Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32534.t1 | XP_003616443.2 | 97.2 | 493 | 14 | 0 | 1 | 493 | 1 | 493 | 1.50E-271 | 944.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32534.t1 | Q9CAY3 | 73.0 | 492 | 129 | 3 | 3 | 492 | 12 | 501 | 4.2e-206 | 718.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32534.t1 | G7KGS4 | 97.2 | 493 | 14 | 0 | 1 | 493 | 1 | 493 | 1.1e-271 | 944.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053568 | MS.gene32534 | 0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene058015 | MS.gene32534 | 0.816366 | 5.74E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene019646 | MS.gene32534 | PPI |
| MS.gene056794 | MS.gene32534 | PPI |
| MS.gene84826 | MS.gene32534 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32534.t1 | MTR_5g080360 | 97.160 | 493 | 14 | 0 | 1 | 493 | 1 | 493 | 0.0 | 982 |
| MS.gene32534.t1 | MTR_1g040500 | 51.572 | 477 | 218 | 5 | 3 | 472 | 21 | 491 | 8.74e-167 | 483 |
| MS.gene32534.t1 | MTR_7g067380 | 51.055 | 474 | 223 | 3 | 2 | 472 | 24 | 491 | 1.00e-161 | 468 |
| MS.gene32534.t1 | MTR_4g415290 | 50.418 | 478 | 227 | 4 | 2 | 475 | 21 | 492 | 4.64e-158 | 458 |
| MS.gene32534.t1 | MTR_8g030620 | 47.059 | 476 | 242 | 5 | 2 | 472 | 27 | 497 | 8.76e-146 | 427 |
| MS.gene32534.t1 | MTR_5g091660 | 44.676 | 479 | 251 | 6 | 2 | 476 | 65 | 533 | 1.41e-139 | 412 |
| MS.gene32534.t1 | MTR_3g448430 | 43.478 | 483 | 240 | 12 | 3 | 472 | 49 | 511 | 2.16e-126 | 378 |
| MS.gene32534.t1 | MTR_5g061520 | 40.461 | 477 | 267 | 8 | 3 | 473 | 17 | 482 | 2.82e-118 | 356 |
| MS.gene32534.t1 | MTR_1g086650 | 41.372 | 481 | 255 | 12 | 3 | 472 | 65 | 529 | 3.61e-116 | 353 |
| MS.gene32534.t1 | MTR_3g048330 | 54.851 | 268 | 116 | 3 | 209 | 472 | 7 | 273 | 2.70e-95 | 290 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32534.t1 | AT3G11430 | 72.967 | 492 | 129 | 3 | 3 | 492 | 12 | 501 | 0.0 | 748 |
| MS.gene32534.t1 | AT5G06090 | 72.154 | 492 | 133 | 3 | 3 | 492 | 10 | 499 | 0.0 | 717 |
| MS.gene32534.t1 | AT2G38110 | 48.319 | 476 | 234 | 3 | 3 | 472 | 25 | 494 | 4.53e-147 | 430 |
| MS.gene32534.t1 | AT4G00400 | 46.541 | 477 | 245 | 6 | 2 | 473 | 22 | 493 | 1.20e-139 | 411 |
| MS.gene32534.t1 | AT1G01610 | 47.490 | 478 | 240 | 7 | 2 | 473 | 22 | 494 | 6.69e-138 | 407 |
| MS.gene32534.t1 | AT1G06520 | 43.320 | 494 | 244 | 9 | 2 | 472 | 104 | 584 | 3.00e-133 | 398 |
