Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31704.t1 | XP_003588386.2 | 97.3 | 715 | 14 | 1 | 1 | 715 | 1 | 710 | 0.00E+00 | 1404 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31704.t1 | Q8RXH2 | 64.5 | 710 | 244 | 3 | 9 | 715 | 11 | 715 | 9.0e-274 | 944.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31704.t1 | G7IB50 | 97.3 | 715 | 14 | 1 | 1 | 715 | 1 | 710 | 0.0e+00 | 1404.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31704 | MS.gene006962 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31704.t1 | MTR_1g006690 | 97.343 | 715 | 14 | 1 | 1 | 715 | 1 | 710 | 0.0 | 1432 |
| MS.gene31704.t1 | MTR_1g006690 | 97.368 | 494 | 13 | 0 | 222 | 715 | 33 | 526 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31704.t1 | AT4G32910 | 64.416 | 711 | 245 | 3 | 8 | 715 | 10 | 715 | 0.0 | 941 |
Find 187 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCAATTGAATGCACTTC+TGG | 0.146118 | 1.1:-12559734 | None:intergenic |
| AACTGGACTGCAGTCCATTT+TGG | 0.169208 | 1.1:+12559406 | MS.gene31704:CDS |
| AACAGTTGAAGTTGCTAAAT+TGG | 0.174426 | 1.1:+12565473 | MS.gene31704:intron |
| TGAATCTGCTGCTGGAAATT+TGG | 0.191846 | 1.1:+12559215 | MS.gene31704:CDS |
| GGAAGGCTTAATTGAGTTAT+TGG | 0.193560 | 1.1:+12561332 | MS.gene31704:CDS |
| AGGACGTAATCGAGGCATTT+TGG | 0.226952 | 1.1:-12559193 | None:intergenic |
| TGACATCACTTCCCAATATC+TGG | 0.236955 | 1.1:-12558778 | None:intergenic |
| AACCAATCAACAAGCCTTTC+AGG | 0.238952 | 1.1:-12556594 | None:intergenic |
| ATGCAAGATGTTAAATATAT+TGG | 0.247787 | 1.1:-12560659 | None:intergenic |
| CATCAACCCCTCAGCGCTTT+TGG | 0.251093 | 1.1:+12563495 | MS.gene31704:CDS |
| TCTGTACAGCTTCATGTTAC+TGG | 0.257694 | 1.1:+12559505 | MS.gene31704:CDS |
| GTAAAGGTGCTGGAGTATTT+TGG | 0.298412 | 1.1:+12561084 | MS.gene31704:CDS |
| AGTACCTTAACAATTTCATT+TGG | 0.305958 | 1.1:-12556387 | None:intergenic |
| GGTTGCTGAGCTGGTCTAAT+TGG | 0.308819 | 1.1:-12558949 | None:intergenic |
| GTTCCGTTGTCGACGGTGTT+GGG | 0.320387 | 1.1:-12554962 | None:intergenic |
| GAAATGGCGAGGCGAGAAAT+TGG | 0.321991 | 1.1:-12555058 | None:intergenic |
| TTGTTGGTTTCGCCGGAGAA+TGG | 0.322423 | 1.1:-12554992 | None:intergenic |
| AGTAGAAAGCATGTATAATT+TGG | 0.322991 | 1.1:+12559710 | MS.gene31704:CDS |
| CAAACTTCAAGAGTTATCTT+TGG | 0.325826 | 1.1:+12565543 | MS.gene31704:CDS |
| TCATTTGGGTCTTCAATAAT+CGG | 0.326782 | 1.1:-12556372 | None:intergenic |
| GAATCTGCTGCTGGAAATTT+GGG | 0.332696 | 1.1:+12559216 | MS.gene31704:CDS |
| GAGGTCACAAATTACTAAAC+TGG | 0.342916 | 1.1:+12559389 | MS.gene31704:CDS |
| ATTAAACTTACGATCATAAA+TGG | 0.349521 | 1.1:-12559564 | None:intergenic |
| TCGGTGGTTCAGTTAGAAAA+TGG | 0.352849 | 1.1:+12559141 | MS.gene31704:intron |
