Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052570.t1 | XP_003608266.1 | 98.9 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 6.70E-125 | 456.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052570.t1 | Q8VYN2 | 83.6 | 195 | 30 | 1 | 68 | 260 | 96 | 290 | 2.5e-88 | 326.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052570.t1 | Q2HTV7 | 98.9 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 4.8e-125 | 456.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050961 | MS.gene052570 | 0.84776 | 9.43E-60 | -1.69E-46 |
| MS.gene051959 | MS.gene052570 | 0.826633 | 2.44E-54 | -1.69E-46 |
| MS.gene051960 | MS.gene052570 | 0.835965 | 1.23E-56 | -1.69E-46 |
| MS.gene052570 | MS.gene053601 | 0.80156 | 8.50E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene054490 | 0.81145 | 6.96E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene057001 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene059698 | 0.822252 | 2.62E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene060522 | 0.822032 | 2.94E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene061729 | 0.806806 | 6.88E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene062288 | 0.825442 | 4.68E-54 | -1.69E-46 |
| MS.gene052570 | MS.gene063094 | 0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene063691 | 0.82555 | 4.41E-54 | -1.69E-46 |
| MS.gene052570 | MS.gene065380 | 0.811351 | 7.31E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene06543 | 0.800434 | 1.44E-48 | -1.69E-46 |
| MS.gene052570 | MS.gene065509 | 0.839571 | 1.46E-57 | -1.69E-46 |
| MS.gene052570 | MS.gene065510 | 0.836294 | 1.02E-56 | -1.69E-46 |
| MS.gene052570 | MS.gene066330 | 0.842211 | 2.97E-58 | -1.69E-46 |
| MS.gene052570 | MS.gene066630 | 0.813699 | 2.24E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene066879 | 0.82802 | 1.13E-54 | -1.69E-46 |
| MS.gene052570 | MS.gene067785 | 0.804513 | 2.08E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene068282 | 0.813882 | 2.04E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene070025 | 0.82191 | 3.14E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene071703 | 0.826254 | 3.00E-54 | -1.69E-46 |
| MS.gene052570 | MS.gene071947 | 0.805734 | 1.16E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene071949 | 0.815453 | 9.17E-52 | -1.69E-46 |
| MS.gene052570 | MS.gene072560 | 0.815926 | 7.20E-52 | -1.69E-46 |
| MS.gene052570 | MS.gene07450 | 0.804053 | 2.60E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene20353 | 0.821342 | 4.25E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene22661 | 0.808476 | 3.04E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene24408 | 0.823426 | 1.39E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene25379 | 0.802502 | 5.44E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene25530 | 0.802826 | 4.67E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene31091 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene31861 | 0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene052570 | MS.gene32182 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene32187 | 0.816384 | 5.69E-52 | -1.69E-46 |
| MS.gene052570 | MS.gene32219 | 0.848097 | 7.61E-60 | -1.69E-46 |
| MS.gene052570 | MS.gene33741 | 0.823597 | 1.27E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene33742 | 0.830634 | 2.63E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene36268 | 0.819391 | 1.19E-52 | -1.69E-46 |
| MS.gene052570 | MS.gene38759 | 0.811637 | 6.34E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene39401 | 0.82105 | 4.96E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene39406 | 0.805384 | 1.37E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene39641 | 0.813881 | 2.04E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene41704 | 0.808137 | 3.59E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene43937 | 0.820575 | 6.38E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene44854 | 0.801727 | 7.85E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene45115 | 0.831213 | 1.90E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene45552 | 0.820735 | 5.86E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene49911 | 0.812223 | 4.72E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene51143 | -0.850825 | 1.32E-60 | -1.69E-46 |
| MS.gene052570 | MS.gene51894 | 0.808305 | 3.31E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene51935 | 0.803126 | 4.05E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene54123 | 0.80711 | 5.93E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene54952 | 0.811918 | 5.51E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene56507 | 0.800849 | 1.19E-48 | -1.69E-46 |
| MS.gene052570 | MS.gene56769 | 0.837584 | 4.77E-57 | -1.69E-46 |
| MS.gene052570 | MS.gene58248 | 0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene61746 | 0.813802 | 2.13E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene63869 | 0.803407 | 3.54E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene65364 | 0.807727 | 4.39E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene67131 | 0.82287 | 1.88E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene67631 | 0.813993 | 1.93E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene68141 | 0.80612 | 9.60E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene68617 | 0.835363 | 1.75E-56 | -1.69E-46 |
