Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052540.t1 | XP_024637216.1 | 97.4 | 498 | 13 | 0 | 4 | 501 | 2 | 499 | 9.50E-280 | 972.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052540.t1 | Q9SQT8 | 72.3 | 501 | 136 | 2 | 3 | 501 | 91 | 590 | 1.4e-207 | 723.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052540.t1 | I3T8Z3 | 97.2 | 501 | 11 | 1 | 4 | 501 | 2 | 502 | 1.2e-279 | 971.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052540 | MS.gene23184 | 0.805069 | 1.59E-49 | -1.69E-46 |
| MS.gene052540 | MS.gene23185 | 0.801758 | 7.74E-49 | -1.69E-46 |
| MS.gene052540 | MS.gene23404 | 0.801119 | 1.05E-48 | -1.69E-46 |
| MS.gene052540 | MS.gene26260 | 0.821971 | 3.04E-53 | -1.69E-46 |
| MS.gene052540 | MS.gene32190 | 0.915124 | 8.54E-85 | -1.69E-46 |
| MS.gene052540 | MS.gene33738 | 0.867621 | 1.20E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052540.t1 | MTR_4g090620 | 91.218 | 501 | 30 | 2 | 4 | 504 | 2 | 488 | 0.0 | 897 |
| MS.gene052540.t1 | MTR_7g114190 | 37.278 | 338 | 161 | 6 | 113 | 447 | 5 | 294 | 1.33e-63 | 210 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052540.t1 | AT3G06350 | 72.112 | 502 | 137 | 2 | 3 | 502 | 91 | 591 | 0.0 | 707 |
Find 123 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCGTTCTTGTTCACTTAC+AGG | 0.158590 | 4.3:+23195799 | MS.gene052540:CDS |
| CGTATACTTTGTGCAAAATT+TGG | 0.173415 | 4.3:+23197297 | MS.gene052540:CDS |
| GTTATTGGGGCCGGTGGTGC+TGG | 0.178808 | 4.3:+23199243 | MS.gene052540:CDS |
| GTTAATCTGCGTCCCTATAA+TGG | 0.202016 | 4.3:+23195635 | MS.gene052540:CDS |
| GGTAAGCTGTTTGTTGTTAT+TGG | 0.204026 | 4.3:+23199228 | MS.gene052540:CDS |
| GTAAGCTGTTTGTTGTTATT+GGG | 0.209152 | 4.3:+23199229 | MS.gene052540:CDS |
| GGACCTGATACAAAAGTATA+TGG | 0.246424 | 4.3:+23197420 | MS.gene052540:CDS |
| ACAGGACTGGAGATGTTTAT+TGG | 0.265366 | 4.3:+23200860 | MS.gene052540:CDS |
| TCCATTCATTGGACTTGTTA+TGG | 0.267088 | 4.3:+23197254 | MS.gene052540:CDS |
| GAAGGCTTCATTGAACAATA+TGG | 0.271186 | 4.3:-23197478 | None:intergenic |
| GGCGCGGATGTTTCAAATTA+TGG | 0.276023 | 4.3:+23196637 | MS.gene052540:CDS |
| CCATGGTTTCGCCCATTATA+GGG | 0.298605 | 4.3:-23195647 | None:intergenic |
| ATCAAAACCAATTGTCTTGA+AGG | 0.319919 | 4.3:-23197496 | None:intergenic |
| TTTGGTGGGTATCTTACTTT+TGG | 0.321545 | 4.3:+23197315 | MS.gene052540:CDS |
| TCCATGGTTTCGCCCATTAT+AGG | 0.329672 | 4.3:-23195648 | None:intergenic |
| AAATTCCAGGTTCCATTCAT+TGG | 0.330251 | 4.3:+23197243 | MS.gene052540:intron |
| AAAGTACAAACCACTGAAAC+AGG | 0.330814 | 4.3:-23200973 | None:intergenic |
| ACAGGTGTTTCATCAACTTT+TGG | 0.331032 | 4.3:-23200003 | None:intergenic |
| GCTGGGAAGGCACTTGCTTA+TGG | 0.344432 | 4.3:+23199261 | MS.gene052540:CDS |
| TACATACCACCTTCCCATTT+GGG | 0.345206 | 4.3:-23195934 | None:intergenic |
| TTACATTGACGTTGAACTTA+AGG | 0.345605 | 4.3:+23196017 | MS.gene052540:CDS |
| CCATTCATTGGACTTGTTAT+GGG | 0.346230 | 4.3:+23197255 | MS.gene052540:CDS |
| ATACATACCACCTTCCCATT+TGG | 0.350326 | 4.3:-23195935 | None:intergenic |
| CGACAATATGAGCATTATAC+TGG | 0.370012 | 4.3:+23200893 | MS.gene052540:CDS |
| GAAACAGGGACAACGAAATC+AGG | 0.376823 | 4.3:-23200958 | None:intergenic |
| TTGAAAGAAGCAGAAGAATC+TGG | 0.381681 | 4.3:+23200824 | MS.gene052540:CDS |
| TTAATCTGCGTCCCTATAAT+GGG | 0.387976 | 4.3:+23195636 | MS.gene052540:CDS |
| AATGAAGCCTTCAAGACAAT+TGG | 0.388263 | 4.3:+23197489 | MS.gene052540:CDS |
| TTATTGGGGCCGGTGGTGCT+GGG | 0.401637 | 4.3:+23199244 | MS.gene052540:CDS |
| CAACCTCGTCACAACACTTA+AGG | 0.412513 | 4.3:-23198836 | None:intergenic |
| ACAAAAGTATATGGGATTGT+TGG | 0.413162 | 4.3:+23197429 | MS.gene052540:CDS |
| TCTGGAGCCACTATTGTAAC+AGG | 0.414913 | 4.3:+23200842 | MS.gene052540:CDS |
| GTTGCAAGAATACAAGCAAC+TGG | 0.416406 | 4.3:+23196566 | MS.gene052540:CDS |
| GCTATTTCTGCTATTGAGGA+TGG | 0.424228 | 4.3:+23199060 | MS.gene052540:CDS |
| GAATTGGTTACACAGTCAAT+AGG | 0.430150 | 4.3:+23198967 | MS.gene052540:intron |
| AACCTCGTCACAACACTTAA+GGG | 0.433794 | 4.3:-23198835 | None:intergenic |
| AAATAGCATACCTTTGAAAC+AGG | 0.438226 | 4.3:-23200021 | None:intergenic |
| CTATACAATTTCAGACAACT+TGG | 0.439985 | 4.3:+23197399 | MS.gene052540:CDS |
| TGGGGCCGGTGGTGCTGGGA+AGG | 0.445473 | 4.3:+23199248 | MS.gene052540:CDS |
| CCAACAGATGGGAAGTTGAT+TGG | 0.446923 | 4.3:+23199015 | MS.gene052540:CDS |
| AAGGCTTCATTGAACAATAT+GGG | 0.447559 | 4.3:-23197477 | None:intergenic |
| TTGGACTTGTTATGGGCGAC+AGG | 0.448844 | 4.3:+23197262 | MS.gene052540:CDS |
| ATCAACGCTTGGATGCATTA+CGG | 0.453875 | 4.3:+23195971 | MS.gene052540:CDS |
| TGGTGCTATTTCTGCTATTG+AGG | 0.455359 | 4.3:+23199056 | MS.gene052540:CDS |
| GATTACATCAGCAAGTTCTC+TGG | 0.463591 | 4.3:-23199890 | None:intergenic |
| CTAGCAAACACAACTTCAAT+CGG | 0.472513 | 4.3:+23199973 | MS.gene052540:CDS |
| GAGCATTATACTGGATTGCC+AGG | 0.481705 | 4.3:+23200902 | MS.gene052540:CDS |
| ACAAACAGCTTACCAGCTAA+TGG | 0.483108 | 4.3:-23199219 | None:intergenic |
| ACAGCTGTTTCGCCATTAGC+TGG | 0.484838 | 4.3:+23199207 | MS.gene052540:CDS |
| CTCCAGTCCTGTTACAATAG+TGG | 0.488995 | 4.3:-23200849 | None:intergenic |
| TCCAGGTCAACCTACACTTA+AGG | 0.491107 | 4.3:+23197365 | MS.gene052540:CDS |
| CTGTTTGTTGTTATTGGGGC+CGG | 0.492358 | 4.3:+23199234 | MS.gene052540:CDS |
| CTATTTCTGCTATTGAGGAT+GGG | 0.499559 | 4.3:+23199061 | MS.gene052540:CDS |
| GTGATTGCAAACCGCACCTA+TGG | 0.499726 | 4.3:+23199309 | MS.gene052540:CDS |
| TCCTTAAGTGTAGGTTGACC+TGG | 0.501004 | 4.3:-23197366 | None:intergenic |
| GCTAGAATCATACCATCCTC+TGG | 0.504787 | 4.3:-23199955 | None:intergenic |
| TACTTTGTGCAAAATTTGGT+GGG | 0.508343 | 4.3:+23197301 | MS.gene052540:CDS |
| AGAGAACTTGCTGATGTAAT+CGG | 0.508494 | 4.3:+23199892 | MS.gene052540:CDS |