| TTTCTCGCCTCGCCATTTCC+TGG | 0.356285 | 1.1:+12555062 | MS.gene31704:CDS |
| TCGAGGATGATCCCAGATAT+TGG | 0.361641 | 1.1:+12558766 | MS.gene31704:CDS |
| TTATCACACTGAATCCAAAA+TGG | 0.362532 | 1.1:-12559420 | None:intergenic |
| TTTCGCCGGAGAATGGGATT+AGG | 0.367192 | 1.1:-12554985 | None:intergenic |
| GCAGAAATTTCCAGAGAATT+CGG | 0.377381 | 1.1:+12559935 | MS.gene31704:CDS |
| ACACAACAACGTGTTGCTTA+AGG | 0.387208 | 1.1:+12560733 | MS.gene31704:CDS |
| AAATTTCCAGCAGCAGATTC+AGG | 0.388449 | 1.1:-12559213 | None:intergenic |
| GTACCTTAACAATTTCATTT+GGG | 0.391570 | 1.1:-12556386 | None:intergenic |
| GAAGGCTTAATTGAGTTATT+GGG | 0.393418 | 1.1:+12561333 | MS.gene31704:CDS |
| GGTTCCGTTGTCGACGGTGT+TGG | 0.395020 | 1.1:-12554963 | None:intergenic |
| TTCGCCGGAGAATGGGATTA+GGG | 0.395335 | 1.1:-12554984 | None:intergenic |
| CTCAAGCACTGAGTTCTATT+AGG | 0.397034 | 1.1:+12565605 | MS.gene31704:CDS |
| CGAGGATGATCCCAGATATT+GGG | 0.408443 | 1.1:+12558767 | MS.gene31704:CDS |
| TTATCTCCTTGCTATATTGA+AGG | 0.410951 | 1.1:-12556314 | None:intergenic |
| TGTAAATTAATACCAGTATG+AGG | 0.416262 | 1.1:-12561576 | None:intergenic |
| AAACTTGCTACAAGTTATGC+TGG | 0.419969 | 1.1:+12559467 | MS.gene31704:CDS |
| TACTTTGATAAAGTCAGGCT+TGG | 0.420018 | 1.1:-12559253 | None:intergenic |
| ACATGATGAGCGTTATAACT+TGG | 0.421274 | 1.1:+12560257 | MS.gene31704:CDS |
| TGTTGGTTTCGCCGGAGAAT+GGG | 0.423799 | 1.1:-12554991 | None:intergenic |
| CTGGCTCTAGCAACAAATCT+TGG | 0.425294 | 1.1:+12565628 | MS.gene31704:CDS |
| GCTTCTCGTTGGGCCAAAGT+TGG | 0.426445 | 1.1:+12556341 | MS.gene31704:CDS |
| GAAAGCTGCATGGGAGTTGA+TGG | 0.426543 | 1.1:+12556533 | MS.gene31704:CDS |
| TGGAATTCTTGGAGAAAATA+CGG | 0.426634 | 1.1:+12559794 | MS.gene31704:CDS |
| TTGTTTAATATATAGGTTGC+TGG | 0.430551 | 1.1:+12561038 | MS.gene31704:intron |
| TTTCAATTGAATGCACTTCT+GGG | 0.432988 | 1.1:-12559733 | None:intergenic |
| AAGATACAAACAGTCTTGAT+AGG | 0.434188 | 1.1:+12561120 | MS.gene31704:CDS |
| CTTCTCGTTGGGCCAAAGTT+GGG | 0.435058 | 1.1:+12556342 | MS.gene31704:CDS |
| GGATATACTTTGATAAAGTC+AGG | 0.436579 | 1.1:-12559258 | None:intergenic |
| ATGAATTGTTTCTTGTGTAC+TGG | 0.437719 | 1.1:-12556739 | None:intergenic |
| AGACCCAAATGAAATTGTTA+AGG | 0.438019 | 1.1:+12556383 | MS.gene31704:CDS |
| GAATGATCTTGTTAACATAC+AGG | 0.439241 | 1.1:+12556782 | MS.gene31704:CDS |
| CTTCTACGTATCAGCTAGAT+TGG | 0.440441 | 1.1:+12555311 | MS.gene31704:CDS |
| CAATCTAGCTGATACGTAGA+AGG | 0.441210 | 1.1:-12555310 | None:intergenic |
| TACCTGAAAGGCTTGTTGAT+TGG | 0.446469 | 1.1:+12556592 | MS.gene31704:CDS |
| TCAGTTAGAAAATGGATTAG+TGG | 0.447691 | 1.1:+12559149 | MS.gene31704:intron |