| MS.gene052570 | MS.gene69239 | 0.800275 | 1.56E-48 | -1.69E-46 |
| MS.gene052570 | MS.gene69852 | 0.837265 | 5.75E-57 | -1.69E-46 |
| MS.gene052570 | MS.gene69933 | 0.817759 | 2.79E-52 | -1.69E-46 |
| MS.gene052570 | MS.gene70341 | 0.823424 | 1.40E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene73236 | 0.807021 | 6.19E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene73393 | 0.836044 | 1.18E-56 | -1.69E-46 |
| MS.gene052570 | MS.gene73644 | 0.837556 | 4.85E-57 | -1.69E-46 |
| MS.gene052570 | MS.gene75049 | 0.802647 | 5.08E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene76159 | 0.830648 | 2.61E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene76423 | 0.800257 | 1.57E-48 | -1.69E-46 |
| MS.gene052570 | MS.gene77020 | 0.833635 | 4.76E-56 | -1.69E-46 |
| MS.gene052570 | MS.gene78366 | 0.812442 | 4.23E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene84703 | 0.843688 | 1.20E-58 | -1.69E-46 |
| MS.gene052570 | MS.gene84733 | 0.830348 | 3.09E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene84734 | 0.829953 | 3.86E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene84866 | 0.829144 | 6.07E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene87334 | 0.803688 | 3.09E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene89702 | 0.819732 | 9.95E-53 | -1.69E-46 |
| MS.gene052570 | MS.gene90556 | 0.817854 | 2.66E-52 | -1.69E-46 |
| MS.gene052570 | MS.gene92076 | 0.813578 | 2.38E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene92396 | 0.805364 | 1.38E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene93160 | 0.804142 | 2.49E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene98636 | 0.828689 | 7.82E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene99191 | 0.808487 | 3.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052570.t1 | MTR_4g091470 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 539 |
| MS.gene052570.t1 | MTR_2g089995 | 69.004 | 271 | 79 | 3 | 1 | 266 | 1 | 271 | 1.88e-113 | 327 |
| MS.gene052570.t1 | MTR_2g081140 | 72.273 | 220 | 57 | 3 | 50 | 266 | 25 | 243 | 8.30e-104 | 301 |
| MS.gene052570.t1 | MTR_2g089995 | 66.351 | 211 | 67 | 2 | 1 | 207 | 1 | 211 | 7.23e-85 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052570.t1 | AT4G21450 | 64.527 | 296 | 74 | 5 | 1 | 266 | 1 | 295 | 1.86e-123 | 353 |
| MS.gene052570.t1 | AT4G21450 | 60.317 | 315 | 75 | 6 | 1 | 266 | 1 | 314 | 9.32e-118 | 340 |
| MS.gene052570.t1 | AT4G05060 | 64.789 | 284 | 77 | 5 | 1 | 261 | 1 | 284 | 9.20e-109 | 316 |
| MS.gene052570.t1 | AT5G54110 | 65.339 | 251 | 79 | 4 | 16 | 262 | 16 | 262 | 3.19e-101 | 296 |
| MS.gene052570.t1 | AT4G21450 | 58.571 | 210 | 57 | 4 | 1 | 180 | 1 | 210 | 4.75e-70 | 215 |
| MS.gene052570.t1 | AT5G54110 | 62.130 | 169 | 56 | 4 | 16 | 180 | 16 | 180 | 9.31e-52 | 167 |
Find 57 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATCTAATGTAGCATTTA+AGG | 0.154803 | 4.3:+22637387 | MS.gene052570:CDS |
| AAATGCTACATTAGATTTAC+TGG | 0.228582 | 4.3:-22637383 | None:intergenic |
| CAGGTTTCTTCCGTGCTTCA+AGG | 0.310647 | 4.3:-22638475 | None:intergenic |
| TCAAGAGGAGTGTTACTGTT+AGG | 0.327375 | 4.3:-22635128 | None:intergenic |
| GGAAAGTAAAGTTTGTTAGA+AGG | 0.376948 | 4.3:-22635233 | None:intergenic |
| TTAGGTTCGGAGTGAGGTTT+CGG | 0.388073 | 4.3:-22634999 | None:intergenic |
| CAAGAGGAGTGTTACTGTTA+GGG | 0.393536 | 4.3:-22635127 | None:intergenic |
| TAAAATTATCTAACCAGCTC+GGG | 0.398885 | 4.3:-22638020 | None:intergenic |
| TGTAGATGAGCCAGGAAAAC+AGG | 0.420800 | 4.3:+22637333 | MS.gene052570:intron |
| ATTTAAAATCATGAGTTTGA+AGG | 0.426290 | 4.3:+22637974 | MS.gene052570:CDS |
| TTGAAGAAATTCCAAACCTT+AGG | 0.429466 | 4.3:-22635017 | None:intergenic |
| TTAGGCCCTGCATCTTCTGC+AGG | 0.429473 | 4.3:-22638494 | None:intergenic |
| CTCACAGGACTTGGACGCTC+TGG | 0.438074 | 4.3:-22638192 | None:intergenic |
| AACAGTAACACTCCTCTTGA+AGG | 0.439501 | 4.3:+22635131 | MS.gene052570:CDS |
| AGTTGTTTCATGCGTCCTCC+TGG | 0.445612 | 4.3:+22637749 | MS.gene052570:CDS |
| GAAATTCCAAACCTTAGGTT+CGG | 0.448162 | 4.3:-22635012 | None:intergenic |
| AGCTTGAGACGACGTCGTGC+TGG | 0.451902 | 4.3:-22635206 | None:intergenic |
| CTCACTCCGAACCTAAGGTT+TGG | 0.454205 | 4.3:+22635006 | MS.gene052570:CDS |
| ATGAGCCAGGAAAACAGGTT+AGG | 0.467951 | 4.3:+22637338 | MS.gene052570:CDS |
| AAGATACCTTGCTAAGCAGC+AGG | 0.483964 | 4.3:+22638679 | MS.gene052570:CDS |
| GATGCAGGGCCTAAAATTAT+CGG | 0.484695 | 4.3:+22638503 | MS.gene052570:CDS |
| AGAAGACGACGTCGTGTTGG+TGG | 0.485495 | 4.3:-22635069 | None:intergenic |
| AAGAAACCTGCAGAAGATGC+AGG | 0.486887 | 4.3:+22638488 | MS.gene052570:CDS |
| GGCGAGAGTATCATAGCAAC+CGG | 0.491969 | 4.3:+22637788 | MS.gene052570:CDS |
| CCGTCTTGTGTAGATGAGCC+AGG | 0.506060 | 4.3:+22637325 | MS.gene052570:intron |
| ATAAAATTATCTAACCAGCT+CGG | 0.529735 | 4.3:-22638021 | None:intergenic |
