-10994992 | MS.gene059104:intron | 35.0% | |
| GTGTTCAACTTTCACGTTAA+CGG | + | chr1.2:10997988-10998007 | MS.gene059104:intron | 35.0% | |
| TAAGACGCTTCATATCAACA+GGG | - | chr1.2:10997403-10997422 | None:intergenic | 35.0% | |
| TAATCATGAAGTTGGCAAGT+TGG | + | chr1.2:10996881-10996900 | MS.gene059104:intron | 35.0% | |
| TCCAATGCATGGTATCTATT+AGG | + | chr1.2:10995715-10995734 | MS.gene059104:intron | 35.0% | |
| TCTGCTAACTTCACCTAAAT+TGG | - | chr1.2:10998779-10998798 | None:intergenic | 35.0% | |
| TGCAGTCATGATTTCAACAA+TGG | + | chr1.2:10999010-10999029 | MS.gene059104:CDS | 35.0% | |
| TGTAAGATGGATCCATTCAT+CGG | + | chr1.2:10993804-10993823 | MS.gene059104:CDS | 35.0% | |
| TGTGTTATGATGCAATGGTT+GGG | + | chr1.2:10996992-10997011 | MS.gene059104:intron | 35.0% | |
| TTATTGCCCACAATCTTAGT+GGG | + | chr1.2:10995817-10995836 | MS.gene059104:intron | 35.0% | |
| TTGCCAACTTCATGATTACA+TGG | - | chr1.2:10996879-10996898 | None:intergenic | 35.0% | |
| TTGTGTTATGATGCAATGGT+TGG | + | chr1.2:10996991-10997010 | MS.gene059104:intron | 35.0% | |
| TTTGTAATCACGGTATGTGT+TGG | - | chr1.2:10998600-10998619 | None:intergenic | 35.0% | |
| ! | ATTATGACTGTTGCATTGGT+GGG | - | chr1.2:10997083-10997102 | None:intergenic | 35.0% |
| ! | GTTTTTGCTTTCCAAGCAAA+AGG | - | chr1.2:10995945-10995964 | None:intergenic | 35.0% |
| ! | TTGATATGAAGCGTCTTAGA+AGG | + | chr1.2:10997405-10997424 | MS.gene059104:CDS | 35.0% |
| ! | TTGATCATGAACTTTTCACG+AGG | + | chr1.2:10993733-10993752 | MS.gene059104:CDS | 35.0% |
| !! | AGAGATATTCAAGTTGTTGG+AGG | + | chr1.2:10994336-10994355 | MS.gene059104:intron | 35.0% |
| !! | ATGTGCTTGTTTTCTTCTTC+TGG | - | chr1.2:10998168-10998187 | None:intergenic | 35.0% |
| !! | GAGATATTCAAGTTGTTGGA+GGG | + | chr1.2:10994337-10994356 | MS.gene059104:intron | 35.0% |
| !! | GTTTGATTTTCTCTACTGCT+TGG | - | chr1.2:10997293-10997312 | None:intergenic | 35.0% |
| !! | TAAAGTGGAGTTTAGGGTTT+TGG | + | chr1.2:10996762-10996781 | MS.gene059104:intron | 35.0% |
| !! | TGTTGAAGCTTTAAGAGCTA+AGG | + | chr1.2:10998446-10998465 | MS.gene059104:CDS | 35.0% |
| !! | TTACTAGTGTTGATTTGTGG+CGG | - | chr1.2:10998878-10998897 | None:intergenic | 35.0% |
| AAGCTTGAAAGTCACGTTAG+AGG | - | chr1.2:10993933-10993952 | None:intergenic | 40.0% | |
| AGACTCAATAGTTGCAGTGA+TGG | - | chr1.2:10996410-10996429 | None:intergenic | 40.0% | |
| AGTGGACAGAATTCAGCTAT+TGG | + | chr1.2:10998965-10998984 | MS.gene059104:CDS | 40.0% | |
| ATTCAGCCCTTCATAATTGC+AGG | + | chr1.2:10996300-10996319 | MS.gene059104:intron | 40.0% | |
| ATTCTGCTGTGATCCATTTG+AGG | - | chr1.2:10993713-10993732 | None:intergenic | 40.0% | |
| CACTAGTAATCTCCGTTGTA+TGG | + | chr1.2:10998889-10998908 | MS.gene059104:CDS | 40.0% | |
| CAGAATTCAGCTATTGGACT+TGG | + | chr1.2:10998971-10998990 | MS.gene059104:CDS | 40.0% | |
| CGATGTAAAACCGTGTAAGA+TGG | + | chr1.2:10993791-10993810 | MS.gene059104:CDS | 40.0% | |
| CGATTAGATTGCAAAAACGG+AGG | + | chr1.2:10998506-10998525 | MS.gene059104:intron | 40.0% | |
