Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32506.t1 | XP_003616489.2 | 92.9 | 435 | 28 | 3 | 1 | 434 | 1 | 433 | 4.30E-230 | 807 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32506.t1 | Q6XBF8 | 51.4 | 432 | 203 | 6 | 6 | 434 | 9 | 436 | 2.7e-119 | 430.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32506.t1 | G7K1Z4 | 92.9 | 435 | 28 | 3 | 1 | 434 | 1 | 433 | 3.1e-230 | 807.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene32506 | MS.gene013256 | PPI |
MS.gene06341 | MS.gene32506 | PPI |
MS.gene40949 | MS.gene32506 | PPI |
MS.gene049227 | MS.gene32506 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32506.t1 | MTR_5g080890 | 92.661 | 436 | 29 | 3 | 1 | 435 | 1 | 434 | 0.0 | 822 |
MS.gene32506.t1 | MTR_5g080960 | 92.661 | 436 | 29 | 3 | 1 | 435 | 1 | 434 | 0.0 | 822 |
MS.gene32506.t1 | MTR_8g096990 | 75.632 | 435 | 103 | 2 | 1 | 435 | 1 | 432 | 0.0 | 678 |
MS.gene32506.t1 | MTR_8g038280 | 71.689 | 438 | 119 | 2 | 1 | 435 | 1 | 436 | 0.0 | 639 |
MS.gene32506.t1 | MTR_5g044770 | 71.724 | 435 | 119 | 3 | 1 | 435 | 1 | 431 | 0.0 | 632 |
MS.gene32506.t1 | MTR_8g038250 | 70.843 | 439 | 101 | 3 | 1 | 435 | 1 | 416 | 0.0 | 619 |
MS.gene32506.t1 | MTR_6g090290 | 68.721 | 438 | 131 | 3 | 1 | 434 | 1 | 436 | 0.0 | 603 |
MS.gene32506.t1 | MTR_4g109760 | 68.966 | 435 | 99 | 4 | 1 | 435 | 1 | 399 | 0.0 | 557 |
MS.gene32506.t1 | MTR_8g038310 | 61.609 | 435 | 144 | 4 | 1 | 434 | 1 | 413 | 0.0 | 543 |
MS.gene32506.t1 | MTR_3g028120 | 54.676 | 417 | 180 | 6 | 25 | 434 | 24 | 438 | 4.83e-153 | 441 |
MS.gene32506.t1 | MTR_5g038360 | 51.370 | 438 | 200 | 8 | 5 | 435 | 6 | 437 | 1.50e-147 | 427 |
MS.gene32506.t1 | MTR_2g067830 | 54.146 | 410 | 177 | 8 | 32 | 434 | 1 | 406 | 1.71e-142 | 413 |
MS.gene32506.t1 | MTR_6g088760 | 53.941 | 406 | 177 | 7 | 1 | 398 | 1 | 404 | 5.64e-142 | 416 |
MS.gene32506.t1 | MTR_0024s0040 | 53.012 | 415 | 180 | 9 | 30 | 434 | 1 | 410 | 2.91e-134 | 392 |
MS.gene32506.t1 | MTR_5g044570 | 48.190 | 442 | 190 | 11 | 1 | 434 | 1 | 411 | 1.72e-130 | 382 |
MS.gene32506.t1 | MTR_2g105300 | 51.106 | 407 | 166 | 9 | 32 | 431 | 1 | 381 | 2.86e-130 | 381 |
MS.gene32506.t1 | MTR_0036s0070 | 42.529 | 435 | 225 | 12 | 11 | 435 | 8 | 427 | 4.12e-109 | 328 |
MS.gene32506.t1 | MTR_0036s0050 | 42.597 | 439 | 226 | 12 | 11 | 434 | 8 | 435 | 1.58e-106 | 322 |
MS.gene32506.t1 | MTR_0036s0110 | 41.280 | 453 | 236 | 10 | 1 | 434 | 1 | 442 | 9.82e-106 | 320 |
MS.gene32506.t1 | MTR_5g008070 | 43.062 | 418 | 218 | 9 | 21 | 433 | 23 | 425 | 1.61e-102 | 311 |
MS.gene32506.t1 | MTR_2g059490 | 48.023 | 354 | 176 | 7 | 87 | 434 | 59 | 410 | 7.98e-102 | 310 |
MS.gene32506.t1 | MTR_2g059460 | 42.381 | 420 | 196 | 12 | 23 | 434 | 25 | 406 | 9.32e-96 | 293 |
MS.gene32506.t1 | MTR_5g008110 | 44.225 | 355 | 188 | 7 | 85 | 434 | 66 | 415 | 8.05e-94 | 289 |
MS.gene32506.t1 | MTR_5g008150 | 40.052 | 382 | 218 | 7 | 59 | 434 | 36 | 412 | 4.58e-92 | 284 |
MS.gene32506.t1 | MTR_3g097150 | 37.647 | 425 | 241 | 12 | 22 | 434 | 36 | 448 | 3.87e-83 | 263 |
MS.gene32506.t1 | MTR_1g060750 | 35.980 | 403 | 222 | 9 | 40 | 434 | 2 | 376 | 4.28e-72 | 231 |
MS.gene32506.t1 | MTR_5g008090 | 40.803 | 299 | 166 | 7 | 142 | 434 | 21 | 314 | 4.04e-66 | 214 |
MS.gene32506.t1 | MTR_4g045857 | 42.484 | 306 | 139 | 8 | 14 | 312 | 13 | 288 | 5.10e-66 | 213 |
MS.gene32506.t1 | MTR_7g117430 | 37.950 | 361 | 195 | 11 | 85 | 432 | 140 | 484 | 7.85e-59 | 200 |
MS.gene32506.t1 | MTR_1g115210 | 33.488 | 430 | 252 | 15 | 21 | 432 | 73 | 486 | 2.85e-57 | 196 |
MS.gene32506.t1 | MTR_1g039270 | 34.174 | 436 | 232 | 17 | 28 | 432 | 58 | 469 | 2.10e-56 | 193 |
MS.gene32506.t1 | MTR_6g088765 | 42.629 | 251 | 105 | 5 | 160 | 407 | 3 | 217 | 5.03e-53 | 177 |
MS.gene32506.t1 | MTR_2g028190 | 34.571 | 431 | 246 | 16 | 28 | 432 | 31 | 451 | 5.70e-53 | 184 |
MS.gene32506.t1 | MTR_1g111350 | 33.652 | 419 | 238 | 14 | 21 | 432 | 82 | 467 | 7.88e-52 | 181 |
MS.gene32506.t1 | MTR_6g085010 | 34.857 | 350 | 209 | 11 | 87 | 432 | 157 | 491 | 4.19e-49 | 174 |
MS.gene32506.t1 | MTR_8g103880 | 32.486 | 354 | 216 | 12 | 87 | 432 | 117 | 455 | 2.26e-45 | 163 |
MS.gene32506.t1 | MTR_3g046300 | 28.603 | 458 | 282 | 12 | 11 | 435 | 16 | 461 | 3.29e-44 | 160 |
MS.gene32506.t1 | MTR_3g053710 | 33.425 | 362 | 216 | 11 | 85 | 432 | 116 | 466 | 1.93e-41 | 153 |
MS.gene32506.t1 | MTR_4g007740 | 32.231 | 363 | 213 | 13 | 87 | 433 | 133 | 478 | 3.80e-41 | 152 |
MS.gene32506.t1 | MTR_5g091130 | 32.546 | 381 | 229 | 11 | 74 | 432 | 179 | 553 | 5.48e-41 | 153 |