| ATCATGAGTTTGAAGGTCAA+AGG | 0.531786 | 4.3:+22637981 | MS.gene052570:CDS |
| AATTGATTACGTCCCCGAGC+TGG | 0.536261 | 4.3:+22638007 | MS.gene052570:CDS |
| TTTCGGTTCAGCTACGGCCA+TGG | 0.537829 | 4.3:-22634982 | None:intergenic |
| GGGCCTAAAATTATCGGTGA+AGG | 0.540036 | 4.3:+22638509 | MS.gene052570:CDS |
| GTGAGGTTTCGGTTCAGCTA+CGG | 0.540703 | 4.3:-22634988 | None:intergenic |
| AACAGGTTAGGAGTGCCATC+AGG | 0.542734 | 4.3:+22637350 | MS.gene052570:CDS |
| GCTTGAGACGACGTCGTGCT+GGG | 0.544409 | 4.3:-22635205 | None:intergenic |
| AACAGAAGACGACGTCGTGT+TGG | 0.544962 | 4.3:-22635072 | None:intergenic |
| GAAGTGTTAGAATTGCGAAA+AGG | 0.547722 | 4.3:-22635044 | None:intergenic |
| AGGGCTTGTCATTGACGAAT+GGG | 0.556311 | 4.3:+22638529 | MS.gene052570:CDS |
| CCAGGTGCAAGGATAGCTCC+AGG | 0.557167 | 4.3:-22637767 | None:intergenic |
| GAAACCTCACTCCGAACCTA+AGG | 0.559139 | 4.3:+22635001 | MS.gene052570:CDS |
| AAATCTGCTCAACTGCCACC+TGG | 0.560385 | 4.3:-22638149 | None:intergenic |
| CCTGGAGCTATCCTTGCACC+TGG | 0.563540 | 4.3:+22637767 | MS.gene052570:CDS |
| AGGTTTCTTCCGTGCTTCAA+GGG | 0.567437 | 4.3:-22638474 | None:intergenic |
| TGATACTCTCGCCAGGTGCA+AGG | 0.572027 | 4.3:-22637778 | None:intergenic |
| GTTGCTATGATACTCTCGCC+AGG | 0.577145 | 4.3:-22637785 | None:intergenic |
| CATCGCCCTGCTGCTTAGCA+AGG | 0.579673 | 4.3:-22638685 | None:intergenic |
| AAGGGCTTGTCATTGACGAA+TGG | 0.585970 | 4.3:+22638528 | MS.gene052570:CDS |
| CAAACCTTAGGTTCGGAGTG+AGG | 0.596942 | 4.3:-22635005 | None:intergenic |
| CTGATGCTGCCCTTGAAGCA+CGG | 0.601872 | 4.3:+22638465 | MS.gene052570:CDS |
| TGCTAAGCAGCAGGGCGATG+TGG | 0.604162 | 4.3:+22638688 | MS.gene052570:CDS |
| GGCCTAAAATTATCGGTGAA+GGG | 0.609230 | 4.3:+22638510 | MS.gene052570:CDS |
| AATGAAAAGCCAGAAAAGAG+TGG | 0.610602 | 4.3:+22637945 | MS.gene052570:CDS |
| AGAAACCTGCAGAAGATGCA+GGG | 0.611107 | 4.3:+22638489 | MS.gene052570:CDS |
| GTTTGATGAGCAGAAAGACC+AGG | 0.616359 | 4.3:+22638131 | MS.gene052570:intron |
| TGTGAAGTTGAACCTTCAAG+AGG | 0.629338 | 4.3:-22635143 | None:intergenic |
| AGATACCTTGCTAAGCAGCA+GGG | 0.656370 | 4.3:+22638680 | MS.gene052570:CDS |
| AAAATTATCTAACCAGCTCG+GGG | 0.659211 | 4.3:-22638019 | None:intergenic |
| TGATGAGCAGAAAGACCAGG+TGG | 0.693468 | 4.3:+22638134 | MS.gene052570:CDS |
| GGTGCAAGGATAGCTCCAGG+AGG | 0.793325 | 4.3:-22637764 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTCAATTTAATTAGA+GGG | + | chr4.3:22635376-22635395 | MS.gene052570:intron | 10.0% |
| ! | CCCCCCCCCCCCCCCCCCCC+CGG | - | chr4.3:22636462-22636481 | None:intergenic | 100.0% |
| ! | CCCCCCCCCCCCCCCCCCGG+AGG | - | chr4.3:22636460-22636479 | None:intergenic | 100.0% |
| ! | CCGGGGGGGGGGGGGGGGGG+GGG | + | chr4.3:22636460-22636479 | MS.gene052570:intron | 100.0% |
| !! | AATGTTACATGATAATAAAT+AGG | - | chr4.3:22637444-22637463 | None:intergenic | 15.0% |
| !! | AATTGATTGTATATTACTTA+TGG | + | chr4.3:22638386-22638405 | MS.gene052570:intron | 15.0% |
| !! | ATGTTACATGATAATAAATA+GGG | - | chr4.3:22637443-22637462 | None:intergenic | 15.0% |
| !! | ATTGATTGTATATTACTTAT+GGG | + | chr4.3:22638387-22638406 | MS.gene052570:intron | 15.0% |
| !! | GTTTATTTCAATTTAATTAG+AGG | + | chr4.3:22635375-22635394 | MS.gene052570:intron | 15.0% |
| !!! | AAGATCGTTTTATTATTTTT+TGG | - | chr4.3:22636220-22636239 | None:intergenic | 15.0% |
| !!! | ATCTATAACTATAAACTTTT+GGG | + | chr4.3:22635431-22635450 | MS.gene052570:intron | 15.0% |
| !!! | ATTTTTCTTCATTAAGATTT+TGG | + | chr4.3:22638415-22638434 | MS.gene052570:intron | 15.0% |
| !!! | TATCTATAACTATAAACTTT+TGG | + | chr4.3:22635430-22635449 | MS.gene052570:intron | 15.0% |
| !!! | TTATTTAGATTTGTTTTCTA+AGG | + | chr4.3:22638082-22638101 | MS.gene052570:intron | 15.0% |
| !! | AAACCAGATAAAAAAGTTTA+GGG | - | chr4.3:22635623-22635642 | None:intergenic | 20.0% |
| !! | AAGCTAGTATAATAAATACA+AGG | + | chr4.3:22637857-22637876 | MS.gene052570:intron | 20.0% |
| !! | ATATAAAGACGTATTAAGTA+GGG | - | chr4.3:22637505-22637524 | None:intergenic | 20.0% |
| !! | GTATGCAATTTAATTGTTAT+TGG | + | chr4.3:22635298-22635317 | MS.gene052570:intron | 20.0% |
| !! | TAAACCAGATAAAAAAGTTT+AGG | - | chr4.3:22635624-22635643 | None:intergenic | 20.0% |
| !! | TAAATCTAATGTAGCATTTA+AGG | + | chr4.3:22637387-22637406 | MS.gene052570:CDS | 20.0% |
| !! | TCAATTTCCATACATTATAA+GGG | + | chr4.3:22635862-22635881 | MS.gene052570:intron | 20.0% |
| !! | TGTTACATGATAATAAATAG+GGG | - | chr4.3:22637442-22637461 | None:intergenic | 20.0% |
| !! | TTATAATGTATGGAAATTGA+GGG | - | chr4.3:22635862-22635881 | None:intergenic | 20.0% |
| !!! | AAACTGTAAATTTTGAAAGT+AGG | + | chr4.3:22637088-22637107 | MS.gene052570:intron | 20.0% |
| !!! | AATTATCTGTTACTTTATTG+TGG | + | chr4.3:22638301-22638320 | MS.gene052570:intron | 20.0% |
| !!! | ATTATCTGTTACTTTATTGT+GGG | + | chr4.3:22638302-22638321 | MS.gene052570:intron | 20.0% |
| !!! | ATTTAAAATCATGAGTTTGA+AGG | + | chr4.3:22637974-22637993 | MS.gene052570:CDS | 20.0% |
| !!! | CCATATATGATTTTAGTTTT+GGG | + | chr4.3:22635952-22635971 | MS.gene052570:intron | 20.0% |
