Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32219.t1 | XP_003608266.1 | 98.1 | 268 | 3 | 1 | 1 | 268 | 1 | 266 | 2.80E-123 | 451.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32219.t1 | Q8VYN2 | 84.1 | 195 | 29 | 1 | 70 | 262 | 96 | 290 | 6.7e-89 | 328.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32219.t1 | Q2HTV7 | 98.1 | 268 | 3 | 1 | 1 | 268 | 1 | 266 | 2.0e-123 | 451.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052570 | MS.gene32219 | 0.848097 | 7.61E-60 | -1.69E-46 |
| MS.gene057001 | MS.gene32219 | 0.800108 | 1.68E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32219.t1 | MTR_4g091470 | 98.507 | 268 | 2 | 1 | 1 | 268 | 1 | 266 | 0.0 | 535 |
| MS.gene32219.t1 | MTR_2g089995 | 69.373 | 271 | 80 | 2 | 1 | 268 | 1 | 271 | 3.74e-115 | 332 |
| MS.gene32219.t1 | MTR_2g081140 | 72.273 | 220 | 57 | 3 | 52 | 268 | 25 | 243 | 8.47e-104 | 302 |
| MS.gene32219.t1 | MTR_2g089995 | 66.825 | 211 | 68 | 1 | 1 | 209 | 1 | 211 | 1.24e-86 | 258 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32219.t1 | AT4G21450 | 65.203 | 296 | 74 | 5 | 1 | 268 | 1 | 295 | 2.72e-124 | 356 |
| MS.gene32219.t1 | AT4G21450 | 60.952 | 315 | 75 | 6 | 1 | 268 | 1 | 314 | 1.35e-118 | 342 |
| MS.gene32219.t1 | AT4G05060 | 65.965 | 285 | 74 | 6 | 1 | 263 | 1 | 284 | 4.54e-111 | 322 |
| MS.gene32219.t1 | AT5G54110 | 64.427 | 253 | 80 | 4 | 16 | 264 | 16 | 262 | 5.09e-101 | 296 |
| MS.gene32219.t1 | AT4G21450 | 59.524 | 210 | 57 | 4 | 1 | 182 | 1 | 210 | 8.35e-71 | 217 |
| MS.gene32219.t1 | AT5G54110 | 60.819 | 171 | 57 | 4 | 16 | 182 | 16 | 180 | 1.74e-51 | 167 |
Find 59 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATCTAATGTAGCATTTA+AGG | 0.154803 | 4.4:+22530145 | MS.gene32219:CDS |
| AAATGCTACATTAGATTTAC+TGG | 0.228582 | 4.4:-22530141 | None:intergenic |
| CAGGTTTCTTCCGTGCTTCA+AGG | 0.310647 | 4.4:-22531233 | None:intergenic |
| TCAAGAGGAGTGTTACTGTT+AGG | 0.327375 | 4.4:-22527890 | None:intergenic |
| GATGCAGGGCCTAAAATTAT+TGG | 0.351535 | 4.4:+22531261 | MS.gene32219:CDS |
| TTAGGTTCGGAGTGAGGTTT+GGG | 0.375172 | 4.4:-22527755 | None:intergenic |
| GGAAAGTAAAGTTTGTTAGA+AGG | 0.376948 | 4.4:-22527995 | None:intergenic |
| CTTAGGTTCGGAGTGAGGTT+TGG | 0.383229 | 4.4:-22527756 | None:intergenic |
| CAAGAGGAGTGTTACTGTTA+GGG | 0.393536 | 4.4:-22527889 | None:intergenic |
| TAAAATTATCTAACCAGCTC+GGG | 0.398885 | 4.4:-22530778 | None:intergenic |
| TGTAGATGAGCCAGGAAAAC+AGG | 0.420800 | 4.4:+22530091 | MS.gene32219:intron |
| ATTTAAAATCATGAGTTTGA+AGG | 0.426290 | 4.4:+22530732 | MS.gene32219:CDS |
| TTGAAGAAATTCCAAACCTT+AGG | 0.429466 | 4.4:-22527773 | None:intergenic |
| TTAGGCCCTGCATCTTCTGC+AGG | 0.429473 | 4.4:-22531252 | None:intergenic |
| CTCACAGGACTTGGACGCTC+TGG | 0.438074 | 4.4:-22530950 | None:intergenic |
| AACAGTAACACTCCTCTTGA+AGG | 0.439501 | 4.4:+22527893 | MS.gene32219:CDS |
| AGTTGTTTCATGCGTCCTCC+TGG | 0.445612 | 4.4:+22530507 | MS.gene32219:CDS |
| GAAATTCCAAACCTTAGGTT+CGG | 0.448162 | 4.4:-22527768 | None:intergenic |
| CTCACTCCGAACCTAAGGTT+TGG | 0.454205 | 4.4:+22527762 | MS.gene32219:CDS |
| GCTTGAGACGACGTCGTGTT+GGG | 0.464165 | 4.4:-22527967 | None:intergenic |
| ATGAGCCAGGAAAACAGGTT+AGG | 0.467951 | 4.4:+22530096 | MS.gene32219:CDS |
| AAGATACCTTGCTAAGCAGC+AGG | 0.483964 | 4.4:+22531435 | MS.gene32219:CDS |
| AGAAGACGACGTCGTGTTGG+TGG | 0.485495 | 4.4:-22527825 | None:intergenic |
| AAGAAACCTGCAGAAGATGC+AGG | 0.486887 | 4.4:+22531246 | MS.gene32219:CDS |
| GGCGAGAGTATCATAGCAAC+CGG | 0.491969 | 4.4:+22530546 | MS.gene32219:CDS |
| CCGTCTTGTGTAGATGAGCC+AGG | 0.506060 | 4.4:+22530083 | MS.gene32219:intron |
| AGCTTGAGACGACGTCGTGT+TGG | 0.512822 | 4.4:-22527968 | None:intergenic |
| GTGAGGTTTGGGTTCAGCTA+CGG | 0.514019 | 4.4:-22527744 | None:intergenic |
| ATAAAATTATCTAACCAGCT+CGG | 0.529735 | 4.4:-22530779 | None:intergenic |
| ATCATGAGTTTGAAGGTCAA+AGG | 0.531786 | 4.4:+22530739 | MS.gene32219:CDS |
| TTTGGGTTCAGCTACGGCCA+TGG | 0.535390 | 4.4:-22527738 | None:intergenic |
| AATTGATTACGTCCCCGAGC+TGG | 0.536261 | 4.4:+22530765 | MS.gene32219:CDS |
| GGGCCTAAAATTATTGGTGA+AGG | 0.537596 | 4.4:+22531267 | MS.gene32219:CDS |
| CAAACCTCACTCCGAACCTA+AGG | 0.538817 | 4.4:+22527757 | MS.gene32219:CDS |
| AACAGGTTAGGAGTGCCATC+AGG | 0.542734 | 4.4:+22530108 | MS.gene32219:CDS |
| AACAGAAGACGACGTCGTGT+TGG | 0.544962 | 4.4:-22527828 | None:intergenic |
