Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32190.t1 | XP_024637216.1 | 97.6 | 502 | 12 | 0 | 1 | 502 | 11 | 512 | 3.00E-283 | 983.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32190.t1 | Q9SQT8 | 72.2 | 504 | 137 | 2 | 1 | 502 | 101 | 603 | 3.5e-208 | 725.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32190.t1 | I3T8Z3 | 97.2 | 505 | 11 | 1 | 1 | 502 | 11 | 515 | 1.8e-282 | 980.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052540 | MS.gene32190 | 0.915124 | 8.54E-85 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32190.t1 | MTR_4g090620 | 91.411 | 489 | 28 | 2 | 1 | 489 | 11 | 485 | 0.0 | 876 |
| MS.gene32190.t1 | MTR_7g114190 | 37.278 | 338 | 161 | 6 | 101 | 435 | 5 | 294 | 1.03e-63 | 209 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32190.t1 | AT3G06350 | 72.222 | 504 | 137 | 2 | 1 | 502 | 101 | 603 | 0.0 | 708 |
Find 114 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCGTTCTTGTTCACTTAC+AGG | 0.158590 | 4.4:+22894317 | MS.gene32190:CDS |
| CGTATACTTTGTGCAAAATT+TGG | 0.173415 | 4.4:+22895819 | MS.gene32190:CDS |
| GTTATTGGGGCCGGTGGTGC+TGG | 0.178808 | 4.4:+22897765 | MS.gene32190:CDS |
| GGTAAGCTGTTTGTTGTTAT+TGG | 0.204026 | 4.4:+22897750 | MS.gene32190:CDS |
| GTAAGCTGTTTGTTGTTATT+GGG | 0.209152 | 4.4:+22897751 | MS.gene32190:CDS |
| GGACCTGATACAAAAGTATA+TGG | 0.246424 | 4.4:+22895942 | MS.gene32190:CDS |
| ACAGGACTGGAGATGTTTAT+TGG | 0.265366 | 4.4:+22899374 | MS.gene32190:CDS |
| TCCATTCATTGGACTTGTTA+TGG | 0.267088 | 4.4:+22895776 | MS.gene32190:CDS |
| GAAGGCTTCATTGAACAATA+TGG | 0.271186 | 4.4:-22896000 | None:intergenic |
| GGCGCGGATGTTTCAAATTA+TGG | 0.276023 | 4.4:+22895159 | MS.gene32190:CDS |
| AGAACTCTTCAGAAATATTA+TGG | 0.285586 | 4.4:+22899592 | MS.gene32190:CDS |
| ATCAAAACCAATTGTCTTGA+AGG | 0.319919 | 4.4:-22896018 | None:intergenic |
| TTTGGTGGGTATCTTACTTT+TGG | 0.321545 | 4.4:+22895837 | MS.gene32190:CDS |
| AAATTCCAGGTTCCATTCAT+TGG | 0.330251 | 4.4:+22895765 | MS.gene32190:intron |
| ACAGGTGTTTCATCAACTTT+TGG | 0.331032 | 4.4:-22898524 | None:intergenic |
| ATATTTCTGAAGAGTTCTTT+TGG | 0.340525 | 4.4:-22899587 | None:intergenic |
| GCTGGGAAGGCACTTGCTTA+TGG | 0.344432 | 4.4:+22897783 | MS.gene32190:CDS |
| TACATACCACCTTCCCATTT+GGG | 0.345206 | 4.4:-22894456 | None:intergenic |
| TTACATTGACGTTGAACTTA+AGG | 0.345605 | 4.4:+22894539 | MS.gene32190:CDS |
| CCATTCATTGGACTTGTTAT+GGG | 0.346230 | 4.4:+22895777 | MS.gene32190:CDS |
| ATACATACCACCTTCCCATT+TGG | 0.350326 | 4.4:-22894457 | None:intergenic |
| CGACAATATGAGCATTATAC+TGG | 0.370012 | 4.4:+22899407 | MS.gene32190:CDS |
| TTGAAAGAAGCAGAAGAATC+TGG | 0.381681 | 4.4:+22899338 | MS.gene32190:CDS |
| AATGAAGCCTTCAAGACAAT+TGG | 0.388263 | 4.4:+22896011 | MS.gene32190:CDS |
| TTATTGGGGCCGGTGGTGCT+GGG | 0.401637 | 4.4:+22897766 | MS.gene32190:CDS |
| CAACCTCGTCACAACACTTA+AGG | 0.412513 | 4.4:-22897358 | None:intergenic |
| ACAAAAGTATATGGGATTGT+TGG | 0.413162 | 4.4:+22895951 | MS.gene32190:CDS |
| TCTGGAGCCACTATTGTAAC+AGG | 0.414913 | 4.4:+22899356 | MS.gene32190:CDS |
| GTTGCAAGAATACAAGCAAC+TGG | 0.416406 | 4.4:+22895088 | MS.gene32190:CDS |
| GCTATTTCTGCTATTGAGGA+TGG | 0.424228 | 4.4:+22897582 | MS.gene32190:CDS |
| GAATTGGTTACACAGTCAAT+AGG | 0.430150 | 4.4:+22897489 | MS.gene32190:intron |
| AACCTCGTCACAACACTTAA+GGG | 0.433794 | 4.4:-22897357 | None:intergenic |
| AAATAGCATACCTTTGAAAC+AGG | 0.438226 | 4.4:-22898542 | None:intergenic |
| CTATACAATTTCAGACAACT+TGG | 0.439985 | 4.4:+22895921 | MS.gene32190:CDS |
| ACTCCGTCAGTTGACGATCT+TGG | 0.444580 | 4.4:+22895058 | MS.gene32190:CDS |
| TGGGGCCGGTGGTGCTGGGA+AGG | 0.445473 | 4.4:+22897770 | MS.gene32190:CDS |
| CCAACAGATGGGAAGTTGAT+TGG | 0.446923 | 4.4:+22897537 | MS.gene32190:CDS |
| AAGGCTTCATTGAACAATAT+GGG | 0.447559 | 4.4:-22895999 | None:intergenic |
| TTGGACTTGTTATGGGCGAC+AGG | 0.448844 | 4.4:+22895784 | MS.gene32190:CDS |
| ATCAACGCTTGGATGCATTA+CGG | 0.453875 | 4.4:+22894493 | MS.gene32190:CDS |
| TGGTGCTATTTCTGCTATTG+AGG | 0.455359 | 4.4:+22897578 | MS.gene32190:CDS |
| GATTACATCAGCAAGTTCTC+TGG | 0.463591 | 4.4:-22898411 | None:intergenic |
| CTAGCAAACACAACTTCAAT+CGG | 0.472513 | 4.4:+22898494 | MS.gene32190:CDS |
| GAGCATTATACTGGATTGCC+AGG | 0.481705 | 4.4:+22899416 | MS.gene32190:CDS |
| ACAAACAGCTTACCAGCTAA+TGG | 0.483108 | 4.4:-22897741 | None:intergenic |
| ACAGCTGTTTCGCCATTAGC+TGG | 0.484838 | 4.4:+22897729 | MS.gene32190:CDS |
| CTCCAGTCCTGTTACAATAG+TGG | 0.488995 | 4.4:-22899363 | None:intergenic |
| TCCAGGTCAACCTACACTTA+AGG | 0.491107 | 4.4:+22895887 | MS.gene32190:CDS |
| CTGTTTGTTGTTATTGGGGC+CGG | 0.492358 | 4.4:+22897756 | MS.gene32190:CDS |
| CTATTTCTGCTATTGAGGAT+GGG | 0.499559 | 4.4:+22897583 | MS.gene32190:CDS |
| GTGATTGCAAACCGCACCTA+TGG | 0.499726 | 4.4:+22897831 | MS.gene32190:CDS |
| TCCTTAAGTGTAGGTTGACC+TGG | 0.501004 | 4.4:-22895888 | None:intergenic |
| GCTAGAATCATACCATCCTC+TGG | 0.504787 | 4.4:-22898476 | None:intergenic |
| TACTTTGTGCAAAATTTGGT+GGG | 0.508343 | 4.4:+22895823 | MS.gene32190:CDS |
| AGAGAACTTGCTGATGTAAT+CGG | 0.508494 | 4.4:+22898413 | MS.gene32190:CDS |
| CAGCGTTACCATTCCTCACA+AGG | 0.511040 | 4.4:+22897328 | MS.gene32190:intron |
| GACCTGATACAAAAGTATAT+GGG | 0.520334 | 4.4:+22895943 | MS.gene32190:CDS |
| AAGTGCCTTCCCAGCACCAC+CGG | 0.523362 | 4.4:-22897775 | None:intergenic |
| CGAGGTTGATCCAGTGGCTA+AGG | 0.524038 | 4.4:+22897373 | MS.gene32190:CDS |
| TGATGAAACACCTGTTTCAA+AGG | 0.525212 | 4.4:+22898532 | MS.gene32190:CDS |