| !!! | TCCATATATGATTTTAGTTT+TGG | + | chr4.3:22635951-22635970 | MS.gene052570:intron | 20.0% |
| !!! | TGTATTTATTATACTAGCTT+AGG | - | chr4.3:22637857-22637876 | None:intergenic | 20.0% |
| !!! | TTCAGTGTACTTTTTTATTT+GGG | + | chr4.3:22638225-22638244 | MS.gene052570:intron | 20.0% |
| !!! | TTTCAGTGTACTTTTTTATT+TGG | + | chr4.3:22638224-22638243 | MS.gene052570:intron | 20.0% |
| ! | AAAATTTAGTTAGAGAACGA+TGG | + | chr4.3:22635928-22635947 | MS.gene052570:intron | 25.0% |
| ! | AAATGCTACATTAGATTTAC+TGG | - | chr4.3:22637386-22637405 | None:intergenic | 25.0% |
| ! | AATACTTTGTGAAGTAGTAT+TGG | - | chr4.3:22635797-22635816 | None:intergenic | 25.0% |
| ! | ACTAAGCAGTTAAATTTGAA+TGG | + | chr4.3:22636914-22636933 | MS.gene052570:intron | 25.0% |
| ! | ATAAAATTATCTAACCAGCT+CGG | - | chr4.3:22638024-22638043 | None:intergenic | 25.0% |
| ! | ATTACTGTACACGTAATTTA+TGG | + | chr4.3:22636786-22636805 | MS.gene052570:intron | 25.0% |
| ! | CAAAAATATGTTACTGCATT+TGG | + | chr4.3:22635559-22635578 | MS.gene052570:intron | 25.0% |
| ! | CATATAAAGACGTATTAAGT+AGG | - | chr4.3:22637506-22637525 | None:intergenic | 25.0% |
| ! | CCCAAAACTAAAATCATATA+TGG | - | chr4.3:22635955-22635974 | None:intergenic | 25.0% |
| ! | CCTATATTCTAAATTAGTGT+TGG | + | chr4.3:22637663-22637682 | MS.gene052570:intron | 25.0% |
| ! | CTCAATTTCCATACATTATA+AGG | + | chr4.3:22635861-22635880 | MS.gene052570:intron | 25.0% |
| ! | CTTATAATGTATGGAAATTG+AGG | - | chr4.3:22635863-22635882 | None:intergenic | 25.0% |
| ! | GTCACAGCTAATATAAATTA+GGG | + | chr4.3:22636680-22636699 | MS.gene052570:intron | 25.0% |
| ! | GTTACATGATAATAAATAGG+GGG | - | chr4.3:22637441-22637460 | None:intergenic | 25.0% |
| ! | TAGTAAAAGTAAGAATAGAC+AGG | - | chr4.3:22637587-22637606 | None:intergenic | 25.0% |
| ! | TATAAAGACGTATTAAGTAG+GGG | - | chr4.3:22637504-22637523 | None:intergenic | 25.0% |
| !! | ATAAAACGATCTTTTCTCTT+TGG | + | chr4.3:22636227-22636246 | MS.gene052570:intron | 25.0% |
| !! | CAAATGCAGTAACATATTTT+TGG | - | chr4.3:22635561-22635580 | None:intergenic | 25.0% |
| !! | CCAACACTAATTTAGAATAT+AGG | - | chr4.3:22637666-22637685 | None:intergenic | 25.0% |
| !! | CTAAAAGTACATACAACATT+AGG | - | chr4.3:22637171-22637190 | None:intergenic | 25.0% |
| !! | CTAATGTTGTATGTACTTTT+AGG | + | chr4.3:22637169-22637188 | MS.gene052570:intron | 25.0% |
| !! | CTTTCTGAAAAAACATAATC+AGG | - | chr4.3:22638649-22638668 | None:intergenic | 25.0% |
| !! | GCTTTCAATTTTTCCATTTT+CGG | - | chr4.3:22635821-22635840 | None:intergenic | 25.0% |
| !! | TAAAACGATCTTTTCTCTTT+GGG | + | chr4.3:22636228-22636247 | MS.gene052570:intron | 25.0% |
| !! | TTCTCTACATATTCTTTTCT+GGG | + | chr4.3:22637826-22637845 | MS.gene052570:intron | 25.0% |
| !! | TTTCTCTACATATTCTTTTC+TGG | + | chr4.3:22637825-22637844 | MS.gene052570:intron | 25.0% |
| !!! | ACTAAGATACCAAGTTTTAA+TGG | + | chr4.3:22637057-22637076 | MS.gene052570:intron | 25.0% |
| !!! | AGATTTTGGAAAAATTGAAG+CGG | + | chr4.3:22638429-22638448 | MS.gene052570:intron | 25.0% |
| !!! | CTGAAATTTTTTTTACTCAC+AGG | - | chr4.3:22638210-22638229 | None:intergenic | 25.0% |
| !!! | TATTATTTTTTGGTTACCCA+TGG | - | chr4.3:22636210-22636229 | None:intergenic | 25.0% |
| !!! | TTATGTTTTTTCAGAAAGAG+AGG | + | chr4.3:22638651-22638670 | MS.gene052570:intron | 25.0% |
| !!! | TTTCCCTAAACTTTTTTATC+TGG | + | chr4.3:22635617-22635636 | MS.gene052570:intron | 25.0% |
| !!! | TTTTAGGTCCATAAATACAT+AGG | + | chr4.3:22637185-22637204 | MS.gene052570:intron | 25.0% |
| !!! | TTTTATTTGGGCAATTTTTG+TGG | + | chr4.3:22638237-22638256 | MS.gene052570:intron | 25.0% |
| AAAAAGGCCCTTATAATGTA+TGG | - | chr4.3:22635872-22635891 | None:intergenic | 30.0% | |
| AAGTAGGGGAATAAATAAAC+AGG | - | chr4.3:22637490-22637509 | None:intergenic | 30.0% | |
| AGATTAAAATCTAACGCCTA+AGG | - | chr4.3:22635898-22635917 | None:intergenic | 30.0% | |
| AGCTGTCGTAACTATTATAA+CGG | - | chr4.3:22636363-22636382 | None:intergenic | 30.0% | |
| ATCAGAGAAGACAACATTTA+AGG | + | chr4.3:22636273-22636292 | MS.gene052570:intron | 30.0% | |
| CATATAGTACATTCATCACT+TGG | - | chr4.3:22635993-22636012 | None:intergenic | 30.0% | |
| CTAATATAAATTAGGGAGCA+AGG | + | chr4.3:22636687-22636706 | MS.gene052570:intron | 30.0% | |
| GAACAAAATTGAGTAAGAGA+AGG | - | chr4.3:22637293-22637312 | None:intergenic | 30.0% | |
| GAATTCTTGCCTGTTTAAAA+AGG | + | chr4.3:22635644-22635663 | MS.gene052570:intron | 30.0% | |
| GGTCACAGCTAATATAAATT+AGG | + | chr4.3:22636679-22636698 | MS.gene052570:intron | 30.0% | |
| TAAAATTATCTAACCAGCTC+GGG | - | chr4.3:22638023-22638042 | None:intergenic | 30.0% | |
| TAAATACATAGGCAGATTCA+TGG | + | chr4.3:22637196-22637215 | MS.gene052570:intron | 30.0% | |
| TAAATAGGGGGTAAATAAAC+AGG | - | chr4.3:22637429-22637448 | None:intergenic | 30.0% | |
| TGAAAGTAGGTCAAACAAAT+GGG | + | chr4.3:22637101-22637120 | MS.gene052570:intron | 30.0% | |
| TGAATCTGCCTATGTATTTA+TGG | - | chr4.3:22637196-22637215 | None:intergenic | 30.0% | |
| TTCCAGGCAGAAAAAATTAA+TGG | - | chr4.3:22638108-22638127 | None:intergenic | 30.0% | |
| TTGAAAGTAGGTCAAACAAA+TGG | + | chr4.3:22637100-22637119 | MS.gene052570:intron | 30.0% | |