MS.gene32506.t1 | MTR_2g055840 | 28.947 | 380 | 234 | 13 | 78 | 432 | 5 | 373 | 7.27e-39 | 144 |
MS.gene32506.t1 | MTR_3g068000 | 27.907 | 387 | 221 | 14 | 89 | 435 | 76 | 444 | 6.48e-33 | 129 |
MS.gene32506.t1 | MTR_7g080230 | 26.906 | 446 | 263 | 17 | 30 | 435 | 11 | 433 | 7.83e-32 | 127 |
MS.gene32506.t1 | MTR_2g070430 | 27.460 | 437 | 271 | 17 | 28 | 429 | 25 | 450 | 1.13e-31 | 126 |
MS.gene32506.t1 | MTR_7g062360 | 29.243 | 383 | 213 | 17 | 89 | 432 | 62 | 425 | 1.68e-31 | 125 |
MS.gene32506.t1 | MTR_1g078240 | 27.720 | 386 | 232 | 17 | 81 | 435 | 63 | 432 | 8.57e-30 | 121 |
MS.gene32506.t1 | MTR_3g053980 | 31.285 | 358 | 223 | 10 | 85 | 432 | 141 | 485 | 1.99e-29 | 120 |
MS.gene32506.t1 | MTR_7g021510 | 27.179 | 390 | 240 | 17 | 73 | 435 | 64 | 436 | 3.05e-29 | 119 |
MS.gene32506.t1 | MTR_1g078240 | 28.351 | 388 | 228 | 18 | 81 | 435 | 63 | 433 | 4.12e-29 | 119 |
MS.gene32506.t1 | MTR_2g063110 | 27.665 | 394 | 237 | 11 | 85 | 432 | 117 | 508 | 5.33e-29 | 119 |
MS.gene32506.t1 | MTR_4g008110 | 52.991 | 117 | 31 | 1 | 158 | 274 | 45 | 137 | 6.74e-28 | 107 |
MS.gene32506.t1 | MTR_8g094590 | 27.660 | 376 | 223 | 16 | 85 | 433 | 72 | 425 | 1.17e-27 | 114 |
MS.gene32506.t1 | MTR_6g084710 | 27.619 | 420 | 248 | 20 | 49 | 432 | 151 | 550 | 1.56e-27 | 115 |
MS.gene32506.t1 | MTR_8g094590 | 32.567 | 261 | 144 | 10 | 85 | 335 | 72 | 310 | 2.93e-26 | 108 |
MS.gene32506.t1 | MTR_2g084550 | 30.423 | 378 | 219 | 16 | 85 | 433 | 76 | 438 | 3.74e-26 | 110 |
MS.gene32506.t1 | MTR_7g105850 | 26.708 | 483 | 277 | 21 | 9 | 435 | 7 | 468 | 8.23e-26 | 109 |
MS.gene32506.t1 | MTR_3g087780 | 26.386 | 451 | 259 | 18 | 28 | 432 | 27 | 450 | 8.49e-26 | 110 |
MS.gene32506.t1 | MTR_3g065160 | 26.486 | 370 | 232 | 14 | 88 | 434 | 76 | 428 | 1.03e-25 | 108 |
MS.gene32506.t1 | MTR_8g094590 | 30.496 | 282 | 162 | 11 | 85 | 354 | 72 | 331 | 1.11e-25 | 108 |
MS.gene32506.t1 | MTR_6g084710 | 28.916 | 332 | 201 | 15 | 49 | 365 | 151 | 462 | 1.38e-25 | 109 |
MS.gene32506.t1 | MTR_1g078240 | 29.560 | 318 | 183 | 15 | 81 | 373 | 63 | 364 | 2.63e-25 | 107 |
MS.gene32506.t1 | MTR_4g095270 | 25.341 | 367 | 237 | 12 | 85 | 434 | 79 | 425 | 4.80e-25 | 108 |
MS.gene32506.t1 | MTR_4g095270 | 25.341 | 367 | 237 | 12 | 85 | 434 | 79 | 425 | 6.50e-25 | 107 |
MS.gene32506.t1 | MTR_5g016260 | 24.932 | 369 | 236 | 12 | 85 | 434 | 87 | 433 | 6.94e-25 | 107 |
MS.gene32506.t1 | MTR_4g023650 | 27.595 | 395 | 227 | 19 | 75 | 434 | 51 | 421 | 8.62e-25 | 106 |
MS.gene32506.t1 | MTR_1g037630 | 27.934 | 426 | 266 | 16 | 26 | 433 | 27 | 429 | 9.14e-25 | 106 |
MS.gene32506.t1 | MTR_1g061940 | 28.912 | 377 | 231 | 16 | 85 | 435 | 82 | 447 | 9.24e-25 | 106 |
MS.gene32506.t1 | MTR_5g016260 | 24.932 | 369 | 236 | 12 | 85 | 434 | 87 | 433 | 1.07e-24 | 107 |
MS.gene32506.t1 | MTR_4g056420 | 29.058 | 382 | 218 | 18 | 85 | 433 | 76 | 437 | 1.31e-24 | 106 |
MS.gene32506.t1 | MTR_0945s0010 | 42.742 | 124 | 69 | 2 | 311 | 433 | 1 | 123 | 1.34e-24 | 99.8 |
MS.gene32506.t1 | MTR_3g096930 | 25.330 | 379 | 231 | 15 | 85 | 435 | 83 | 437 | 2.29e-24 | 105 |
MS.gene32506.t1 | MTR_1g029810 | 26.190 | 378 | 229 | 18 | 85 | 434 | 56 | 411 | 2.30e-24 | 104 |
MS.gene32506.t1 | MTR_1g029810 | 26.190 | 378 | 229 | 18 | 85 | 434 | 56 | 411 | 2.86e-24 | 104 |
MS.gene32506.t1 | MTR_8g075090 | 29.032 | 372 | 207 | 19 | 92 | 434 | 118 | 461 | 4.17e-24 | 105 |
MS.gene32506.t1 | MTR_5g022880 | 26.415 | 424 | 253 | 16 | 45 | 432 | 61 | 461 | 4.82e-24 | 104 |
MS.gene32506.t1 | MTR_4g023630 | 26.786 | 392 | 234 | 17 | 75 | 434 | 51 | 421 | 1.06e-23 | 102 |
MS.gene32506.t1 | MTR_8g075090 | 28.919 | 370 | 206 | 19 | 92 | 432 | 118 | 459 | 1.72e-23 | 102 |
MS.gene32506.t1 | MTR_5g061690 | 27.191 | 445 | 252 | 22 | 28 | 427 | 25 | 442 | 4.92e-23 | 101 |
MS.gene32506.t1 | MTR_7g080230 | 26.554 | 354 | 214 | 13 | 110 | 435 | 28 | 363 | 2.63e-22 | 98.6 |
MS.gene32506.t1 | MTR_7g102750 | 27.441 | 379 | 232 | 18 | 85 | 435 | 80 | 443 | 3.35e-22 | 99.4 |
MS.gene32506.t1 | MTR_3g014290 | 28.836 | 378 | 235 | 14 | 72 | 433 | 58 | 417 | 5.22e-22 | 97.8 |
MS.gene32506.t1 | MTR_2g103340 | 43.200 | 125 | 26 | 2 | 21 | 145 | 34 | 113 | 7.01e-22 | 93.2 |
MS.gene32506.t1 | MTR_2g103340 | 50.633 | 79 | 30 | 3 | 352 | 429 | 89 | 159 | 6.40e-11 | 61.6 |
MS.gene32506.t1 | MTR_8g075090 | 29.819 | 332 | 186 | 17 | 92 | 398 | 118 | 427 | 4.53e-21 | 95.5 |
MS.gene32506.t1 | MTR_5g080330 | 28.610 | 367 | 185 | 16 | 103 | 435 | 2 | 325 | 4.78e-21 | 95.1 |
MS.gene32506.t1 | MTR_5g077850 | 25.526 | 380 | 227 | 15 | 88 | 434 | 83 | 439 | 1.97e-20 | 93.6 |