| CTAAGACGCTTCATATCAAC+AGG | - | chr1.2:10997404-10997423 | None:intergenic | 40.0% | |
| CTTGGTTTATTAGCTGACAC+TGG | - | chr1.2:10997275-10997294 | None:intergenic | 40.0% | |
| GAAAGCAAACATGAAACCTG+TGG | + | chr1.2:10994524-10994543 | MS.gene059104:intron | 40.0% | |
| GACCAGATTATGAAAATCGG+CGG | - | chr1.2:10993865-10993884 | None:intergenic | 40.0% | |
| GAGTCTCAATCATCCATTTC+TGG | + | chr1.2:10996424-10996443 | MS.gene059104:CDS | 40.0% | |
| GCTTCATCATCTTCATCAGA+TGG | - | chr1.2:10997356-10997375 | None:intergenic | 40.0% | |
| GGGTTTGTACTTTGTTCACA+AGG | - | chr1.2:10997383-10997402 | None:intergenic | 40.0% | |
| GTGTTATGATGCAATGGTTG+GGG | + | chr1.2:10996993-10997012 | MS.gene059104:intron | 40.0% | |
| TCTGATGAAGATGATGAAGC+AGG | + | chr1.2:10997356-10997375 | MS.gene059104:CDS | 40.0% | |
| TGAAGCAAAGGAACTTGTGA+AGG | + | chr1.2:10994643-10994662 | MS.gene059104:intron | 40.0% | |
| TGAGAGACATGTCCAAAGTT+TGG | - | chr1.2:10995279-10995298 | None:intergenic | 40.0% | |
| TGTTAGCATCGCGAAATTGT+TGG | - | chr1.2:10998401-10998420 | None:intergenic | 40.0% | |
| TGTTGTTGTAGTCACTCCTT+TGG | - | chr1.2:10997315-10997334 | None:intergenic | 40.0% | |
| TTGGCTTCCAAACCATACAA+TGG | + | chr1.2:10995169-10995188 | MS.gene059104:intron | 40.0% | |
| ! | ATCATGAACTTTTCACGAGG+CGG | + | chr1.2:10993736-10993755 | MS.gene059104:CDS | 40.0% |
| ! | GTGTTGTCTTTTGAACTCGT+GGG | + | chr1.2:10994787-10994806 | MS.gene059104:intron | 40.0% |
| ! | TGTGTTGTCTTTTGAACTCG+TGG | + | chr1.2:10994786-10994805 | MS.gene059104:intron | 40.0% |
| ! | TTATGACTGTTGCATTGGTG+GGG | - | chr1.2:10997082-10997101 | None:intergenic | 40.0% |
| ! | TTTTCTTCTTCTGGACCTTC+TGG | - | chr1.2:10998159-10998178 | None:intergenic | 40.0% |
| !! | CAACATCGGATTTTAGCACT+CGG | - | chr1.2:10998431-10998450 | None:intergenic | 40.0% |
| !! | TGAGCTCTTTGACTAGCTTA+TGG | + | chr1.2:10999050-10999069 | MS.gene059104:CDS | 40.0% |
| !! | TTTCTTAGGTTGAACAGCTG+AGG | + | chr1.2:10998334-10998353 | MS.gene059104:intron | 40.0% |
| !!! | GCTGGTAATGGTTTTTCCTT+TGG | + | chr1.2:10994037-10994056 | MS.gene059104:intron | 40.0% |
| AACAACATGGGTCGTTCCTT+TGG | + | chr1.2:10995672-10995691 | MS.gene059104:intron | 45.0% | |
| ACAAGGACCCACTAAGATTG+TGG | - | chr1.2:10995827-10995846 | None:intergenic | 45.0% | |
| ACAATCACCGTCCATGGAAA+CGG | + | chr1.2:10998926-10998945 | MS.gene059104:CDS | 45.0% | |
| ACGGCATCCTGCAATTATGA+AGG | - | chr1.2:10996310-10996329 | None:intergenic | 45.0% | |
| AGCAGAGGATATGGTCTCTA+GGG | + | chr1.2:10998793-10998812 | MS.gene059104:CDS | 45.0% | |
| ATCGAAGCTGGAGAATATGG+AGG | - | chr1.2:10993688-10993707 | None:intergenic | 45.0% | |
| ATGGATCCATTCATCGGTGT+CGG | + | chr1.2:10993810-10993829 | MS.gene059104:CDS | 45.0% | |
| CAAGGACCCACTAAGATTGT+GGG | - | chr1.2:10995826-10995845 | None:intergenic | 45.0% | |
| CGGCATCCTGCAATTATGAA+GGG | - | chr1.2:10996309-10996328 | None:intergenic | 45.0% | |
| CTCAATAGTTGCAGTGATGG+TGG | - | chr1.2:10996407-10996426 | None:intergenic | 45.0% | |