| CAGCGTTACCATTCCTCACA+AGG | 0.511040 | 4.3:+23198806 | MS.gene052540:intron |
| GCATAGTCTATCAGCTTACC+TGG | 0.519119 | 4.3:-23200920 | None:intergenic |
| GACCTGATACAAAAGTATAT+GGG | 0.520334 | 4.3:+23197421 | MS.gene052540:CDS |
| AAGTGCCTTCCCAGCACCAC+CGG | 0.523362 | 4.3:-23199253 | None:intergenic |
| CGAGGTTGATCCAGTGGCTA+AGG | 0.524038 | 4.3:+23198851 | MS.gene052540:CDS |
| TGATGAAACACCTGTTTCAA+AGG | 0.525212 | 4.3:+23200011 | MS.gene052540:CDS |
| GGCTGCCTCCTTGTGAGGAA+TGG | 0.525797 | 4.3:-23198814 | None:intergenic |
| CCCTATAATGGGCGAAACCA+TGG | 0.526376 | 4.3:+23195647 | MS.gene052540:CDS |
| GATAATTACCATCCAGAGGA+TGG | 0.527848 | 4.3:+23199943 | MS.gene052540:CDS |
| GTAATCAGCTTCTAATTCCA+TGG | 0.529914 | 4.3:-23195998 | None:intergenic |
| GCAGGTAAACATAATGATAG+TGG | 0.530409 | 4.3:+23199183 | MS.gene052540:intron |
| CCCATAACAAGTCCAATGAA+TGG | 0.531677 | 4.3:-23197255 | None:intergenic |
| ATACTTTGTGCAAAATTTGG+TGG | 0.532307 | 4.3:+23197300 | MS.gene052540:CDS |
| GGCTATAACACAGATTATGT+TGG | 0.533071 | 4.3:+23199036 | MS.gene052540:CDS |
| GGTGATTTACTGTGACTGAC+AGG | 0.533856 | 4.3:-23197456 | None:intergenic |
| TCAGGGGTAGTTTCAGCTCC+AGG | 0.533902 | 4.3:+23197348 | MS.gene052540:CDS |
| TAACCAAATACCTTAGCCAC+TGG | 0.534581 | 4.3:-23198861 | None:intergenic |
| GCTTATGGTGCAAAAGAGAA+AGG | 0.544146 | 4.3:+23199276 | MS.gene052540:CDS |
| TGGACTTGTTATGGGCGACA+GGG | 0.557078 | 4.3:+23197263 | MS.gene052540:CDS |
| CCAATCAACTTCCCATCTGT+TGG | 0.559134 | 4.3:-23199015 | None:intergenic |
| AGCCACTATTGTAACAGGAC+TGG | 0.563539 | 4.3:+23200847 | MS.gene052540:CDS |
| TGGGAAGGTGGTATGTATGA+AGG | 0.566893 | 4.3:+23195940 | MS.gene052540:CDS |
| CTTAGGCCCAAATGGGAAGG+TGG | 0.569446 | 4.3:+23195928 | MS.gene052540:intron |
| TTTCTTAGGCCCAAATGGGA+AGG | 0.578981 | 4.3:+23195925 | MS.gene052540:intron |
| GTGAGATGAAACAATGACCT+TGG | 0.579371 | 4.3:-23196501 | None:intergenic |
| TTTCGTTGTCCCTGTTTCAG+TGG | 0.581459 | 4.3:+23200963 | MS.gene052540:CDS |
| GGATGCATTACGGTTAGCCA+TGG | 0.582710 | 4.3:+23195981 | MS.gene052540:CDS |
| GAATCATACCATCCTCTGGA+TGG | 0.586059 | 4.3:-23199951 | None:intergenic |
| GAAAGTGTTAAGATCTTGAG+AGG | 0.586604 | 4.3:-23195757 | None:intergenic |
| TTAAGGGCTGCCTCCTTGTG+AGG | 0.596708 | 4.3:-23198819 | None:intergenic |
| AAACAGGGACAACGAAATCA+GGG | 0.599312 | 4.3:-23200957 | None:intergenic |
| TAAGCTGTTTGTTGTTATTG+GGG | 0.607370 | 4.3:+23199230 | MS.gene052540:CDS |
| TTGCAAGAATACAAGCAACT+GGG | 0.609562 | 4.3:+23196567 | MS.gene052540:CDS |
| AAAGATTGCAACGACTGCCG+TGG | 0.610819 | 4.3:+23196601 | MS.gene052540:CDS |
| AGGTGATGAAAATCAACGCT+TGG | 0.611331 | 4.3:+23195960 | MS.gene052540:CDS |
| TTGTAAGAAGACCAACAGAT+GGG | 0.614700 | 4.3:+23199004 | MS.gene052540:CDS |
| CAGTTCTATGACTCTATACG+CGG | 0.615632 | 4.3:+23196461 | MS.gene052540:CDS |
| TTGCTTGTATTCTTGCAACA+AGG | 0.615931 | 4.3:-23196562 | None:intergenic |
| AAAGTGTTAAGATCTTGAGA+GGG | 0.619192 | 4.3:-23195756 | None:intergenic |
| TAAGCTGATAGACTATGCCA+TGG | 0.619719 | 4.3:+23200925 | MS.gene052540:CDS |
| GTAATTATCTAAATCACTGA+GGG | 0.622651 | 4.3:-23199929 | None:intergenic |
| GGACTTGTTATGGGCGACAG+GGG | 0.630222 | 4.3:+23197264 | MS.gene052540:CDS |
| AACCTGTAAGTGAACAAGAA+CGG | 0.632558 | 4.3:-23195801 | None:intergenic |
| TTTGTTGTTATTGGGGCCGG+TGG | 0.632690 | 4.3:+23199237 | MS.gene052540:CDS |
| TTTAGATAATTACCATCCAG+AGG | 0.639923 | 4.3:+23199939 | MS.gene052540:CDS |
| GAACTTGCTGATGTAATCGG+TGG | 0.640214 | 4.3:+23199895 | MS.gene052540:CDS |
| AGCCCTTAAGTGTTGTGACG+AGG | 0.641813 | 4.3:+23198833 | MS.gene052540:CDS |
| TTGCTAAGATCGTCAACTGA+CGG | 0.645811 | 4.3:-23196539 | None:intergenic |
| AAGTGTTAAGATCTTGAGAG+GGG | 0.646005 | 4.3:-23195755 | None:intergenic |
| TGCAACAGATCCTTAAGTGT+AGG | 0.648739 | 4.3:-23197375 | None:intergenic |
| GTTGTAAGAAGACCAACAGA+TGG | 0.654788 | 4.3:+23199003 | MS.gene052540:CDS |
| AATGAAGCTTACCATAGGTG+CGG | 0.656843 | 4.3:-23199320 | None:intergenic |
| AAGTACAAACCACTGAAACA+GGG | 0.663789 | 4.3:-23200972 | None:intergenic |
| TTGTGACGAGGTTGATCCAG+TGG | 0.677946 | 4.3:+23198845 | MS.gene052540:CDS |
| TGCCGTGGAGATCACTGATG+TGG | 0.678999 | 4.3:+23196616 | MS.gene052540:CDS |
| AGTTCTATGACTCTATACGC+GGG | 0.679296 | 4.3:+23196462 | MS.gene052540:CDS |
| GTGCAAAAGAGAAAGGAGCA+AGG | 0.686151 | 4.3:+23199283 | MS.gene052540:CDS |
| GGTAATTATCTAAATCACTG+AGG | 0.690501 | 4.3:-23199930 | None:intergenic |
| TGCAAGAATACAAGCAACTG+GGG | 0.691736 | 4.3:+23196568 | MS.gene052540:CDS |
| TGGAGATCACTGATGTGGCG+CGG | 0.694129 | 4.3:+23196621 | MS.gene052540:CDS |
| GCTATTGAGGATGGGCTACG+AGG | 0.705976 | 4.3:+23199069 | MS.gene052540:CDS |
| CGCCACATCAGTGATCTCCA+CGG | 0.712453 | 4.3:-23196618 | None:intergenic |
| GAAGACATACAATAAAACCA+AGG | 0.716769 | 4.3:+23196484 | MS.gene052540:CDS |
| CGTTACCATTCCTCACAAGG+AGG | 0.724770 | 4.3:+23198809 | MS.gene052540:CDS |
| AATCTAATCGAATTTCGACA+AGG | 0.737741 | 4.3:-23195716 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACACTTTTATTAAAAAAT+AGG | + | chr4.3:23198138-23198157 | MS.gene052540:intron | 10.0% |
| !!! | TTTTAATTTTATTAAATGGA+TGG | + | chr4.3:23199452-23199471 | MS.gene052540:intron | 10.0% |
| !! | AAAATTACTAGGAAAAAAAA+AGG | - | chr4.3:23197926-23197945 | None:intergenic | 15.0% |
| !! | ATATCATATATATAACTGTT+AGG | - | chr4.3:23198397-23198416 | None:intergenic | 15.0% |
| !!! | AAAATGTTTTACATTTTCTT+AGG | + | chr4.3:23195911-23195930 | MS.gene052540:intron | 15.0% |
| !!! | AATTTTAACATAACTATTGT+TGG | + | chr4.3:23197220-23197239 | MS.gene052540:intron | 15.0% |
| !!! | GAATTATGTATTCTAATTTT+TGG | + | chr4.3:23197625-23197644 | MS.gene052540:intron | 15.0% |
| !!! | GTCAAATATTGTTTTTATTA+GGG | + | chr4.3:23200666-23200685 | MS.gene052540:intron | 15.0% |