| CAACAGAAGGTTCTGCGAAA+AGG | 0.451539 | 1.1:-12555111 | None:intergenic |
| GGGTGAGAGTGTGGTGGAGA+GGG | 0.454820 | 1.1:-12555033 | None:intergenic |
| GGGTCTTCAATAATCGGACT+AGG | 0.455946 | 1.1:-12556366 | None:intergenic |
| TTAAAAGTCCAGTCAACCTA+TGG | 0.457677 | 1.1:-12559770 | None:intergenic |
| TCCCTTCAGATGGTATATAG+TGG | 0.458712 | 1.1:+12561517 | MS.gene31704:CDS |
| AGCTGTAGGCTCCCTCATAC+TGG | 0.459035 | 1.1:+12561564 | MS.gene31704:CDS |
| TTCCGTTGTCGACGGTGTTG+GGG | 0.462046 | 1.1:-12554961 | None:intergenic |
| AGTACACAAGAAACAATTCA+TGG | 0.462245 | 1.1:+12556741 | MS.gene31704:CDS |
| CAAAAGCGCTGAGGGGTTGA+TGG | 0.463978 | 1.1:-12563494 | None:intergenic |
| TTTCCAGAGAATTCGGTCCT+TGG | 0.465642 | 1.1:+12559942 | MS.gene31704:CDS |
| CACTGGAAGCATGGTCGTAA+AGG | 0.470394 | 1.1:+12561068 | MS.gene31704:CDS |
| GTTGCCGCGGGACCAGGAAA+TGG | 0.471481 | 1.1:-12555074 | None:intergenic |
| ATACCTCACGGTTGCTGAGC+TGG | 0.475934 | 1.1:-12558958 | None:intergenic |
| AACAGAAGGTTCTGCGAAAA+GGG | 0.476136 | 1.1:-12555110 | None:intergenic |
| AGATAACATCGCTTCTCGTT+GGG | 0.476964 | 1.1:+12556331 | MS.gene31704:CDS |
| TTTCTTGTGTACTGGTAAAG+AGG | 0.478084 | 1.1:-12556731 | None:intergenic |
| GAGGGAGTTGCCGCGGGACC+AGG | 0.481174 | 1.1:-12555080 | None:intergenic |
| TTACGTCCTGAATCTGCTGC+TGG | 0.483641 | 1.1:+12559207 | MS.gene31704:CDS |
| TCACCAAGGACCGAATTCTC+TGG | 0.484642 | 1.1:-12559945 | None:intergenic |
| TAATAGAACTCAGTGCTTGA+GGG | 0.485123 | 1.1:-12565603 | None:intergenic |
| ATCGGACTAGGGCCCAACTT+TGG | 0.488711 | 1.1:-12556354 | None:intergenic |
| GTGAAAATGTTGCGGTTGCA+TGG | 0.492578 | 1.1:+12558920 | MS.gene31704:CDS |
| TCTTGCATGAAGCAAGGAAT+GGG | 0.493653 | 1.1:+12560674 | MS.gene31704:CDS |
| AGTTGGTTGGCTAGATATAG+TGG | 0.495746 | 1.1:+12558812 | MS.gene31704:CDS |
| GACGCGGAGGGAGTTGCCGC+GGG | 0.496115 | 1.1:-12555086 | None:intergenic |
| CGACTCTGAAGCAACGCAAA+CGG | 0.501415 | 1.1:-12555256 | None:intergenic |
| TCCGGCGAAACCTCCGATGC+CGG | 0.501611 | 1.1:+12555139 | MS.gene31704:CDS |
| CTAATAGAACTCAGTGCTTG+AGG | 0.501748 | 1.1:-12565604 | None:intergenic |
| AGCACTGAGTTCTATTAGGC+TGG | 0.504352 | 1.1:+12565609 | MS.gene31704:CDS |
| TTGTGACCTCCATTTCTCCC+AGG | 0.507500 | 1.1:-12559376 | None:intergenic |
| CGGGTGAGAGTGTGGTGGAG+AGG | 0.508221 | 1.1:-12555034 | None:intergenic |
| CGGAGATTGATGATGCTGAT+TGG | 0.511466 | 1.1:+12555206 | MS.gene31704:CDS |
| GAACCTTCTGTTGCTCCCTC+CGG | 0.512925 | 1.1:+12555121 | MS.gene31704:CDS |
| AAGCATGGTCGTAAAGGTGC+TGG | 0.514756 | 1.1:+12561074 | MS.gene31704:CDS |
| GGATCTGAATCTAAGCCTGC+TGG | 0.515189 | 1.1:+12561354 | MS.gene31704:CDS |
| GAGATAACATCGCTTCTCGT+TGG | 0.516130 | 1.1:+12556330 | MS.gene31704:CDS |