MS.gene32506.t1 | MTR_4g100990 | 27.206 | 408 | 223 | 17 | 87 | 432 | 75 | 470 | 4.55e-20 | 92.8 |
MS.gene32506.t1 | MTR_7g102750 | 28.846 | 312 | 185 | 15 | 85 | 373 | 80 | 377 | 1.16e-18 | 88.2 |
MS.gene32506.t1 | MTR_3g087780 | 28.660 | 321 | 191 | 13 | 129 | 432 | 45 | 344 | 1.20e-18 | 88.2 |
MS.gene32506.t1 | MTR_3g087780 | 28.349 | 321 | 192 | 12 | 129 | 432 | 9 | 308 | 1.28e-18 | 87.4 |
MS.gene32506.t1 | MTR_5g061690 | 29.739 | 306 | 174 | 17 | 138 | 427 | 23 | 303 | 3.51e-18 | 86.3 |
MS.gene32506.t1 | MTR_8g039540 | 26.222 | 450 | 285 | 18 | 9 | 433 | 7 | 434 | 1.83e-17 | 84.3 |
MS.gene32506.t1 | MTR_8g075010 | 25.876 | 371 | 222 | 16 | 90 | 432 | 104 | 449 | 2.24e-16 | 81.6 |
MS.gene32506.t1 | MTR_5g077920 | 25.253 | 396 | 250 | 14 | 72 | 435 | 48 | 429 | 1.55e-15 | 78.6 |
MS.gene32506.t1 | MTR_3g100500 | 29.041 | 365 | 219 | 16 | 85 | 432 | 96 | 437 | 2.87e-15 | 77.8 |
MS.gene32506.t1 | MTR_2g037710 | 27.315 | 216 | 128 | 9 | 224 | 432 | 12 | 205 | 4.61e-12 | 65.5 |
MS.gene32506.t1 | MTR_1g072380 | 22.807 | 399 | 232 | 15 | 87 | 430 | 57 | 434 | 6.39e-12 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32506.t1 | AT1G64830 | 52.068 | 411 | 191 | 5 | 26 | 434 | 24 | 430 | 1.68e-143 | 416 |
MS.gene32506.t1 | AT5G33340 | 52.798 | 411 | 187 | 6 | 27 | 434 | 30 | 436 | 8.52e-139 | 405 |
MS.gene32506.t1 | AT2G35615 | 46.032 | 441 | 214 | 8 | 14 | 433 | 7 | 444 | 3.92e-117 | 350 |
MS.gene32506.t1 | AT1G31450 | 45.372 | 443 | 218 | 9 | 5 | 433 | 10 | 442 | 2.25e-111 | 335 |
MS.gene32506.t1 | AT2G28010 | 39.906 | 426 | 203 | 11 | 13 | 433 | 15 | 392 | 3.84e-87 | 271 |
MS.gene32506.t1 | AT2G28040 | 40.284 | 422 | 200 | 14 | 16 | 433 | 18 | 391 | 5.99e-84 | 263 |
MS.gene32506.t1 | AT2G28040 | 41.775 | 383 | 197 | 11 | 54 | 433 | 23 | 382 | 8.29e-84 | 262 |
MS.gene32506.t1 | AT2G28030 | 42.149 | 363 | 185 | 7 | 74 | 433 | 48 | 388 | 1.12e-81 | 257 |
MS.gene32506.t1 | AT2G28220 | 37.813 | 439 | 219 | 12 | 3 | 433 | 6 | 398 | 1.15e-81 | 257 |
MS.gene32506.t1 | AT2G28225 | 40.489 | 368 | 188 | 9 | 74 | 433 | 54 | 398 | 8.54e-78 | 247 |
MS.gene32506.t1 | AT2G03200 | 36.574 | 432 | 237 | 13 | 26 | 434 | 43 | 460 | 5.54e-74 | 239 |
MS.gene32506.t1 | AT1G01300 | 38.997 | 359 | 194 | 13 | 85 | 432 | 140 | 484 | 1.42e-58 | 199 |
MS.gene32506.t1 | AT3G61820 | 38.228 | 395 | 208 | 16 | 55 | 432 | 108 | 483 | 1.19e-57 | 197 |
MS.gene32506.t1 | AT4G30030 | 36.339 | 366 | 205 | 14 | 79 | 432 | 70 | 419 | 2.54e-55 | 189 |
MS.gene32506.t1 | AT3G18490 | 35.955 | 356 | 205 | 13 | 85 | 432 | 160 | 500 | 3.15e-54 | 188 |
MS.gene32506.t1 | AT3G20015 | 31.390 | 446 | 247 | 17 | 20 | 432 | 51 | 470 | 6.18e-51 | 179 |
MS.gene32506.t1 | AT2G23945 | 28.540 | 459 | 277 | 16 | 9 | 434 | 10 | 450 | 1.07e-50 | 178 |
MS.gene32506.t1 | AT1G25510 | 35.211 | 355 | 206 | 13 | 85 | 432 | 146 | 483 | 3.98e-49 | 174 |
MS.gene32506.t1 | AT3G25700 | 31.455 | 426 | 245 | 18 | 39 | 432 | 39 | 449 | 3.98e-46 | 166 |
MS.gene32506.t1 | AT5G10760 | 33.741 | 409 | 233 | 15 | 31 | 432 | 87 | 464 | 7.61e-44 | 159 |
MS.gene32506.t1 | AT5G10770 | 34.540 | 359 | 211 | 12 | 85 | 433 | 130 | 474 | 1.06e-43 | 159 |
MS.gene32506.t1 | AT4G30040 | 31.435 | 439 | 250 | 20 | 14 | 427 | 15 | 427 | 2.26e-43 | 157 |
MS.gene32506.t1 | AT1G79720 | 36.074 | 377 | 181 | 19 | 87 | 432 | 135 | 482 | 1.02e-42 | 157 |
MS.gene32506.t1 | AT3G12700 | 30.726 | 358 | 235 | 8 | 87 | 433 | 106 | 461 | 2.33e-41 | 153 |
MS.gene32506.t1 | AT5G36260 | 31.117 | 376 | 219 | 16 | 85 | 435 | 76 | 436 | 5.74e-41 | 152 |
MS.gene32506.t1 | AT2G42980 | 32.990 | 388 | 221 | 15 | 74 | 432 | 147 | 524 | 1.65e-40 | 152 |
MS.gene32506.t1 | AT3G59080 | 31.865 | 386 | 226 | 14 | 74 | 432 | 157 | 532 | 1.27e-39 | 149 |
MS.gene32506.t1 | AT2G39710 | 31.300 | 377 | 203 | 16 | 89 | 427 | 67 | 425 | 2.74e-36 | 139 |
MS.gene32506.t1 | AT3G02740 | 29.365 | 378 | 231 | 14 | 76 | 433 | 79 | 440 | 3.01e-36 | 139 |
MS.gene32506.t1 | AT3G02740 | 29.155 | 367 | 229 | 13 | 87 | 433 | 10 | 365 | 4.60e-36 | 137 |
MS.gene32506.t1 | AT1G65240 | 29.032 | 372 | 225 | 15 | 85 | 433 | 72 | 427 | 1.56e-33 | 131 |
MS.gene32506.t1 | AT3G59080 | 29.396 | 381 | 206 | 13 | 74 | 432 | 157 | 496 | 2.64e-29 | 120 |
MS.gene32506.t1 | AT1G09750 | 30.130 | 385 | 225 | 16 | 73 | 432 | 83 | 448 | 4.92e-29 | 118 |
MS.gene32506.t1 | AT1G05840 | 28.382 | 377 | 231 | 13 | 85 | 435 | 78 | 441 | 7.85e-29 | 118 |
MS.gene32506.t1 | AT5G02190 | 26.596 | 376 | 222 | 15 | 96 | 432 | 82 | 442 | 1.97e-28 | 117 |
MS.gene32506.t1 | AT3G54400 | 29.156 | 391 | 237 | 15 | 62 | 433 | 56 | 425 | 5.12e-28 | 115 |