| TTGAAGAAATTCCAAACCTT+AGG | - | chr4.3:22635020-22635039 | None:intergenic | 30.0% | |
| ! | AACATTTAAGGTCAGTGTTA+AGG | + | chr4.3:22636285-22636304 | MS.gene052570:intron | 30.0% |
| ! | CAAATTGCAATACTCACTTT+TGG | + | chr4.3:22638591-22638610 | MS.gene052570:intron | 30.0% |
| ! | CTAATGTAGCATTTAAGGTA+TGG | + | chr4.3:22637392-22637411 | MS.gene052570:intron | 30.0% |
| ! | TATGATGATGATGATGATGA+AGG | - | chr4.3:22635106-22635125 | None:intergenic | 30.0% |
| ! | TCAACCATTCCTTTTTAAAC+AGG | - | chr4.3:22635656-22635675 | None:intergenic | 30.0% |
| ! | TCACAAAGTATTTCCGAAAA+TGG | + | chr4.3:22635805-22635824 | MS.gene052570:intron | 30.0% |
| ! | TTCTTTTTACCAACATAGTG+TGG | + | chr4.3:22636031-22636050 | MS.gene052570:intron | 30.0% |
| !! | GGAAAGTAAAGTTTGTTAGA+AGG | - | chr4.3:22635236-22635255 | None:intergenic | 30.0% |
| !!! | TATGATTTTAGTTTTGGGTC+AGG | + | chr4.3:22635957-22635976 | MS.gene052570:intron | 30.0% |
| !!! | TCTGGCTTTTCATTATTTTC+TGG | - | chr4.3:22637939-22637958 | None:intergenic | 30.0% |
| !!! | TTTTTTTTACTCACAGGACT+TGG | - | chr4.3:22638204-22638223 | None:intergenic | 30.0% |
| AAAATTATCTAACCAGCTCG+GGG | - | chr4.3:22638022-22638041 | None:intergenic | 35.0% | |
| AAATGAGCAGCATACATACA+AGG | - | chr4.3:22635257-22635276 | None:intergenic | 35.0% | |
| AACTAGTGCAGAAAGAACAA+AGG | - | chr4.3:22638276-22638295 | None:intergenic | 35.0% | |
| AATGAAAAGCCAGAAAAGAG+TGG | + | chr4.3:22637945-22637964 | MS.gene052570:CDS | 35.0% | |
| AGAAATCGAATATTGCCTAC+CGG | - | chr4.3:22637810-22637829 | None:intergenic | 35.0% | |
| AGCAGTCATGTGACTAAAAA+AGG | - | chr4.3:22636574-22636593 | None:intergenic | 35.0% | |
| AGTAACTTCCATTGCTAACA+AGG | - | chr4.3:22636956-22636975 | None:intergenic | 35.0% | |
| ATCATGAGTTTGAAGGTCAA+AGG | + | chr4.3:22637981-22638000 | MS.gene052570:CDS | 35.0% | |
| ATGTCATACAAAATACCTCC+GGG | + | chr4.3:22636442-22636461 | MS.gene052570:intron | 35.0% | |
| ATGTTGTCTTCTCTGATTGA+CGG | - | chr4.3:22636270-22636289 | None:intergenic | 35.0% | |
| ATTTATATTAGCTGTGACCG+AGG | - | chr4.3:22636678-22636697 | None:intergenic | 35.0% | |
| CTTCTAAACTTGTGCCTTAA+GGG | + | chr4.3:22635582-22635601 | MS.gene052570:intron | 35.0% | |
| CTTGCCTGTTTAAAAAGGAA+TGG | + | chr4.3:22635649-22635668 | MS.gene052570:intron | 35.0% | |
| GAAATTCCAAACCTTAGGTT+CGG | - | chr4.3:22635015-22635034 | None:intergenic | 35.0% | |
| GATGTCATACAAAATACCTC+CGG | + | chr4.3:22636441-22636460 | MS.gene052570:intron | 35.0% | |
| GCAGTCATGTGACTAAAAAA+GGG | - | chr4.3:22636573-22636592 | None:intergenic | 35.0% | |
| GCATAAAATGACCAATCATG+AGG | - | chr4.3:22637268-22637287 | None:intergenic | 35.0% | |
| GTGAATAAGTGAAATGTCAC+AGG | - | chr4.3:22635753-22635772 | None:intergenic | 35.0% | |
| GTTAGCAATGGAAGTTACTA+GGG | + | chr4.3:22636957-22636976 | MS.gene052570:intron | 35.0% | |
| TCATGTGACTAAAAAAGGGA+AGG | - | chr4.3:22636569-22636588 | None:intergenic | 35.0% | |
| TGTTAGCAATGGAAGTTACT+AGG | + | chr4.3:22636956-22636975 | MS.gene052570:intron | 35.0% | |
| ! | AATTTGAGTCCACTCTTTTC+TGG | - | chr4.3:22637957-22637976 | None:intergenic | 35.0% |
| ! | AGGTATTTTGTATGACATCC+TGG | - | chr4.3:22636440-22636459 | None:intergenic | 35.0% |
| ! | GAAGTGTTAGAATTGCGAAA+AGG | - | chr4.3:22635047-22635066 | None:intergenic | 35.0% |
| ! | TTACTATGTCACTGTTTTGC+AGG | + | chr4.3:22637601-22637620 | MS.gene052570:intron | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | - | chr4.3:22635599-22635618 | None:intergenic | 35.0% |
| !! | ACTGGTGTTTTTAATCCTGA+TGG | - | chr4.3:22637368-22637387 | None:intergenic | 35.0% |
| !! | ATATGCAGTTTTTGTTGTCG+CGG | + | chr4.3:22637537-22637556 | MS.gene052570:intron | 35.0% |
| !! | CGTACGAAAGATAACTTGTT+AGG | + | chr4.3:22636116-22636135 | MS.gene052570:intron | 35.0% |
| !! | GAAAGATAACTTGTTAGGAG+AGG | + | chr4.3:22636121-22636140 | MS.gene052570:intron | 35.0% |
| !! | TGGTTGACTTGTTTATGTTC+TGG | + | chr4.3:22635669-22635688 | MS.gene052570:intron | 35.0% |
| !!! | GTTTTTTCAGAAAGAGAGGA+GGG | + | chr4.3:22638655-22638674 | MS.gene052570:intron | 35.0% |
| !!! | TGTTTTTTCAGAAAGAGAGG+AGG | + | chr4.3:22638654-22638673 | MS.gene052570:intron | 35.0% |
| AACAGTAACACTCCTCTTGA+AGG | + | chr4.3:22635131-22635150 | MS.gene052570:CDS | 40.0% | |
| ACTCCCATATTCGAGGAATA+GGG | + | chr4.3:22636518-22636537 | MS.gene052570:intron | 40.0% | |
| AGCTCAGTTCGTTAGATCAT+TGG | + | chr4.3:22635721-22635740 | MS.gene052570:intron | 40.0% | |
| ATGCCTTACCTTGTTAGCAA+TGG | + | chr4.3:22636945-22636964 | MS.gene052570:intron | 40.0% | |
| ATTGTGTGCATATGTTGTGG+AGG | + | chr4.3:22636836-22636855 | MS.gene052570:intron | 40.0% | |
| CAATACGCTAGAGACTAGAA+AGG | + | chr4.3:22636879-22636898 | MS.gene052570:intron | 40.0% | |
| CCACAACATATGCACACAAT+AGG | - | chr4.3:22636836-22636855 | None:intergenic | 40.0% | |
| CCTATTGTGTGCATATGTTG+TGG | + | chr4.3:22636833-22636852 | MS.gene052570:intron | 40.0% | |
| CTAACGCCTAAGGACAAAAA+AGG | - | chr4.3:22635888-22635907 | None:intergenic | 40.0% | |
| CTTCCATTGCTAACAAGGTA+AGG | - | chr4.3:22636951-22636970 | None:intergenic | 40.0% | |