| GGGGCAGCCAAAAGCGCTGA+GGG | 0.516515 | 1.1:-12563502 | None:intergenic |
| TAAGCTCGGAGGTGGAGATC+CGG | 0.518121 | 1.1:+12555186 | MS.gene31704:CDS |
| GCCGTGGAATTATTAACTGC+AGG | 0.518286 | 1.1:+12560210 | MS.gene31704:CDS |
| CATGATGAGCGTTATAACTT+GGG | 0.523441 | 1.1:+12560258 | MS.gene31704:CDS |
| AGAGTTGTTGTTGGTTTCGC+CGG | 0.524721 | 1.1:-12554999 | None:intergenic |
| GAAACCTCCGATGCCGGAGA+TGG | 0.527051 | 1.1:+12555145 | MS.gene31704:CDS |
| TCCGGCATCGGAGGTTTCGC+CGG | 0.527279 | 1.1:-12555140 | None:intergenic |
| AGGTTGCTGGAGTCTATCAC+TGG | 0.527813 | 1.1:+12561051 | MS.gene31704:intron |
| ATTGAAGTTAAGCTCGGAGG+TGG | 0.531198 | 1.1:+12555178 | MS.gene31704:CDS |
| CAACAGTTATTTGATTCAGT+GGG | 0.531793 | 1.1:+12561149 | MS.gene31704:CDS |
| GACATCACTTCCCAATATCT+GGG | 0.533296 | 1.1:-12558777 | None:intergenic |
| ACTGGTACCCATAGGTTGAC+TGG | 0.536812 | 1.1:+12559762 | MS.gene31704:CDS |
| ATCTTGCATGAAGCAAGGAA+TGG | 0.537314 | 1.1:+12560673 | MS.gene31704:CDS |
| ACAACAGTTATTTGATTCAG+TGG | 0.537824 | 1.1:+12561148 | MS.gene31704:CDS |
| CTCAAGCATGGCTACCTGAA+AGG | 0.537969 | 1.1:+12556580 | MS.gene31704:CDS |
| CAATCAGCATCATCAATCTC+CGG | 0.538504 | 1.1:-12555205 | None:intergenic |
| GATTGCGAGAGAGTTGTTGT+TGG | 0.539653 | 1.1:-12555008 | None:intergenic |
| AACAATTCATGGCAAGCTAG+TGG | 0.539756 | 1.1:+12556752 | MS.gene31704:CDS |
| GCTGCCCCTTCTGGTTGACT+CGG | 0.543207 | 1.1:+12563517 | MS.gene31704:CDS |
| TTCCACTATATACCATCTGA+AGG | 0.545506 | 1.1:-12561519 | None:intergenic |
| GCATCGGAGGTTTCGCCGGA+GGG | 0.546255 | 1.1:-12555136 | None:intergenic |
| ATTCAATTGAAACCACCTAC+TGG | 0.546457 | 1.1:+12559744 | MS.gene31704:CDS |
| TTGCGTTGCTTCAGAGTCGC+CGG | 0.548587 | 1.1:+12555260 | MS.gene31704:CDS |
| AGTTAGGCTCAGTGAAGTGC+GGG | 0.549137 | 1.1:-12565576 | None:intergenic |
| CATCTGCATTGTCAGTTGGT+TGG | 0.554242 | 1.1:+12558799 | MS.gene31704:CDS |
| TGCGCCATCTCCGGCATCGG+AGG | 0.555572 | 1.1:-12555149 | None:intergenic |
| CATGCAGCTTTCAAACATGT+TGG | 0.555788 | 1.1:-12556522 | None:intergenic |
| TCAGTATGGTGGAACTTCAT+CGG | 0.561377 | 1.1:+12560286 | MS.gene31704:CDS |
| CTCGCCATTTCCTGGTCCCG+CGG | 0.562401 | 1.1:+12555070 | MS.gene31704:CDS |
| TCGCCGGAGGGAGCAACAGA+AGG | 0.567575 | 1.1:-12555124 | None:intergenic |
| GTAAATTAATACCAGTATGA+GGG | 0.568574 | 1.1:-12561575 | None:intergenic |
| ATGTCATCTGCATTGTCAGT+TGG | 0.568749 | 1.1:+12558795 | MS.gene31704:CDS |
| GGCATCGGAGGTTTCGCCGG+AGG | 0.569273 | 1.1:-12555137 | None:intergenic |
| TATCATCACATGCATTGACA+TGG | 0.570630 | 1.1:+12560328 | MS.gene31704:CDS |
| AACATGTTTGAAAGCTGCAT+GGG | 0.571606 | 1.1:+12556524 | MS.gene31704:CDS |
| TCCACTATATACCATCTGAA+GGG | 0.571859 | 1.1:-12561518 | None:intergenic |