MS.gene32506.t1 | AT5G45120 | 28.193 | 415 | 216 | 20 | 84 | 432 | 80 | 478 | 6.48e-28 | 115 |
MS.gene32506.t1 | AT3G50050 | 26.164 | 451 | 280 | 18 | 12 | 434 | 13 | 438 | 8.42e-28 | 116 |
MS.gene32506.t1 | AT4G33490 | 26.161 | 409 | 236 | 17 | 63 | 432 | 30 | 411 | 3.15e-27 | 113 |
MS.gene32506.t1 | AT1G66180 | 26.005 | 373 | 235 | 14 | 88 | 435 | 73 | 429 | 5.31e-27 | 112 |
MS.gene32506.t1 | AT1G44130 | 25.750 | 400 | 244 | 15 | 67 | 434 | 23 | 401 | 1.63e-26 | 110 |
MS.gene32506.t1 | AT5G43100 | 26.431 | 367 | 230 | 13 | 85 | 433 | 74 | 418 | 6.84e-26 | 110 |
MS.gene32506.t1 | AT1G49050 | 26.735 | 389 | 236 | 18 | 80 | 434 | 197 | 570 | 7.67e-26 | 110 |
MS.gene32506.t1 | AT1G49050 | 26.243 | 362 | 221 | 15 | 105 | 434 | 50 | 397 | 8.25e-26 | 108 |
MS.gene32506.t1 | AT1G08210 | 28.226 | 372 | 232 | 13 | 85 | 433 | 82 | 441 | 1.08e-25 | 109 |
MS.gene32506.t1 | AT2G36670 | 27.273 | 374 | 238 | 14 | 85 | 435 | 98 | 460 | 1.14e-25 | 109 |
MS.gene32506.t1 | AT1G08210 | 28.226 | 372 | 232 | 13 | 85 | 433 | 116 | 475 | 1.40e-25 | 109 |
MS.gene32506.t1 | AT1G08210 | 28.108 | 370 | 235 | 13 | 85 | 433 | 130 | 489 | 1.42e-25 | 109 |
MS.gene32506.t1 | AT5G43100 | 26.431 | 367 | 230 | 13 | 85 | 433 | 74 | 418 | 1.50e-25 | 109 |
MS.gene32506.t1 | AT2G36670 | 27.151 | 372 | 237 | 14 | 87 | 435 | 105 | 465 | 1.95e-25 | 108 |
MS.gene32506.t1 | AT2G36670 | 27.005 | 374 | 235 | 15 | 87 | 435 | 34 | 394 | 2.18e-25 | 108 |
MS.gene32506.t1 | AT2G36670 | 27.005 | 374 | 235 | 15 | 87 | 435 | 34 | 394 | 2.18e-25 | 108 |
MS.gene32506.t1 | AT5G37540 | 26.415 | 371 | 234 | 13 | 88 | 432 | 81 | 438 | 2.20e-25 | 108 |
MS.gene32506.t1 | AT5G22850 | 29.521 | 376 | 229 | 16 | 85 | 435 | 79 | 443 | 4.36e-25 | 107 |
MS.gene32506.t1 | AT4G33490 | 29.934 | 304 | 170 | 13 | 63 | 349 | 27 | 304 | 1.22e-23 | 102 |
MS.gene32506.t1 | AT2G17760 | 27.972 | 429 | 248 | 22 | 32 | 432 | 54 | 449 | 1.35e-23 | 103 |
MS.gene32506.t1 | AT4G12920 | 26.893 | 383 | 243 | 15 | 61 | 432 | 31 | 387 | 1.87e-23 | 101 |
MS.gene32506.t1 | AT1G77480 | 26.440 | 382 | 224 | 18 | 85 | 434 | 65 | 421 | 1.98e-23 | 102 |
MS.gene32506.t1 | AT1G77480 | 26.440 | 382 | 224 | 18 | 85 | 434 | 65 | 421 | 3.23e-23 | 102 |
MS.gene32506.t1 | AT1G49050 | 28.261 | 276 | 172 | 12 | 80 | 343 | 197 | 458 | 5.28e-22 | 98.6 |
MS.gene32506.t1 | AT5G10080 | 24.580 | 476 | 278 | 21 | 11 | 434 | 9 | 455 | 3.45e-21 | 96.3 |
MS.gene32506.t1 | AT3G52500 | 28.283 | 396 | 222 | 18 | 85 | 433 | 88 | 468 | 8.82e-21 | 94.7 |
MS.gene32506.t1 | AT1G08210 | 26.316 | 399 | 232 | 14 | 85 | 433 | 82 | 468 | 1.25e-20 | 94.7 |
MS.gene32506.t1 | AT3G51360 | 28.846 | 364 | 214 | 15 | 92 | 432 | 104 | 445 | 1.50e-20 | 94.4 |
MS.gene32506.t1 | AT3G51360 | 28.846 | 364 | 214 | 15 | 92 | 432 | 94 | 435 | 1.61e-20 | 94.0 |
MS.gene32506.t1 | AT3G51360 | 28.571 | 364 | 215 | 15 | 92 | 432 | 10 | 351 | 2.14e-20 | 93.2 |
MS.gene32506.t1 | AT3G51360 | 31.000 | 300 | 166 | 13 | 92 | 372 | 104 | 381 | 1.11e-18 | 88.2 |
MS.gene32506.t1 | AT3G51360 | 31.000 | 300 | 166 | 13 | 92 | 372 | 94 | 371 | 1.28e-18 | 88.2 |
MS.gene32506.t1 | AT3G51360 | 31.000 | 300 | 166 | 13 | 92 | 372 | 104 | 381 | 1.39e-18 | 87.8 |
MS.gene32506.t1 | AT3G51360 | 31.000 | 300 | 166 | 13 | 92 | 372 | 94 | 371 | 1.51e-18 | 87.4 |
MS.gene32506.t1 | AT5G07030 | 25.641 | 468 | 284 | 18 | 1 | 433 | 17 | 455 | 1.82e-18 | 87.8 |
MS.gene32506.t1 | AT3G51350 | 25.336 | 446 | 270 | 19 | 27 | 432 | 30 | 452 | 2.41e-18 | 87.8 |
MS.gene32506.t1 | AT3G51340 | 25.967 | 362 | 225 | 14 | 92 | 432 | 108 | 447 | 9.21e-18 | 85.9 |
MS.gene32506.t1 | AT4G35880 | 25.886 | 367 | 223 | 16 | 90 | 432 | 110 | 451 | 2.36e-16 | 81.6 |
MS.gene32506.t1 | AT3G51340 | 27.368 | 285 | 173 | 11 | 92 | 359 | 108 | 375 | 7.59e-16 | 79.3 |
MS.gene32506.t1 | AT3G51360 | 30.859 | 256 | 145 | 10 | 92 | 334 | 104 | 340 | 1.00e-15 | 78.6 |
MS.gene32506.t1 | AT3G51340 | 27.465 | 284 | 172 | 11 | 92 | 358 | 108 | 374 | 1.32e-15 | 78.6 |
MS.gene32506.t1 | AT3G51360 | 28.840 | 319 | 191 | 14 | 128 | 432 | 13 | 309 | 1.84e-15 | 77.8 |
MS.gene32506.t1 | AT3G51360 | 28.840 | 319 | 191 | 14 | 128 | 432 | 13 | 309 | 1.84e-15 | 77.8 |
MS.gene32506.t1 | AT3G51340 | 24.665 | 373 | 228 | 14 | 92 | 432 | 108 | 459 | 2.59e-15 | 78.6 |
MS.gene32506.t1 | AT3G25700 | 27.317 | 205 | 126 | 7 | 39 | 229 | 39 | 234 | 2.65e-15 | 77.4 |
MS.gene32506.t1 | AT3G51330 | 27.174 | 368 | 220 | 16 | 92 | 432 | 107 | 453 | 3.05e-15 | 77.8 |
MS.gene32506.t1 | AT3G51330 | 27.174 | 368 | 220 | 16 | 92 | 432 | 107 | 453 | 3.84e-15 | 77.8 |