| GGCTGCCTCCTTGTGAGGAA+TGG | 0.525797 | 4.4:-22897336 | None:intergenic |
| CCCTATAATGGGCGAAACCA+TGG | 0.526376 | 4.4:+22894165 | None:intergenic |
| GATAATTACCATCCAGAGGA+TGG | 0.527848 | 4.4:+22898464 | MS.gene32190:CDS |
| GTAATCAGCTTCTAATTCCA+TGG | 0.529914 | 4.4:-22894520 | None:intergenic |
| GCAGGTAAACATAATGATAG+TGG | 0.530409 | 4.4:+22897705 | MS.gene32190:intron |
| CCCATAACAAGTCCAATGAA+TGG | 0.531677 | 4.4:-22895777 | None:intergenic |
| ATACTTTGTGCAAAATTTGG+TGG | 0.532307 | 4.4:+22895822 | MS.gene32190:CDS |
| GGCTATAACACAGATTATGT+TGG | 0.533071 | 4.4:+22897558 | MS.gene32190:CDS |
| GGTGATTTACTGTGACTGAC+AGG | 0.533856 | 4.4:-22895978 | None:intergenic |
| TCAGGGGTAGTTTCAGCTCC+AGG | 0.533902 | 4.4:+22895870 | MS.gene32190:CDS |
| TAACCAAATACCTTAGCCAC+TGG | 0.534581 | 4.4:-22897383 | None:intergenic |
| GCTTATGGTGCAAAAGAGAA+AGG | 0.544146 | 4.4:+22897798 | MS.gene32190:CDS |
| TGGACTTGTTATGGGCGACA+GGG | 0.557078 | 4.4:+22895785 | MS.gene32190:CDS |
| AAGTATTAAGATCTTGAGAA+GGG | 0.559004 | 4.4:-22894273 | None:intergenic |
| CCAATCAACTTCCCATCTGT+TGG | 0.559134 | 4.4:-22897537 | None:intergenic |
| AGCCACTATTGTAACAGGAC+TGG | 0.563539 | 4.4:+22899361 | MS.gene32190:CDS |
| AAAGTATTAAGATCTTGAGA+AGG | 0.564924 | 4.4:-22894274 | None:intergenic |
| TGGGAAGGTGGTATGTATGA+AGG | 0.566893 | 4.4:+22894462 | MS.gene32190:CDS |
| CTTAGGCCCAAATGGGAAGG+TGG | 0.569446 | 4.4:+22894450 | MS.gene32190:intron |
| TTTCTTAGGCCCAAATGGGA+AGG | 0.578981 | 4.4:+22894447 | MS.gene32190:intron |
| GTGAGATGAAACAATGACCT+TGG | 0.579371 | 4.4:-22895023 | None:intergenic |
| GGATGCATTACGGTTAGCCA+TGG | 0.582710 | 4.4:+22894503 | MS.gene32190:CDS |
| CAGTTCTATGACTCTATACG+TGG | 0.583679 | 4.4:+22894983 | MS.gene32190:CDS |
| GAATCATACCATCCTCTGGA+TGG | 0.586059 | 4.4:-22898472 | None:intergenic |
| TTAAGGGCTGCCTCCTTGTG+AGG | 0.596708 | 4.4:-22897341 | None:intergenic |
| TAAGCTGTTTGTTGTTATTG+GGG | 0.607370 | 4.4:+22897752 | MS.gene32190:CDS |
| TTGCAAGAATACAAGCAACT+GGG | 0.609562 | 4.4:+22895089 | MS.gene32190:CDS |
| AAAGATTGCAACGACTGCCG+TGG | 0.610819 | 4.4:+22895123 | MS.gene32190:CDS |
| AGGTGATGAAAATCAACGCT+TGG | 0.611331 | 4.4:+22894482 | MS.gene32190:CDS |
| TTGTAAGAAGACCAACAGAT+GGG | 0.614700 | 4.4:+22897526 | MS.gene32190:CDS |
| TTGCTTGTATTCTTGCAACA+AGG | 0.615931 | 4.4:-22895084 | None:intergenic |
| GTAATTATCTAAATCACTGA+GGG | 0.622651 | 4.4:-22898450 | None:intergenic |
| GGACTTGTTATGGGCGACAG+GGG | 0.630222 | 4.4:+22895786 | MS.gene32190:CDS |
| TTTGTTGTTATTGGGGCCGG+TGG | 0.632690 | 4.4:+22897759 | MS.gene32190:CDS |
| TTTAGATAATTACCATCCAG+AGG | 0.639923 | 4.4:+22898460 | MS.gene32190:CDS |
| GAACTTGCTGATGTAATCGG+TGG | 0.640214 | 4.4:+22898416 | MS.gene32190:CDS |
| AGCCCTTAAGTGTTGTGACG+AGG | 0.641813 | 4.4:+22897355 | MS.gene32190:CDS |
| TTGCCAAGATCGTCAACTGA+CGG | 0.643556 | 4.4:-22895061 | None:intergenic |
| AACCTGTAAGTGAACAAGAA+CGG | 0.648571 | 4.4:-22894319 | None:intergenic |
| TGCAACAGATCCTTAAGTGT+AGG | 0.648739 | 4.4:-22895897 | None:intergenic |
| GTTGTAAGAAGACCAACAGA+TGG | 0.654788 | 4.4:+22897525 | MS.gene32190:CDS |
| AATGAAGCTTACCATAGGTG+CGG | 0.656843 | 4.4:-22897842 | None:intergenic |
| TTGTGACGAGGTTGATCCAG+TGG | 0.677946 | 4.4:+22897367 | MS.gene32190:CDS |
| TGCCGTGGAGATCACTGATG+TGG | 0.678999 | 4.4:+22895138 | MS.gene32190:CDS |
| GTGCAAAAGAGAAAGGAGCA+AGG | 0.686151 | 4.4:+22897805 | MS.gene32190:CDS |
| GGTAATTATCTAAATCACTG+AGG | 0.690501 | 4.4:-22898451 | None:intergenic |
| TGCAAGAATACAAGCAACTG+GGG | 0.691736 | 4.4:+22895090 | MS.gene32190:CDS |
| TGGAGATCACTGATGTGGCG+CGG | 0.694129 | 4.4:+22895143 | MS.gene32190:CDS |
| AGTTCTATGACTCTATACGT+GGG | 0.697337 | 4.4:+22894984 | MS.gene32190:CDS |
| GCTATTGAGGATGGGCTACG+AGG | 0.705976 | 4.4:+22897591 | MS.gene32190:CDS |
| CGCCACATCAGTGATCTCCA+CGG | 0.712453 | 4.4:-22895140 | None:intergenic |
| GAAGACATACAATAAAACCA+AGG | 0.715388 | 4.4:+22895006 | MS.gene32190:CDS |
| CGTTACCATTCCTCACAAGG+AGG | 0.724770 | 4.4:+22897331 | MS.gene32190:CDS |
| AATCTAATCGAATTTCGACA+AGG | 0.737741 | 4.4:-22894234 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACACTTTTATTAAAAAAT+AGG | + | chr4.4:22896660-22896679 | MS.gene32190:intron | 10.0% |
| !! | AAAATTACTAGGAAAAAAAA+AGG | - | chr4.4:22896448-22896467 | None:intergenic | 15.0% |
| !! | ATATCATATATATAACTGTT+AGG | - | chr4.4:22896918-22896937 | None:intergenic | 15.0% |
| !!! | AAATTGTTTTACATTTTCTT+AGG | + | chr4.4:22894433-22894452 | MS.gene32190:intron | 15.0% |
| !!! | AATTTTAACATAACTATTGT+TGG | + | chr4.4:22895742-22895761 | MS.gene32190:intron | 15.0% |
| !!! | ATCCTTTTTTTTTAAAAACT+CGG | - | chr4.4:22896753-22896772 | None:intergenic | 15.0% |
| !!! | CTTTTAATTTATTAAATGGA+TGG | + | chr4.4:22897973-22897992 | MS.gene32190:intron | 15.0% |
| !!! | GAATTATGTATTCTAATTTT+TGG | + | chr4.4:22896147-22896166 | MS.gene32190:intron | 15.0% |
| !!! | GTCAAATATTGTTTTTATTA+GGG | + | chr4.4:22899180-22899199 | MS.gene32190:intron | 15.0% |
| !!! | TATGTAAGAATATTTTATAG+TGG | + | chr4.4:22898861-22898880 | MS.gene32190:intron | 15.0% |
| !!! | TGTCAAATATTGTTTTTATT+AGG | + | chr4.4:22899179-22899198 | MS.gene32190:intron | 15.0% |
| !!! | TTTTTTTCCTAGTAATTTTA+TGG | + | chr4.4:22896449-22896468 | MS.gene32190:intron | 15.0% |
| !! | AAAATATTGCATGATCATAA+TGG | + | chr4.4:22895301-22895320 | MS.gene32190:intron | 20.0% |
| !! | AAACTAACCATAAAATTACT+AGG | - | chr4.4:22896459-22896478 | None:intergenic | 20.0% |
| !! | AAATTTATACTTACTGTTGT+AGG | + | chr4.4:22897637-22897656 | MS.gene32190:intron | 20.0% |