| AGACGCGGAGGGAGTTGCCG+CGG | 0.572276 | 1.1:-12555087 | None:intergenic |
| TTTGTTCATGCAGGTTATCG+AGG | 0.581705 | 1.1:+12558749 | MS.gene31704:intron |
| CAACATGTTTGAAAGCTGCA+TGG | 0.581798 | 1.1:+12556523 | MS.gene31704:CDS |
| TAAAAGTCCAGTCAACCTAT+GGG | 0.583832 | 1.1:-12559769 | None:intergenic |
| GGTCTTCAATAATCGGACTA+GGG | 0.584981 | 1.1:-12556365 | None:intergenic |
| AACTTGCTACAAGTTATGCT+GGG | 0.587027 | 1.1:+12559468 | MS.gene31704:CDS |
| TTAACATCTTGCATGAAGCA+AGG | 0.589370 | 1.1:+12560668 | MS.gene31704:CDS |
| TATCAGTTCAAATATCATGA+AGG | 0.592690 | 1.1:+12560905 | MS.gene31704:CDS |
| GATTAGGGTTCCGTTGTCGA+CGG | 0.593798 | 1.1:-12554969 | None:intergenic |
| GGAACCCTAATCCCATTCTC+CGG | 0.597230 | 1.1:+12554980 | MS.gene31704:CDS |
| ATGATGAGCGTTATAACTTG+GGG | 0.597621 | 1.1:+12560259 | MS.gene31704:CDS |
| CCCTGCAGTTAATAATTCCA+CGG | 0.599759 | 1.1:-12560211 | None:intergenic |
| TATAGGCCTGGGAGAAATGG+AGG | 0.599849 | 1.1:+12559370 | MS.gene31704:intron |
| CGCGGGACCAGGAAATGGCG+AGG | 0.600086 | 1.1:-12555069 | None:intergenic |
| ACATATTCGAAATCGCACTC+CGG | 0.600872 | 1.1:-12555279 | None:intergenic |
| GGAGTCTATCACTGGAAGCA+TGG | 0.601861 | 1.1:+12561059 | MS.gene31704:CDS |
| GTTAGAAAATGGATTAGTGG+AGG | 0.602718 | 1.1:+12559152 | MS.gene31704:intron |
| TTCAAGAGTTATCTTTGGCG+AGG | 0.603017 | 1.1:+12565548 | MS.gene31704:CDS |
| GTCTCAGATACACTGAGAAG+AGG | 0.605666 | 1.1:-12565505 | None:intergenic |
| AAAGTCATTGAAGTTAAGCT+CGG | 0.606499 | 1.1:+12555172 | MS.gene31704:CDS |
| GGCGAGGCGAGAAATTGGAC+GGG | 0.607784 | 1.1:-12555053 | None:intergenic |
| TGCGAAAAGGGAGACGCGGA+GGG | 0.611385 | 1.1:-12555098 | None:intergenic |
| CTGCGAAAAGGGAGACGCGG+AGG | 0.611997 | 1.1:-12555099 | None:intergenic |
| TAGGATGGTTGCACACGCCG+TGG | 0.614378 | 1.1:+12560194 | MS.gene31704:intron |
| TGGCGAGGCGAGAAATTGGA+CGG | 0.614897 | 1.1:-12555054 | None:intergenic |
| CCGTGGAATTATTAACTGCA+GGG | 0.616694 | 1.1:+12560211 | MS.gene31704:CDS |
| TCCGTTGTCGACGGTGTTGG+GGG | 0.620804 | 1.1:-12554960 | None:intergenic |
| GATTGGCGAAGAATTGCGTA+TGG | 0.621414 | 1.1:+12555223 | MS.gene31704:CDS |
| ACTCACCGAGTCAACCAGAA+GGG | 0.625812 | 1.1:-12563522 | None:intergenic |
| GATGCTGCTAGACAAGCTGT+AGG | 0.628250 | 1.1:+12561550 | MS.gene31704:CDS |
| TGGACAAACAATCTCAAGCA+TGG | 0.630226 | 1.1:+12556568 | MS.gene31704:CDS |
| AATAGAACTCAGTGCTTGAG+GGG | 0.630771 | 1.1:-12565602 | None:intergenic |
| ATTTGCAGGTGAAAATGTTG+CGG | 0.633777 | 1.1:+12558912 | MS.gene31704:intron |
| TGATAATCAACAAACTCGCG+AGG | 0.638932 | 1.1:+12559437 | MS.gene31704:CDS |
| TGATGAGCGTTATAACTTGG+GGG | 0.639014 | 1.1:+12560260 | MS.gene31704:CDS |