| !!! | TCCTTTTTTTTTTAAAAACT+CGG | - | chr4.3:23198231-23198250 | None:intergenic | 15.0% |
| !!! | TGTCAAATATTGTTTTTATT+AGG | + | chr4.3:23200665-23200684 | MS.gene052540:intron | 15.0% |
| !!! | TTTTTTTCCTAGTAATTTTA+TGG | + | chr4.3:23197927-23197946 | MS.gene052540:intron | 15.0% |
| !! | AAAATATTGCATGATCTTAA+TGG | + | chr4.3:23196779-23196798 | MS.gene052540:intron | 20.0% |
| !! | AAACTAACCATAAAATTACT+AGG | - | chr4.3:23197937-23197956 | None:intergenic | 20.0% |
| !! | AAATTTATACTTACTGTTGT+AGG | + | chr4.3:23199115-23199134 | MS.gene052540:intron | 20.0% |
| !! | AATAAGTTAGGAAGTTAATT+TGG | - | chr4.3:23198359-23198378 | None:intergenic | 20.0% |
| !! | ACTATGATTGTGTATTTATT+TGG | + | chr4.3:23200491-23200510 | MS.gene052540:intron | 20.0% |
| !! | ATACAAAAAGCTAAACTTAA+TGG | + | chr4.3:23195687-23195706 | MS.gene052540:CDS | 20.0% |
| !! | ATCGTGATAAAATAACAAAA+AGG | - | chr4.3:23196165-23196184 | None:intergenic | 20.0% |
| !! | CATAAATATTTCAAACCAAA+AGG | - | chr4.3:23200468-23200487 | None:intergenic | 20.0% |
| !! | TAATTCAAACAATCTTCATA+AGG | - | chr4.3:23197611-23197630 | None:intergenic | 20.0% |
| !! | TATAATTTAATCTGTAAGCA+CGG | - | chr4.3:23200373-23200392 | None:intergenic | 20.0% |
| !! | TCTTAAATAAGAAAAGGTTT+CGG | + | chr4.3:23199631-23199650 | MS.gene052540:intron | 20.0% |
| !! | TGATATCGCTATAATTTATT+TGG | + | chr4.3:23198411-23198430 | MS.gene052540:intron | 20.0% |
| !! | TGCTTACAGATTAAATTATA+TGG | + | chr4.3:23200373-23200392 | MS.gene052540:intron | 20.0% |
| !! | TGTTTCAAAATATCATATGT+TGG | + | chr4.3:23199404-23199423 | MS.gene052540:intron | 20.0% |
| !! | TTCACAATATTTCAAAACAT+AGG | + | chr4.3:23197855-23197874 | MS.gene052540:intron | 20.0% |
| !!! | AGCTAAAACTTTTTAAACAA+TGG | - | chr4.3:23196331-23196350 | None:intergenic | 20.0% |
| !!! | AGTTTATGTATTTTTATTGG+TGG | + | chr4.3:23197521-23197540 | MS.gene052540:CDS | 20.0% |
| !!! | ATATTCTCCCTTATATTTTA+CGG | + | chr4.3:23196725-23196744 | MS.gene052540:intron | 20.0% |
| !!! | GATTTTTATTTGACATGTAA+CGG | - | chr4.3:23197023-23197042 | None:intergenic | 20.0% |
| !!! | TAATGAAGATGTTATTTGAT+TGG | - | chr4.3:23196055-23196074 | None:intergenic | 20.0% |
| !!! | TATGTAAGAATATTTTAGAG+TGG | + | chr4.3:23200347-23200366 | MS.gene052540:intron | 20.0% |
| !!! | TCCGAGTTTTTAAAAAAAAA+AGG | + | chr4.3:23198227-23198246 | MS.gene052540:intron | 20.0% |
| !!! | TCTTAGTTTTGAATTTTGAT+TGG | - | chr4.3:23198196-23198215 | None:intergenic | 20.0% |
| !!! | TGGAGTTTATGTATTTTTAT+TGG | + | chr4.3:23197518-23197537 | MS.gene052540:CDS | 20.0% |
| !!! | TGTTATTTTATCACGATTTA+TGG | + | chr4.3:23196168-23196187 | MS.gene052540:intron | 20.0% |
| !!! | TTAAAGAATGAGTATTTTGA+TGG | - | chr4.3:23200557-23200576 | None:intergenic | 20.0% |
| !!! | TTATGCTACAAATCTTATTT+GGG | + | chr4.3:23197724-23197743 | MS.gene052540:intron | 20.0% |
| ! | AAAAGAAGTTGAATTGCAAA+AGG | + | chr4.3:23199367-23199386 | MS.gene052540:intron | 25.0% |
| ! | AAAGAATACATAATCTTGGT+AGG | + | chr4.3:23197900-23197919 | MS.gene052540:intron | 25.0% |
| ! | AAGAAAGACAAGAGTTTAAA+AGG | - | chr4.3:23198654-23198673 | None:intergenic | 25.0% |
| ! | AATCTTTAATATTTCCTGCT+AGG | + | chr4.3:23198026-23198045 | MS.gene052540:intron | 25.0% |
| ! | AATTTACGATTACTGCATTA+AGG | + | chr4.3:23197177-23197196 | MS.gene052540:intron | 25.0% |
| ! | ACAAGAGTTTAAAAGGATAT+AGG | - | chr4.3:23198647-23198666 | None:intergenic | 25.0% |
| ! | ACCATTTATATAAGCTTACT+CGG | + | chr4.3:23196099-23196118 | MS.gene052540:intron | 25.0% |
| ! | ATAAAAATCTGCAATAGGTT+TGG | + | chr4.3:23197034-23197053 | MS.gene052540:intron | 25.0% |
| ! | ATCAACAAATATGTTTGACA+AGG | - | chr4.3:23199838-23199857 | None:intergenic | 25.0% |
| ! | ATGTGTATAGATGAAGATAA+AGG | + | chr4.3:23196895-23196914 | MS.gene052540:intron | 25.0% |
| ! | ATTTACGATTACTGCATTAA+GGG | + | chr4.3:23197178-23197197 | MS.gene052540:intron | 25.0% |
| ! | CAAAATACTCATTCTTTAAG+TGG | + | chr4.3:23200558-23200577 | MS.gene052540:intron | 25.0% |
| ! | CAATGTATGTTCAATAATGT+TGG | + | chr4.3:23198902-23198921 | MS.gene052540:intron | 25.0% |
| ! | GTAATTATCTAAATCACTGA+GGG | - | chr4.3:23199932-23199951 | None:intergenic | 25.0% |
| ! | GTCAAATAAAAATCTGCAAT+AGG | + | chr4.3:23197029-23197048 | MS.gene052540:intron | 25.0% |
| ! | GTTATGCTACAAATCTTATT+TGG | + | chr4.3:23197723-23197742 | MS.gene052540:intron | 25.0% |
| ! | TATAGCTGATTATATTTGTC+TGG | + | chr4.3:23197145-23197164 | MS.gene052540:intron | 25.0% |
| ! | TATGGTTATGTTATGGTAAA+TGG | + | chr4.3:23197666-23197685 | MS.gene052540:intron | 25.0% |
| ! | TCCAAAAGAATACATAATCT+TGG | + | chr4.3:23197896-23197915 | MS.gene052540:intron | 25.0% |
| ! | TCTTTCATAATTCTTCGAAT+TGG | + | chr4.3:23198951-23198970 | MS.gene052540:intron | 25.0% |
| ! | TGAGTAAGTCCTTAAAAAAT+TGG | - | chr4.3:23197556-23197575 | None:intergenic | 25.0% |
| ! | TGTGTATAGATGAAGATAAA+GGG | + | chr4.3:23196896-23196915 | MS.gene052540:intron | 25.0% |
| ! | TGTTATGGTAAATGGTATTA+TGG | + | chr4.3:23197674-23197693 | MS.gene052540:intron | 25.0% |
| ! | TTCCTCTCTTAAATAAGAAA+AGG | + | chr4.3:23199625-23199644 | MS.gene052540:intron | 25.0% |
| ! | TTCTACCACATATTTATGTT+TGG | + | chr4.3:23200610-23200629 | MS.gene052540:intron | 25.0% |
| ! | TTTGAACACACAAATGTATA+AGG | - | chr4.3:23196762-23196781 | None:intergenic | 25.0% |
| !! | AAATAACAAAAAGGCGTATT+TGG | - | chr4.3:23196156-23196175 | None:intergenic | 25.0% |
| !! | ACCAAGATTATGTATTCTTT+TGG | - | chr4.3:23197900-23197919 | None:intergenic | 25.0% |
| !! | GAGTTTGGAATACAAAATAT+AGG | - | chr4.3:23199662-23199681 | None:intergenic | 25.0% |
| !! | TCAAAGGTATGCTATTTATA+TGG | + | chr4.3:23200027-23200046 | MS.gene052540:intron | 25.0% |