| MS.gene32534.t1 | AT3G11325 | 60.345 | 290 | 82 | 1 | 201 | 490 | 134 | 390 | 1.99e-117 | 351 |
| MS.gene32534.t1 | AT3G11325 | 56.190 | 105 | 46 | 0 | 12 | 116 | 9 | 113 | 1.28e-33 | 131 |
| MS.gene32534.t1 | AT3G11325 | 60.345 | 290 | 82 | 1 | 201 | 490 | 131 | 387 | 2.47e-117 | 350 |
| MS.gene32534.t1 | AT3G11325 | 56.190 | 105 | 46 | 0 | 12 | 116 | 6 | 110 | 1.19e-33 | 131 |
| MS.gene32534.t1 | AT1G02390 | 41.988 | 493 | 246 | 15 | 3 | 472 | 52 | 527 | 1.22e-111 | 341 |
| MS.gene32534.t1 | AT4G01950 | 41.322 | 484 | 258 | 14 | 3 | 472 | 46 | 517 | 2.83e-108 | 332 |
| MS.gene32534.t1 | AT4G01950 | 41.513 | 489 | 250 | 15 | 3 | 472 | 74 | 545 | 6.42e-108 | 332 |
Find 149 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCACATGTCAAGATTATT+TGG | 0.150256 | 5.1:-62520010 | MS.gene32534:CDS |
| CAATATCCTTTGAACATAAT+TGG | 0.202872 | 5.1:+62519469 | None:intergenic |
| GCTGGCTATCATTGTGCTTT+TGG | 0.221316 | 5.1:+62520188 | None:intergenic |
| AGATCATCCATGAAGAATTT+TGG | 0.231300 | 5.1:+62521574 | None:intergenic |
| TTACGTGCAGATGAAGTAAT+TGG | 0.248051 | 5.1:-62521454 | MS.gene32534:CDS |
| TTACTCGAAAAGATAAATAT+AGG | 0.294416 | 5.1:-62519415 | MS.gene32534:CDS |
| CAATTATGTTCAAAGGATAT+TGG | 0.310416 | 5.1:-62519468 | MS.gene32534:CDS |
| TCCCAAGGTTAATCTGATTA+TGG | 0.312514 | 5.1:+62520057 | None:intergenic |
| ATACTCTATTTCTCGGTTAT+CGG | 0.316529 | 5.1:-62519846 | MS.gene32534:CDS |
| ATAGAGCACTAAATCGTAAA+AGG | 0.319770 | 5.1:+62519693 | None:intergenic |
| TTATAGTACCTGGCAAAGTT+TGG | 0.321027 | 5.1:+62521270 | None:intergenic |
| TCGCGACATGTCGTTCCTTC+TGG | 0.322328 | 5.1:+62519722 | None:intergenic |
| AAAAGATAAATATAGGGTTT+TGG | 0.322909 | 5.1:-62519408 | MS.gene32534:CDS |
| CCGCCTGCGGAGGGAGGGAG+AGG | 0.341597 | 5.1:+62519959 | None:intergenic |
| CCTCCCTACTAATCATCCTT+TGG | 0.351925 | 5.1:-62520102 | MS.gene32534:CDS |
| TACTCGAAAAGATAAATATA+GGG | 0.353770 | 5.1:-62519414 | MS.gene32534:CDS |
| CCTCCCTCCGCAGGCGGCCC+CGG | 0.355972 | 5.1:-62519953 | MS.gene32534:CDS |
| AACAAATGCAACCACCATTT+AGG | 0.356648 | 5.1:-62520216 | MS.gene32534:CDS |
| TGCAAGGGGTTGGAAGGGTT+TGG | 0.357093 | 5.1:-62519600 | MS.gene32534:CDS |
| CATCGTGTCTTGTACTTCAT+TGG | 0.372552 | 5.1:-62519372 | MS.gene32534:CDS |
| ATGATTAGTAGGGAGGTTAA+TGG | 0.373547 | 5.1:+62520109 | None:intergenic |