| GGAGTGACTACAACAACAAG+TGG | + | chr1.2:10997317-10997336 | MS.gene059104:CDS | 45.0% | |
| GGTGAAGTTAGCAGAGGATA+TGG | + | chr1.2:10998784-10998803 | MS.gene059104:intron | 45.0% | |
| GTCATCGAAGCTGGAGAATA+TGG | - | chr1.2:10993691-10993710 | None:intergenic | 45.0% | |
| TAGCAGAGGATATGGTCTCT+AGG | + | chr1.2:10998792-10998811 | MS.gene059104:CDS | 45.0% | |
| TGGGAACGCACTACTTTATG+AGG | + | chr1.2:10994806-10994825 | MS.gene059104:intron | 45.0% | |
| TTCATCAGATGGATCACGTG+AGG | - | chr1.2:10997345-10997364 | None:intergenic | 45.0% | |
| TTTCCATGGACGGTGATTGT+AGG | - | chr1.2:10998926-10998945 | None:intergenic | 45.0% | |
| ! | AAACAAAGTCCCTGATGACG+TGG | - | chr1.2:10994669-10994688 | None:intergenic | 45.0% |
| ! | AGTATTACCGGTGCCAGAAA+TGG | - | chr1.2:10996440-10996459 | None:intergenic | 45.0% |
| ! | AGTTCTTGGGAGTGAGGTTT+TGG | - | chr1.2:10996384-10996403 | None:intergenic | 45.0% |
| ! | GTTCTTGGGAGTGAGGTTTT+GGG | - | chr1.2:10996383-10996402 | None:intergenic | 45.0% |
| ! | TAGTGGGTCCTTGTGAAAGA+GGG | + | chr1.2:10995833-10995852 | MS.gene059104:intron | 45.0% |
| ! | TTAGTGGGTCCTTGTGAAAG+AGG | + | chr1.2:10995832-10995851 | MS.gene059104:intron | 45.0% |
| !! | ATTGCTGTTTCGACGGTAAC+GGG | - | chr1.2:10993762-10993781 | None:intergenic | 45.0% |
| !! | CAATCATCCATTTCTGGCAC+CGG | + | chr1.2:10996430-10996449 | MS.gene059104:CDS | 45.0% |
| !! | GACTCTGATTTTGGAGAAGC+TGG | - | chr1.2:10998841-10998860 | None:intergenic | 45.0% |
| !! | GATTGCTGTTTCGACGGTAA+CGG | - | chr1.2:10993763-10993782 | None:intergenic | 45.0% |
| !!! | CACCGCCGATTTTCATAATC+TGG | + | chr1.2:10993860-10993879 | MS.gene059104:CDS | 45.0% |
| AACACTCCCCCTCTTTCACA+AGG | - | chr1.2:10995844-10995863 | None:intergenic | 50.0% | |
| AGCACATTTGGCAGACCTTG+AGG | + | chr1.2:10998181-10998200 | MS.gene059104:CDS | 50.0% | |
| AGCATCGCGAAATTGTTGGC+TGG | - | chr1.2:10998397-10998416 | None:intergenic | 50.0% | |
| AGTGGGTCCTTGTGAAAGAG+GGG | + | chr1.2:10995834-10995853 | MS.gene059104:intron | 50.0% | |
| CATGGAAACGGCGCTTCATA+TGG | + | chr1.2:10998938-10998957 | MS.gene059104:CDS | 50.0% | |
| CCAGCTTCGATGACCTCAAA+TGG | + | chr1.2:10993697-10993716 | MS.gene059104:CDS | 50.0% | |
| CTGGAGAATATGGAGGTTGC+TGG | - | chr1.2:10993681-10993700 | None:intergenic | 50.0% | |
| GCAGAGGATATGGTCTCTAG+GGG | + | chr1.2:10998794-10998813 | MS.gene059104:CDS | 50.0% | |
| GCGAAACATGCGCCATACAA+CGG | - | chr1.2:10998904-10998923 | None:intergenic | 50.0% | |
| TATGGAGGTTGCTGGCAGAA+TGG | - | chr1.2:10993673-10993692 | None:intergenic | 50.0% | |
| TGGACATGTCTCTCAACCGA+AGG | + | chr1.2:10995284-10995303 | MS.gene059104:intron | 50.0% | |
| TTGTGAAGGCCACGTCATCA+GGG | + | chr1.2:10994657-10994676 | MS.gene059104:intron | 50.0% | |
| TTTGGCAGACCTTGAGGTTC+AGG | + | chr1.2:10998187-10998206 | MS.gene059104:CDS | 50.0% | |
| ! | CCATTTGAGGTCATCGAAGC+TGG | - | chr1.2:10993700-10993719 | None:intergenic | 50.0% |