| !! | TTGATTTCTAGACAAGTTAA+AGG | - | chr4.3:23196279-23196298 | None:intergenic | 25.0% |
| !! | TTGTAATGACTTATACCTTT+TGG | + | chr4.3:23200450-23200469 | MS.gene052540:intron | 25.0% |
| !!! | AACCTTTTCTTATTTAAGAG+AGG | - | chr4.3:23199630-23199649 | None:intergenic | 25.0% |
| !!! | AATTCAACTTCTTTTAACTC+TGG | - | chr4.3:23199362-23199381 | None:intergenic | 25.0% |
| !!! | AGTTTTGAATTTTGATTGGT+TGG | - | chr4.3:23198192-23198211 | None:intergenic | 25.0% |
| !!! | ATGATCTTGCCAATTTTTTA+AGG | + | chr4.3:23197544-23197563 | MS.gene052540:CDS | 25.0% |
| !!! | ATTCAACTTCTTTTAACTCT+GGG | - | chr4.3:23199361-23199380 | None:intergenic | 25.0% |
| !!! | TAATAAAAGTGTTTTTCCCT+TGG | - | chr4.3:23198132-23198151 | None:intergenic | 25.0% |
| !!! | TCATAGTCTTTTGAAATCAA+GGG | + | chr4.3:23198489-23198508 | MS.gene052540:intron | 25.0% |
| !!! | TTAACTTGTCTAGAAATCAA+AGG | + | chr4.3:23196279-23196298 | MS.gene052540:intron | 25.0% |
| !!! | TTAATGGTAAAAGTACTTCA+AGG | + | chr4.3:23196795-23196814 | MS.gene052540:intron | 25.0% |
| !!! | TTCATAGTCTTTTGAAATCA+AGG | + | chr4.3:23198488-23198507 | MS.gene052540:intron | 25.0% |
| !!! | TTGATTTTTCTAGTGAAGAT+TGG | + | chr4.3:23200133-23200152 | MS.gene052540:intron | 25.0% |
| !!! | TTTTTAAAAACTCGGATCTT+TGG | - | chr4.3:23198223-23198242 | None:intergenic | 25.0% |
| AAGGCTTCATTGAACAATAT+GGG | - | chr4.3:23197480-23197499 | None:intergenic | 30.0% | |
| AATATCACAATATGCTACGT+TGG | + | chr4.3:23200231-23200250 | MS.gene052540:intron | 30.0% | |
| AATCTAATCGAATTTCGACA+AGG | - | chr4.3:23195719-23195738 | None:intergenic | 30.0% | |
| AATGTTTCTTGTACACCTTT+AGG | - | chr4.3:23198523-23198542 | None:intergenic | 30.0% | |
| ACCGAGTAAGCTTATATAAA+TGG | - | chr4.3:23196103-23196122 | None:intergenic | 30.0% | |
| AGAAATGCTAAATGCCAAAT+CGG | - | chr4.3:23196230-23196249 | None:intergenic | 30.0% | |
| AGGATGATATTCATAAAAGC+AGG | - | chr4.3:23198627-23198646 | None:intergenic | 30.0% | |
| ATACTTTGTGCAAAATTTGG+TGG | + | chr4.3:23197300-23197319 | MS.gene052540:CDS | 30.0% | |
| ATCAAAACCAATTGTCTTGA+AGG | - | chr4.3:23197499-23197518 | None:intergenic | 30.0% | |
| ATGTTTCTTGTACACCTTTA+GGG | - | chr4.3:23198522-23198541 | None:intergenic | 30.0% | |
| CAAAATTCTGCTAAGGAAAT+GGG | - | chr4.3:23200404-23200423 | None:intergenic | 30.0% | |
| CAATTGCCAAAATTGTTTGT+CGG | - | chr4.3:23199805-23199824 | None:intergenic | 30.0% | |
| CGTATACTTTGTGCAAAATT+TGG | + | chr4.3:23197297-23197316 | MS.gene052540:CDS | 30.0% | |
| CTATACAATTTCAGACAACT+TGG | + | chr4.3:23197399-23197418 | MS.gene052540:CDS | 30.0% | |
| CTTATAATGAAGCTTACCAT+AGG | - | chr4.3:23199328-23199347 | None:intergenic | 30.0% | |
| GAAAAAAAATAGAGCTCCTT+GGG | - | chr4.3:23198605-23198624 | None:intergenic | 30.0% | |
| GAAGACATACAATAAAACCA+AGG | + | chr4.3:23196484-23196503 | MS.gene052540:CDS | 30.0% | |
| GATACTTGTGAAGATATTCT+AGG | - | chr4.3:23200300-23200319 | None:intergenic | 30.0% | |
| GGTAATTATCTAAATCACTG+AGG | - | chr4.3:23199933-23199952 | None:intergenic | 30.0% | |
| TAACTATTGTTGGAAATTCC+AGG | + | chr4.3:23197230-23197249 | MS.gene052540:intron | 30.0% | |
| TACTTTGTGCAAAATTTGGT+GGG | + | chr4.3:23197301-23197320 | MS.gene052540:CDS | 30.0% | |
| TCTACAAGAGAAACATACAA+AGG | + | chr4.3:23198302-23198321 | MS.gene052540:intron | 30.0% | |
| TGAACAAAATGCCATAAACT+TGG | + | chr4.3:23200531-23200550 | MS.gene052540:intron | 30.0% | |
| TGTCTTGTATGGTTATGTTA+TGG | + | chr4.3:23197659-23197678 | MS.gene052540:intron | 30.0% | |
| TTACATTGACGTTGAACTTA+AGG | + | chr4.3:23196017-23196036 | MS.gene052540:CDS | 30.0% | |
| TTATGCACTCAGTTATTGTT+AGG | + | chr4.3:23198089-23198108 | MS.gene052540:intron | 30.0% | |
| TTATTCAGTTCATTGTCACA+TGG | + | chr4.3:23199698-23199717 | MS.gene052540:intron | 30.0% | |
| TTGGCATTTAGCATTTCTTT+AGG | + | chr4.3:23196232-23196251 | MS.gene052540:intron | 30.0% | |
| TTTACGATTACTGCATTAAG+GGG | + | chr4.3:23197179-23197198 | MS.gene052540:intron | 30.0% | |
| TTTAGATAATTACCATCCAG+AGG | + | chr4.3:23199939-23199958 | MS.gene052540:CDS | 30.0% | |
| TTTGTATGTTTCTCTTGTAG+AGG | - | chr4.3:23198303-23198322 | None:intergenic | 30.0% | |
| ! | AAAGTGTTAAGATCTTGAGA+GGG | - | chr4.3:23195759-23195778 | None:intergenic | 30.0% |
| ! | ACAAAAGTATATGGGATTGT+TGG | + | chr4.3:23197429-23197448 | MS.gene052540:CDS | 30.0% |
| ! | ATCAGCTATCATTTTATCCA+TGG | - | chr4.3:23195667-23195686 | None:intergenic | 30.0% |
| ! | ATCCCATATACTTTTGTATC+AGG | - | chr4.3:23197426-23197445 | None:intergenic | 30.0% |
| ! | CATATTGCTTTAAATGGTAC+AGG | - | chr4.3:23196965-23196984 | None:intergenic | 30.0% |
| ! | CATCAGCATATTGCTTTAAA+TGG | - | chr4.3:23196971-23196990 | None:intergenic | 30.0% |
| ! | CATTTAAAGCAATATGCTGA+TGG | + | chr4.3:23196969-23196988 | MS.gene052540:intron | 30.0% |
| ! | CTATAGTAATGCTGTTTGAA+GGG | - | chr4.3:23197130-23197149 | None:intergenic | 30.0% |
| ! | GACCTGATACAAAAGTATAT+GGG | + | chr4.3:23197421-23197440 | MS.gene052540:CDS | 30.0% |
| ! | TACTCATCAACAGATTTTGT+GGG | + | chr4.3:23197570-23197589 | MS.gene052540:CDS | 30.0% |
| ! | TGCATTGAAATTTTACTCGT+TGG | + | chr4.3:23200763-23200782 | MS.gene052540:CDS | 30.0% |
| ! | TGTGTACATCAATTGTTTCT+TGG | + | chr4.3:23199161-23199180 | MS.gene052540:intron | 30.0% |
| ! | TTACTCATCAACAGATTTTG+TGG | + | chr4.3:23197569-23197588 | MS.gene052540:CDS | 30.0% |
| ! | TTTGAAGTCTGCAATTTCTA+AGG | + | chr4.3:23197959-23197978 | MS.gene052540:intron | 30.0% |
| !! | AAATAGCATACCTTTGAAAC+AGG | - | chr4.3:23200024-23200043 | None:intergenic | 30.0% |
| !! | CTTACAAACATGACTTGTTA+AGG | + | chr4.3:23197997-23198016 | MS.gene052540:intron | 30.0% |
| !! | GTAAGCTGTTTGTTGTTATT+GGG | + | chr4.3:23199229-23199248 | MS.gene052540:CDS | 30.0% |