| GAAGTGTTAGAATTGCGAAA+AGG | 0.547722 | 4.4:-22527800 | None:intergenic |
| AGGGCTTGTCATTGACGAAT+GGG | 0.556311 | 4.4:+22531287 | MS.gene32219:CDS |
| CCAGGTGCAAGGATAGCTCC+AGG | 0.557167 | 4.4:-22530525 | None:intergenic |
| AAATCTGCTCAACTGCCACC+TGG | 0.560385 | 4.4:-22530907 | None:intergenic |
| CCTGGAGCTATCCTTGCACC+TGG | 0.563540 | 4.4:+22530525 | MS.gene32219:CDS |
| AGGTTTCTTCCGTGCTTCAA+GGG | 0.567437 | 4.4:-22531232 | None:intergenic |
| TGATACTCTCGCCAGGTGCA+AGG | 0.572027 | 4.4:-22530536 | None:intergenic |
| GTTGCTATGATACTCTCGCC+AGG | 0.577145 | 4.4:-22530543 | None:intergenic |
| GGCCTAAAATTATTGGTGAA+GGG | 0.578667 | 4.4:+22531268 | MS.gene32219:CDS |
| CATCGCCCTGCTGCTTAGCA+AGG | 0.579673 | 4.4:-22531441 | None:intergenic |
| AAGGGCTTGTCATTGACGAA+TGG | 0.585970 | 4.4:+22531286 | MS.gene32219:CDS |
| CAAACCTTAGGTTCGGAGTG+AGG | 0.596942 | 4.4:-22527761 | None:intergenic |
| GATGATGATGTTGATGATGA+AGG | 0.601137 | 4.4:-22527859 | None:intergenic |
| CTGATGCTGCCCTTGAAGCA+CGG | 0.601872 | 4.4:+22531223 | MS.gene32219:CDS |
| TGCTAAGCAGCAGGGCGATG+TGG | 0.604162 | 4.4:+22531444 | MS.gene32219:CDS |
| AATGAAAAGCCAGAAAAGAG+TGG | 0.610602 | 4.4:+22530703 | MS.gene32219:CDS |
| AGAAACCTGCAGAAGATGCA+GGG | 0.611107 | 4.4:+22531247 | MS.gene32219:CDS |
| GTTTGATGAGCAGAAAGACC+AGG | 0.616359 | 4.4:+22530889 | MS.gene32219:intron |
| TGTGAAGTTGAACCTTCAAG+AGG | 0.629338 | 4.4:-22527905 | None:intergenic |
| AGATACCTTGCTAAGCAGCA+GGG | 0.656370 | 4.4:+22531436 | MS.gene32219:CDS |
| AAAATTATCTAACCAGCTCG+GGG | 0.659211 | 4.4:-22530777 | None:intergenic |
| TGATGAGCAGAAAGACCAGG+TGG | 0.693468 | 4.4:+22530892 | MS.gene32219:CDS |
| GGTGCAAGGATAGCTCCAGG+AGG | 0.793325 | 4.4:-22530522 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTCAATTTAATTAGA+GGG | + | chr4.4:22528130-22528149 | MS.gene32219:intron | 10.0% |
| ! | CCCCCCCCCCCCCCCCCCCG+AGG | - | chr4.4:22529211-22529230 | None:intergenic | 100.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | + | chr4.4:22529211-22529230 | MS.gene32219:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+AGG | + | chr4.4:22529212-22529231 | MS.gene32219:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr4.4:22529212-22529231 | MS.gene32219:intron | 100.0% |
| !! | AATGTTACATGATAATAAAT+AGG | - | chr4.4:22530202-22530221 | None:intergenic | 15.0% |
| !! | AATTGATTGTATATTACTTA+TGG | + | chr4.4:22531144-22531163 | MS.gene32219:intron | 15.0% |
| !! | ATGTTACATGATAATAAATA+GGG | - | chr4.4:22530201-22530220 | None:intergenic | 15.0% |
| !! | ATTGATTGTATATTACTTAT+GGG | + | chr4.4:22531145-22531164 | MS.gene32219:intron | 15.0% |
| !! | GTTTATTTCAATTTAATTAG+AGG | + | chr4.4:22528129-22528148 | MS.gene32219:intron | 15.0% |
| !!! | AAGATCGTTTTTTTATTTTT+TGG | - | chr4.4:22528971-22528990 | None:intergenic | 15.0% |
| !!! | ATCTATAACTATAAACTTTT+GGG | + | chr4.4:22528185-22528204 | MS.gene32219:intron | 15.0% |
| !!! | ATTTTTCTTCATTAAGATTT+TGG | + | chr4.4:22531173-22531192 | MS.gene32219:intron | 15.0% |
| !!! | TATCTATAACTATAAACTTT+TGG | + | chr4.4:22528184-22528203 | MS.gene32219:intron | 15.0% |
| !!! | TTATTTAGATTTGTTTTCTA+AGG | + | chr4.4:22530840-22530859 | MS.gene32219:intron | 15.0% |
| !!! | TTTACTTTTTATGTTGTTAT+TGG | + | chr4.4:22528052-22528071 | MS.gene32219:intron | 15.0% |
| !! | AAACCAGATAAAAAAGTTTA+GGG | - | chr4.4:22528375-22528394 | None:intergenic | 20.0% |
| !! | AAGCTAGTATAATAAATACA+AGG | + | chr4.4:22530615-22530634 | MS.gene32219:intron | 20.0% |
| !! | ATATAAAGACGTATTAAGTA+GGG | - | chr4.4:22530263-22530282 | None:intergenic | 20.0% |
| !! | TAAACCAGATAAAAAAGTTT+AGG | - | chr4.4:22528376-22528395 | None:intergenic | 20.0% |
| !! | TAAATCTAATGTAGCATTTA+AGG | + | chr4.4:22530145-22530164 | MS.gene32219:CDS | 20.0% |
| !! | TCAATTTCCATACATTATAA+GGG | + | chr4.4:22528614-22528633 | MS.gene32219:intron | 20.0% |
| !! | TGTTACATGATAATAAATAG+GGG | - | chr4.4:22530200-22530219 | None:intergenic | 20.0% |
| !! | TTATAATGTATGGAAATTGA+GGG | - | chr4.4:22528614-22528633 | None:intergenic | 20.0% |
| !!! | AAACTGTAAATTTTGAAAGT+AGG | + | chr4.4:22529846-22529865 | MS.gene32219:intron | 20.0% |
| !!! | AATTATCTGTTACTTTATTG+TGG | + | chr4.4:22531059-22531078 | MS.gene32219:intron | 20.0% |
| !!! | ATTATCTGTTACTTTATTGT+GGG | + | chr4.4:22531060-22531079 | MS.gene32219:intron | 20.0% |
| !!! | ATTTAAAATCATGAGTTTGA+AGG | + | chr4.4:22530732-22530751 | MS.gene32219:CDS | 20.0% |