| !! | AATAAGTTAGGAAGTTAATT+TGG | - | chr4.4:22896880-22896899 | None:intergenic | 20.0% |
| !! | ACTATGATTGTGTATTTATT+TGG | + | chr4.4:22899005-22899024 | MS.gene32190:intron | 20.0% |
| !! | ATACAAAAAGCTAAACTTAA+TGG | + | chr4.4:22894205-22894224 | MS.gene32190:CDS | 20.0% |
| !! | ATCGTGATAAAATAACAAAA+AGG | - | chr4.4:22894687-22894706 | None:intergenic | 20.0% |
| !! | CATAAATATTTCAAACCAAA+AGG | - | chr4.4:22898982-22899001 | None:intergenic | 20.0% |
| !! | TAATTCAAACAATCTTCATA+AGG | - | chr4.4:22896133-22896152 | None:intergenic | 20.0% |
| !! | TCTTAAATAAGAAAAGGTTT+CGG | + | chr4.4:22898152-22898171 | MS.gene32190:intron | 20.0% |
| !! | TGATATCGCTATAATTTATT+TGG | + | chr4.4:22896932-22896951 | MS.gene32190:intron | 20.0% |
| !! | TGCTTACAGATTAAATTATA+TGG | + | chr4.4:22898887-22898906 | MS.gene32190:intron | 20.0% |
| !! | TTCACAATATTTCAAAACAT+AGG | + | chr4.4:22896377-22896396 | MS.gene32190:intron | 20.0% |
| !!! | AGCTAAAACTTTTTAAACAA+TGG | - | chr4.4:22894853-22894872 | None:intergenic | 20.0% |
| !!! | AGTTTATGTATTTTTATTGG+TGG | + | chr4.4:22896043-22896062 | MS.gene32190:CDS | 20.0% |
| !!! | ATCCGAGTTTTTAAAAAAAA+AGG | + | chr4.4:22896748-22896767 | MS.gene32190:intron | 20.0% |
| !!! | TAATGAAGATGTTATTTGAT+TGG | - | chr4.4:22894577-22894596 | None:intergenic | 20.0% |
| !!! | TCTTAGTTTTGAATTTTGAT+TGG | - | chr4.4:22896718-22896737 | None:intergenic | 20.0% |
| !!! | TGGAGTTTATGTATTTTTAT+TGG | + | chr4.4:22896040-22896059 | MS.gene32190:CDS | 20.0% |
| !!! | TGTTATTTTATCACGATTTA+TGG | + | chr4.4:22894690-22894709 | MS.gene32190:intron | 20.0% |
| !!! | TTAAAGAATGAGTATTTTGA+TGG | - | chr4.4:22899071-22899090 | None:intergenic | 20.0% |
| !!! | TTATGCTACAAATCTTATTT+GGG | + | chr4.4:22896246-22896265 | MS.gene32190:intron | 20.0% |
| ! | AAAAGAAGTTGAATTGCAAA+AGG | + | chr4.4:22897889-22897908 | MS.gene32190:intron | 25.0% |
| ! | AAAGAATACATAATCTTGGT+AGG | + | chr4.4:22896422-22896441 | MS.gene32190:intron | 25.0% |
| ! | AAATTTAATAGACTATGCCA+TGG | + | chr4.4:22899454-22899473 | MS.gene32190:intron | 25.0% |
| ! | AAGAAAGACAAGAGTTTAAA+AGG | - | chr4.4:22897176-22897195 | None:intergenic | 25.0% |
| ! | AAGTATTAAGATCTTGAGAA+GGG | - | chr4.4:22894276-22894295 | None:intergenic | 25.0% |
| ! | AATATCACAATATGCTATGT+TGG | + | chr4.4:22898745-22898764 | MS.gene32190:intron | 25.0% |
| ! | AATCTTTAATATTTCCTGCT+AGG | + | chr4.4:22896548-22896567 | MS.gene32190:intron | 25.0% |
| ! | AATGTTAATAAGCAAAAGGA+TGG | - | chr4.4:22898128-22898147 | None:intergenic | 25.0% |
| ! | AATTTACGATTACTGCATTA+AGG | + | chr4.4:22895699-22895718 | MS.gene32190:intron | 25.0% |
| ! | ACCATTTATATAAGCTTACT+CGG | + | chr4.4:22894621-22894640 | MS.gene32190:intron | 25.0% |
| ! | AGAACTCTTCAGAAATATTA+TGG | + | chr4.4:22899592-22899611 | MS.gene32190:CDS | 25.0% |
| ! | ATAAAAATCTGCAATAGGTT+TGG | + | chr4.4:22895556-22895575 | MS.gene32190:intron | 25.0% |
| ! | ATCAACAAATATGTTTGACA+AGG | - | chr4.4:22898359-22898378 | None:intergenic | 25.0% |
| ! | ATGTGTATAGATGAAGATAA+AGG | + | chr4.4:22895417-22895436 | MS.gene32190:intron | 25.0% |
| ! | ATTTACGATTACTGCATTAA+GGG | + | chr4.4:22895700-22895719 | MS.gene32190:intron | 25.0% |
| ! | CAAAATACTCATTCTTTAAG+TGG | + | chr4.4:22899072-22899091 | MS.gene32190:intron | 25.0% |
| ! | CAAGAGTTTAAAAGGATAAT+AGG | - | chr4.4:22897168-22897187 | None:intergenic | 25.0% |
| ! | CAATGTATGTTCAATAATGT+TGG | + | chr4.4:22897424-22897443 | MS.gene32190:intron | 25.0% |
| ! | CTTACAAACATGACTTATTA+AGG | + | chr4.4:22896519-22896538 | MS.gene32190:intron | 25.0% |
| ! | GTCAAATAAAAATCTGCAAT+AGG | + | chr4.4:22895551-22895570 | MS.gene32190:intron | 25.0% |
| ! | GTTATGCTACAAATCTTATT+TGG | + | chr4.4:22896245-22896264 | MS.gene32190:intron | 25.0% |
| ! | TATAGCTGATTATATTTGTC+TGG | + | chr4.4:22895667-22895686 | MS.gene32190:intron | 25.0% |
| ! | TATGGTTATGTTATGGTAAA+TGG | + | chr4.4:22896188-22896207 | MS.gene32190:intron | 25.0% |
| ! | TCCAAAAGAATACATAATCT+TGG | + | chr4.4:22896418-22896437 | MS.gene32190:intron | 25.0% |
| ! | TCTTTCATAATTCTTCGAAT+TGG | + | chr4.4:22897473-22897492 | MS.gene32190:intron | 25.0% |
| ! | TGAGTAAGTCCTTAAAAAAT+TGG | - | chr4.4:22896078-22896097 | None:intergenic | 25.0% |
| ! | TGTGTATAGATGAAGATAAA+GGG | + | chr4.4:22895418-22895437 | MS.gene32190:intron | 25.0% |
| ! | TGTTATGGTAAATGGTATTA+TGG | + | chr4.4:22896196-22896215 | MS.gene32190:intron | 25.0% |
| ! | TGTTTCAAAACATCATATGT+TGG | + | chr4.4:22897926-22897945 | MS.gene32190:intron | 25.0% |
| ! | TTCCTCTCTTAAATAAGAAA+AGG | + | chr4.4:22898146-22898165 | MS.gene32190:intron | 25.0% |
| ! | TTCTACCACATATTTATGTT+TGG | + | chr4.4:22899124-22899143 | MS.gene32190:intron | 25.0% |
| ! | TTTGAACACACAAATGTATA+AGG | - | chr4.4:22895284-22895303 | None:intergenic | 25.0% |
| !! | AAAGTATTAAGATCTTGAGA+AGG | - | chr4.4:22894277-22894296 | None:intergenic | 25.0% |
| !! | AAATAACAAAAAGGCGTATT+TGG | - | chr4.4:22894678-22894697 | None:intergenic | 25.0% |
| !! | ACATTCTCCCTTATATTTTA+CGG | + | chr4.4:22895247-22895266 | MS.gene32190:intron | 25.0% |
| !! | ACCAAGATTATGTATTCTTT+TGG | - | chr4.4:22896422-22896441 | None:intergenic | 25.0% |
| !! | TCAAAGGTATGCTATTTATA+TGG | + | chr4.4:22898548-22898567 | MS.gene32190:intron | 25.0% |
| !! | TTGATTTCTAGACAAGTTAA+AGG | - | chr4.4:22894801-22894820 | None:intergenic | 25.0% |
| !!! | AACCTTTTCTTATTTAAGAG+AGG | - | chr4.4:22898151-22898170 | None:intergenic | 25.0% |