| !! | TAAGCTGTTTGTTGTTATTG+GGG | + | chr4.3:23199230-23199249 | MS.gene052540:CDS | 30.0% |
| !! | TTCAACTTCTTTTAACTCTG+GGG | - | chr4.3:23199360-23199379 | None:intergenic | 30.0% |
| !! | TTCAAGAGTCTAGTCATTTT+TGG | - | chr4.3:23200809-23200828 | None:intergenic | 30.0% |
| !!! | CAATCGTTTTTGTTTTGTGT+TGG | + | chr4.3:23198734-23198753 | MS.gene052540:intron | 30.0% |
| !!! | GATATTTTGAAACAAGATCC+TGG | - | chr4.3:23199398-23199417 | None:intergenic | 30.0% |
| !!! | TATTTTGATGGCCAAGTTTA+TGG | - | chr4.3:23200545-23200564 | None:intergenic | 30.0% |
| !!! | TTCAAGACAATTGGTTTTGA+TGG | + | chr4.3:23197498-23197517 | MS.gene052540:CDS | 30.0% |
| AAAGTACAAACCACTGAAAC+AGG | - | chr4.3:23200976-23200995 | None:intergenic | 35.0% | |
| AAATTCCAGGTTCCATTCAT+TGG | + | chr4.3:23197243-23197262 | MS.gene052540:intron | 35.0% | |
| AACCTGTAAGTGAACAAGAA+CGG | - | chr4.3:23195804-23195823 | None:intergenic | 35.0% | |
| AACTGTTAGGAGTTAGAACA+GGG | - | chr4.3:23198384-23198403 | None:intergenic | 35.0% | |
| AAGACACGTATGTTTGATAG+TGG | + | chr4.3:23196673-23196692 | MS.gene052540:intron | 35.0% | |
| AAGGAGATAATGTGCAACAA+AGG | - | chr4.3:23198678-23198697 | None:intergenic | 35.0% | |
| AAGTACAAACCACTGAAACA+GGG | - | chr4.3:23200975-23200994 | None:intergenic | 35.0% | |
| AAGTGTTAAGATCTTGAGAG+GGG | - | chr4.3:23195758-23195777 | None:intergenic | 35.0% | |
| AATAAAGACTTCCATTCCCT+TGG | - | chr4.3:23198271-23198290 | None:intergenic | 35.0% | |
| AATATGTTTGACAAGGAGAG+CGG | - | chr4.3:23199831-23199850 | None:intergenic | 35.0% | |
| AATCGGAAAATCCTATAGCA+TGG | - | chr4.3:23196213-23196232 | None:intergenic | 35.0% | |
| AATGAAGCCTTCAAGACAAT+TGG | + | chr4.3:23197489-23197508 | MS.gene052540:CDS | 35.0% | |
| AATGATGATTTCCAAGGGAA+TGG | + | chr4.3:23198257-23198276 | MS.gene052540:intron | 35.0% | |
| ACAGCACACCGTAAAATATA+AGG | - | chr4.3:23196736-23196755 | None:intergenic | 35.0% | |
| ACAGGCCAAACATAAATATG+TGG | - | chr4.3:23200618-23200637 | None:intergenic | 35.0% | |
| ACATATTTATGTTTGGCCTG+TGG | + | chr4.3:23200617-23200636 | MS.gene052540:intron | 35.0% | |
| ACTCATTCTTTAAGTGGAAG+TGG | + | chr4.3:23200564-23200583 | MS.gene052540:intron | 35.0% | |
| AGAGATCTGAACAGTGAAAA+AGG | - | chr4.3:23198697-23198716 | None:intergenic | 35.0% | |
| ATCTACTGCATATCCATTTG+TGG | + | chr4.3:23197783-23197802 | MS.gene052540:intron | 35.0% | |
| ATCTTCATGAGATGCTTTCT+TGG | + | chr4.3:23199480-23199499 | MS.gene052540:intron | 35.0% | |
| ATGCCAATGATGATTTCCAA+GGG | + | chr4.3:23198252-23198271 | MS.gene052540:intron | 35.0% | |
| ATGGCTGTACTAAACCAATT+AGG | + | chr4.3:23200046-23200065 | MS.gene052540:intron | 35.0% | |
| ATTCCCTTGGAAATCATCAT+TGG | - | chr4.3:23198258-23198277 | None:intergenic | 35.0% | |
| ATTGATAGACAGCTAAGTTG+AGG | + | chr4.3:23196844-23196863 | MS.gene052540:intron | 35.0% | |
| ATTGTTAGGAACCCAAGAAT+TGG | + | chr4.3:23198103-23198122 | MS.gene052540:intron | 35.0% | |
| CAAATGTGCTAACATGAGTT+TGG | - | chr4.3:23199677-23199696 | None:intergenic | 35.0% | |
| CAGCACACCGTAAAATATAA+GGG | - | chr4.3:23196735-23196754 | None:intergenic | 35.0% | |
| CATTTCTTGCATGTCTTGTA+TGG | + | chr4.3:23197648-23197667 | MS.gene052540:intron | 35.0% | |
| CCAAAATTCTGCTAAGGAAA+TGG | - | chr4.3:23200405-23200424 | None:intergenic | 35.0% | |
| CCACTAACAATAATAGCACA+AGG | - | chr4.3:23200073-23200092 | None:intergenic | 35.0% | |
| CGACAATATGAGCATTATAC+TGG | + | chr4.3:23200893-23200912 | MS.gene052540:CDS | 35.0% | |
| CTAGCAAACACAACTTCAAT+CGG | + | chr4.3:23199973-23199992 | MS.gene052540:CDS | 35.0% | |
| GAAGGCTTCATTGAACAATA+TGG | - | chr4.3:23197481-23197500 | None:intergenic | 35.0% | |
| GAATTGCAAAAGGTTATTCC+AGG | + | chr4.3:23199377-23199396 | MS.gene052540:intron | 35.0% | |
| GAATTGGTTACACAGTCAAT+AGG | + | chr4.3:23198967-23198986 | MS.gene052540:intron | 35.0% | |
| GAGTGTATGAGACTTGAAAT+TGG | - | chr4.3:23197104-23197123 | None:intergenic | 35.0% | |
| GCAAAAGATGAAACATGAAC+AGG | - | chr4.3:23199566-23199585 | None:intergenic | 35.0% | |
| GCAGGTAAACATAATGATAG+TGG | + | chr4.3:23199183-23199202 | MS.gene052540:intron | 35.0% | |
| GGAAAAAAAATAGAGCTCCT+TGG | - | chr4.3:23198606-23198625 | None:intergenic | 35.0% | |
| GGCTATAACACAGATTATGT+TGG | + | chr4.3:23199036-23199055 | MS.gene052540:CDS | 35.0% | |
| GGTGTACAAGAAACATTAAG+CGG | + | chr4.3:23198526-23198545 | MS.gene052540:intron | 35.0% | |
| GTAATCAGCTTCTAATTCCA+TGG | - | chr4.3:23196001-23196020 | None:intergenic | 35.0% | |
| TAACTGTTAGGAGTTAGAAC+AGG | - | chr4.3:23198385-23198404 | None:intergenic | 35.0% | |
| TAGAACAGGGAGAATAAGTT+AGG | - | chr4.3:23198371-23198390 | None:intergenic | 35.0% | |
| TATGCCAATGATGATTTCCA+AGG | + | chr4.3:23198251-23198270 | MS.gene052540:intron | 35.0% | |
| TCTTCATGAGATGCTTTCTT+GGG | + | chr4.3:23199481-23199500 | MS.gene052540:intron | 35.0% | |
| TGATGAAACACCTGTTTCAA+AGG | + | chr4.3:23200011-23200030 | MS.gene052540:CDS | 35.0% | |
| TGCATTTGCTTACATTGCAT+TGG | - | chr4.3:23196923-23196942 | None:intergenic | 35.0% | |
| TGGCTGTACTAAACCAATTA+GGG | + | chr4.3:23200047-23200066 | MS.gene052540:intron | 35.0% | |
| TTAATCTGCGTCCCTATAAT+GGG | + | chr4.3:23195636-23195655 | MS.gene052540:CDS | 35.0% | |
| TTGAAAGAAGCAGAAGAATC+TGG | + | chr4.3:23200824-23200843 | MS.gene052540:CDS | 35.0% | |
| TTGCAAGAATACAAGCAACT+GGG | + | chr4.3:23196567-23196586 | MS.gene052540:CDS | 35.0% | |
| TTGCTTGTATTCTTGCAACA+AGG | - | chr4.3:23196565-23196584 | None:intergenic | 35.0% | |
| TTGTAAGAAGACCAACAGAT+GGG | + | chr4.3:23199004-23199023 | MS.gene052540:CDS | 35.0% | |
| ! | AAAAGGATGGTAATGCATAC+AGG | - | chr4.3:23199594-23199613 | None:intergenic | 35.0% |