| !!! | CCATATATGATTTTAGTTTT+GGG | + | chr4.4:22528704-22528723 | MS.gene32219:intron | 20.0% |
| !!! | TCCATATATGATTTTAGTTT+TGG | + | chr4.4:22528703-22528722 | MS.gene32219:intron | 20.0% |
| !!! | TGTATTTATTATACTAGCTT+TGG | - | chr4.4:22530615-22530634 | None:intergenic | 20.0% |
| !!! | TTCAGTGTACTTTTTTATTT+GGG | + | chr4.4:22530983-22531002 | MS.gene32219:intron | 20.0% |
| !!! | TTTCAGTGTACTTTTTTATT+TGG | + | chr4.4:22530982-22531001 | MS.gene32219:intron | 20.0% |
| ! | AAAATTTAGTTAGAGAACGA+TGG | + | chr4.4:22528680-22528699 | MS.gene32219:intron | 25.0% |
| ! | AAACAAAATTGAGTAAGAGA+AGG | - | chr4.4:22530051-22530070 | None:intergenic | 25.0% |
| ! | AAATGCTACATTAGATTTAC+TGG | - | chr4.4:22530144-22530163 | None:intergenic | 25.0% |
| ! | AATACTTTGTGAAGTAGTAT+TGG | - | chr4.4:22528549-22528568 | None:intergenic | 25.0% |
| ! | ACTAAGCAGTTAAATTTGAA+TGG | + | chr4.4:22529675-22529694 | MS.gene32219:intron | 25.0% |
| ! | ATAAAATTATCTAACCAGCT+CGG | - | chr4.4:22530782-22530801 | None:intergenic | 25.0% |
| ! | ATTACTGTACACACAATTTA+TGG | + | chr4.4:22529547-22529566 | MS.gene32219:intron | 25.0% |
| ! | CAAAAATATGTTACTGCATT+TGG | + | chr4.4:22528311-22528330 | MS.gene32219:intron | 25.0% |
| ! | CATATAAAGACGTATTAAGT+AGG | - | chr4.4:22530264-22530283 | None:intergenic | 25.0% |
| ! | CCCAAAACTAAAATCATATA+TGG | - | chr4.4:22528707-22528726 | None:intergenic | 25.0% |
| ! | CCTATATTCTAAATTAGTGT+TGG | + | chr4.4:22530421-22530440 | MS.gene32219:intron | 25.0% |
| ! | CTCAATTTCCATACATTATA+AGG | + | chr4.4:22528613-22528632 | MS.gene32219:intron | 25.0% |
| ! | CTTATAATGTATGGAAATTG+AGG | - | chr4.4:22528615-22528634 | None:intergenic | 25.0% |
| ! | GTCACAGCTAATATAAATTA+GGG | + | chr4.4:22529441-22529460 | MS.gene32219:intron | 25.0% |
| ! | GTTACATGATAATAAATAGG+GGG | - | chr4.4:22530199-22530218 | None:intergenic | 25.0% |
| ! | TAGTAAAAGTAAGAATAGAC+AGG | - | chr4.4:22530345-22530364 | None:intergenic | 25.0% |
| ! | TATAAAGACGTATTAAGTAG+GGG | - | chr4.4:22530262-22530281 | None:intergenic | 25.0% |
| !! | AAAAAACGATCTTTTCTCTT+TGG | + | chr4.4:22528978-22528997 | MS.gene32219:intron | 25.0% |
| !! | AAAAACGATCTTTTCTCTTT+GGG | + | chr4.4:22528979-22528998 | MS.gene32219:intron | 25.0% |
| !! | CAAATGCAGTAACATATTTT+TGG | - | chr4.4:22528313-22528332 | None:intergenic | 25.0% |
| !! | CCAACACTAATTTAGAATAT+AGG | - | chr4.4:22530424-22530443 | None:intergenic | 25.0% |
| !! | CTAAAAGTACATACAACATT+AGG | - | chr4.4:22529929-22529948 | None:intergenic | 25.0% |
| !! | CTAATGTTGTATGTACTTTT+AGG | + | chr4.4:22529927-22529946 | MS.gene32219:intron | 25.0% |
| !! | CTTTCTGAAAAAACATAATC+AGG | - | chr4.4:22531405-22531424 | None:intergenic | 25.0% |
| !! | GCTTTCAATTTTTCCATTTT+CGG | - | chr4.4:22528573-22528592 | None:intergenic | 25.0% |
| !! | TTCTCTACATATTCTTTTCT+GGG | + | chr4.4:22530584-22530603 | MS.gene32219:intron | 25.0% |
| !! | TTTCTCTACATATTCTTTTC+TGG | + | chr4.4:22530583-22530602 | MS.gene32219:intron | 25.0% |
| !!! | ACTAAGATACCAAGTTTTAA+TGG | + | chr4.4:22529815-22529834 | MS.gene32219:intron | 25.0% |
| !!! | AGATTTTGGAAAAATTGAAG+CGG | + | chr4.4:22531187-22531206 | MS.gene32219:intron | 25.0% |
| !!! | CTGAAATTTTTTTTACTCAC+AGG | - | chr4.4:22530968-22530987 | None:intergenic | 25.0% |
| !!! | TTATGTTTTTTCAGAAAGAG+AGG | + | chr4.4:22531407-22531426 | MS.gene32219:intron | 25.0% |
| !!! | TTTCCCTAAACTTTTTTATC+TGG | + | chr4.4:22528369-22528388 | MS.gene32219:intron | 25.0% |
| !!! | TTTTAGGTCCATAAATACAT+AGG | + | chr4.4:22529943-22529962 | MS.gene32219:intron | 25.0% |
| !!! | TTTTATTTGGGCAATTTTTG+TGG | + | chr4.4:22530995-22531014 | MS.gene32219:intron | 25.0% |
| !!! | TTTTATTTTTTGGTTACCCA+TGG | - | chr4.4:22528961-22528980 | None:intergenic | 25.0% |
| AAAAAGGCCCTTATAATGTA+TGG | - | chr4.4:22528624-22528643 | None:intergenic | 30.0% | |
| AAGTAGGGGAATAAATAAAC+AGG | - | chr4.4:22530248-22530267 | None:intergenic | 30.0% | |
| AGATTAAAATCTAACGCCTA+AGG | - | chr4.4:22528650-22528669 | None:intergenic | 30.0% | |
| AGCTGTCGTAACTATTATAA+CGG | - | chr4.4:22529114-22529133 | None:intergenic | 30.0% | |
| ATCAGAGAAGACAACATTTA+AGG | + | chr4.4:22529024-22529043 | MS.gene32219:intron | 30.0% | |
| CATATAGTACATTCATCACT+TGG | - | chr4.4:22528745-22528764 | None:intergenic | 30.0% | |
| CTAATATAAATTAGGGAGCA+AGG | + | chr4.4:22529448-22529467 | MS.gene32219:intron | 30.0% | |