| CCATACCCAACTTTGGAACT+TGG | 0.375224 | 5.1:+62521332 | None:intergenic |
| GTGTACTCACCGCACTCTAA+TGG | 0.376230 | 5.1:-62519918 | MS.gene32534:CDS |
| TAATCCTATGGCCCGTGATT+CGG | 0.383281 | 5.1:-62521705 | MS.gene32534:CDS |
| TACTTTCTTGAACCAGTTGC+CGG | 0.390520 | 5.1:-62519534 | MS.gene32534:CDS |
| AATAGGTTTGGTTTAGCTAC+AGG | 0.398808 | 5.1:-62521415 | MS.gene32534:CDS |
| GACGAACATGTGGCTTCAAC+CGG | 0.402068 | 5.1:+62519515 | None:intergenic |
| ATGTGAGGAATGGCCCAAAA+AGG | 0.402197 | 5.1:+62520025 | None:intergenic |
| GTTAGTCTCACGGTAGGAAT+GGG | 0.403818 | 5.1:+62519812 | None:intergenic |
| AATCTCCGATTTATGAATTC+CGG | 0.404562 | 5.1:+62521621 | None:intergenic |
| GTAACCTCATAAACTGGTCT+TGG | 0.404829 | 5.1:+62519554 | None:intergenic |
| CCGGATGAGGTCGGAGAAGC+TGG | 0.406448 | 5.1:+62520170 | None:intergenic |
| AATAACCAAGTTCCAAAGTT+GGG | 0.409025 | 5.1:-62521337 | MS.gene32534:CDS |
| TTCTTTCTCCAAACTTTGCC+AGG | 0.409775 | 5.1:-62521278 | MS.gene32534:intron |
| ACAAACAACTAAATCTCCTT+TGG | 0.410080 | 5.1:+62519745 | None:intergenic |
| AGGATATTGGCTGCAACTCT+AGG | 0.410254 | 5.1:-62519455 | MS.gene32534:CDS |
| AAGAAAGTAACCTCATAAAC+TGG | 0.410853 | 5.1:+62519548 | None:intergenic |
| TGAAGTAATTGGGAGTGAAT+TGG | 0.411804 | 5.1:-62521443 | MS.gene32534:CDS |
| CTTCATGTTAGTAGCGTTCG+AGG | 0.429967 | 5.1:-62521758 | MS.gene32534:CDS |
| AGCGTCCACATTTCGCATCC+TGG | 0.432122 | 5.1:+62519790 | None:intergenic |
| CGGGGCCGCCTGCGGAGGGA+GGG | 0.433345 | 5.1:+62519954 | None:intergenic |
| CCGGGGCCGCCTGCGGAGGG+AGG | 0.436986 | 5.1:+62519953 | None:intergenic |
| GAATCCAAAGGATGATTAGT+AGG | 0.437047 | 5.1:+62520098 | None:intergenic |
| GGGTTCATGAAGAAGAAAAC+CGG | 0.438572 | 5.1:+62519575 | None:intergenic |
| TATGGCTAGTAATATACCTA+TGG | 0.440019 | 5.1:+62520075 | None:intergenic |
| GGTTAGTCTCACGGTAGGAA+TGG | 0.440830 | 5.1:+62519811 | None:intergenic |
| AGCCTTGCCATACCCAACTT+TGG | 0.442432 | 5.1:+62521325 | None:intergenic |
| CAATAACCAAGTTCCAAAGT+TGG | 0.452601 | 5.1:-62521338 | MS.gene32534:CDS |
| TAACCTCATAAACTGGTCTT+GGG | 0.452875 | 5.1:+62519555 | None:intergenic |
| CGGTAACATACTCTATTTCT+CGG | 0.456428 | 5.1:-62519853 | MS.gene32534:CDS |
| CACATCGTGTGGACTCTTCC+CGG | 0.458052 | 5.1:+62519493 | None:intergenic |
| GAACCCAAGACCAGTTTATG+AGG | 0.459966 | 5.1:-62519558 | MS.gene32534:CDS |