| ! | AAAGGATGGTAATGCATACA+GGG | - | chr4.3:23199593-23199612 | None:intergenic | 35.0% |
| ! | AAAGTACTTCAAGGTTGGTT+AGG | + | chr4.3:23196804-23196823 | MS.gene052540:intron | 35.0% |
| ! | ACAGGTGTTTCATCAACTTT+TGG | - | chr4.3:23200006-23200025 | None:intergenic | 35.0% |
| ! | ACATTTTCTTAGGCCCAAAT+GGG | + | chr4.3:23195921-23195940 | MS.gene052540:intron | 35.0% |
| ! | CCATTTCCTTAGCAGAATTT+TGG | + | chr4.3:23200402-23200421 | MS.gene052540:intron | 35.0% |
| ! | CCTTGTGCTATTATTGTTAG+TGG | + | chr4.3:23200070-23200089 | MS.gene052540:intron | 35.0% |
| ! | GCGTCATGATGTGATTTTAT+TGG | - | chr4.3:23200259-23200278 | None:intergenic | 35.0% |
| ! | GCTATAGTAATGCTGTTTGA+AGG | - | chr4.3:23197131-23197150 | None:intergenic | 35.0% |
| ! | GCTTTTCCGACAAACAATTT+TGG | + | chr4.3:23199796-23199815 | MS.gene052540:intron | 35.0% |
| ! | GGACCTGATACAAAAGTATA+TGG | + | chr4.3:23197420-23197439 | MS.gene052540:CDS | 35.0% |
| ! | TACATCAATTGTTTCTTGGC+AGG | + | chr4.3:23199165-23199184 | MS.gene052540:intron | 35.0% |
| ! | TACATTTTCTTAGGCCCAAA+TGG | + | chr4.3:23195920-23195939 | MS.gene052540:intron | 35.0% |
| ! | TAGCTGTCATTTGATAAAGC+TGG | + | chr4.3:23196346-23196365 | MS.gene052540:intron | 35.0% |
| ! | TGCTATAGGATTTTCCGATT+TGG | + | chr4.3:23196213-23196232 | MS.gene052540:intron | 35.0% |
| ! | TGTTGGTCTACTAAGTGTTT+AGG | + | chr4.3:23197821-23197840 | MS.gene052540:intron | 35.0% |
| ! | TTATATTTTACGGTGTGCTG+TGG | + | chr4.3:23196735-23196754 | MS.gene052540:intron | 35.0% |
| ! | TTCTAGGAACCAACTTAACA+CGG | - | chr4.3:23200284-23200303 | None:intergenic | 35.0% |
| !! | AGAGAACTTGCTGATGTAAT+CGG | + | chr4.3:23199892-23199911 | MS.gene052540:CDS | 35.0% |
| !! | CCATTCATTGGACTTGTTAT+GGG | + | chr4.3:23197255-23197274 | MS.gene052540:CDS | 35.0% |
| !! | CTATTTCTGCTATTGAGGAT+GGG | + | chr4.3:23199061-23199080 | MS.gene052540:CDS | 35.0% |
| !! | GAAAGTGTTAAGATCTTGAG+AGG | - | chr4.3:23195760-23195779 | None:intergenic | 35.0% |
| !! | GGTAAGCTGTTTGTTGTTAT+TGG | + | chr4.3:23199228-23199247 | MS.gene052540:CDS | 35.0% |
| !! | TCCATTCATTGGACTTGTTA+TGG | + | chr4.3:23197254-23197273 | MS.gene052540:CDS | 35.0% |
| !! | TGGTAAAAGTACTTCAAGGT+TGG | + | chr4.3:23196799-23196818 | MS.gene052540:intron | 35.0% |
| !! | TTCCTTAGCAGAATTTTGGT+TGG | + | chr4.3:23200406-23200425 | MS.gene052540:intron | 35.0% |
| !! | TTTGGTGGGTATCTTACTTT+TGG | + | chr4.3:23197315-23197334 | MS.gene052540:CDS | 35.0% |
| !!! | CTTTTGAAATCAAGGGATCT+GGG | + | chr4.3:23198496-23198515 | MS.gene052540:intron | 35.0% |
| !!! | GAATTTTGATTGGTTGGTGT+AGG | - | chr4.3:23198186-23198205 | None:intergenic | 35.0% |
| !!! | TCCTTAGCAGAATTTTGGTT+GGG | + | chr4.3:23200407-23200426 | MS.gene052540:intron | 35.0% |
| !!! | TCTTTTGAAATCAAGGGATC+TGG | + | chr4.3:23198495-23198514 | MS.gene052540:intron | 35.0% |
| !!! | TGGTAGAAGTGCTTTTGTTT+GGG | - | chr4.3:23200598-23200617 | None:intergenic | 35.0% |
| AAACAGGGACAACGAAATCA+GGG | - | chr4.3:23200960-23200979 | None:intergenic | 40.0% | |
| AACCCAAGAATTGGATTCCA+AGG | + | chr4.3:23198112-23198131 | MS.gene052540:intron | 40.0% | |
| AACCTCGTCACAACACTTAA+GGG | - | chr4.3:23198838-23198857 | None:intergenic | 40.0% | |
| AATGAAGCTTACCATAGGTG+CGG | - | chr4.3:23199323-23199342 | None:intergenic | 40.0% | |
| ACAAACAGCTTACCAGCTAA+TGG | - | chr4.3:23199222-23199241 | None:intergenic | 40.0% | |
| ACAGGACTGGAGATGTTTAT+TGG | + | chr4.3:23200860-23200879 | MS.gene052540:CDS | 40.0% | |
| ACCCAAGAATTGGATTCCAA+GGG | + | chr4.3:23198113-23198132 | MS.gene052540:intron | 40.0% | |
| AGGTGATGAAAATCAACGCT+TGG | + | chr4.3:23195960-23195979 | MS.gene052540:CDS | 40.0% | |
| AGTTCTATGACTCTATACGC+GGG | + | chr4.3:23196462-23196481 | MS.gene052540:CDS | 40.0% | |
| ATACATACCACCTTCCCATT+TGG | - | chr4.3:23195938-23195957 | None:intergenic | 40.0% | |
| ATCAACGCTTGGATGCATTA+CGG | + | chr4.3:23195971-23195990 | MS.gene052540:CDS | 40.0% | |
| CAATCTTTGCACCATGCTAT+AGG | + | chr4.3:23196199-23196218 | MS.gene052540:intron | 40.0% | |
| CAGTTCTATGACTCTATACG+CGG | + | chr4.3:23196461-23196480 | MS.gene052540:CDS | 40.0% | |
| CCCATAACAAGTCCAATGAA+TGG | - | chr4.3:23197258-23197277 | None:intergenic | 40.0% | |
| CTATGATGAGATGCAATTGC+TGG | + | chr4.3:23200319-23200338 | MS.gene052540:intron | 40.0% | |
| GAGGTAGTTGTTGTATCTAG+TGG | + | chr4.3:23199088-23199107 | MS.gene052540:intron | 40.0% | |
| GATAATTACCATCCAGAGGA+TGG | + | chr4.3:23199943-23199962 | MS.gene052540:CDS | 40.0% | |
| GATGTACACAACAACATCTC+AGG | - | chr4.3:23199151-23199170 | None:intergenic | 40.0% | |
| GATTACATCAGCAAGTTCTC+TGG | - | chr4.3:23199893-23199912 | None:intergenic | 40.0% | |
| GCTTATGGTGCAAAAGAGAA+AGG | + | chr4.3:23199276-23199295 | MS.gene052540:CDS | 40.0% | |
| GGCTTGGGTTATTGAAATGT+TGG | + | chr4.3:23197804-23197823 | MS.gene052540:intron | 40.0% | |
| GTGAGATGAAACAATGACCT+TGG | - | chr4.3:23196504-23196523 | None:intergenic | 40.0% | |
| GTTAATCTGCGTCCCTATAA+TGG | + | chr4.3:23195635-23195654 | MS.gene052540:CDS | 40.0% | |
| GTTGCAAGAATACAAGCAAC+TGG | + | chr4.3:23196566-23196585 | MS.gene052540:CDS | 40.0% | |
| GTTGTAAGAAGACCAACAGA+TGG | + | chr4.3:23199003-23199022 | MS.gene052540:CDS | 40.0% | |
| TAACCAAATACCTTAGCCAC+TGG | - | chr4.3:23198864-23198883 | None:intergenic | 40.0% | |
| TAAGCTGATAGACTATGCCA+TGG | + | chr4.3:23200925-23200944 | MS.gene052540:CDS | 40.0% | |
| TAATAGCACAAGGCCCTAAT+TGG | - | chr4.3:23200063-23200082 | None:intergenic | 40.0% | |
| TACATACCACCTTCCCATTT+GGG | - | chr4.3:23195937-23195956 | None:intergenic | 40.0% | |
| TAGAACTGATGAGCAACCTT+TGG | - | chr4.3:23196449-23196468 | None:intergenic | 40.0% | |
| TCAAACTCTAGTTGTGTGAG+AGG | - | chr4.3:23198769-23198788 | None:intergenic | 40.0% | |