| TACTCACCGAGTCAACCAGA+AGG | 0.640440 | 1.1:-12563523 | None:intergenic |
| AACCTATGGGTACCAGTAGG+TGG | 0.640501 | 1.1:-12559756 | None:intergenic |
| AAGTTAGGCTCAGTGAAGTG+CGG | 0.643977 | 1.1:-12565577 | None:intergenic |
| AGGGGCAGCCAAAAGCGCTG+AGG | 0.644717 | 1.1:-12563503 | None:intergenic |
| GCATGTCCTTCAATATAGCA+AGG | 0.645616 | 1.1:+12556308 | MS.gene31704:CDS |
| CTCACCGAGTCAACCAGAAG+GGG | 0.648465 | 1.1:-12563521 | None:intergenic |
| GCAGATTCAGGACGTAATCG+AGG | 0.649804 | 1.1:-12559201 | None:intergenic |
| TCTATTCATCAAGTATAGCA+CGG | 0.650831 | 1.1:-12565651 | None:intergenic |
| GATGAGCGTTATAACTTGGG+GGG | 0.652204 | 1.1:+12560261 | MS.gene31704:CDS |
| AAATTGGACGGGTGAGAGTG+TGG | 0.665675 | 1.1:-12555042 | None:intergenic |
| TTGGACGGGTGAGAGTGTGG+TGG | 0.666528 | 1.1:-12555039 | None:intergenic |
| GTCATTGAAGTTAAGCTCGG+AGG | 0.671935 | 1.1:+12555175 | MS.gene31704:CDS |
| GTCAACCTATGGGTACCAGT+AGG | 0.678788 | 1.1:-12559759 | None:intergenic |
| ATAGAACTCAGTGCTTGAGG+GGG | 0.685115 | 1.1:-12565601 | None:intergenic |
| TCTGAATCTAAGCCTGCTGG+AGG | 0.694325 | 1.1:+12561357 | MS.gene31704:CDS |
| GATAATCAACAAACTCGCGA+GGG | 0.694963 | 1.1:+12559438 | MS.gene31704:CDS |
| AACCACCTACTGGTACCCAT+AGG | 0.703412 | 1.1:+12559754 | MS.gene31704:CDS |
| GGGCAGCCAAAAGCGCTGAG+GGG | 0.710143 | 1.1:-12563501 | None:intergenic |
| GTTCTGCGAAAAGGGAGACG+CGG | 0.716200 | 1.1:-12555102 | None:intergenic |
| AGACCAGCTCAGCAACCGTG+AGG | 0.718063 | 1.1:+12558955 | MS.gene31704:CDS |
| AATTCTTGGAGAAAATACGG+AGG | 0.749443 | 1.1:+12559797 | MS.gene31704:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 12554956 | 12565672 | 12554956 | ID=MS.gene31704 |
| chr1.1 | mRNA | 12554956 | 12565672 | 12554956 | ID=MS.gene31704.t1;Parent=MS.gene31704 |
| chr1.1 | exon | 12554956 | 12555332 | 12554956 | ID=MS.gene31704.t1.exon1;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12554956 | 12555332 | 12554956 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12556302 | 12556404 | 12556302 | ID=MS.gene31704.t1.exon2;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12556302 | 12556404 | 12556302 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12556510 | 12556620 | 12556510 | ID=MS.gene31704.t1.exon3;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12556510 | 12556620 | 12556510 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12556720 | 12556803 | 12556720 | ID=MS.gene31704.t1.exon4;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12556720 | 12556803 | 12556720 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12558762 | 12558833 | 12558762 | ID=MS.gene31704.t1.exon5;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12558762 | 