MS.gene32506.t1 | AT3G42550 | 36.538 | 104 | 64 | 1 | 87 | 188 | 78 | 181 | 5.70e-14 | 73.9 |
MS.gene32506.t1 | AT4G35880 | 25.914 | 301 | 186 | 13 | 90 | 372 | 110 | 391 | 1.68e-13 | 72.4 |
MS.gene32506.t1 | AT3G51330 | 28.477 | 302 | 179 | 13 | 92 | 373 | 107 | 391 | 3.48e-13 | 71.6 |
Find 96 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGTAGTATGGTGATTT+TGG | 0.132017 | 5.1:-62792077 | None:intergenic |
TCGTGCCAATCATTTCTTTA+AGG | 0.171874 | 5.1:+62792151 | MS.gene32506:CDS |
GCTCGACTTGGTTCCATCTT+TGG | 0.197171 | 5.1:+62793163 | MS.gene32506:CDS |
GGAGATGCCGCTGTGGTTTC+GGG | 0.226097 | 5.1:+62792740 | MS.gene32506:CDS |
TTAAAATGTGCGGTGATTAT+AGG | 0.227453 | 5.1:-62793055 | None:intergenic |
CTCGACTTGGTTCCATCTTT+GGG | 0.248725 | 5.1:+62793164 | MS.gene32506:CDS |
TGGAGATGCCGCTGTGGTTT+CGG | 0.272220 | 5.1:+62792739 | MS.gene32506:CDS |
GGAAACAAAAGAGTAGAATT+TGG | 0.282532 | 5.1:+62792842 | MS.gene32506:CDS |
ATGACATAACCACCCCTATC+AGG | 0.317982 | 5.1:-62792209 | None:intergenic |
TCATTTCCTAAAACAGTGAT+AGG | 0.331434 | 5.1:+62792542 | MS.gene32506:CDS |
GCAACAAGTATACTCAGTTT+TGG | 0.331436 | 5.1:+62792719 | MS.gene32506:CDS |
TGGTTCCATCTTTGGGAACT+TGG | 0.335588 | 5.1:+62793171 | MS.gene32506:CDS |
TCAGGGATTACAGTTGATTC+AGG | 0.336604 | 5.1:-62792191 | None:intergenic |
CATAGGCCGAATTGTTGATT+AGG | 0.338419 | 5.1:-62793001 | None:intergenic |
GAAATGATTGGCACGATTGA+TGG | 0.352741 | 5.1:-62792144 | None:intergenic |
GGTAACATCATAATTGATTC+AGG | 0.364855 | 5.1:+62792890 | MS.gene32506:CDS |
AATCAACTGTAATCCCTGAT+AGG | 0.365381 | 5.1:+62792195 | MS.gene32506:CDS |
TGTCAATATAAAATTAGTTA+TGG | 0.366380 | 5.1:+62792446 | MS.gene32506:CDS |
ACTGATAATGCCGGGACGTT+TGG | 0.369941 | 5.1:+62792572 | MS.gene32506:CDS |
ATACAGGTAGTGACATTGTT+TGG | 0.380232 | 5.1:+62792279 | MS.gene32506:CDS |
GGAAACAGCTGTGGCGGATT+CGG | 0.387089 | 5.1:+62792955 | MS.gene32506:CDS |
ACCCCTCCAACTAAGATATA+CGG | 0.395309 | 5.1:+62792248 | MS.gene32506:CDS |
GGTGTCTCTCATAACACAAT+TGG | 0.397228 | 5.1:+62792634 | MS.gene32506:CDS |
GCAATACCGTATATCTTAGT+TGG | 0.401415 | 5.1:-62792254 | None:intergenic |
TTGAGCCAAGTTCCCAAAGA+TGG | 0.402500 | 5.1:-62793176 | None:intergenic |
CTTGGCTCAACAAAATTTGT+TGG | 0.415034 | 5.1:+62793189 | MS.gene32506:CDS |
CTTCAACACTCGTTACGCTT+TGG | 0.416239 | 5.1:-62793263 | None:intergenic |
GTATAGTTGGCCTTGGAGGC+GGG | 0.418166 | 5.1:+62792609 | MS.gene32506:CDS |
AAAGAAAGAAAGAGTAAGAA+GGG | 0.419999 | 5.1:-62791979 | None:intergenic |
CAAACAATACCCTCAGCAAT+TGG | 0.420182 | 5.1:-62793118 | None:intergenic |
AGGAAATGAAACAGGACTTC+CGG | 0.422734 | 5.1:-62792528 | None:intergenic |
TGGTAAATTCTCTTATTGTT+TGG | 0.432097 | 5.1:+62792670 | MS.gene32506:CDS |
CAACCATCATCTGCTCGACT+TGG | 0.440590 | 5.1:+62793151 | MS.gene32506:CDS |
AAAAGAAAGAAAGAGTAAGA+AGG | 0.440746 | 5.1:-62791980 | None:intergenic |
AGCTCTGGTATAGTTGGCCT+TGG | 0.443123 | 5.1:+62792602 | MS.gene32506:CDS |
GGTATAGTTGGCCTTGGAGG+CGG | 0.452029 | 5.1:+62792608 | MS.gene32506:CDS |
TTCTTTAAGGATTCTGACTC+AGG | 0.452767 | 5.1:+62792164 | MS.gene32506:CDS |
GATGATCCTAATCAACAATT+CGG | 0.454884 | 5.1:+62792995 | MS.gene32506:CDS |
ACGTTTGGAGGCGCAAGCTC+TGG | 0.461431 | 5.1:+62792587 | MS.gene32506:CDS |
ACACAATTGGGATCGTCAAT+TGG | 0.461955 | 5.1:+62792647 | MS.gene32506:CDS |
GCCGCTGTGGTTTCGGGTGA+CGG | 0.464493 | 5.1:+62792746 | MS.gene32506:CDS |
GCTCAACAAAATTTGTTGGT+TGG | 0.464745 | 5.1:+62793193 | MS.gene32506:CDS |
AGAATCCTTAAAGAAATGAT+TGG | 0.474578 | 5.1:-62792156 | None:intergenic |
AAAAGAAGCAATGAAACAAA+GGG | 0.475787 | 5.1:-62792003 | None:intergenic |
CTTGCATTGGAGTCCACCTC+CGG | 0.477636 | 5.1:+62792509 | MS.gene32506:CDS |
TCTGGTATAGTTGGCCTTGG+AGG | 0.477995 | 5.1:+62792605 | MS.gene32506:CDS |
GATAATGCCGGGACGTTTGG+AGG | 0.479068 | 5.1:+62792575 | MS.gene32506:CDS |
AGTTGGCCTTGGAGGCGGGC+CGG | 0.481112 | 5.1:+62792613 | MS.gene32506:CDS |
ACATTAGAAGCATTTAGTGT+TGG | 0.483347 | 5.1:+62792821 | MS.gene32506:CDS |
ACCTTTGTTCCAATTGCTGA+GGG | 0.486978 | 5.1:+62793109 | MS.gene32506:CDS |
ATCCGACGTCTATACTAACT+TGG | 0.497477 | 5.1:+62792934 | MS.gene32506:CDS |
TAGTGTTGACACTCTTGCAT+TGG | 0.507261 | 5.1:+62792496 | MS.gene32506:CDS |
CCTAAAACAGTGATAGGATG+TGG | 0.509378 | 5.1:+62792548 | MS.gene32506:CDS |
TCTTCAGAAGGCGGTGATGA+AGG | 0.511870 | 5.1:+62792869 | MS.gene32506:CDS |
ATCAACTGTAATCCCTGATA+GGG | 0.516703 | 5.1:+62792196 | MS.gene32506:CDS |
GGCGCAAGCTCTGGTATAGT+TGG | 0.524413 | 5.1:+62792596 | MS.gene32506:CDS |
GTGTCTCTCATAACACAATT+GGG | 0.525876 | 5.1:+62792635 | MS.gene32506:CDS |