| GACTAAAAAAGGGAAGGACT+TGG | - | chr4.3:22636563-22636582 | None:intergenic | 40.0% | |
| GACTACATGCTTAAGACACT+CGG | - | chr4.3:22636073-22636092 | None:intergenic | 40.0% | |
| GATGCAGGGCCTAAAATTAT+CGG | + | chr4.3:22638503-22638522 | MS.gene052570:CDS | 40.0% | |
| GCTTCTAAACTTGTGCCTTA+AGG | + | chr4.3:22635581-22635600 | MS.gene052570:intron | 40.0% | |
| GGCCTAAAATTATCGGTGAA+GGG | + | chr4.3:22638510-22638529 | MS.gene052570:CDS | 40.0% | |
| GTGAACGTGATGATCTTTAG+AGG | - | chr4.3:22636715-22636734 | None:intergenic | 40.0% | |
| TGCTCTACAAACTTGAACAC+TGG | - | chr4.3:22637915-22637934 | None:intergenic | 40.0% | |
| TGCTTAAGACACTCGGTTAT+CGG | - | chr4.3:22636066-22636085 | None:intergenic | 40.0% | |
| TGTCATACAAAATACCTCCG+GGG | + | chr4.3:22636443-22636462 | MS.gene052570:intron | 40.0% | |
| TGTGAAGTTGAACCTTCAAG+AGG | - | chr4.3:22635146-22635165 | None:intergenic | 40.0% | |
| ! | AAGGGCAAAGTGTTTGAGTA+AGG | - | chr4.3:22636313-22636332 | None:intergenic | 40.0% |
| ! | AGCCCTTCACCGATAATTTT+AGG | - | chr4.3:22638515-22638534 | None:intergenic | 40.0% |
| ! | GGACGCATGAAACAACTTTT+TGG | - | chr4.3:22637746-22637765 | None:intergenic | 40.0% |
| !! | CAAGAGGAGTGTTACTGTTA+GGG | - | chr4.3:22635130-22635149 | None:intergenic | 40.0% |
| !! | TCAAGAGGAGTGTTACTGTT+AGG | - | chr4.3:22635131-22635150 | None:intergenic | 40.0% |
| !! | TGGGTCATGTTAACTTGTGT+CGG | + | chr4.3:22635450-22635469 | MS.gene052570:intron | 40.0% |
| !!! | GGCCATTAATTTTTTCTGCC+TGG | + | chr4.3:22638103-22638122 | MS.gene052570:intron | 40.0% |
| !!! | TAAGGGCCTTTTTTGTCCTT+AGG | + | chr4.3:22635879-22635898 | MS.gene052570:intron | 40.0% |
| AAGAAACCTGCAGAAGATGC+AGG | + | chr4.3:22638488-22638507 | MS.gene052570:CDS | 45.0% | |
| AAGATACCTTGCTAAGCAGC+AGG | + | chr4.3:22638679-22638698 | MS.gene052570:CDS | 45.0% | |
| AAGGGCTTGTCATTGACGAA+TGG | + | chr4.3:22638528-22638547 | MS.gene052570:CDS | 45.0% | |
| ACTTGGTCGCATCATGATGT+GGG | - | chr4.3:22636546-22636565 | None:intergenic | 45.0% | |
| AGAAACCTGCAGAAGATGCA+GGG | + | chr4.3:22638489-22638508 | MS.gene052570:CDS | 45.0% | |
| AGATACCTTGCTAAGCAGCA+GGG | + | chr4.3:22638680-22638699 | MS.gene052570:CDS | 45.0% | |
| AGCCACATAGCTTGATTGAG+CGG | + | chr4.3:22636488-22636507 | MS.gene052570:intron | 45.0% | |
| AGGGCTTGTCATTGACGAAT+GGG | + | chr4.3:22638529-22638548 | MS.gene052570:CDS | 45.0% | |
| AGGTACGGAGATCCACTTAA+GGG | - | chr4.3:22636152-22636171 | None:intergenic | 45.0% | |
| AGGTTTCTTCCGTGCTTCAA+GGG | - | chr4.3:22638477-22638496 | None:intergenic | 45.0% | |
| ATCCGCTCAATCAAGCTATG+TGG | - | chr4.3:22636493-22636512 | None:intergenic | 45.0% | |
| ATCCTTGACTCCCATATTCG+AGG | + | chr4.3:22636511-22636530 | MS.gene052570:intron | 45.0% | |
| ATGAGCCAGGAAAACAGGTT+AGG | + | chr4.3:22637338-22637357 | MS.gene052570:CDS | 45.0% | |
| CATATGTTGTGGAGGTTGAG+AGG | + | chr4.3:22636844-22636863 | MS.gene052570:intron | 45.0% | |
| CCAACATAGTGTGGCACAAT+TGG | + | chr4.3:22636040-22636059 | MS.gene052570:intron | 45.0% | |
| CCAATTGTGCCACACTATGT+TGG | - | chr4.3:22636043-22636062 | None:intergenic | 45.0% | |
| CGAGTACTTCTCCTCATGAT+TGG | + | chr4.3:22637254-22637273 | MS.gene052570:intron | 45.0% | |
| CTGCTCATCAAACTGTTTCC+AGG | - | chr4.3:22638124-22638143 | None:intergenic | 45.0% | |
| GACTCCCATATTCGAGGAAT+AGG | + | chr4.3:22636517-22636536 | MS.gene052570:intron | 45.0% | |
| GAGACTAATCCTTCGAGGTA+CGG | - | chr4.3:22636167-22636186 | None:intergenic | 45.0% | |
| GAGCCCTATTCCTCGAATAT+GGG | - | chr4.3:22636524-22636543 | None:intergenic | 45.0% | |
| GGAAAAATTGAAGCGGCAGT+TGG | + | chr4.3:22638436-22638455 | MS.gene052570:CDS | 45.0% | |
| GGGCCTAAAATTATCGGTGA+AGG | + | chr4.3:22638509-22638528 | MS.gene052570:CDS | 45.0% | |
| GTAGTCATGTGTTCGATCCA+TGG | + | chr4.3:22636087-22636106 | MS.gene052570:intron | 45.0% | |
| GTCATACAAAATACCTCCGG+GGG | + | chr4.3:22636444-22636463 | MS.gene052570:intron | 45.0% | |
| GTGGGCGAGACATTCAATAT+AGG | + | chr4.3:22638320-22638339 | MS.gene052570:intron | 45.0% | |
| GTTTGATGAGCAGAAAGACC+AGG | + | chr4.3:22638131-22638150 | MS.gene052570:intron | 45.0% | |
| TATATTAGCTGTGACCGAGG+AGG | - | chr4.3:22636675-22636694 | None:intergenic | 45.0% | |
| TCAATCAAGCTATGTGGCTG+TGG | - | chr4.3:22636487-22636506 | None:intergenic | 45.0% | |
| TCATACAAAATACCTCCGGG+GGG | + | chr4.3:22636445-22636464 | MS.gene052570:intron | 45.0% | |
| TGTAGATGAGCCAGGAAAAC+AGG | + | chr4.3:22637333-22637352 | MS.gene052570:intron | 45.0% | |
| TTAGGTTCGGAGTGAGGTTT+CGG | - | chr4.3:22635002-22635021 | None:intergenic | 45.0% | |
| TTCCTCGAATATGGGAGTCA+AGG | - | chr4.3:22636516-22636535 | None:intergenic | 45.0% | |
| ! | AGAGTATCATAGCAACCGGT+AGG | + | chr4.3:22637792-22637811 | MS.gene052570:intron | 45.0% |
| ! | AGTCACATGACTGCTGATTG+AGG | + | chr4.3:22636579-22636598 | MS.gene052570:intron | 45.0% |
| ! | GTCACATGACTGCTGATTGA+GGG | + | chr4.3:22636580-22636599 | MS.gene052570:intron | 45.0% |
| ! | TCACATGACTGCTGATTGAG+GGG | + | chr4.3:22636581-22636600 | MS.gene052570:intron | 45.0% |
| !! | ACCAAGTTTTAATGGCTGCG+CGG | + | chr4.3:22637065-22637084 | MS.gene052570:intron | 45.0% |