| GAATTCTTGCCTGTTTAAAA+AGG | + | chr4.4:22528396-22528415 | MS.gene32219:intron | 30.0% | |
| GGTCACAGCTAATATAAATT+AGG | + | chr4.4:22529440-22529459 | MS.gene32219:intron | 30.0% | |
| TAAAATTATCTAACCAGCTC+GGG | - | chr4.4:22530781-22530800 | None:intergenic | 30.0% | |
| TAAATACATAGGCAGATTCA+TGG | + | chr4.4:22529954-22529973 | MS.gene32219:intron | 30.0% | |
| TAAATAGGGGGTAAATAAAC+AGG | - | chr4.4:22530187-22530206 | None:intergenic | 30.0% | |
| TGAAAGTAGGTCAAACAAAT+GGG | + | chr4.4:22529859-22529878 | MS.gene32219:intron | 30.0% | |
| TGAATCTGCCTATGTATTTA+TGG | - | chr4.4:22529954-22529973 | None:intergenic | 30.0% | |
| TTCCAGGCAGAAAAAATTAA+TGG | - | chr4.4:22530866-22530885 | None:intergenic | 30.0% | |
| TTGAAAGTAGGTCAAACAAA+TGG | + | chr4.4:22529858-22529877 | MS.gene32219:intron | 30.0% | |
| TTGAAGAAATTCCAAACCTT+AGG | - | chr4.4:22527776-22527795 | None:intergenic | 30.0% | |
| ! | AACATTTAAGGTCAGTGTTA+AGG | + | chr4.4:22529036-22529055 | MS.gene32219:intron | 30.0% |
| ! | CAAATTGCAATACTCACTTT+TGG | + | chr4.4:22531347-22531366 | MS.gene32219:intron | 30.0% |
| ! | TCAACCATTCCTTTTTAAAC+AGG | - | chr4.4:22528408-22528427 | None:intergenic | 30.0% |
| ! | TCACAAAGTATTTCCGAAAA+TGG | + | chr4.4:22528557-22528576 | MS.gene32219:intron | 30.0% |
| ! | TTCTTTTTACCAACATAGTG+TGG | + | chr4.4:22528782-22528801 | MS.gene32219:intron | 30.0% |
| !! | GGAAAGTAAAGTTTGTTAGA+AGG | - | chr4.4:22527998-22528017 | None:intergenic | 30.0% |
| !!! | TATGATTTTAGTTTTGGGTC+AGG | + | chr4.4:22528709-22528728 | MS.gene32219:intron | 30.0% |
| !!! | TCTGGCTTTTCATTATTTTC+TGG | - | chr4.4:22530697-22530716 | None:intergenic | 30.0% |
| !!! | TTTTTTTTACTCACAGGACT+TGG | - | chr4.4:22530962-22530981 | None:intergenic | 30.0% |
| AAAATTATCTAACCAGCTCG+GGG | - | chr4.4:22530780-22530799 | None:intergenic | 35.0% | |
| AAATGAGCAGCATACATACA+AGG | - | chr4.4:22528019-22528038 | None:intergenic | 35.0% | |
| AACTAGTGCAGAAAGAACAA+AGG | - | chr4.4:22531034-22531053 | None:intergenic | 35.0% | |
| AATGAAAAGCCAGAAAAGAG+TGG | + | chr4.4:22530703-22530722 | MS.gene32219:CDS | 35.0% | |
| AGAAATCGAATATTGCCTAC+CGG | - | chr4.4:22530568-22530587 | None:intergenic | 35.0% | |
| AGTAACTTCCATTGCTAACA+AGG | - | chr4.4:22529717-22529736 | None:intergenic | 35.0% | |
| AGTCATGACTAAAAAAGGGA+AGG | - | chr4.4:22529332-22529351 | None:intergenic | 35.0% | |
| ATCATGAGTTTGAAGGTCAA+AGG | + | chr4.4:22530739-22530758 | MS.gene32219:CDS | 35.0% | |
| ATGTCATACAAAATACCTCG+GGG | + | chr4.4:22529193-22529212 | MS.gene32219:intron | 35.0% | |
| ATGTTGTCTTCTCTGATTGA+CGG | - | chr4.4:22529021-22529040 | None:intergenic | 35.0% | |
| ATTTATATTAGCTGTGACCG+AGG | - | chr4.4:22529439-22529458 | None:intergenic | 35.0% | |
| CAGCAGTCATGACTAAAAAA+GGG | - | chr4.4:22529336-22529355 | None:intergenic | 35.0% | |
| CTTCTAAACTTGTGCCTTAA+GGG | + | chr4.4:22528334-22528353 | MS.gene32219:intron | 35.0% | |
| CTTGCCTGTTTAAAAAGGAA+TGG | + | chr4.4:22528401-22528420 | MS.gene32219:intron | 35.0% | |
| GAAATTCCAAACCTTAGGTT+CGG | - | chr4.4:22527771-22527790 | None:intergenic | 35.0% | |
| GATGTCATACAAAATACCTC+GGG | + | chr4.4:22529192-22529211 | MS.gene32219:intron | 35.0% | |
| GCATAAAATGACCAATCATG+AGG | - | chr4.4:22530026-22530045 | None:intergenic | 35.0% | |
| GGATGTCATACAAAATACCT+CGG | + | chr4.4:22529191-22529210 | MS.gene32219:intron | 35.0% | |
| GGCCTAAAATTATTGGTGAA+GGG | + | chr4.4:22531268-22531287 | MS.gene32219:CDS | 35.0% | |
| GTGAATAAGTGAAATGTCAC+AGG | - | chr4.4:22528505-22528524 | None:intergenic | 35.0% | |
| GTTAGCAATGGAAGTTACTA+GGG | + | chr4.4:22529718-22529737 | MS.gene32219:intron | 35.0% | |
| TCAGCAGTCATGACTAAAAA+AGG | - | chr4.4:22529337-22529356 | None:intergenic | 35.0% | |
| TGTTAGCAATGGAAGTTACT+AGG | + | chr4.4:22529717-22529736 | MS.gene32219:intron | 35.0% | |
| ! | AATTTGAGTCCACTCTTTTC+TGG | - | chr4.4:22530715-22530734 | None:intergenic | 35.0% |
| ! | AGCCCTTCACCAATAATTTT+AGG | - | chr4.4:22531273-22531292 | None:intergenic | 35.0% |
| ! | AGGTATTTTGTATGACATCC+TGG | - | chr4.4:22529191-22529210 | None:intergenic | 35.0% |
| ! | GAAGTGTTAGAATTGCGAAA+AGG | - | chr4.4:22527803-22527822 | None:intergenic | 35.0% |
| ! | TTACTATGTCACTGTTTTGC+AGG | + | chr4.4:22530359-22530378 | MS.gene32219:intron | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | - | chr4.4:22528351-22528370 | None:intergenic | 35.0% |