GAGACACCGGCCCGCCTCCA+AGG | 0.526730 | 5.1:-62792619 | None:intergenic |
ATATACGGTATTGCTGATAC+AGG | 0.526965 | 5.1:+62792263 | MS.gene32506:CDS |
TACCTTTGTTCCAATTGCTG+AGG | 0.535011 | 5.1:+62793108 | MS.gene32506:CDS |
GGATGTGGAACTGATAATGC+CGG | 0.535589 | 5.1:+62792563 | MS.gene32506:CDS |
TACCGTATATCTTAGTTGGA+GGG | 0.552333 | 5.1:-62792250 | None:intergenic |
TGAAACAGGACTTCCGGAGG+TGG | 0.556306 | 5.1:-62792522 | None:intergenic |
GAATTTGGAGGCTCTTCAGA+AGG | 0.558028 | 5.1:+62792857 | MS.gene32506:CDS |
GAACCAAGTCGAGCAGATGA+TGG | 0.559364 | 5.1:-62793154 | None:intergenic |
CAAGTCGAGCAGATGATGGT+TGG | 0.560415 | 5.1:-62793150 | None:intergenic |
GTTTGACTCCTTGTTCAACA+AGG | 0.566764 | 5.1:-62792696 | None:intergenic |
ATACCGTATATCTTAGTTGG+AGG | 0.568782 | 5.1:-62792251 | None:intergenic |
ACCGTATATCTTAGTTGGAG+GGG | 0.570548 | 5.1:-62792249 | None:intergenic |
TGACATAACCACCCCTATCA+GGG | 0.581426 | 5.1:-62792208 | None:intergenic |
AACAAAAGAGTAGAATTTGG+AGG | 0.583454 | 5.1:+62792845 | MS.gene32506:CDS |
TGGTTGTAACATTGTTCACA+AGG | 0.591014 | 5.1:-62792314 | None:intergenic |
TTTGGTGCCCTTGTTGAACA+AGG | 0.591411 | 5.1:+62792688 | MS.gene32506:CDS |
TACGCTTTGGTACAATCAGT+AGG | 0.595820 | 5.1:-62793250 | None:intergenic |
GATGTGGAACTGATAATGCC+GGG | 0.599376 | 5.1:+62792564 | MS.gene32506:CDS |
ACCCTCAGCAATTGGAACAA+AGG | 0.601197 | 5.1:-62793110 | None:intergenic |
TTTGACTCCTTGTTCAACAA+GGG | 0.608133 | 5.1:-62792695 | None:intergenic |
TTGATGTCAAACTATAGCAT+AGG | 0.608908 | 5.1:-62793018 | None:intergenic |
TATGTCATGACGTATTCAGT+TGG | 0.616181 | 5.1:+62792224 | MS.gene32506:CDS |
AAGTTAGTATAGACGTCGGA+TGG | 0.622448 | 5.1:-62792932 | None:intergenic |
TACTAACTTGGAAACAGCTG+TGG | 0.626482 | 5.1:+62792946 | MS.gene32506:CDS |
TAACTTGGAAACAGCTGTGG+CGG | 0.627343 | 5.1:+62792949 | MS.gene32506:CDS |
GCTTGCGCCTCCAAACGTCC+CGG | 0.632742 | 5.1:-62792582 | None:intergenic |
ATCGGCACCTTTAAAATGTG+CGG | 0.635428 | 5.1:-62793065 | None:intergenic |
AATAGAATGCAACTCAACAT+CGG | 0.645414 | 5.1:-62793083 | None:intergenic |
CAATTGGGATCGTCAATTGG+TGG | 0.645590 | 5.1:+62792650 | MS.gene32506:CDS |
AATTGTGTTATGAGAGACAC+CGG | 0.647126 | 5.1:-62792632 | None:intergenic |
TTTGGAGGCTCTTCAGAAGG+CGG | 0.647672 | 5.1:+62792860 | MS.gene32506:CDS |
GTGCTGCATCGACAAAGTGT+TGG | 0.649567 | 5.1:-62792115 | None:intergenic |
TCAACTGTAATCCCTGATAG+GGG | 0.660378 | 5.1:+62792197 | MS.gene32506:CDS |
TGACATAGCTTAGACGCACA+AGG | 0.661062 | 5.1:-62792386 | None:intergenic |
ACTGTAATCCCTGATAGGGG+TGG | 0.665786 | 5.1:+62792200 | MS.gene32506:CDS |
TTCCAAGTTAGTATAGACGT+CGG | 0.680500 | 5.1:-62792936 | None:intergenic |
GGAGATAATTCACATTCACG+AGG | 0.714093 | 5.1:+62792467 | MS.gene32506:CDS |
AAATGAAACAGGACTTCCGG+AGG | 0.727776 | 5.1:-62792525 | None:intergenic |
ACCGTCACCCGAAACCACAG+CGG | 0.745897 | 5.1:-62792747 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTCAATATAAAATTAGTTA+TGG | + | chr5.1:62792446-62792465 | MS.gene32506:CDS | 15.0% |
!!! | TTTTATATTGACAAGAATTT+TGG | - | chr5.1:62792439-62792458 | None:intergenic | 15.0% |
!!! | AAAGTGTTGGTATTTATTTT+CGG | - | chr5.1:62792105-62792124 | None:intergenic | 20.0% |
!!! | GATTTTGATGGATTAAAAAT+GGG | - | chr5.1:62792347-62792366 | None:intergenic | 20.0% |
!!! | TGATTTTGATGGATTAAAAA+TGG | - | chr5.1:62792348-62792367 | None:intergenic | 20.0% |
! | AAAAAGAAGCAATGAAACAA+AGG | - | chr5.1:62792007-62792026 | None:intergenic | 25.0% |
! | AAAAGAAAGAAAGAGTAAGA+AGG | - | chr5.1:62791983-62792002 | None:intergenic | 25.0% |
! | AAAAGAAGCAATGAAACAAA+GGG | - | chr5.1:62792006-62792025 | None:intergenic | 25.0% |
! | AAAGAAAGAAAGAGTAAGAA+GGG | - | chr5.1:62791982-62792001 | None:intergenic | 25.0% |
! | AATGTCAAAAAGTAGAAAAC+TGG | - | chr5.1:62792806-62792825 | None:intergenic | 25.0% |
! | AGAATCCTTAAAGAAATGAT+TGG | - | chr5.1:62792159-62792178 | None:intergenic | 25.0% |
! | TGGTAAATTCTCTTATTGTT+TGG | + | chr5.1:62792670-62792689 | MS.gene32506:CDS | 25.0% |
!! | TTGTAACTAGATGATTTTGA+TGG | - | chr5.1:62792359-62792378 | None:intergenic | 25.0% |
AACAAAAGAGTAGAATTTGG+AGG | + | chr5.1:62792845-62792864 | MS.gene32506:CDS | 30.0% | |
AATAGAATGCAACTCAACAT+CGG | - | chr5.1:62793086-62793105 | None:intergenic | 30.0% | |
GATGATCCTAATCAACAATT+CGG | + | chr5.1:62792995-62793014 | MS.gene32506:CDS | 30.0% | |
GGAAACAAAAGAGTAGAATT+TGG | + | chr5.1:62792842-62792861 | MS.gene32506:CDS | 30.0% | |
TCATTTCCTAAAACAGTGAT+AGG | + | chr5.1:62792542-62792561 | MS.gene32506:CDS | 30.0% | |
TTAAAATGTGCGGTGATTAT+AGG | - | chr5.1:62793058-62793077 | None:intergenic | 30.0% | |