| !!! | AATTCAACTTCTTTTAACTC+TGG | - | chr4.4:22897884-22897903 | None:intergenic | 25.0% |
| !!! | AGTTTTGAATTTTGATTGGT+TGG | - | chr4.4:22896714-22896733 | None:intergenic | 25.0% |
| !!! | ATAATGGTAAAAGTACTTCA+AGG | + | chr4.4:22895317-22895336 | MS.gene32190:intron | 25.0% |
| !!! | ATATTTCTGAAGAGTTCTTT+TGG | - | chr4.4:22899590-22899609 | None:intergenic | 25.0% |
| !!! | ATGATCTTGCCAATTTTTTA+AGG | + | chr4.4:22896066-22896085 | MS.gene32190:CDS | 25.0% |
| !!! | ATTCAACTTCTTTTAACTCT+GGG | - | chr4.4:22897883-22897902 | None:intergenic | 25.0% |
| !!! | GATTTTTATTTGACGTGTAA+CGG | - | chr4.4:22895545-22895564 | None:intergenic | 25.0% |
| !!! | TAATAAAAGTGTTTTTCCCT+TGG | - | chr4.4:22896654-22896673 | None:intergenic | 25.0% |
| !!! | TCATAGTCTTTTGAAATCAA+GGG | + | chr4.4:22897010-22897029 | MS.gene32190:intron | 25.0% |
| !!! | TTAACTTGTCTAGAAATCAA+AGG | + | chr4.4:22894801-22894820 | MS.gene32190:intron | 25.0% |
| !!! | TTCATAGTCTTTTGAAATCA+AGG | + | chr4.4:22897009-22897028 | MS.gene32190:intron | 25.0% |
| !!! | TTGATTTTTCTAGTGAAGAT+TGG | + | chr4.4:22898647-22898666 | MS.gene32190:intron | 25.0% |
| !!! | TTTTTAAAAACTCGGATCTT+TGG | - | chr4.4:22896745-22896764 | None:intergenic | 25.0% |
| AAGGCTTCATTGAACAATAT+GGG | - | chr4.4:22896002-22896021 | None:intergenic | 30.0% | |
| AATCTAATCGAATTTCGACA+AGG | - | chr4.4:22894237-22894256 | None:intergenic | 30.0% | |
| AATGTTTCTTGTACACCTTT+AGG | - | chr4.4:22897044-22897063 | None:intergenic | 30.0% | |
| ACCGAGTAAGCTTATATAAA+TGG | - | chr4.4:22894625-22894644 | None:intergenic | 30.0% | |
| AGAAATGCTAAATGCCAAAT+CGG | - | chr4.4:22894752-22894771 | None:intergenic | 30.0% | |
| AGGATGATATTCATAAAAGC+AGG | - | chr4.4:22897148-22897167 | None:intergenic | 30.0% | |
| ATACTTTGTGCAAAATTTGG+TGG | + | chr4.4:22895822-22895841 | MS.gene32190:CDS | 30.0% | |
| ATCAAAACCAATTGTCTTGA+AGG | - | chr4.4:22896021-22896040 | None:intergenic | 30.0% | |
| ATGTTTCTTGTACACCTTTA+GGG | - | chr4.4:22897043-22897062 | None:intergenic | 30.0% | |
| CAAAATTCTGCTAAGGAAAT+GGG | - | chr4.4:22898918-22898937 | None:intergenic | 30.0% | |
| CAATTGCCAAAATTGTTTGT+CGG | - | chr4.4:22898326-22898345 | None:intergenic | 30.0% | |
| CGTATACTTTGTGCAAAATT+TGG | + | chr4.4:22895819-22895838 | MS.gene32190:CDS | 30.0% | |
| CTATACAATTTCAGACAACT+TGG | + | chr4.4:22895921-22895940 | MS.gene32190:CDS | 30.0% | |
| CTTATAATGAAGCTTACCAT+AGG | - | chr4.4:22897850-22897869 | None:intergenic | 30.0% | |
| GAAAAAAAATAGAGCTCCTT+GGG | - | chr4.4:22897126-22897145 | None:intergenic | 30.0% | |
| GAAGACATACAATAAAACCA+AGG | + | chr4.4:22895006-22895025 | MS.gene32190:CDS | 30.0% | |
| GAGGAATGTTAATAAGCAAA+AGG | - | chr4.4:22898132-22898151 | None:intergenic | 30.0% | |
| GATACTTGTGAAGATATTCT+AGG | - | chr4.4:22898814-22898833 | None:intergenic | 30.0% | |
| TAACTATTGTTGGAAATTCC+AGG | + | chr4.4:22895752-22895771 | MS.gene32190:intron | 30.0% | |
| TACTTTGTGCAAAATTTGGT+GGG | + | chr4.4:22895823-22895842 | MS.gene32190:CDS | 30.0% | |
| TCTACAAGAGAAACATACAA+AGG | + | chr4.4:22896823-22896842 | MS.gene32190:intron | 30.0% | |
| TGAACAAAATGCCATAAACT+TGG | + | chr4.4:22899045-22899064 | MS.gene32190:intron | 30.0% | |
| TGTCTTGTATGGTTATGTTA+TGG | + | chr4.4:22896181-22896200 | MS.gene32190:intron | 30.0% | |
| TTACATTGACGTTGAACTTA+AGG | + | chr4.4:22894539-22894558 | MS.gene32190:CDS | 30.0% | |
| TTATGCACTCAGTTATTGTT+AGG | + | chr4.4:22896611-22896630 | MS.gene32190:intron | 30.0% | |
| TTATTCAGTTCATTGTCACA+TGG | + | chr4.4:22898219-22898238 | MS.gene32190:intron | 30.0% | |
| TTGGCATTTAGCATTTCTTT+AGG | + | chr4.4:22894754-22894773 | MS.gene32190:intron | 30.0% | |
| TTTACGATTACTGCATTAAG+GGG | + | chr4.4:22895701-22895720 | MS.gene32190:intron | 30.0% | |
| TTTGTATGTTTCTCTTGTAG+AGG | - | chr4.4:22896824-22896843 | None:intergenic | 30.0% | |
| ! | ACAAAAGTATATGGGATTGT+TGG | + | chr4.4:22895951-22895970 | MS.gene32190:CDS | 30.0% |
| ! | ATCAGCTATCATTTTATCCA+TGG | - | chr4.4:22894185-22894204 | None:intergenic | 30.0% |
| ! | ATCCCATATACTTTTGTATC+AGG | - | chr4.4:22895948-22895967 | None:intergenic | 30.0% |
| ! | CATATTGCTTTAAATGGTAC+AGG | - | chr4.4:22895487-22895506 | None:intergenic | 30.0% |
| ! | CATCAGCATATTGCTTTAAA+TGG | - | chr4.4:22895493-22895512 | None:intergenic | 30.0% |
| ! | CATTTAAAGCAATATGCTGA+TGG | + | chr4.4:22895491-22895510 | MS.gene32190:intron | 30.0% |
| ! | CTATAGTAATGCTGTTTGAA+GGG | - | chr4.4:22895652-22895671 | None:intergenic | 30.0% |
| ! | GACCTGATACAAAAGTATAT+GGG | + | chr4.4:22895943-22895962 | MS.gene32190:CDS | 30.0% |
| ! | GTGTCATGATGTGATTTTAT+TGG | - | chr4.4:22898773-22898792 | None:intergenic | 30.0% |
| ! | TACTCATCAACAGATTTTGT+GGG | + | chr4.4:22896092-22896111 | MS.gene32190:CDS | 30.0% |
| ! | TGCATTGAAATTTTACTCGT+TGG | + | chr4.4:22899277-22899296 | MS.gene32190:CDS | 30.0% |
| ! | TGTGTACATCAATTGTTTCT+TGG | + | chr4.4:22897683-22897702 | MS.gene32190:intron | 30.0% |
| ! | TTACTCATCAACAGATTTTG+TGG | + | chr4.4:22896091-22896110 | MS.gene32190:CDS | 30.0% |
| ! | TTTGAAGTCTGCAATTTCTA+AGG | + | chr4.4:22896481-22896500 | MS.gene32190:intron | 30.0% |
| !! | AAATAGCATACCTTTGAAAC+AGG | - | chr4.4:22898545-22898564 | None:intergenic | 30.0% |
| !! | CAATCGTTTTTGTTATGTGT+TGG | + | chr4.4:22897256-22897275 | MS.gene32190:intron | 30.0% |
| !! | GTAAGCTGTTTGTTGTTATT+GGG | + | chr4.4:22897751-22897770 | MS.gene32190:CDS | 30.0% |
| !! | TAAGCTGTTTGTTGTTATTG+GGG | + | chr4.4:22897752-22897771 | MS.gene32190:CDS | 30.0% |