| ! | GGCAGAATGGTGCTCCATTT+TGG | - | chr1.2:10993660-10993679 | None:intergenic | 50.0% |
| ! | GGCGCTTCATATGGTGTTAG+TGG | + | chr1.2:10998947-10998966 | MS.gene059104:CDS | 50.0% |
| !! | AGTGTTGATTTGTGGCGGAG+TGG | - | chr1.2:10998873-10998892 | None:intergenic | 50.0% |
| !! | CATATGAAGCGCCGTTTCCA+TGG | - | chr1.2:10998940-10998959 | None:intergenic | 50.0% |
| !! | GCAGTGATGGTGGAGTTCTT+GGG | - | chr1.2:10996397-10996416 | None:intergenic | 50.0% |
| !! | GTCGTCGATTGCTGTTTCGA+CGG | - | chr1.2:10993769-10993788 | None:intergenic | 50.0% |
| !! | TGCAGTGATGGTGGAGTTCT+TGG | - | chr1.2:10996398-10996417 | None:intergenic | 50.0% |
| !! | TTAGGTTGAACAGCTGAGGC+TGG | + | chr1.2:10998338-10998357 | MS.gene059104:intron | 50.0% |
| ACATCGCCGACACCGATGAA+TGG | - | chr1.2:10993819-10993838 | None:intergenic | 55.0% | |
| CTAATCGCGAGTCTGCCAGA+AGG | + | chr1.2:10998141-10998160 | MS.gene059104:CDS | 55.0% | |
| CTTGTGAAGGCCACGTCATC+AGG | + | chr1.2:10994656-10994675 | MS.gene059104:intron | 55.0% | |
| GTGGGTCCTTGTGAAAGAGG+GGG | + | chr1.2:10995835-10995854 | MS.gene059104:intron | 55.0% | |
| TCGCCTACAATCACCGTCCA+TGG | + | chr1.2:10998920-10998939 | MS.gene059104:CDS | 55.0% | |
| TGGTGGAGTTCTTGGGAGTG+AGG | - | chr1.2:10996390-10996409 | None:intergenic | 55.0% | |
| !! | TGAAGCGCCGTTTCCATGGA+CGG | - | chr1.2:10998936-10998955 | None:intergenic | 55.0% |
| !! | GGTGTCGGCGATGTTTGCTC+TGG | + | chr1.2:10993825-10993844 | MS.gene059104:CDS | 60.0% |
| GGTGGTCGGGGTTTGAACCC+CGG | - | chr1.2:10994994-10995013 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 10993651 | 10999078 | 10993651 | ID=MS.gene059104 |
| chr1.2 | mRNA | 10993651 | 10999078 | 10993651 | ID=MS.gene059104.t1;Parent=MS.gene059104 |
| chr1.2 | exon | 10993651 | 10993881 | 10993651 | ID=MS.gene059104.t1.exon1;Parent=MS.gene059104.t1 |
| chr1.2 | CDS | 10993651 | 10993881 | 10993651 | ID=cds.MS.gene059104.t1;Parent=MS.gene059104.t1 |
| chr1.2 | exon | 10996322 | 10996451 | 10996322 | ID=MS.gene059104.t1.exon2;Parent=MS.gene059104.t1 |
| chr1.2 | CDS | 10996322 | 10996451 | 10996322 | ID=cds.MS.gene059104.t1;Parent=MS.gene059104.t1 |
| chr1.2 | exon | 10997264 | 10997426 | 10997264 | ID=MS.gene059104.t1.exon3;Parent=MS.gene059104.t1 |
| chr1.2 | CDS | 10997264 | 10997426 | 10997264 | ID=cds.MS.gene059104.t1;Parent=MS.gene059104.t1 |
| chr1.2 | exon | 10998133 | 10998208 | 10998133 | ID=MS.gene059104.t1.exon4;Parent=MS.gene059104.t1 |
| chr1.2 | CDS | 10998133 | 10998208 | 10998133 | ID=cds.MS.gene059104.t1;Parent=MS.gene059104.t1 |
| chr1.2 | exon | 10998342 | 10998467 | 10998342 | ID=MS.gene059104.t1.exon5;Parent=MS.gene059104.t1 |
| chr1.2 | CDS | 10998342 | 10998467 | 10998342 | ID=cds.MS.gene059104.t1;Parent=MS.gene059104.t1 |
| chr1.2 | exon | 10998785 | 10999078 | 10998785 | ID=MS.gene059104.t1.exon6;Parent=MS.gene059104.t1 |
| chr1.2 | CDS | 10998785 | 10999078 | 10998785 | ID=cds.MS.gene059104.t1;Parent=MS.gene059104.t1 |
| Gene Sequence |
| Protein sequence |