| !! | ACTGGTGTTTTTAATCCTGA+TGG | - | chr4.4:22530126-22530145 | None:intergenic | 35.0% |
| !! | ATATGCAGTTTTTGTTGTCG+CGG | + | chr4.4:22530295-22530314 | MS.gene32219:intron | 35.0% |
| !! | CGTACGAAAGATAACTTGTT+AGG | + | chr4.4:22528867-22528886 | MS.gene32219:intron | 35.0% |
| !! | GAAAGATAACTTGTTAGGAG+AGG | + | chr4.4:22528872-22528891 | MS.gene32219:intron | 35.0% |
| !! | GATGATGATGTTGATGATGA+AGG | - | chr4.4:22527862-22527881 | None:intergenic | 35.0% |
| !! | TGGTTGACTTGTTTATGTTC+TGG | + | chr4.4:22528421-22528440 | MS.gene32219:intron | 35.0% |
| !!! | GTTTTTTCAGAAAGAGAGGA+GGG | + | chr4.4:22531411-22531430 | MS.gene32219:intron | 35.0% |
| !!! | TGTTTTTTCAGAAAGAGAGG+AGG | + | chr4.4:22531410-22531429 | MS.gene32219:intron | 35.0% |
| AACAGTAACACTCCTCTTGA+AGG | + | chr4.4:22527893-22527912 | MS.gene32219:CDS | 40.0% | |
| ACTCCCATATTCGAGGAATA+GGG | + | chr4.4:22529281-22529300 | MS.gene32219:intron | 40.0% | |
| AGCTCAGTTCGTTAGATCAT+TGG | + | chr4.4:22528473-22528492 | MS.gene32219:intron | 40.0% | |
| ATGCCTTACCTTGTTAGCAA+TGG | + | chr4.4:22529706-22529725 | MS.gene32219:intron | 40.0% | |
| ATTGTGTGCATATGTTGTGG+AGG | + | chr4.4:22529597-22529616 | MS.gene32219:intron | 40.0% | |
| CAATACGCTAGAGACTAGAA+AGG | + | chr4.4:22529640-22529659 | MS.gene32219:intron | 40.0% | |
| CCACAACATATGCACACAAT+AGG | - | chr4.4:22529597-22529616 | None:intergenic | 40.0% | |
| CCTATTGTGTGCATATGTTG+TGG | + | chr4.4:22529594-22529613 | MS.gene32219:intron | 40.0% | |
| CTAACGCCTAAGGACAAAAA+AGG | - | chr4.4:22528640-22528659 | None:intergenic | 40.0% | |
| CTTCCATTGCTAACAAGGTA+AGG | - | chr4.4:22529712-22529731 | None:intergenic | 40.0% | |
| GACTAAAAAAGGGAAGGACT+TGG | - | chr4.4:22529326-22529345 | None:intergenic | 40.0% | |
| GACTACATGCTTAAGACACT+CGG | - | chr4.4:22528824-22528843 | None:intergenic | 40.0% | |
| GATGCAGGGCCTAAAATTAT+TGG | + | chr4.4:22531261-22531280 | MS.gene32219:CDS | 40.0% | |
| GCTTCTAAACTTGTGCCTTA+AGG | + | chr4.4:22528333-22528352 | MS.gene32219:intron | 40.0% | |
| GGGCCTAAAATTATTGGTGA+AGG | + | chr4.4:22531267-22531286 | MS.gene32219:CDS | 40.0% | |
| GTGAACGTGATGATCTTTAG+AGG | - | chr4.4:22529476-22529495 | None:intergenic | 40.0% | |
| TGCTCTACAAACTTGAACAC+TGG | - | chr4.4:22530673-22530692 | None:intergenic | 40.0% | |
| TGCTTAAGACACTCGGTTAT+CGG | - | chr4.4:22528817-22528836 | None:intergenic | 40.0% | |
| TGTCATACAAAATACCTCGG+GGG | + | chr4.4:22529194-22529213 | MS.gene32219:intron | 40.0% | |
| TGTGAAGTTGAACCTTCAAG+AGG | - | chr4.4:22527908-22527927 | None:intergenic | 40.0% | |
| ! | AAGGGCAAAGTGTTTGAGTA+AGG | - | chr4.4:22529064-22529083 | None:intergenic | 40.0% |
| ! | GGACGCATGAAACAACTTTT+TGG | - | chr4.4:22530504-22530523 | None:intergenic | 40.0% |
| ! | TAGTCATGACTGCTGATTGA+GGG | + | chr4.4:22529341-22529360 | MS.gene32219:intron | 40.0% |
| ! | TTAGTCATGACTGCTGATTG+AGG | + | chr4.4:22529340-22529359 | MS.gene32219:intron | 40.0% |
| !! | CAAGAGGAGTGTTACTGTTA+GGG | - | chr4.4:22527892-22527911 | None:intergenic | 40.0% |
| !! | TCAAGAGGAGTGTTACTGTT+AGG | - | chr4.4:22527893-22527912 | None:intergenic | 40.0% |
| !! | TGGGTCATGTTAACTTGTGT+CGG | + | chr4.4:22528204-22528223 | MS.gene32219:intron | 40.0% |
| !!! | GGCCATTAATTTTTTCTGCC+TGG | + | chr4.4:22530861-22530880 | MS.gene32219:intron | 40.0% |
| !!! | TAAGGGCCTTTTTTGTCCTT+AGG | + | chr4.4:22528631-22528650 | MS.gene32219:intron | 40.0% |
| AAGAAACCTGCAGAAGATGC+AGG | + | chr4.4:22531246-22531265 | MS.gene32219:CDS | 45.0% | |
| AAGATACCTTGCTAAGCAGC+AGG | + | chr4.4:22531435-22531454 | MS.gene32219:CDS | 45.0% | |
| AAGGGCTTGTCATTGACGAA+TGG | + | chr4.4:22531286-22531305 | MS.gene32219:CDS | 45.0% | |
| ACTTGGTCGCATCATGATGT+GGG | - | chr4.4:22529309-22529328 | None:intergenic | 45.0% | |
| AGAAACCTGCAGAAGATGCA+GGG | + | chr4.4:22531247-22531266 | MS.gene32219:CDS | 45.0% | |
| AGATACCTTGCTAAGCAGCA+GGG | + | chr4.4:22531436-22531455 | MS.gene32219:CDS | 45.0% | |
| AGCCACATAGCTTGATTGAG+CGG | + | chr4.4:22529251-22529270 | MS.gene32219:intron | 45.0% | |
| AGGGCTTGTCATTGACGAAT+GGG | + | chr4.4:22531287-22531306 | MS.gene32219:CDS | 45.0% | |
| AGGTACGGAGATCCACTTAA+GGG | - | chr4.4:22528903-22528922 | None:intergenic | 45.0% | |
| AGGTTTCTTCCGTGCTTCAA+GGG | - | chr4.4:22531235-22531254 | None:intergenic | 45.0% | |
| ATCCGCTCAATCAAGCTATG+TGG | - | chr4.4:22529256-22529275 | None:intergenic | 45.0% | |