TTGATGTCAAACTATAGCAT+AGG | - | chr5.1:62793021-62793040 | None:intergenic | 30.0% | |
! | ATAATCACCGCACATTTTAA+AGG | + | chr5.1:62793058-62793077 | MS.gene32506:CDS | 30.0% |
! | GGTAACATCATAATTGATTC+AGG | + | chr5.1:62792890-62792909 | MS.gene32506:CDS | 30.0% |
! | GTTTGTAGTATGGTGATTTT+GGG | - | chr5.1:62792079-62792098 | None:intergenic | 30.0% |
! | TTTGTAGTATGGTGATTTTG+GGG | - | chr5.1:62792078-62792097 | None:intergenic | 30.0% |
!! | ACATTAGAAGCATTTAGTGT+TGG | + | chr5.1:62792821-62792840 | MS.gene32506:CDS | 30.0% |
!! | TGTTGGTATTTATTTTCGGT+AGG | - | chr5.1:62792101-62792120 | None:intergenic | 30.0% |
!!! | ACTGTTTTAGGAAATGAAAC+AGG | - | chr5.1:62792539-62792558 | None:intergenic | 30.0% |
AATCAACTGTAATCCCTGAT+AGG | + | chr5.1:62792195-62792214 | MS.gene32506:CDS | 35.0% | |
AATTGTGTTATGAGAGACAC+CGG | - | chr5.1:62792635-62792654 | None:intergenic | 35.0% | |
ATACAGGTAGTGACATTGTT+TGG | + | chr5.1:62792279-62792298 | MS.gene32506:CDS | 35.0% | |
ATACCGTATATCTTAGTTGG+AGG | - | chr5.1:62792254-62792273 | None:intergenic | 35.0% | |
ATATACGGTATTGCTGATAC+AGG | + | chr5.1:62792263-62792282 | MS.gene32506:CDS | 35.0% | |
ATCAACTGTAATCCCTGATA+GGG | + | chr5.1:62792196-62792215 | MS.gene32506:CDS | 35.0% | |
CTTGGCTCAACAAAATTTGT+TGG | + | chr5.1:62793189-62793208 | MS.gene32506:CDS | 35.0% | |
GATTAAAAATGGGAGTGGTT+TGG | - | chr5.1:62792337-62792356 | None:intergenic | 35.0% | |
GCAATACCGTATATCTTAGT+TGG | - | chr5.1:62792257-62792276 | None:intergenic | 35.0% | |
GTGTCTCTCATAACACAATT+GGG | + | chr5.1:62792635-62792654 | MS.gene32506:CDS | 35.0% | |
TACCGTATATCTTAGTTGGA+GGG | - | chr5.1:62792253-62792272 | None:intergenic | 35.0% | |
TATGTCATGACGTATTCAGT+TGG | + | chr5.1:62792224-62792243 | MS.gene32506:CDS | 35.0% | |
TCGTGCCAATCATTTCTTTA+AGG | + | chr5.1:62792151-62792170 | MS.gene32506:CDS | 35.0% | |
TGGTTGTAACATTGTTCACA+AGG | - | chr5.1:62792317-62792336 | None:intergenic | 35.0% | |
TTCCAAGTTAGTATAGACGT+CGG | - | chr5.1:62792939-62792958 | None:intergenic | 35.0% | |
TTTGACTCCTTGTTCAACAA+GGG | - | chr5.1:62792698-62792717 | None:intergenic | 35.0% | |
! | GCAACAAGTATACTCAGTTT+TGG | + | chr5.1:62792719-62792738 | MS.gene32506:CDS | 35.0% |
! | GGTTTGTAGTATGGTGATTT+TGG | - | chr5.1:62792080-62792099 | None:intergenic | 35.0% |
! | TTCTTTAAGGATTCTGACTC+AGG | + | chr5.1:62792164-62792183 | MS.gene32506:CDS | 35.0% |
! | TTTTCGGTAGGTTTGTAGTA+TGG | - | chr5.1:62792089-62792108 | None:intergenic | 35.0% |
!! | GCTCAACAAAATTTGTTGGT+TGG | + | chr5.1:62793193-62793212 | MS.gene32506:CDS | 35.0% |
!! | TGATGGATTAAAAATGGGAG+TGG | - | chr5.1:62792342-62792361 | None:intergenic | 35.0% |
!! | TTTTCTCATGCTCTAAGCAA+TGG | + | chr5.1:62792023-62792042 | MS.gene32506:CDS | 35.0% |
!!! | GGAGAGTCTTTTTTTACTAG+AGG | - | chr5.1:62792785-62792804 | None:intergenic | 35.0% |
AAGTTAGTATAGACGTCGGA+TGG | - | chr5.1:62792935-62792954 | None:intergenic | 40.0% | |
ACACAATTGGGATCGTCAAT+TGG | + | chr5.1:62792647-62792666 | MS.gene32506:CDS | 40.0% | |
ACCCCTCCAACTAAGATATA+CGG | + | chr5.1:62792248-62792267 | MS.gene32506:CDS | 40.0% | |
ACCGTATATCTTAGTTGGAG+GGG | - | chr5.1:62792252-62792271 | None:intergenic | 40.0% | |
ACCTTTGTTCCAATTGCTGA+GGG | + | chr5.1:62793109-62793128 | MS.gene32506:CDS | 40.0% | |
AGGAAATGAAACAGGACTTC+CGG | - | chr5.1:62792531-62792550 | None:intergenic | 40.0% | |
ATCCGACGTCTATACTAACT+TGG | + | chr5.1:62792934-62792953 | MS.gene32506:CDS | 40.0% | |
CAAACAATACCCTCAGCAAT+TGG | - | chr5.1:62793121-62793140 | None:intergenic | 40.0% | |
CCTAAAACAGTGATAGGATG+TGG | + | chr5.1:62792548-62792567 | MS.gene32506:CDS | 40.0% | |
GAAATGATTGGCACGATTGA+TGG | - | chr5.1:62792147-62792166 | None:intergenic | 40.0% | |
GGAGATAATTCACATTCACG+AGG | + | chr5.1:62792467-62792486 | MS.gene32506:CDS | 40.0% | |
GGTGTCTCTCATAACACAAT+TGG | + | chr5.1:62792634-62792653 | MS.gene32506:CDS | 40.0% | |
GTTTGACTCCTTGTTCAACA+AGG | - | chr5.1:62792699-62792718 | None:intergenic | 40.0% | |
TACCTTTGTTCCAATTGCTG+AGG | + | chr5.1:62793108-62793127 | MS.gene32506:CDS | 40.0% | |
TACGCTTTGGTACAATCAGT+AGG | - | chr5.1:62793253-62793272 | None:intergenic | 40.0% | |
TACTAACTTGGAAACAGCTG+TGG | + | chr5.1:62792946-62792965 | MS.gene32506:CDS | 40.0% | |
TCAACTGTAATCCCTGATAG+GGG | + | chr5.1:62792197-62792216 | MS.gene32506:CDS | 40.0% | |
! | CATAGGCCGAATTGTTGATT+AGG | - | chr5.1:62793004-62793023 | None:intergenic | 40.0% |
! | CCACATCCTATCACTGTTTT+AGG | - | chr5.1:62792551-62792570 | None:intergenic | 40.0% |