12558833 | 12558762 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12558920 | 12558976 | 12558920 | ID=MS.gene31704.t1.exon6;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12558920 | 12558976 | 12558920 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12559153 | 12559272 | 12559153 | ID=MS.gene31704.t1.exon7;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12559153 | 12559272 | 12559153 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12559375 | 12559575 | 12559375 | ID=MS.gene31704.t1.exon8;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12559375 | 12559575 | 12559375 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12559708 | 12559818 | 12559708 | ID=MS.gene31704.t1.exon9;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12559708 | 12559818 | 12559708 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12559926 | 12559963 | 12559926 | ID=MS.gene31704.t1.exon10;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12559926 | 12559963 | 12559926 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12560197 | 12560353 | 12560197 | ID=MS.gene31704.t1.exon11;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12560197 | 12560353 | 12560197 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12560653 | 12560754 | 12560653 | ID=MS.gene31704.t1.exon12;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12560653 | 12560754 | 12560653 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12560870 | 12560926 | 12560870 | ID=MS.gene31704.t1.exon13;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12560870 | 12560926 | 12560870 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12561053 | 12561199 | 12561053 | ID=MS.gene31704.t1.exon14;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12561053 | 12561199 | 12561053 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12561327 | 12561397 | 12561327 | ID=MS.gene31704.t1.exon15;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12561327 | 12561397 | 12561327 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12561498 | 12561585 | 12561498 | ID=MS.gene31704.t1.exon16;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12561498 | 12561585 | 12561498 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12563482 | 12563538 | 12563482 | ID=MS.gene31704.t1.exon17;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12563482 | 12563538 | 12563482 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| chr1.1 | exon | 12565478 | 12565672 | 12565478 | ID=MS.gene31704.t1.exon18;Parent=MS.gene31704.t1 |
| chr1.1 | CDS | 12565478 | 12565672 | 12565478 | ID=cds.MS.gene31704.t1;Parent=MS.gene31704.t1 |
| Gene Sequence |
| Protein sequence |