| !! | TTCAACTTCTTTTAACTCTG+GGG | - | chr4.4:22897882-22897901 | None:intergenic | 30.0% |
| !! | TTCAAGAGTCTAGTCATTTT+TGG | - | chr4.4:22899323-22899342 | None:intergenic | 30.0% |
| !! | TTGTAATGACTTGTACCTTT+TGG | + | chr4.4:22898964-22898983 | MS.gene32190:intron | 30.0% |
| !!! | TATTTTGATGGCCAAGTTTA+TGG | - | chr4.4:22899059-22899078 | None:intergenic | 30.0% |
| !!! | TTCAAGACAATTGGTTTTGA+TGG | + | chr4.4:22896020-22896039 | MS.gene32190:CDS | 30.0% |
| AAAGTACAAACCACTGAAAC+AGG | - | chr4.4:22899505-22899524 | None:intergenic | 35.0% | |
| AAATTCCAGGTTCCATTCAT+TGG | + | chr4.4:22895765-22895784 | MS.gene32190:intron | 35.0% | |
| AACCTGTAAGTGAACAAGAA+CGG | - | chr4.4:22894322-22894341 | None:intergenic | 35.0% | |
| AACTGTTAGGAGTTAGAACA+GGG | - | chr4.4:22896905-22896924 | None:intergenic | 35.0% | |
| AAGACACGTATGTTTGATAG+TGG | + | chr4.4:22895195-22895214 | MS.gene32190:intron | 35.0% | |
| AAGGAGATAATGTGCAACAA+AGG | - | chr4.4:22897200-22897219 | None:intergenic | 35.0% | |
| AAGTACAAACCACTGAAACA+GGG | - | chr4.4:22899504-22899523 | None:intergenic | 35.0% | |
| AATAAAGACTTCCATTCCCT+TGG | - | chr4.4:22896792-22896811 | None:intergenic | 35.0% | |
| AATATGTTTGACAAGGAGAG+CGG | - | chr4.4:22898352-22898371 | None:intergenic | 35.0% | |
| AATCGGAAAATCCTATAGCA+TGG | - | chr4.4:22894735-22894754 | None:intergenic | 35.0% | |
| AATGAAGCCTTCAAGACAAT+TGG | + | chr4.4:22896011-22896030 | MS.gene32190:CDS | 35.0% | |
| AATGATGATTTCCAAGGGAA+TGG | + | chr4.4:22896778-22896797 | MS.gene32190:intron | 35.0% | |
| ACAGCACACCGTAAAATATA+AGG | - | chr4.4:22895258-22895277 | None:intergenic | 35.0% | |
| ACAGGCCAAACATAAATATG+TGG | - | chr4.4:22899132-22899151 | None:intergenic | 35.0% | |
| ACATATTTATGTTTGGCCTG+TGG | + | chr4.4:22899131-22899150 | MS.gene32190:intron | 35.0% | |
| ACTCATTCTTTAAGTGGAAG+TGG | + | chr4.4:22899078-22899097 | MS.gene32190:intron | 35.0% | |
| AGAAGTAATTAGTTCCCTGA+AGG | - | chr4.4:22899242-22899261 | None:intergenic | 35.0% | |
| AGAGATCTGAACAGTGAAAA+AGG | - | chr4.4:22897219-22897238 | None:intergenic | 35.0% | |
| AGTTCTATGACTCTATACGT+GGG | + | chr4.4:22894984-22895003 | MS.gene32190:CDS | 35.0% | |
| ATCTACTGCATATCCATTTG+TGG | + | chr4.4:22896305-22896324 | MS.gene32190:intron | 35.0% | |
| ATCTTCATGAGATGCTTTCT+TGG | + | chr4.4:22898001-22898020 | MS.gene32190:intron | 35.0% | |
| ATGCCAATGATGATTTCCAA+GGG | + | chr4.4:22896773-22896792 | MS.gene32190:intron | 35.0% | |
| ATGGCTGTACTAAACCAATT+AGG | + | chr4.4:22898567-22898586 | MS.gene32190:intron | 35.0% | |
| ATTCCCTTGGAAATCATCAT+TGG | - | chr4.4:22896779-22896798 | None:intergenic | 35.0% | |
| ATTGATAGACAGCTAAGTTG+AGG | + | chr4.4:22895366-22895385 | MS.gene32190:intron | 35.0% | |
| ATTGTTAGGAACCCAAGAAT+TGG | + | chr4.4:22896625-22896644 | MS.gene32190:intron | 35.0% | |
| CAAATGTGCTAACATGAGTT+TGG | - | chr4.4:22898198-22898217 | None:intergenic | 35.0% | |
| CAGCACACCGTAAAATATAA+GGG | - | chr4.4:22895257-22895276 | None:intergenic | 35.0% | |
| CATTTCTTGCATGTCTTGTA+TGG | + | chr4.4:22896170-22896189 | MS.gene32190:intron | 35.0% | |
| CCAAAATTCTGCTAAGGAAA+TGG | - | chr4.4:22898919-22898938 | None:intergenic | 35.0% | |
| CCACTAACAATAATAGCACA+AGG | - | chr4.4:22898594-22898613 | None:intergenic | 35.0% | |
| CGACAATATGAGCATTATAC+TGG | + | chr4.4:22899407-22899426 | MS.gene32190:CDS | 35.0% | |
| CTAGCAAACACAACTTCAAT+CGG | + | chr4.4:22898494-22898513 | MS.gene32190:CDS | 35.0% | |
| GAAGGCTTCATTGAACAATA+TGG | - | chr4.4:22896003-22896022 | None:intergenic | 35.0% | |
| GAATTGCAAAAGGTTATTCC+AGG | + | chr4.4:22897899-22897918 | MS.gene32190:intron | 35.0% | |
| GAATTGGTTACACAGTCAAT+AGG | + | chr4.4:22897489-22897508 | MS.gene32190:intron | 35.0% | |
| GCAAAAGATGAAACATGAAC+AGG | - | chr4.4:22898087-22898106 | None:intergenic | 35.0% | |
| GCAGGTAAACATAATGATAG+TGG | + | chr4.4:22897705-22897724 | MS.gene32190:intron | 35.0% | |
| GGAAAAAAAATAGAGCTCCT+TGG | - | chr4.4:22897127-22897146 | None:intergenic | 35.0% | |
| GGCTATAACACAGATTATGT+TGG | + | chr4.4:22897558-22897577 | MS.gene32190:CDS | 35.0% | |
| GGTGTACAAGAAACATTAAG+CGG | + | chr4.4:22897047-22897066 | MS.gene32190:intron | 35.0% | |
| GTAATCAGCTTCTAATTCCA+TGG | - | chr4.4:22894523-22894542 | None:intergenic | 35.0% | |
| TAACTGTTAGGAGTTAGAAC+AGG | - | chr4.4:22896906-22896925 | None:intergenic | 35.0% | |
| TAGAACAGGGAGAATAAGTT+AGG | - | chr4.4:22896892-22896911 | None:intergenic | 35.0% | |
| TATGCCAATGATGATTTCCA+AGG | + | chr4.4:22896772-22896791 | MS.gene32190:intron | 35.0% | |
| TCTTCATGAGATGCTTTCTT+GGG | + | chr4.4:22898002-22898021 | MS.gene32190:intron | 35.0% | |
| TGATGAAACACCTGTTTCAA+AGG | + | chr4.4:22898532-22898551 | MS.gene32190:CDS | 35.0% | |
| TGCATTTGCTTACATTGCAT+TGG | - | chr4.4:22895445-22895464 | None:intergenic | 35.0% | |
| TGGCTGTACTAAACCAATTA+GGG | + | chr4.4:22898568-22898587 | MS.gene32190:intron | 35.0% | |
| TTGAAAGAAGCAGAAGAATC+TGG | + | chr4.4:22899338-22899357 | MS.gene32190:CDS | 35.0% | |
| TTGCAAGAATACAAGCAACT+GGG | + | chr4.4:22895089-22895108 | MS.gene32190:CDS | 35.0% | |
| TTGCTTGTATTCTTGCAACA+AGG | - | chr4.4:22895087-22895106 | None:intergenic | 35.0% | |
| TTGTAAGAAGACCAACAGAT+GGG | + | chr4.4:22897526-22897545 | MS.gene32190:CDS | 35.0% | |
| ! | AAAAGGATGGTAATGCATAC+AGG | - | chr4.4:22898115-22898134 | None:intergenic | 35.0% |
| ! | AAAGGATGGTAATGCATACA+GGG | - | chr4.4:22898114-22898133 | None:intergenic | 35.0% |