! | TCAGGGATTACAGTTGATTC+AGG | - | chr5.1:62792194-62792213 | None:intergenic | 40.0% |
!! | AGAATTTTGGTCACTGCAAG+AGG | - | chr5.1:62792426-62792445 | None:intergenic | 40.0% |
!! | ATCGGCACCTTTAAAATGTG+CGG | - | chr5.1:62793068-62793087 | None:intergenic | 40.0% |
!! | TAGTGTTGACACTCTTGCAT+TGG | + | chr5.1:62792496-62792515 | MS.gene32506:CDS | 40.0% |
AAATGAAACAGGACTTCCGG+AGG | - | chr5.1:62792528-62792547 | None:intergenic | 45.0% | |
ACCCTCAGCAATTGGAACAA+AGG | - | chr5.1:62793113-62793132 | None:intergenic | 45.0% | |
ATGACATAACCACCCCTATC+AGG | - | chr5.1:62792212-62792231 | None:intergenic | 45.0% | |
CAATTGGGATCGTCAATTGG+TGG | + | chr5.1:62792650-62792669 | MS.gene32506:CDS | 45.0% | |
GAATTTGGAGGCTCTTCAGA+AGG | + | chr5.1:62792857-62792876 | MS.gene32506:CDS | 45.0% | |
TAACTTGGAAACAGCTGTGG+CGG | + | chr5.1:62792949-62792968 | MS.gene32506:CDS | 45.0% | |
TGACATAACCACCCCTATCA+GGG | - | chr5.1:62792211-62792230 | None:intergenic | 45.0% | |
TGACATAGCTTAGACGCACA+AGG | - | chr5.1:62792389-62792408 | None:intergenic | 45.0% | |
TTGAGCCAAGTTCCCAAAGA+TGG | - | chr5.1:62793179-62793198 | None:intergenic | 45.0% | |
! | GATGTGGAACTGATAATGCC+GGG | + | chr5.1:62792564-62792583 | MS.gene32506:CDS | 45.0% |
! | GGATGTGGAACTGATAATGC+CGG | + | chr5.1:62792563-62792582 | MS.gene32506:CDS | 45.0% |
! | TGGTTCCATCTTTGGGAACT+TGG | + | chr5.1:62793171-62793190 | MS.gene32506:CDS | 45.0% |
!! | ATGGTGATTTTGGGGAGTCA+CGG | - | chr5.1:62792070-62792089 | None:intergenic | 45.0% |
!! | CTCGACTTGGTTCCATCTTT+GGG | + | chr5.1:62793164-62793183 | MS.gene32506:CDS | 45.0% |
!! | TTTGGTGCCCTTGTTGAACA+AGG | + | chr5.1:62792688-62792707 | MS.gene32506:CDS | 45.0% |
ACTGTAATCCCTGATAGGGG+TGG | + | chr5.1:62792200-62792219 | MS.gene32506:CDS | 50.0% | |
CAACCATCATCTGCTCGACT+TGG | + | chr5.1:62793151-62793170 | MS.gene32506:CDS | 50.0% | |
GAACCAAGTCGAGCAGATGA+TGG | - | chr5.1:62793157-62793176 | None:intergenic | 50.0% | |
TCTTCAGAAGGCGGTGATGA+AGG | + | chr5.1:62792869-62792888 | MS.gene32506:CDS | 50.0% | |
TTTGGAGGCTCTTCAGAAGG+CGG | + | chr5.1:62792860-62792879 | MS.gene32506:CDS | 50.0% | |
! | ACTGATAATGCCGGGACGTT+TGG | + | chr5.1:62792572-62792591 | MS.gene32506:CDS | 50.0% |
! | AGCTCTGGTATAGTTGGCCT+TGG | + | chr5.1:62792602-62792621 | MS.gene32506:CDS | 50.0% |
! | CAAGTCGAGCAGATGATGGT+TGG | - | chr5.1:62793153-62793172 | None:intergenic | 50.0% |
! | GTGCTGCATCGACAAAGTGT+TGG | - | chr5.1:62792118-62792137 | None:intergenic | 50.0% |
!! | GCTCGACTTGGTTCCATCTT+TGG | + | chr5.1:62793163-62793182 | MS.gene32506:CDS | 50.0% |
!! | TCTGGTATAGTTGGCCTTGG+AGG | + | chr5.1:62792605-62792624 | MS.gene32506:CDS | 50.0% |
CTTGCATTGGAGTCCACCTC+CGG | + | chr5.1:62792509-62792528 | MS.gene32506:CDS | 55.0% | |
GATAATGCCGGGACGTTTGG+AGG | + | chr5.1:62792575-62792594 | MS.gene32506:CDS | 55.0% | |
TGAAACAGGACTTCCGGAGG+TGG | - | chr5.1:62792525-62792544 | None:intergenic | 55.0% | |
TGGAGATGCCGCTGTGGTTT+CGG | + | chr5.1:62792739-62792758 | MS.gene32506:CDS | 55.0% | |
! | GGCGCAAGCTCTGGTATAGT+TGG | + | chr5.1:62792596-62792615 | MS.gene32506:CDS | 55.0% |
!! | GGAAACAGCTGTGGCGGATT+CGG | + | chr5.1:62792955-62792974 | MS.gene32506:CDS | 55.0% |
!! | GGTATAGTTGGCCTTGGAGG+CGG | + | chr5.1:62792608-62792627 | MS.gene32506:CDS | 55.0% |
!! | GTATAGTTGGCCTTGGAGGC+GGG | + | chr5.1:62792609-62792628 | MS.gene32506:CDS | 55.0% |
!! | GTGATTTTGGGGAGTCACGG+TGG | - | chr5.1:62792067-62792086 | None:intergenic | 55.0% |
!!! | CAGTTTTGGAGATGCCGCTG+TGG | + | chr5.1:62792733-62792752 | MS.gene32506:CDS | 55.0% |
ACCGTCACCCGAAACCACAG+CGG | - | chr5.1:62792750-62792769 | None:intergenic | 60.0% | |
GGAGATGCCGCTGTGGTTTC+GGG | + | chr5.1:62792740-62792759 | MS.gene32506:CDS | 60.0% | |
! | ACGTTTGGAGGCGCAAGCTC+TGG | + | chr5.1:62792587-62792606 | MS.gene32506:CDS | 60.0% |
GCTTGCGCCTCCAAACGTCC+CGG | - | chr5.1:62792585-62792604 | None:intergenic | 65.0% | |
! | GCCGCTGTGGTTTCGGGTGA+CGG | + | chr5.1:62792746-62792765 | MS.gene32506:CDS | 65.0% |
!! | AGTTGGCCTTGGAGGCGGGC+CGG | + | chr5.1:62792613-62792632 | MS.gene32506:CDS | 70.0% |
GAGACACCGGCCCGCCTCCA+AGG | - | chr5.1:62792622-62792641 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 62791966 | 62793273 | 62791966 | ID=MS.gene32506 |
chr5.1 | mRNA | 62791966 | 62793273 | 62791966 | ID=MS.gene32506.t1;Parent=MS.gene32506 |
chr5.1 | exon | 62791966 | 62793273 | 62791966 | ID=MS.gene32506.t1.exon1;Parent=MS.gene32506.t1 |
chr5.1 | CDS | 62791966 | 62793273 | 62791966 | ID=cds.MS.gene32506.t1;Parent=MS.gene32506.t1 |
Gene Sequence |
Protein sequence |