| ATCCTTGACTCCCATATTCG+AGG | + | chr4.4:22529274-22529293 | MS.gene32219:intron | 45.0% | |
| ATGAGCCAGGAAAACAGGTT+AGG | + | chr4.4:22530096-22530115 | MS.gene32219:CDS | 45.0% | |
| CATATGTTGTGGAGGTTGAG+AGG | + | chr4.4:22529605-22529624 | MS.gene32219:intron | 45.0% | |
| CCAACATAGTGTGGCACAAT+TGG | + | chr4.4:22528791-22528810 | MS.gene32219:intron | 45.0% | |
| CCAATTGTGCCACACTATGT+TGG | - | chr4.4:22528794-22528813 | None:intergenic | 45.0% | |
| CGAGTACTTCTCCTCATGAT+TGG | + | chr4.4:22530012-22530031 | MS.gene32219:intron | 45.0% | |
| CTGCTCATCAAACTGTTTCC+AGG | - | chr4.4:22530882-22530901 | None:intergenic | 45.0% | |
| GACTCCCATATTCGAGGAAT+AGG | + | chr4.4:22529280-22529299 | MS.gene32219:intron | 45.0% | |
| GAGACTAATCCTTCGAGGTA+CGG | - | chr4.4:22528918-22528937 | None:intergenic | 45.0% | |
| GAGCCCTATTCCTCGAATAT+GGG | - | chr4.4:22529287-22529306 | None:intergenic | 45.0% | |
| GGAAAAATTGAAGCGGCAGT+TGG | + | chr4.4:22531194-22531213 | MS.gene32219:CDS | 45.0% | |
| GTAGTCATGTGTTCGATCCA+TGG | + | chr4.4:22528838-22528857 | MS.gene32219:intron | 45.0% | |
| GTCATACAAAATACCTCGGG+GGG | + | chr4.4:22529195-22529214 | MS.gene32219:intron | 45.0% | |
| GTGGGCGAGACATTCAATAT+AGG | + | chr4.4:22531078-22531097 | MS.gene32219:intron | 45.0% | |
| GTTTGATGAGCAGAAAGACC+AGG | + | chr4.4:22530889-22530908 | MS.gene32219:intron | 45.0% | |
| TATATTAGCTGTGACCGAGG+AGG | - | chr4.4:22529436-22529455 | None:intergenic | 45.0% | |
| TCAATCAAGCTATGTGGCTG+TGG | - | chr4.4:22529250-22529269 | None:intergenic | 45.0% | |
| TCATACAAAATACCTCGGGG+GGG | + | chr4.4:22529196-22529215 | MS.gene32219:intron | 45.0% | |
| TGTAGATGAGCCAGGAAAAC+AGG | + | chr4.4:22530091-22530110 | MS.gene32219:intron | 45.0% | |
| TTAGGTTCGGAGTGAGGTTT+GGG | - | chr4.4:22527758-22527777 | None:intergenic | 45.0% | |
| TTCCTCGAATATGGGAGTCA+AGG | - | chr4.4:22529279-22529298 | None:intergenic | 45.0% | |
| ! | AGAGTATCATAGCAACCGGT+AGG | + | chr4.4:22530550-22530569 | MS.gene32219:intron | 45.0% |
| ! | AGTCATGACTGCTGATTGAG+GGG | + | chr4.4:22529342-22529361 | MS.gene32219:intron | 45.0% |
| !! | ACCAAGTTTTAATGGCTGCG+CGG | + | chr4.4:22529823-22529842 | MS.gene32219:intron | 45.0% |
| !! | GGGTCATGTTAACTTGTGTC+GGG | + | chr4.4:22528205-22528224 | MS.gene32219:intron | 45.0% |
| !! | GTACCTCGAAGGATTAGTCT+CGG | + | chr4.4:22528917-22528936 | MS.gene32219:intron | 45.0% |
| !! | TACCTCGAAGGATTAGTCTC+GGG | + | chr4.4:22528918-22528937 | MS.gene32219:intron | 45.0% |
| !!! | AAGGATTAGTCTCGGGCTTT+TGG | + | chr4.4:22528925-22528944 | MS.gene32219:intron | 45.0% |
| AAATCTGCTCAACTGCCACC+TGG | - | chr4.4:22530910-22530929 | None:intergenic | 50.0% | |
| AACAGAAGACGACGTCGTGT+TGG | - | chr4.4:22527831-22527850 | None:intergenic | 50.0% | |
| AAGTCATTCCGCTTCCTCCT+CGG | + | chr4.4:22529419-22529438 | MS.gene32219:intron | 50.0% | |
| AATTGATTACGTCCCCGAGC+TGG | + | chr4.4:22530765-22530784 | MS.gene32219:CDS | 50.0% | |
| ACCCTTGCTAAGCACATCGT+TGG | + | chr4.4:22529514-22529533 | MS.gene32219:intron | 50.0% | |
| AGCTACCTGAGAAGAGCAGA+CGG | + | chr4.4:22529146-22529165 | MS.gene32219:intron | 50.0% | |
| ATACAAAATACCTCGGGGGG+GGG | + | chr4.4:22529198-22529217 | MS.gene32219:intron | 50.0% | |
| CAAACCTCACTCCGAACCTA+AGG | + | chr4.4:22527757-22527776 | MS.gene32219:CDS | 50.0% | |
| CAAACCTTAGGTTCGGAGTG+AGG | - | chr4.4:22527764-22527783 | None:intergenic | 50.0% | |
| CAGGTTTCTTCCGTGCTTCA+AGG | - | chr4.4:22531236-22531255 | None:intergenic | 50.0% | |
| CATACAAAATACCTCGGGGG+GGG | + | chr4.4:22529197-22529216 | MS.gene32219:intron | 50.0% | |
| CCTGGCTCATCTACACAAGA+CGG | - | chr4.4:22530086-22530105 | None:intergenic | 50.0% | |
| CTCACTCCGAACCTAAGGTT+TGG | + | chr4.4:22527762-22527781 | MS.gene32219:CDS | 50.0% | |
| CTCATCTACACAAGACGGAG+AGG | - | chr4.4:22530081-22530100 | None:intergenic | 50.0% | |
| CTTAGGTTCGGAGTGAGGTT+TGG | - | chr4.4:22527759-22527778 | None:intergenic | 50.0% | |
| GAGGTACGGAGATCCACTTA+AGG | - | chr4.4:22528904-22528923 | None:intergenic | 50.0% | |
| GCCAACGATGTGCTTAGCAA+GGG | - | chr4.4:22529518-22529537 | None:intergenic | 50.0% | |
| GGAGCCCTATTCCTCGAATA+TGG | - | chr4.4:22529288-22529307 | None:intergenic | 50.0% | |
| GGTACGGAGATCCACTTAAG+GGG | - | chr4.4:22528902-22528921 | None:intergenic | 50.0% | |
| GTTGCTATGATACTCTCGCC+AGG | - | chr4.4:22530546-22530565 | None:intergenic | 50.0% | |
| TCCGCGCAGCCATTAAAACT+TGG | - | chr4.4:22529827-22529846 | None:intergenic | 50.0% | |