| !! | GGGTCATGTTAACTTGTGTC+GGG | + | chr4.3:22635451-22635470 | MS.gene052570:intron | 45.0% |
| !! | GTACCTCGAAGGATTAGTCT+CGG | + | chr4.3:22636166-22636185 | MS.gene052570:intron | 45.0% |
| !! | TACCTCGAAGGATTAGTCTC+GGG | + | chr4.3:22636167-22636186 | MS.gene052570:intron | 45.0% |
| !!! | AAGGATTAGTCTCGGGCTTT+TGG | + | chr4.3:22636174-22636193 | MS.gene052570:intron | 45.0% |
| AAATCTGCTCAACTGCCACC+TGG | - | chr4.3:22638152-22638171 | None:intergenic | 50.0% | |
| AACAGAAGACGACGTCGTGT+TGG | - | chr4.3:22635075-22635094 | None:intergenic | 50.0% | |
| AAGTCATTCCGCTTCCTCCT+CGG | + | chr4.3:22636658-22636677 | MS.gene052570:intron | 50.0% | |
| AATTGATTACGTCCCCGAGC+TGG | + | chr4.3:22638007-22638026 | MS.gene052570:CDS | 50.0% | |
| ACCCTTGCTAAGCACATCGT+TGG | + | chr4.3:22636753-22636772 | MS.gene052570:intron | 50.0% | |
| ATACAAAATACCTCCGGGGG+GGG | + | chr4.3:22636447-22636466 | MS.gene052570:intron | 50.0% | |
| CAAACCTTAGGTTCGGAGTG+AGG | - | chr4.3:22635008-22635027 | None:intergenic | 50.0% | |
| CAGGTTTCTTCCGTGCTTCA+AGG | - | chr4.3:22638478-22638497 | None:intergenic | 50.0% | |
| CATACAAAATACCTCCGGGG+GGG | + | chr4.3:22636446-22636465 | MS.gene052570:intron | 50.0% | |
| CCTGGCTCATCTACACAAGA+CGG | - | chr4.3:22637328-22637347 | None:intergenic | 50.0% | |
| CTCACTCCGAACCTAAGGTT+TGG | + | chr4.3:22635006-22635025 | MS.gene052570:CDS | 50.0% | |
| CTCATCTACACAAGACGGAG+AGG | - | chr4.3:22637323-22637342 | None:intergenic | 50.0% | |
| GAAACCTCACTCCGAACCTA+AGG | + | chr4.3:22635001-22635020 | MS.gene052570:CDS | 50.0% | |
| GAGGTACGGAGATCCACTTA+AGG | - | chr4.3:22636153-22636172 | None:intergenic | 50.0% | |
| GCCAACGATGTGCTTAGCAA+GGG | - | chr4.3:22636757-22636776 | None:intergenic | 50.0% | |
| GGAGCCCTATTCCTCGAATA+TGG | - | chr4.3:22636525-22636544 | None:intergenic | 50.0% | |
| GGTACACAGCACCAAAAGCA+CGG | - | chr4.3:22636342-22636361 | None:intergenic | 50.0% | |
| GGTACGGAGATCCACTTAAG+GGG | - | chr4.3:22636151-22636170 | None:intergenic | 50.0% | |
| GTGAGGTTTCGGTTCAGCTA+CGG | - | chr4.3:22634991-22635010 | None:intergenic | 50.0% | |
| GTTGCTATGATACTCTCGCC+AGG | - | chr4.3:22637788-22637807 | None:intergenic | 50.0% | |
| TCCGCGCAGCCATTAAAACT+TGG | - | chr4.3:22637069-22637088 | None:intergenic | 50.0% | |
| TGATGAGCAGAAAGACCAGG+TGG | + | chr4.3:22638134-22638153 | MS.gene052570:CDS | 50.0% | |
| TGCCAACGATGTGCTTAGCA+AGG | - | chr4.3:22636758-22636777 | None:intergenic | 50.0% | |
| TGCTAAGCACATCGTTGGCA+TGG | + | chr4.3:22636758-22636777 | MS.gene052570:intron | 50.0% | |
| TGGTTACCCATGGTATCCTC+CGG | - | chr4.3:22636200-22636219 | None:intergenic | 50.0% | |
| ! | ACCAAAAGCACGGGGTCATA+AGG | - | chr4.3:22636332-22636351 | None:intergenic | 50.0% |
| ! | AGTTGTTTCATGCGTCCTCC+TGG | + | chr4.3:22637749-22637768 | MS.gene052570:CDS | 50.0% |
| ! | CCAAAAGCACGGGGTCATAA+GGG | - | chr4.3:22636331-22636350 | None:intergenic | 50.0% |
| ! | GACTTGGTCGCATCATGATG+TGG | - | chr4.3:22636547-22636566 | None:intergenic | 50.0% |
| ! | GCACTCCTAACCTGTTTTCC+TGG | - | chr4.3:22637346-22637365 | None:intergenic | 50.0% |
| ! | GTACACAGCACCAAAAGCAC+GGG | - | chr4.3:22636341-22636360 | None:intergenic | 50.0% |
| ! | TACACAGCACCAAAAGCACG+GGG | - | chr4.3:22636340-22636359 | None:intergenic | 50.0% |
| ! | TTTTGGCCGGAGGATACCAT+GGG | + | chr4.3:22636191-22636210 | MS.gene052570:intron | 50.0% |
| !! | AACAGGTTAGGAGTGCCATC+AGG | + | chr4.3:22637350-22637369 | MS.gene052570:CDS | 50.0% |
| !! | ATTAGTCTCGGGCTTTTGGC+CGG | + | chr4.3:22636178-22636197 | MS.gene052570:intron | 50.0% |
| !! | GGCGAGAGTATCATAGCAAC+CGG | + | chr4.3:22637788-22637807 | MS.gene052570:CDS | 50.0% |
| AGAAGACGACGTCGTGTTGG+TGG | - | chr4.3:22635072-22635091 | None:intergenic | 55.0% | |
| AGCCCGAGACTAATCCTTCG+AGG | - | chr4.3:22636172-22636191 | None:intergenic | 55.0% | |
| AGCTACCCGAGAAGAGCAGA+CGG | + | chr4.3:22636395-22636414 | MS.gene052570:intron | 55.0% | |
| AGTGGATCTCCGTACCTCGA+AGG | + | chr4.3:22636155-22636174 | MS.gene052570:intron | 55.0% | |
| CCGTCTTGTGTAGATGAGCC+AGG | + | chr4.3:22637325-22637344 | MS.gene052570:intron | 55.0% | |
| CGAACTGAGCTAAGCTCACG+TGG | - | chr4.3:22635712-22635731 | None:intergenic | 55.0% | |
| CGAATCCGTCTGCTCTTCTC+GGG | - | chr4.3:22636403-22636422 | None:intergenic | 55.0% | |
| CTGATGCTGCCCTTGAAGCA+CGG | + | chr4.3:22638465-22638484 | MS.gene052570:CDS | 55.0% | |
| GCGAATCCGTCTGCTCTTCT+CGG | - | chr4.3:22636404-22636423 | None:intergenic | 55.0% | |
| GGAGAGGTCATCCCCTTAAG+TGG | + | chr4.3:22636137-22636156 | MS.gene052570:intron | 55.0% | |
| TACAAAATACCTCCGGGGGG+GGG | + | chr4.3:22636448-22636467 | MS.gene052570:intron | 55.0% | |
| TCTTTCGTACGCAGCAGCCA+TGG | - | chr4.3:22636107-22636126 | None:intergenic | 55.0% | |
| TGATACTCTCGCCAGGTGCA+AGG | - | chr4.3:22637781-22637800 | None:intergenic | 55.0% | |
| TTAGGCCCTGCATCTTCTGC+AGG | - | chr4.3:22638497-22638516 | None:intergenic | 55.0% | |
| ! | ACTGCTGATTGAGGGGAGGT+TGG | + | chr4.3:22636588-22636607 | MS.gene052570:intron | 55.0% |
| ! | CATGACTGCTGATTGAGGGG+AGG | + | chr4.3:22636584-22636603 | MS.gene052570:intron | 55.0% |