| TCAATAACCCAAGCCACAAA+TGG | - | chr4.3:23197799-23197818 | None:intergenic | 40.0% | |
| TCCCAACCAAAATTCTGCTA+AGG | - | chr4.3:23200411-23200430 | None:intergenic | 40.0% | |
| TCCCTTGGAATCCAATTCTT+GGG | - | chr4.3:23198117-23198136 | None:intergenic | 40.0% | |
| TGCAACAGATCCTTAAGTGT+AGG | - | chr4.3:23197378-23197397 | None:intergenic | 40.0% | |
| TGCAAGAATACAAGCAACTG+GGG | + | chr4.3:23196568-23196587 | MS.gene052540:CDS | 40.0% | |
| TGCATATCCATTTGTGGCTT+GGG | + | chr4.3:23197789-23197808 | MS.gene052540:intron | 40.0% | |
| TGTGGCGTTTCTATTCTAGA+TGG | + | chr4.3:23200635-23200654 | MS.gene052540:intron | 40.0% | |
| TGTTTGTCGGAAAAGCCATA+TGG | - | chr4.3:23199792-23199811 | None:intergenic | 40.0% | |
| TTCCCTTGGAATCCAATTCT+TGG | - | chr4.3:23198118-23198137 | None:intergenic | 40.0% | |
| TTCTTTAAGTGGAAGTGGAG+CGG | + | chr4.3:23200569-23200588 | MS.gene052540:intron | 40.0% | |
| TTGCTAAGATCGTCAACTGA+CGG | - | chr4.3:23196542-23196561 | None:intergenic | 40.0% | |
| ! | AAGGATGGTAATGCATACAG+GGG | - | chr4.3:23199592-23199611 | None:intergenic | 40.0% |
| ! | AGAAGTGATTAGTTCCCTGA+AGG | - | chr4.3:23200728-23200747 | None:intergenic | 40.0% |
| ! | AGACTATGCCATGGACTTTT+TGG | + | chr4.3:23200934-23200953 | MS.gene052540:CDS | 40.0% |
| ! | ATCTAGAATAGAAACGCCAC+AGG | - | chr4.3:23200636-23200655 | None:intergenic | 40.0% |
| ! | ATGAGAGTAAGTTGACCTTC+AGG | + | chr4.3:23200710-23200729 | MS.gene052540:intron | 40.0% |
| ! | ATGAGCAACCTTTGGAGATA+TGG | - | chr4.3:23196441-23196460 | None:intergenic | 40.0% |
| ! | CAACAGATTTTGTGGGATTC+AGG | + | chr4.3:23197577-23197596 | MS.gene052540:CDS | 40.0% |
| ! | GTTTGCTAATGAGCTATGTG+TGG | + | chr4.3:23197746-23197765 | MS.gene052540:intron | 40.0% |
| ! | TGAGAGTAAGTTGACCTTCA+GGG | + | chr4.3:23200711-23200730 | MS.gene052540:intron | 40.0% |
| ! | TTCTTTAGGAACTCATCTGC+TGG | + | chr4.3:23196246-23196265 | MS.gene052540:intron | 40.0% |
| !! | AACTTCTTTTAACTCTGGGG+AGG | - | chr4.3:23199357-23199376 | None:intergenic | 40.0% |
| !! | GCTATTTCTGCTATTGAGGA+TGG | + | chr4.3:23199060-23199079 | MS.gene052540:CDS | 40.0% |
| !! | TGGTGCTATTTCTGCTATTG+AGG | + | chr4.3:23199056-23199075 | MS.gene052540:CDS | 40.0% |
| !!! | GTGGTAGAAGTGCTTTTGTT+TGG | - | chr4.3:23200599-23200618 | None:intergenic | 40.0% |
| AACCCTTGCTTAAATGCCCA+AGG | + | chr4.3:23198586-23198605 | MS.gene052540:intron | 45.0% | |
| AACTACAATCGATGCCTAGC+AGG | - | chr4.3:23198043-23198062 | None:intergenic | 45.0% | |
| AATCAGGGCCAAAAAGTCCA+TGG | - | chr4.3:23200945-23200964 | None:intergenic | 45.0% | |
| AGCCACTATTGTAACAGGAC+TGG | + | chr4.3:23200847-23200866 | MS.gene052540:CDS | 45.0% | |
| CAACCTCGTCACAACACTTA+AGG | - | chr4.3:23198839-23198858 | None:intergenic | 45.0% | |
| CAAGTCCAATGAATGGAACC+TGG | - | chr4.3:23197251-23197270 | None:intergenic | 45.0% | |
| CCAATCAACTTCCCATCTGT+TGG | - | chr4.3:23199018-23199037 | None:intergenic | 45.0% | |
| CCATGGTTTCGCCCATTATA+GGG | - | chr4.3:23195650-23195669 | None:intergenic | 45.0% | |
| CTCCAGTCCTGTTACAATAG+TGG | - | chr4.3:23200852-23200871 | None:intergenic | 45.0% | |
| CTCCTTGGGCATTTAAGCAA+GGG | - | chr4.3:23198591-23198610 | None:intergenic | 45.0% | |
| CTGCATATCCATTTGTGGCT+TGG | + | chr4.3:23197788-23197807 | MS.gene052540:intron | 45.0% | |
| GAAACAGGGACAACGAAATC+AGG | - | chr4.3:23200961-23200980 | None:intergenic | 45.0% | |
| GAATCATACCATCCTCTGGA+TGG | - | chr4.3:23199954-23199973 | None:intergenic | 45.0% | |
| GAGCATTATACTGGATTGCC+AGG | + | chr4.3:23200902-23200921 | MS.gene052540:CDS | 45.0% | |
| GCATAGTCTATCAGCTTACC+TGG | - | chr4.3:23200923-23200942 | None:intergenic | 45.0% | |
| GCTAGAATCATACCATCCTC+TGG | - | chr4.3:23199958-23199977 | None:intergenic | 45.0% | |
| GGCGCGGATGTTTCAAATTA+TGG | + | chr4.3:23196637-23196656 | MS.gene052540:CDS | 45.0% | |
| GGTGATTTACTGTGACTGAC+AGG | - | chr4.3:23197459-23197478 | None:intergenic | 45.0% | |
| GTGCAAAAGAGAAAGGAGCA+AGG | + | chr4.3:23199283-23199302 | MS.gene052540:CDS | 45.0% | |
| TAGGAACCAACTTAACACGG+TGG | - | chr4.3:23200281-23200300 | None:intergenic | 45.0% | |
| TCAGCGTTGCATTCACCATA+TGG | + | chr4.3:23199774-23199793 | MS.gene052540:intron | 45.0% | |
| TCCAGGTCAACCTACACTTA+AGG | + | chr4.3:23197365-23197384 | MS.gene052540:CDS | 45.0% | |
| TCCATGGTTTCGCCCATTAT+AGG | - | chr4.3:23195651-23195670 | None:intergenic | 45.0% | |
| TGCCGTTCTTGTTCACTTAC+AGG | + | chr4.3:23195799-23195818 | MS.gene052540:CDS | 45.0% | |
| TGGGAAGGTGGTATGTATGA+AGG | + | chr4.3:23195940-23195959 | MS.gene052540:CDS | 45.0% | |
| TGTTCCTGCCATATCTCCAA+AGG | + | chr4.3:23196430-23196449 | MS.gene052540:intron | 45.0% | |
| TTTCGTTGTCCCTGTTTCAG+TGG | + | chr4.3:23200963-23200982 | MS.gene052540:CDS | 45.0% | |
| TTTCTTAGGCCCAAATGGGA+AGG | + | chr4.3:23195925-23195944 | MS.gene052540:intron | 45.0% | |
| TTTGGAGATATGGCAGGAAC+AGG | - | chr4.3:23196431-23196450 | None:intergenic | 45.0% | |
| ! | ACAGCTAAGTTGAGGAAGAG+AGG | + | chr4.3:23196852-23196871 | MS.gene052540:intron | 45.0% |
| ! | ACTTTTGGTACACTCGAGTC+AGG | + | chr4.3:23197330-23197349 | MS.gene052540:CDS | 45.0% |
| ! | AGCAATATGCTGATGGTGCT+AGG | + | chr4.3:23196976-23196995 | MS.gene052540:intron | 45.0% |
| ! | AGGATGGTAATGCATACAGG+GGG | - | chr4.3:23199591-23199610 | None:intergenic | 45.0% |
| ! | CCAACAGATGGGAAGTTGAT+TGG | + | chr4.3:23199015-23199034 | MS.gene052540:CDS | 45.0% |
| ! | CTTTTGGTACACTCGAGTCA+GGG | + | chr4.3:23197331-23197350 | MS.gene052540:CDS | 45.0% |
| ! | GAATGCAACGCTGATTGAAG+CGG | - | chr4.3:23199768-23199787 | None:intergenic | 45.0% |
| ! | GATCCAGTGGCTAAGGTATT+TGG | + | chr4.3:23198858-23198877 | MS.gene052540:intron | 45.0% |
| ! | TCCTTAAGTGTAGGTTGACC+TGG | - | chr4.3:23197369-23197388 | None:intergenic | 45.0% |