| TGATGAGCAGAAAGACCAGG+TGG | + | chr4.4:22530892-22530911 | MS.gene32219:CDS | 50.0% | |
| TGCCAACGATGTGCTTAGCA+AGG | - | chr4.4:22529519-22529538 | None:intergenic | 50.0% | |
| TGCTAAGCACATCGTTGGCA+TGG | + | chr4.4:22529519-22529538 | MS.gene32219:intron | 50.0% | |
| ! | AGTTGTTTCATGCGTCCTCC+TGG | + | chr4.4:22530507-22530526 | MS.gene32219:CDS | 50.0% |
| ! | GACTTGGTCGCATCATGATG+TGG | - | chr4.4:22529310-22529329 | None:intergenic | 50.0% |
| ! | GCACTCCTAACCTGTTTTCC+TGG | - | chr4.4:22530104-22530123 | None:intergenic | 50.0% |
| ! | GTGAGGTTTGGGTTCAGCTA+CGG | - | chr4.4:22527747-22527766 | None:intergenic | 50.0% |
| !! | AACAGGTTAGGAGTGCCATC+AGG | + | chr4.4:22530108-22530127 | MS.gene32219:CDS | 50.0% |
| !! | ATTAGTCTCGGGCTTTTGGC+CGG | + | chr4.4:22528929-22528948 | MS.gene32219:intron | 50.0% |
| !! | GGCGAGAGTATCATAGCAAC+CGG | + | chr4.4:22530546-22530565 | MS.gene32219:CDS | 50.0% |
| AGAAGACGACGTCGTGTTGG+TGG | - | chr4.4:22527828-22527847 | None:intergenic | 55.0% | |
| AGCCCGAGACTAATCCTTCG+AGG | - | chr4.4:22528923-22528942 | None:intergenic | 55.0% | |
| AGCTTGAGACGACGTCGTGT+TGG | - | chr4.4:22527971-22527990 | None:intergenic | 55.0% | |
| AGTGGATCTCCGTACCTCGA+AGG | + | chr4.4:22528906-22528925 | MS.gene32219:intron | 55.0% | |
| CCGTCTTGTGTAGATGAGCC+AGG | + | chr4.4:22530083-22530102 | MS.gene32219:intron | 55.0% | |
| CGAACTGAGCTAAGCTCACG+TGG | - | chr4.4:22528464-22528483 | None:intergenic | 55.0% | |
| CGAATCCGTCTGCTCTTCTC+AGG | - | chr4.4:22529154-22529173 | None:intergenic | 55.0% | |
| CTGATGCTGCCCTTGAAGCA+CGG | + | chr4.4:22531223-22531242 | MS.gene32219:CDS | 55.0% | |
| GAGCTGGCAACGCATGTTGA+GGG | + | chr4.4:22529387-22529406 | MS.gene32219:intron | 55.0% | |
| GCTTGAGACGACGTCGTGTT+GGG | - | chr4.4:22527970-22527989 | None:intergenic | 55.0% | |
| GGAGAGGTCATCCCCTTAAG+TGG | + | chr4.4:22528888-22528907 | MS.gene32219:intron | 55.0% | |
| TACAAAATACCTCGGGGGGG+GGG | + | chr4.4:22529199-22529218 | MS.gene32219:intron | 55.0% | |
| TCTTTCGTACGCAGCAGCCA+TGG | - | chr4.4:22528858-22528877 | None:intergenic | 55.0% | |
| TGATACTCTCGCCAGGTGCA+AGG | - | chr4.4:22530539-22530558 | None:intergenic | 55.0% | |
| TGGCAACGCATGTTGAGGGA+CGG | + | chr4.4:22529391-22529410 | MS.gene32219:intron | 55.0% | |
| TGGTTACCCATGGCATCCTC+CGG | - | chr4.4:22528951-22528970 | None:intergenic | 55.0% | |
| TTAGGCCCTGCATCTTCTGC+AGG | - | chr4.4:22531255-22531274 | None:intergenic | 55.0% | |
| ! | ACTGCTGATTGAGGGGAGGT+TGG | + | chr4.4:22529349-22529368 | MS.gene32219:intron | 55.0% |
| ! | CATGACTGCTGATTGAGGGG+AGG | + | chr4.4:22529345-22529364 | MS.gene32219:intron | 55.0% |
| ! | TTTTGGCCGGAGGATGCCAT+GGG | + | chr4.4:22528942-22528961 | MS.gene32219:intron | 55.0% |
| ACAAAATACCTCGGGGGGGG+GGG | + | chr4.4:22529200-22529219 | MS.gene32219:intron | 60.0% | |
| ACCCCAAGCACGGGGTCATA+AGG | - | chr4.4:22529083-22529102 | None:intergenic | 60.0% | |
| AGCTGTGACCGAGGAGGAAG+CGG | - | chr4.4:22529430-22529449 | None:intergenic | 60.0% | |
| AGGGGAGGTTGGCGAGAAGA+AGG | + | chr4.4:22529360-22529379 | MS.gene32219:intron | 60.0% | |
| AGGTTGGCGAGAAGAAGGGG+GGG | + | chr4.4:22529365-22529384 | MS.gene32219:intron | 60.0% | |
| CCAGGTGCAAGGATAGCTCC+AGG | - | chr4.4:22530528-22530547 | None:intergenic | 60.0% | |
| CCCCAAGCACGGGGTCATAA+GGG | - | chr4.4:22529082-22529101 | None:intergenic | 60.0% | |
| CCCTTATGACCCCGTGCTTG+GGG | + | chr4.4:22529079-22529098 | MS.gene32219:intron | 60.0% | |
| CCTGGAGCTATCCTTGCACC+TGG | + | chr4.4:22530525-22530544 | MS.gene32219:CDS | 60.0% | |
| CTCACAGGACTTGGACGCTC+TGG | - | chr4.4:22530953-22530972 | None:intergenic | 60.0% | |
| GAGGTTGGCGAGAAGAAGGG+GGG | + | chr4.4:22529364-22529383 | MS.gene32219:intron | 60.0% | |
| GCCCTTATGACCCCGTGCTT+GGG | + | chr4.4:22529078-22529097 | MS.gene32219:intron | 60.0% | |
| GGAGCTGGCAACGCATGTTG+AGG | + | chr4.4:22529386-22529405 | MS.gene32219:intron | 60.0% | |
| GGAGGTTGGCGAGAAGAAGG+GGG | + | chr4.4:22529363-22529382 | MS.gene32219:intron | 60.0% | |
| GGGAGGTTGGCGAGAAGAAG+GGG | + | chr4.4:22529362-22529381 | MS.gene32219:intron | 60.0% | |
| GGGGAGGTTGGCGAGAAGAA+GGG | + | chr4.4:22529361-22529380 | MS.gene32219:intron | 60.0% | |
| GGTACACAGCACCCCAAGCA+CGG | - | chr4.4:22529093-22529112 | None:intergenic | 60.0% | |
| GGTGCAAGGATAGCTCCAGG+AGG | - | chr4.4:22530525-22530544 | None:intergenic | 60.0% | |