| ! | AAAGTACTTCAAGGTTGGTT+AGG | + | chr4.4:22895326-22895345 | MS.gene32190:intron | 35.0% |
| ! | ACAGGTGTTTCATCAACTTT+TGG | - | chr4.4:22898527-22898546 | None:intergenic | 35.0% |
| ! | ACATTTTCTTAGGCCCAAAT+GGG | + | chr4.4:22894443-22894462 | MS.gene32190:intron | 35.0% |
| ! | CCATTTCCTTAGCAGAATTT+TGG | + | chr4.4:22898916-22898935 | MS.gene32190:intron | 35.0% |
| ! | CCTTGTGCTATTATTGTTAG+TGG | + | chr4.4:22898591-22898610 | MS.gene32190:intron | 35.0% |
| ! | GCTATAGTAATGCTGTTTGA+AGG | - | chr4.4:22895653-22895672 | None:intergenic | 35.0% |
| ! | GCTTTTCCGACAAACAATTT+TGG | + | chr4.4:22898317-22898336 | MS.gene32190:intron | 35.0% |
| ! | GGACCTGATACAAAAGTATA+TGG | + | chr4.4:22895942-22895961 | MS.gene32190:CDS | 35.0% |
| ! | TACATCAATTGTTTCTTGGC+AGG | + | chr4.4:22897687-22897706 | MS.gene32190:intron | 35.0% |
| ! | TACATTTTCTTAGGCCCAAA+TGG | + | chr4.4:22894442-22894461 | MS.gene32190:intron | 35.0% |
| ! | TAGCTGTCATTTGATAAAGC+TGG | + | chr4.4:22894868-22894887 | MS.gene32190:intron | 35.0% |
| ! | TGCTATAGGATTTTCCGATT+TGG | + | chr4.4:22894735-22894754 | MS.gene32190:intron | 35.0% |
| ! | TGTTGGTCTACTAAGTGTTT+AGG | + | chr4.4:22896343-22896362 | MS.gene32190:intron | 35.0% |
| ! | TTATATTTTACGGTGTGCTG+TGG | + | chr4.4:22895257-22895276 | MS.gene32190:intron | 35.0% |
| ! | TTCTAGGAACCAACTTAACA+CGG | - | chr4.4:22898798-22898817 | None:intergenic | 35.0% |
| !! | AGAGAACTTGCTGATGTAAT+CGG | + | chr4.4:22898413-22898432 | MS.gene32190:CDS | 35.0% |
| !! | CCATTCATTGGACTTGTTAT+GGG | + | chr4.4:22895777-22895796 | MS.gene32190:CDS | 35.0% |
| !! | CTATTTCTGCTATTGAGGAT+GGG | + | chr4.4:22897583-22897602 | MS.gene32190:CDS | 35.0% |
| !! | GGTAAGCTGTTTGTTGTTAT+TGG | + | chr4.4:22897750-22897769 | MS.gene32190:CDS | 35.0% |
| !! | TCCATTCATTGGACTTGTTA+TGG | + | chr4.4:22895776-22895795 | MS.gene32190:CDS | 35.0% |
| !! | TGGTAAAAGTACTTCAAGGT+TGG | + | chr4.4:22895321-22895340 | MS.gene32190:intron | 35.0% |
| !! | TTCCTTAGCAGAATTTTGGT+TGG | + | chr4.4:22898920-22898939 | MS.gene32190:intron | 35.0% |
| !! | TTTGGTGGGTATCTTACTTT+TGG | + | chr4.4:22895837-22895856 | MS.gene32190:CDS | 35.0% |
| !!! | CTTTTGAAATCAAGGGATCT+GGG | + | chr4.4:22897017-22897036 | MS.gene32190:intron | 35.0% |
| !!! | GAATTTTGATTGGTTGGTGT+AGG | - | chr4.4:22896708-22896727 | None:intergenic | 35.0% |
| !!! | GATGTTTTGAAACAAGATCC+TGG | - | chr4.4:22897920-22897939 | None:intergenic | 35.0% |
| !!! | TCCTTAGCAGAATTTTGGTT+GGG | + | chr4.4:22898921-22898940 | MS.gene32190:intron | 35.0% |
| !!! | TCTTTTGAAATCAAGGGATC+TGG | + | chr4.4:22897016-22897035 | MS.gene32190:intron | 35.0% |
| !!! | TGGTAGAAGTGCTTTTGTTT+GGG | - | chr4.4:22899112-22899131 | None:intergenic | 35.0% |
| !!! | TTTTTTACTGTCAGCTTACC+TGG | - | chr4.4:22899437-22899456 | None:intergenic | 35.0% |
| AAACAGGGACAACGAAATCA+GGG | - | chr4.4:22899489-22899508 | None:intergenic | 40.0% | |
| AACCCAAGAATTGGATTCCA+AGG | + | chr4.4:22896634-22896653 | MS.gene32190:intron | 40.0% | |
| AACCTCGTCACAACACTTAA+GGG | - | chr4.4:22897360-22897379 | None:intergenic | 40.0% | |
| AATGAAGCTTACCATAGGTG+CGG | - | chr4.4:22897845-22897864 | None:intergenic | 40.0% | |
| ACAAACAGCTTACCAGCTAA+TGG | - | chr4.4:22897744-22897763 | None:intergenic | 40.0% | |
| ACAGGACTGGAGATGTTTAT+TGG | + | chr4.4:22899374-22899393 | MS.gene32190:CDS | 40.0% | |
| ACCCAAGAATTGGATTCCAA+GGG | + | chr4.4:22896635-22896654 | MS.gene32190:intron | 40.0% | |
| AGGTGATGAAAATCAACGCT+TGG | + | chr4.4:22894482-22894501 | MS.gene32190:CDS | 40.0% | |
| ATACATACCACCTTCCCATT+TGG | - | chr4.4:22894460-22894479 | None:intergenic | 40.0% | |
| ATCAACGCTTGGATGCATTA+CGG | + | chr4.4:22894493-22894512 | MS.gene32190:CDS | 40.0% | |
| CAATCTTTGCACCATGCTAT+AGG | + | chr4.4:22894721-22894740 | MS.gene32190:intron | 40.0% | |
| CAGTTCTATGACTCTATACG+TGG | + | chr4.4:22894983-22895002 | MS.gene32190:CDS | 40.0% | |
| CCCATAACAAGTCCAATGAA+TGG | - | chr4.4:22895780-22895799 | None:intergenic | 40.0% | |
| CTATGATGAGATGCAATTGC+TGG | + | chr4.4:22898833-22898852 | MS.gene32190:intron | 40.0% | |
| GAGGTAGTTGTTGTATCTAG+TGG | + | chr4.4:22897610-22897629 | MS.gene32190:intron | 40.0% | |
| GAGTGTATGAGGCTTGAAAT+TGG | - | chr4.4:22895626-22895645 | None:intergenic | 40.0% | |
| GATGTACACAACAACATCTC+AGG | - | chr4.4:22897673-22897692 | None:intergenic | 40.0% | |
| GATTACATCAGCAAGTTCTC+TGG | - | chr4.4:22898414-22898433 | None:intergenic | 40.0% | |
| GCTTATGGTGCAAAAGAGAA+AGG | + | chr4.4:22897798-22897817 | MS.gene32190:CDS | 40.0% | |
| GGCTTGGGTTATTGAAATGT+TGG | + | chr4.4:22896326-22896345 | MS.gene32190:intron | 40.0% | |
| GTGAGATGAAACAATGACCT+TGG | - | chr4.4:22895026-22895045 | None:intergenic | 40.0% | |
| GTTGCAAGAATACAAGCAAC+TGG | + | chr4.4:22895088-22895107 | MS.gene32190:CDS | 40.0% | |
| GTTGTAAGAAGACCAACAGA+TGG | + | chr4.4:22897525-22897544 | MS.gene32190:CDS | 40.0% | |
| TAACCAAATACCTTAGCCAC+TGG | - | chr4.4:22897386-22897405 | None:intergenic | 40.0% | |
| TAATAGCACAAGGCCCTAAT+TGG | - | chr4.4:22898584-22898603 | None:intergenic | 40.0% | |
| TACATACCACCTTCCCATTT+GGG | - | chr4.4:22894459-22894478 | None:intergenic | 40.0% | |
| TAGAACTGATGAGCAACCTT+TGG | - | chr4.4:22894971-22894990 | None:intergenic | 40.0% | |
| TCAAACTCTAGTTGTGTGAG+AGG | - | chr4.4:22897291-22897310 | None:intergenic | 40.0% | |
| TCAATAACCCAAGCCACAAA+TGG | - | chr4.4:22896321-22896340 | None:intergenic | 40.0% | |
| TCCCAACCAAAATTCTGCTA+AGG | - | chr4.4:22898925-22898944 | None:intergenic | 40.0% | |