| ! | TCTGGAGCCACTATTGTAAC+AGG | + | chr4.3:23200842-23200861 | MS.gene052540:CDS | 45.0% |
| ! | TTTTGGTACACTCGAGTCAG+GGG | + | chr4.3:23197332-23197351 | MS.gene052540:CDS | 45.0% |
| !! | AAACATAGGAAGTGCTGTCG+AGG | + | chr4.3:23197869-23197888 | MS.gene052540:intron | 45.0% |
| !! | CTGTTTGTTGTTATTGGGGC+CGG | + | chr4.3:23199234-23199253 | MS.gene052540:CDS | 45.0% |
| !! | GAACTTGCTGATGTAATCGG+TGG | + | chr4.3:23199895-23199914 | MS.gene052540:CDS | 45.0% |
| !! | TGCTAGGCATCGATTGTAGT+TGG | + | chr4.3:23198042-23198061 | MS.gene052540:intron | 45.0% |
| !!! | ATTCTTTTAATTTTATTAAA+TGG | + | chr4.3:23199448-23199467 | MS.gene052540:intron | 5.0% |
| AAAGATTGCAACGACTGCCG+TGG | + | chr4.3:23196601-23196620 | MS.gene052540:CDS | 50.0% | |
| ATGACGCCACCGTGTTAAGT+TGG | + | chr4.3:23200272-23200291 | MS.gene052540:intron | 50.0% | |
| CAGCGTTACCATTCCTCACA+AGG | + | chr4.3:23198806-23198825 | MS.gene052540:intron | 50.0% | |
| CGTTACCATTCCTCACAAGG+AGG | + | chr4.3:23198809-23198828 | MS.gene052540:CDS | 50.0% | |
| GCTCCTTGGGCATTTAAGCA+AGG | - | chr4.3:23198592-23198611 | None:intergenic | 50.0% | |
| GTGATTGCAAACCGCACCTA+TGG | + | chr4.3:23199309-23199328 | MS.gene052540:CDS | 50.0% | |
| ! | ACAGCTGTTTCGCCATTAGC+TGG | + | chr4.3:23199207-23199226 | MS.gene052540:CDS | 50.0% |
| ! | AGCCCTTAAGTGTTGTGACG+AGG | + | chr4.3:23198833-23198852 | MS.gene052540:CDS | 50.0% |
| ! | GCAACCTTTGGAGATATGGC+AGG | - | chr4.3:23196437-23196456 | None:intergenic | 50.0% |
| ! | GGATGCATTACGGTTAGCCA+TGG | + | chr4.3:23195981-23196000 | MS.gene052540:CDS | 50.0% |
| ! | TTGTGACGAGGTTGATCCAG+TGG | + | chr4.3:23198845-23198864 | MS.gene052540:CDS | 50.0% |
| !! | CCCTATAATGGGCGAAACCA+TGG | + | chr4.3:23195647-23195666 | MS.gene052540:CDS | 50.0% |
| !! | TGGACTTGTTATGGGCGACA+GGG | + | chr4.3:23197263-23197282 | MS.gene052540:CDS | 50.0% |
| !! | TTGGACTTGTTATGGGCGAC+AGG | + | chr4.3:23197262-23197281 | MS.gene052540:CDS | 50.0% |
| !! | TTTGTTGTTATTGGGGCCGG+TGG | + | chr4.3:23199237-23199256 | MS.gene052540:CDS | 50.0% |
| CGCCACATCAGTGATCTCCA+CGG | - | chr4.3:23196621-23196640 | None:intergenic | 55.0% | |
| CTTAGGCCCAAATGGGAAGG+TGG | + | chr4.3:23195928-23195947 | MS.gene052540:intron | 55.0% | |
| TCAAGGGATCTGGGCCCTAA+AGG | + | chr4.3:23198505-23198524 | MS.gene052540:intron | 55.0% | |
| TCAGGGGTAGTTTCAGCTCC+AGG | + | chr4.3:23197348-23197367 | MS.gene052540:CDS | 55.0% | |
| TGCCGTGGAGATCACTGATG+TGG | + | chr4.3:23196616-23196635 | MS.gene052540:CDS | 55.0% | |
| TGGAGATCACTGATGTGGCG+CGG | + | chr4.3:23196621-23196640 | MS.gene052540:CDS | 55.0% | |
| TTAAGGGCTGCCTCCTTGTG+AGG | - | chr4.3:23198822-23198841 | None:intergenic | 55.0% | |
| ! | CGAGGTTGATCCAGTGGCTA+AGG | + | chr4.3:23198851-23198870 | MS.gene052540:CDS | 55.0% |
| !! | GCTATTGAGGATGGGCTACG+AGG | + | chr4.3:23199069-23199088 | MS.gene052540:CDS | 55.0% |
| !! | GCTGGGAAGGCACTTGCTTA+TGG | + | chr4.3:23199261-23199280 | MS.gene052540:CDS | 55.0% |
| !! | GGACTTGTTATGGGCGACAG+GGG | + | chr4.3:23197264-23197283 | MS.gene052540:CDS | 55.0% |
| AAGTGCCTTCCCAGCACCAC+CGG | - | chr4.3:23199256-23199275 | None:intergenic | 60.0% | |
| GGCTGCCTCCTTGTGAGGAA+TGG | - | chr4.3:23198817-23198836 | None:intergenic | 60.0% | |
| TTATTGGGGCCGGTGGTGCT+GGG | + | chr4.3:23199244-23199263 | MS.gene052540:CDS | 60.0% | |
| GTTATTGGGGCCGGTGGTGC+TGG | + | chr4.3:23199243-23199262 | MS.gene052540:CDS | 65.0% | |
| ! | TGGGGCCGGTGGTGCTGGGA+AGG | + | chr4.3:23199248-23199267 | MS.gene052540:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 23195618 | 23201009 | 23195618 | ID=MS.gene052540 |
| chr4.3 | mRNA | 23195618 | 23201009 | 23195618 | ID=MS.gene052540.t1;Parent=MS.gene052540 |
| chr4.3 | exon | 23195618 | 23195820 | 23195618 | ID=MS.gene052540.t1.exon1;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23195618 | 23195820 | 23195618 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| chr4.3 | exon | 23195933 | 23196038 | 23195933 | ID=MS.gene052540.t1.exon2;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23195933 | 23196038 | 23195933 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| chr4.3 | exon | 23196452 | 23196670 | 23196452 | ID=MS.gene052540.t1.exon3;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23196452 | 23196670 | 23196452 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| chr4.3 | exon | 23197252 | 23197598 | 23197252 | ID=MS.gene052540.t1.exon4;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23197252 | 23197598 | 23197252 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| chr4.3 | exon | 23198809 | 23198872 | 23198809 | ID=MS.gene052540.t1.exon5;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23198809 | 23198872 | 23198809 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| chr4.3 | exon | 23198982 | 23199090 | 23198982 | ID=MS.gene052540.t1.exon6;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23198982 | 23199090 | 23198982 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| chr4.3 | exon | 23199187 | 23199330 | 23199187 | ID=MS.gene052540.t1.exon7;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23199187 | 23199330 | 23199187 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| chr4.3 | exon | 23199884 | 23200032 | 23199884 | ID=MS.gene052540.t1.exon8;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23199884 | 23200032 | 23199884 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| chr4.3 | exon | 23200761 | 23201009 | 23200761 | ID=MS.gene052540.t1.exon9;Parent=MS.gene052540.t1 |
| chr4.3 | CDS | 23200761 | 23201009 | 23200761 | ID=cds.MS.gene052540.t1;Parent=MS.gene052540.t1 |
| Gene Sequence |
| Protein sequence |