| GTACACAGCACCCCAAGCAC+GGG | - | chr4.4:22529092-22529111 | None:intergenic | 60.0% | |
| TACACAGCACCCCAAGCACG+GGG | - | chr4.4:22529091-22529110 | None:intergenic | 60.0% | |
| TGCCCTTATGACCCCGTGCT+TGG | + | chr4.4:22529077-22529096 | MS.gene32219:intron | 60.0% | |
| TGCTAAGCAGCAGGGCGATG+TGG | + | chr4.4:22531444-22531463 | MS.gene32219:CDS | 60.0% | |
| ! | AGCAGACGGATTCGCCACGT+AGG | + | chr4.4:22529160-22529179 | MS.gene32219:intron | 60.0% |
| ! | CATCGCCCTGCTGCTTAGCA+AGG | - | chr4.4:22531444-22531463 | None:intergenic | 60.0% |
| ! | CTTTTGGCCGGAGGATGCCA+TGG | + | chr4.4:22528941-22528960 | MS.gene32219:intron | 60.0% |
| AAAATACCTCGGGGGGGGGG+GGG | + | chr4.4:22529202-22529221 | MS.gene32219:intron | 65.0% | |
| ACATCCTGGCCTCGCCTACG+TGG | - | chr4.4:22529177-22529196 | None:intergenic | 65.0% | |
| ACGGATTCGCCACGTAGGCG+AGG | + | chr4.4:22529165-22529184 | MS.gene32219:intron | 65.0% | |
| CAAAATACCTCGGGGGGGGG+GGG | + | chr4.4:22529201-22529220 | MS.gene32219:intron | 65.0% | |
| ! | AGTCTCGGGCTTTTGGCCGG+AGG | + | chr4.4:22528932-22528951 | MS.gene32219:intron | 65.0% |
| AAATACCTCGGGGGGGGGGG+GGG | + | chr4.4:22529203-22529222 | MS.gene32219:intron | 70.0% | |
| GCGAGAAGAAGGGGGGGAGC+TGG | + | chr4.4:22529371-22529390 | MS.gene32219:intron | 70.0% | |
| TTCGCCACGTAGGCGAGGCC+AGG | + | chr4.4:22529170-22529189 | MS.gene32219:intron | 70.0% | |
| AATACCTCGGGGGGGGGGGG+GGG | + | chr4.4:22529204-22529223 | MS.gene32219:intron | 75.0% | |
| ! | ATACCTCGGGGGGGGGGGGG+GGG | + | chr4.4:22529205-22529224 | MS.gene32219:intron | 80.0% |
| ! | TACCTCGGGGGGGGGGGGGG+GGG | + | chr4.4:22529206-22529225 | MS.gene32219:intron | 85.0% |
| ! | ACCTCGGGGGGGGGGGGGGG+GGG | + | chr4.4:22529207-22529226 | MS.gene32219:intron | 90.0% |
| ! | CCTCGGGGGGGGGGGGGGGG+GGG | + | chr4.4:22529208-22529227 | MS.gene32219:intron | 95.0% |
| ! | CTCGGGGGGGGGGGGGGGGG+GGG | + | chr4.4:22529209-22529228 | MS.gene32219:intron | 95.0% |
| ! | GGGGGGGGGGGGGAGGGGGG+GGG | + | chr4.4:22529223-22529242 | MS.gene32219:intron | 95.0% |
| ! | GGGGGGGGGGGGGGAGGGGG+GGG | + | chr4.4:22529222-22529241 | MS.gene32219:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGAGGGG+GGG | + | chr4.4:22529221-22529240 | MS.gene32219:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGAGGG+GGG | + | chr4.4:22529220-22529239 | MS.gene32219:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGAGG+GGG | + | chr4.4:22529219-22529238 | MS.gene32219:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGAG+GGG | + | chr4.4:22529218-22529237 | MS.gene32219:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGGA+GGG | + | chr4.4:22529217-22529236 | MS.gene32219:intron | 95.0% |
| ! | TCGGGGGGGGGGGGGGGGGG+GGG | + | chr4.4:22529210-22529229 | MS.gene32219:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22527740 | 22531483 | 22527740 | ID=MS.gene32219 |
| chr4.4 | mRNA | 22527740 | 22531483 | 22527740 | ID=MS.gene32219.t1;Parent=MS.gene32219 |
| chr4.4 | exon | 22527740 | 22528019 | 22527740 | ID=MS.gene32219.t1.exon1;Parent=MS.gene32219.t1 |
| chr4.4 | CDS | 22527740 | 22528019 | 22527740 | ID=cds.MS.gene32219.t1;Parent=MS.gene32219.t1 |
| chr4.4 | exon | 22530096 | 22530166 | 22530096 | ID=MS.gene32219.t1.exon2;Parent=MS.gene32219.t1 |
| chr4.4 | CDS | 22530096 | 22530166 | 22530096 | ID=cds.MS.gene32219.t1;Parent=MS.gene32219.t1 |
| chr4.4 | exon | 22530486 | 22530567 | 22530486 | ID=MS.gene32219.t1.exon3;Parent=MS.gene32219.t1 |
| chr4.4 | CDS | 22530486 | 22530567 | 22530486 | ID=cds.MS.gene32219.t1;Parent=MS.gene32219.t1 |
| chr4.4 | exon | 22530674 | 22530786 | 22530674 | ID=MS.gene32219.t1.exon4;Parent=MS.gene32219.t1 |
| chr4.4 | CDS | 22530674 | 22530786 | 22530674 | ID=cds.MS.gene32219.t1;Parent=MS.gene32219.t1 |
| chr4.4 | exon | 22530890 | 22530967 | 22530890 | ID=MS.gene32219.t1.exon5;Parent=MS.gene32219.t1 |
| chr4.4 | CDS | 22530890 | 22530967 | 22530890 | ID=cds.MS.gene32219.t1;Parent=MS.gene32219.t1 |
| chr4.4 | exon | 22531189 | 22531308 | 22531189 | ID=MS.gene32219.t1.exon6;Parent=MS.gene32219.t1 |
| chr4.4 | CDS | 22531189 | 22531308 | 22531189 | ID=cds.MS.gene32219.t1;Parent=MS.gene32219.t1 |
| chr4.4 | exon | 22531421 | 22531483 | 22531421 | ID=MS.gene32219.t1.exon7;Parent=MS.gene32219.t1 |
| chr4.4 | CDS | 22531421 | 22531483 | 22531421 | ID=cds.MS.gene32219.t1;Parent=MS.gene32219.t1 |
| Gene Sequence |
| Protein sequence |