| TCCCTTGGAATCCAATTCTT+GGG | - | chr4.4:22896639-22896658 | None:intergenic | 40.0% | |
| TGCAACAGATCCTTAAGTGT+AGG | - | chr4.4:22895900-22895919 | None:intergenic | 40.0% | |
| TGCAAGAATACAAGCAACTG+GGG | + | chr4.4:22895090-22895109 | MS.gene32190:CDS | 40.0% | |
| TGCATATCCATTTGTGGCTT+GGG | + | chr4.4:22896311-22896330 | MS.gene32190:intron | 40.0% | |
| TGTGGCGTTTCTATTCTAGA+TGG | + | chr4.4:22899149-22899168 | MS.gene32190:intron | 40.0% | |
| TGTTTGTCGGAAAAGCCATA+TGG | - | chr4.4:22898313-22898332 | None:intergenic | 40.0% | |
| TTCCCTTGGAATCCAATTCT+TGG | - | chr4.4:22896640-22896659 | None:intergenic | 40.0% | |
| TTCTTTAAGTGGAAGTGGAG+CGG | + | chr4.4:22899083-22899102 | MS.gene32190:intron | 40.0% | |
| TTGAAGGGAATGAGTGTATG+AGG | - | chr4.4:22895637-22895656 | None:intergenic | 40.0% | |
| ! | AAGGATGGTAATGCATACAG+GGG | - | chr4.4:22898113-22898132 | None:intergenic | 40.0% |
| ! | AGACTATGCCATGGACTTTT+TGG | + | chr4.4:22899463-22899482 | MS.gene32190:intron | 40.0% |
| ! | ATCTAGAATAGAAACGCCAC+AGG | - | chr4.4:22899150-22899169 | None:intergenic | 40.0% |
| ! | ATGAGAGTAAGTTGACCTTC+AGG | + | chr4.4:22899224-22899243 | MS.gene32190:intron | 40.0% |
| ! | ATGAGCAACCTTTGGAGATA+TGG | - | chr4.4:22894963-22894982 | None:intergenic | 40.0% |
| ! | CAACAGATTTTGTGGGATTC+AGG | + | chr4.4:22896099-22896118 | MS.gene32190:CDS | 40.0% |
| ! | GTTTGCTAATGAGCTATGTG+TGG | + | chr4.4:22896268-22896287 | MS.gene32190:intron | 40.0% |
| ! | TGAGAGTAAGTTGACCTTCA+GGG | + | chr4.4:22899225-22899244 | MS.gene32190:intron | 40.0% |
| ! | TTCTTTAGGAACTCATCTGC+TGG | + | chr4.4:22894768-22894787 | MS.gene32190:intron | 40.0% |
| !! | AAACATAGGAAGTGCTGTCA+AGG | + | chr4.4:22896391-22896410 | MS.gene32190:intron | 40.0% |
| !! | AACTTCTTTTAACTCTGGGG+AGG | - | chr4.4:22897879-22897898 | None:intergenic | 40.0% |
| !! | GCTATTTCTGCTATTGAGGA+TGG | + | chr4.4:22897582-22897601 | MS.gene32190:CDS | 40.0% |
| !! | TGGTGCTATTTCTGCTATTG+AGG | + | chr4.4:22897578-22897597 | MS.gene32190:CDS | 40.0% |
| !!! | GTGGTAGAAGTGCTTTTGTT+TGG | - | chr4.4:22899113-22899132 | None:intergenic | 40.0% |
| AACCCTTGCTTAAATGCCCA+AGG | + | chr4.4:22897107-22897126 | MS.gene32190:intron | 45.0% | |
| AACTACAATCGATGCCTAGC+AGG | - | chr4.4:22896565-22896584 | None:intergenic | 45.0% | |
| AATCAGGGCCAAAAAGTCCA+TGG | - | chr4.4:22899474-22899493 | None:intergenic | 45.0% | |
| AGCCACTATTGTAACAGGAC+TGG | + | chr4.4:22899361-22899380 | MS.gene32190:CDS | 45.0% | |
| ATGACACCACCGTGTTAAGT+TGG | + | chr4.4:22898786-22898805 | MS.gene32190:intron | 45.0% | |
| CAACCTCGTCACAACACTTA+AGG | - | chr4.4:22897361-22897380 | None:intergenic | 45.0% | |
| CAAGTCCAATGAATGGAACC+TGG | - | chr4.4:22895773-22895792 | None:intergenic | 45.0% | |
| CCAATCAACTTCCCATCTGT+TGG | - | chr4.4:22897540-22897559 | None:intergenic | 45.0% | |
| CTCCAGTCCTGTTACAATAG+TGG | - | chr4.4:22899366-22899385 | None:intergenic | 45.0% | |
| CTCCTTGGGCATTTAAGCAA+GGG | - | chr4.4:22897112-22897131 | None:intergenic | 45.0% | |
| CTGCATATCCATTTGTGGCT+TGG | + | chr4.4:22896310-22896329 | MS.gene32190:intron | 45.0% | |
| GAAACAGGGACAACGAAATC+AGG | - | chr4.4:22899490-22899509 | None:intergenic | 45.0% | |
| GAATCATACCATCCTCTGGA+TGG | - | chr4.4:22898475-22898494 | None:intergenic | 45.0% | |
| GAGCATTATACTGGATTGCC+AGG | + | chr4.4:22899416-22899435 | MS.gene32190:CDS | 45.0% | |
| GCTAGAATCATACCATCCTC+TGG | - | chr4.4:22898479-22898498 | None:intergenic | 45.0% | |
| GGCGCGGATGTTTCAAATTA+TGG | + | chr4.4:22895159-22895178 | MS.gene32190:CDS | 45.0% | |
| GGTGATTTACTGTGACTGAC+AGG | - | chr4.4:22895981-22896000 | None:intergenic | 45.0% | |
| GTGCAAAAGAGAAAGGAGCA+AGG | + | chr4.4:22897805-22897824 | MS.gene32190:CDS | 45.0% | |
| TAGGAACCAACTTAACACGG+TGG | - | chr4.4:22898795-22898814 | None:intergenic | 45.0% | |
| TCAGCGTTGCATTCACCATA+TGG | + | chr4.4:22898295-22898314 | MS.gene32190:intron | 45.0% | |
| TCCAGGTCAACCTACACTTA+AGG | + | chr4.4:22895887-22895906 | MS.gene32190:CDS | 45.0% | |
| TGCCGTTCTTGTTCACTTAC+AGG | + | chr4.4:22894317-22894336 | MS.gene32190:CDS | 45.0% | |
| TGGGAAGGTGGTATGTATGA+AGG | + | chr4.4:22894462-22894481 | MS.gene32190:CDS | 45.0% | |
| TGTTCCTGCCATATCTCCAA+AGG | + | chr4.4:22894952-22894971 | MS.gene32190:intron | 45.0% | |
| TTGCCAAGATCGTCAACTGA+CGG | - | chr4.4:22895064-22895083 | None:intergenic | 45.0% | |
| TTTCGTTGTCCCTGTTTCAG+TGG | + | chr4.4:22899492-22899511 | MS.gene32190:intron | 45.0% | |
| TTTCTTAGGCCCAAATGGGA+AGG | + | chr4.4:22894447-22894466 | MS.gene32190:intron | 45.0% | |
| TTTGGAGATATGGCAGGAAC+AGG | - | chr4.4:22894953-22894972 | None:intergenic | 45.0% | |
| ! | ACAGCTAAGTTGAGGAAGAG+AGG | + | chr4.4:22895374-22895393 | MS.gene32190:intron | 45.0% |
| ! | ACTTTTGGTACACTCGAGTC+AGG | + | chr4.4:22895852-22895871 | MS.gene32190:CDS | 45.0% |
| ! | AGCAATATGCTGATGGTGCT+AGG | + | chr4.4:22895498-22895517 | MS.gene32190:intron | 45.0% |
| ! | AGGATGGTAATGCATACAGG+GGG | - | chr4.4:22898112-22898131 | None:intergenic | 45.0% |
| ! | CCAACAGATGGGAAGTTGAT+TGG | + | chr4.4:22897537-22897556 | MS.gene32190:CDS | 45.0% |
| ! | CTTTTGGTACACTCGAGTCA+GGG | + | chr4.4:22895853-22895872 | MS.gene32190:CDS | 45.0% |
| ! | GAATGCAACGCTGATTGAAG+CGG | - | chr4.4:22898289-22898308 | None:intergenic | 45.0% |
| ! | GATCCAGTGGCTAAGGTATT+TGG | + | chr4.4:22897380-22897399 | MS.gene32190:intron | 45.0% |
| ! | TCCTTAAGTGTAGGTTGACC+TGG | - | chr4.4:22895891-22895910 | None:intergenic | 45.0% |