| ! | CCCTTATGACCCCGTGCTTT+TGG | + | chr4.3:22636328-22636347 | MS.gene052570:intron | 55.0% |
| ! | CTTTTGGCCGGAGGATACCA+TGG | + | chr4.3:22636190-22636209 | MS.gene052570:intron | 55.0% |
| ACAAAATACCTCCGGGGGGG+GGG | + | chr4.3:22636449-22636468 | MS.gene052570:intron | 60.0% | |
| AGCTGTGACCGAGGAGGAAG+CGG | - | chr4.3:22636669-22636688 | None:intergenic | 60.0% | |
| AGCTTGAGACGACGTCGTGC+TGG | - | chr4.3:22635209-22635228 | None:intergenic | 60.0% | |
| AGGGGAGGTTGGCGAGAAGA+AGG | + | chr4.3:22636599-22636618 | MS.gene052570:intron | 60.0% | |
| AGGTTGGCGAGAAGAAGGGG+GGG | + | chr4.3:22636604-22636623 | MS.gene052570:intron | 60.0% | |
| CCAGGTGCAAGGATAGCTCC+AGG | - | chr4.3:22637770-22637789 | None:intergenic | 60.0% | |
| CCTGGAGCTATCCTTGCACC+TGG | + | chr4.3:22637767-22637786 | MS.gene052570:CDS | 60.0% | |
| CTCACAGGACTTGGACGCTC+TGG | - | chr4.3:22638195-22638214 | None:intergenic | 60.0% | |
| GAGCTGGCAACGCACGTTGA+GGG | + | chr4.3:22636626-22636645 | MS.gene052570:intron | 60.0% | |
| GAGGTTGGCGAGAAGAAGGG+GGG | + | chr4.3:22636603-22636622 | MS.gene052570:intron | 60.0% | |
| GCTTGAGACGACGTCGTGCT+GGG | - | chr4.3:22635208-22635227 | None:intergenic | 60.0% | |
| GGAGGTTGGCGAGAAGAAGG+GGG | + | chr4.3:22636602-22636621 | MS.gene052570:intron | 60.0% | |
| GGGAGGTTGGCGAGAAGAAG+GGG | + | chr4.3:22636601-22636620 | MS.gene052570:intron | 60.0% | |
| GGGGAGGTTGGCGAGAAGAA+GGG | + | chr4.3:22636600-22636619 | MS.gene052570:intron | 60.0% | |
| GGTGCAAGGATAGCTCCAGG+AGG | - | chr4.3:22637767-22637786 | None:intergenic | 60.0% | |
| TGCTAAGCAGCAGGGCGATG+TGG | + | chr4.3:22638688-22638707 | MS.gene052570:CDS | 60.0% | |
| TGGCAACGCACGTTGAGGGA+CGG | + | chr4.3:22636630-22636649 | MS.gene052570:intron | 60.0% | |
| ! | AGCAGACGGATTCGCCACGT+AGG | + | chr4.3:22636409-22636428 | MS.gene052570:intron | 60.0% |
| ! | CATCGCCCTGCTGCTTAGCA+AGG | - | chr4.3:22638688-22638707 | None:intergenic | 60.0% |
| AAAATACCTCCGGGGGGGGG+GGG | + | chr4.3:22636451-22636470 | MS.gene052570:intron | 65.0% | |
| ACATCCTGGCCTCGCCTACG+TGG | - | chr4.3:22636426-22636445 | None:intergenic | 65.0% | |
| ACGGATTCGCCACGTAGGCG+AGG | + | chr4.3:22636414-22636433 | MS.gene052570:intron | 65.0% | |
| CAAAATACCTCCGGGGGGGG+GGG | + | chr4.3:22636450-22636469 | MS.gene052570:intron | 65.0% | |
| GGAGCTGGCAACGCACGTTG+AGG | + | chr4.3:22636625-22636644 | MS.gene052570:intron | 65.0% | |
| ! | AGTCTCGGGCTTTTGGCCGG+AGG | + | chr4.3:22636181-22636200 | MS.gene052570:intron | 65.0% |
| AAATACCTCCGGGGGGGGGG+GGG | + | chr4.3:22636452-22636471 | MS.gene052570:intron | 70.0% | |
| GCGAGAAGAAGGGGGGGAGC+TGG | + | chr4.3:22636610-22636629 | MS.gene052570:intron | 70.0% | |
| TTCGCCACGTAGGCGAGGCC+AGG | + | chr4.3:22636419-22636438 | MS.gene052570:intron | 70.0% | |
| AATACCTCCGGGGGGGGGGG+GGG | + | chr4.3:22636453-22636472 | MS.gene052570:intron | 75.0% | |
| ! | ATACCTCCGGGGGGGGGGGG+GGG | + | chr4.3:22636454-22636473 | MS.gene052570:intron | 80.0% |
| ! | TACCTCCGGGGGGGGGGGGG+GGG | + | chr4.3:22636455-22636474 | MS.gene052570:intron | 85.0% |
| ! | ACCTCCGGGGGGGGGGGGGG+GGG | + | chr4.3:22636456-22636475 | MS.gene052570:intron | 90.0% |
| ! | CCTCCGGGGGGGGGGGGGGG+GGG | + | chr4.3:22636457-22636476 | MS.gene052570:intron | 95.0% |
| ! | CTCCGGGGGGGGGGGGGGGG+GGG | + | chr4.3:22636458-22636477 | MS.gene052570:intron | 95.0% |
| ! | TCCGGGGGGGGGGGGGGGGG+GGG | + | chr4.3:22636459-22636478 | MS.gene052570:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 22634984 | 22638727 | 22634984 | ID=MS.gene052570 |
| chr4.3 | mRNA | 22634984 | 22638727 | 22634984 | ID=MS.gene052570.t1;Parent=MS.gene052570 |
| chr4.3 | exon | 22634984 | 22635257 | 22634984 | ID=MS.gene052570.t1.exon1;Parent=MS.gene052570.t1 |
| chr4.3 | CDS | 22634984 | 22635257 | 22634984 | ID=cds.MS.gene052570.t1;Parent=MS.gene052570.t1 |
| chr4.3 | exon | 22637338 | 22637408 | 22637338 | ID=MS.gene052570.t1.exon2;Parent=MS.gene052570.t1 |
| chr4.3 | CDS | 22637338 | 22637408 | 22637338 | ID=cds.MS.gene052570.t1;Parent=MS.gene052570.t1 |
| chr4.3 | exon | 22637728 | 22637809 | 22637728 | ID=MS.gene052570.t1.exon3;Parent=MS.gene052570.t1 |
| chr4.3 | CDS | 22637728 | 22637809 | 22637728 | ID=cds.MS.gene052570.t1;Parent=MS.gene052570.t1 |
| chr4.3 | exon | 22637916 | 22638028 | 22637916 | ID=MS.gene052570.t1.exon4;Parent=MS.gene052570.t1 |
| chr4.3 | CDS | 22637916 | 22638028 | 22637916 | ID=cds.MS.gene052570.t1;Parent=MS.gene052570.t1 |
| chr4.3 | exon | 22638132 | 22638209 | 22638132 | ID=MS.gene052570.t1.exon5;Parent=MS.gene052570.t1 |
| chr4.3 | CDS | 22638132 | 22638209 | 22638132 | ID=cds.MS.gene052570.t1;Parent=MS.gene052570.t1 |
| chr4.3 | exon | 22638431 | 22638550 | 22638431 | ID=MS.gene052570.t1.exon6;Parent=MS.gene052570.t1 |
| chr4.3 | CDS | 22638431 | 22638550 | 22638431 | ID=cds.MS.gene052570.t1;Parent=MS.gene052570.t1 |
| chr4.3 | exon | 22638665 | 22638727 | 22638665 | ID=MS.gene052570.t1.exon7;Parent=MS.gene052570.t1 |
| chr4.3 | CDS | 22638665 | 22638727 | 22638665 | ID=cds.MS.gene052570.t1;Parent=MS.gene052570.t1 |
| Gene Sequence |
| Protein sequence |