| ! | TCTGGAGCCACTATTGTAAC+AGG | + | chr4.4:22899356-22899375 | MS.gene32190:CDS | 45.0% |
| ! | TTTTGGTACACTCGAGTCAG+GGG | + | chr4.4:22895854-22895873 | MS.gene32190:CDS | 45.0% |
| !! | CTGTTTGTTGTTATTGGGGC+CGG | + | chr4.4:22897756-22897775 | MS.gene32190:CDS | 45.0% |
| !! | GAACTTGCTGATGTAATCGG+TGG | + | chr4.4:22898416-22898435 | MS.gene32190:CDS | 45.0% |
| !! | TGCTAGGCATCGATTGTAGT+TGG | + | chr4.4:22896564-22896583 | MS.gene32190:intron | 45.0% |
| !!! | AATTCTTTTAATTTATTAAA+TGG | + | chr4.4:22897969-22897988 | MS.gene32190:intron | 5.0% |
| AAAGATTGCAACGACTGCCG+TGG | + | chr4.4:22895123-22895142 | MS.gene32190:CDS | 50.0% | |
| ACTCCGTCAGTTGACGATCT+TGG | + | chr4.4:22895058-22895077 | MS.gene32190:CDS | 50.0% | |
| CAGCGTTACCATTCCTCACA+AGG | + | chr4.4:22897328-22897347 | MS.gene32190:intron | 50.0% | |
| CGTTACCATTCCTCACAAGG+AGG | + | chr4.4:22897331-22897350 | MS.gene32190:CDS | 50.0% | |
| GCTCCTTGGGCATTTAAGCA+AGG | - | chr4.4:22897113-22897132 | None:intergenic | 50.0% | |
| GTGATTGCAAACCGCACCTA+TGG | + | chr4.4:22897831-22897850 | MS.gene32190:CDS | 50.0% | |
| ! | ACAGCTGTTTCGCCATTAGC+TGG | + | chr4.4:22897729-22897748 | MS.gene32190:CDS | 50.0% |
| ! | AGCCCTTAAGTGTTGTGACG+AGG | + | chr4.4:22897355-22897374 | MS.gene32190:CDS | 50.0% |
| ! | GCAACCTTTGGAGATATGGC+AGG | - | chr4.4:22894959-22894978 | None:intergenic | 50.0% |
| ! | GGATGCATTACGGTTAGCCA+TGG | + | chr4.4:22894503-22894522 | MS.gene32190:CDS | 50.0% |
| ! | TTGTGACGAGGTTGATCCAG+TGG | + | chr4.4:22897367-22897386 | MS.gene32190:CDS | 50.0% |
| !! | TGGACTTGTTATGGGCGACA+GGG | + | chr4.4:22895785-22895804 | MS.gene32190:CDS | 50.0% |
| !! | TTGGACTTGTTATGGGCGAC+AGG | + | chr4.4:22895784-22895803 | MS.gene32190:CDS | 50.0% |
| !! | TTTGTTGTTATTGGGGCCGG+TGG | + | chr4.4:22897759-22897778 | MS.gene32190:CDS | 50.0% |
| CGCCACATCAGTGATCTCCA+CGG | - | chr4.4:22895143-22895162 | None:intergenic | 55.0% | |
| CTTAGGCCCAAATGGGAAGG+TGG | + | chr4.4:22894450-22894469 | MS.gene32190:intron | 55.0% | |
| TCAAGGGATCTGGGCCCTAA+AGG | + | chr4.4:22897026-22897045 | MS.gene32190:intron | 55.0% | |
| TCAGGGGTAGTTTCAGCTCC+AGG | + | chr4.4:22895870-22895889 | MS.gene32190:CDS | 55.0% | |
| TGCCGTGGAGATCACTGATG+TGG | + | chr4.4:22895138-22895157 | MS.gene32190:CDS | 55.0% | |
| TGGAGATCACTGATGTGGCG+CGG | + | chr4.4:22895143-22895162 | MS.gene32190:CDS | 55.0% | |
| TTAAGGGCTGCCTCCTTGTG+AGG | - | chr4.4:22897344-22897363 | None:intergenic | 55.0% | |
| ! | CGAGGTTGATCCAGTGGCTA+AGG | + | chr4.4:22897373-22897392 | MS.gene32190:CDS | 55.0% |
| !! | GCTATTGAGGATGGGCTACG+AGG | + | chr4.4:22897591-22897610 | MS.gene32190:CDS | 55.0% |
| !! | GCTGGGAAGGCACTTGCTTA+TGG | + | chr4.4:22897783-22897802 | MS.gene32190:CDS | 55.0% |
| !! | GGACTTGTTATGGGCGACAG+GGG | + | chr4.4:22895786-22895805 | MS.gene32190:CDS | 55.0% |
| AAGTGCCTTCCCAGCACCAC+CGG | - | chr4.4:22897778-22897797 | None:intergenic | 60.0% | |
| GGCTGCCTCCTTGTGAGGAA+TGG | - | chr4.4:22897339-22897358 | None:intergenic | 60.0% | |
| TTATTGGGGCCGGTGGTGCT+GGG | + | chr4.4:22897766-22897785 | MS.gene32190:CDS | 60.0% | |
| GTTATTGGGGCCGGTGGTGC+TGG | + | chr4.4:22897765-22897784 | MS.gene32190:CDS | 65.0% | |
| ! | TGGGGCCGGTGGTGCTGGGA+AGG | + | chr4.4:22897770-22897789 | MS.gene32190:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22894172 | 22899625 | 22894172 | ID=MS.gene32190 |
| chr4.4 | mRNA | 22894172 | 22899625 | 22894172 | ID=MS.gene32190.t1;Parent=MS.gene32190 |
| chr4.4 | exon | 22894172 | 22894338 | 22894172 | ID=MS.gene32190.t1.exon1;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22894172 | 22894338 | 22894172 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22894455 | 22894560 | 22894455 | ID=MS.gene32190.t1.exon2;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22894455 | 22894560 | 22894455 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22894974 | 22895192 | 22894974 | ID=MS.gene32190.t1.exon3;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22894974 | 22895192 | 22894974 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22895774 | 22896120 | 22895774 | ID=MS.gene32190.t1.exon4;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22895774 | 22896120 | 22895774 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22897331 | 22897394 | 22897331 | ID=MS.gene32190.t1.exon5;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22897331 | 22897394 | 22897331 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22897504 | 22897612 | 22897504 | ID=MS.gene32190.t1.exon6;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22897504 | 22897612 | 22897504 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22897709 | 22897852 | 22897709 | ID=MS.gene32190.t1.exon7;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22897709 | 22897852 | 22897709 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22898405 | 22898553 | 22898405 | ID=MS.gene32190.t1.exon8;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22898405 | 22898553 | 22898405 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22899275 | 22899437 | 22899275 | ID=MS.gene32190.t1.exon9;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22899275 | 22899437 | 22899275 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| chr4.4 | exon | 22899585 | 22899625 | 22899585 | ID=MS.gene32190.t1.exon10;Parent=MS.gene32190.t1 |
| chr4.4 | CDS | 22899585 | 22899625 | 22899585 | ID=cds.MS.gene32190.t1;Parent=MS.gene32190.t1 |
| Gene Sequence |
| Protein sequence |