| ATGTGGCTTCAACCGGCAAC+TGG | 0.460408 | 5.1:+62519522 | None:intergenic |
| ACACCGGGGCCGCCTGCGGA+GGG | 0.460445 | 5.1:+62519950 | None:intergenic |
| TTAGTAGCGTTCGAGGCCTC+AGG | 0.462333 | 5.1:-62521751 | MS.gene32534:CDS |
| CGGCCGTCGTGGAAGATAAC+CGG | 0.466207 | 5.1:+62520151 | None:intergenic |
| GAACCCTACTCTATAGTTCA+TGG | 0.467040 | 5.1:+62519637 | None:intergenic |
| GTTGAAGCCACATGTTCGTC+CGG | 0.467761 | 5.1:-62519512 | MS.gene32534:CDS |
| TCGTTCTGCTATTAATCCTA+TGG | 0.468159 | 5.1:-62521717 | MS.gene32534:CDS |
| ATTGGTTGATCAAGTAAAGA+AGG | 0.479552 | 5.1:-62519354 | MS.gene32534:CDS |
| GATTTAGTTGTTTGTCCAGA+AGG | 0.481237 | 5.1:-62519737 | MS.gene32534:CDS |
| GTGTAGGCCGCTTCACCAAT+CGG | 0.482482 | 5.1:+62520131 | None:intergenic |
| CGATTTATGAATTCCGGCTA+CGG | 0.482955 | 5.1:+62521627 | None:intergenic |
| ACTCTATAGTTCATGGCAAC+CGG | 0.483007 | 5.1:+62519644 | None:intergenic |
| CCAGCTTCTCCGACCTCATC+CGG | 0.484716 | 5.1:-62520170 | MS.gene32534:CDS |
| AACCCCTTGCAGTGGTTGCA+TGG | 0.489933 | 5.1:+62519612 | None:intergenic |
| TACGTGCAGATGAAGTAATT+GGG | 0.490722 | 5.1:-62521453 | MS.gene32534:CDS |
| CCACCTCTCCCTCCCTCCGC+AGG | 0.490767 | 5.1:-62519962 | MS.gene32534:CDS |
| CACTTATGAGAAAAGGGTTG+TGG | 0.495510 | 5.1:-62521524 | MS.gene32534:CDS |
| AACACCGGGGCCGCCTGCGG+AGG | 0.495682 | 5.1:+62519949 | None:intergenic |
| CCTCCATGCCGAGCATCTCT+AGG | 0.500161 | 5.1:+62521680 | None:intergenic |
| TCAGTTGTCTCTGAATTAGA+AGG | 0.500272 | 5.1:-62521814 | MS.gene32534:CDS |
| TTTAGCAACTCTTTCAGAAA+CGG | 0.500932 | 5.1:+62521366 | None:intergenic |
| CGTAGCCGGAATTCATAAAT+CGG | 0.506588 | 5.1:-62521626 | MS.gene32534:CDS |
| GGGTTGGAAGGGTTTGGACC+CGG | 0.513399 | 5.1:-62519594 | MS.gene32534:CDS |
| GGTGGCAAAGTTATTGTGAA+GGG | 0.518531 | 5.1:-62519989 | MS.gene32534:CDS |
| ATCTCTAGGAACCGAATCAC+GGG | 0.519411 | 5.1:+62521694 | None:intergenic |
| ATGATCTTTGTAGCCGTAGC+CGG | 0.521019 | 5.1:-62521640 | MS.gene32534:CDS |
| TATCTTCCACGACGGCCGAT+TGG | 0.522796 | 5.1:-62520146 | MS.gene32534:CDS |
| AACCACTGCAAGGGGTTGGA+AGG | 0.523750 | 5.1:-62519606 | MS.gene32534:CDS |
| CCAAGTTCCAAAGTTGGGTA+TGG | 0.524716 | 5.1:-62521332 | MS.gene32534:CDS |
| TATGGTGAAGAGGTTTGTTG+AGG | 0.528470 | 5.1:-62521482 | MS.gene32534:CDS |
| AGCCATAATCAGATTAACCT+TGG | 0.529275 | 5.1:-62520059 | MS.gene32534:CDS |
| GCCATAATCAGATTAACCTT+GGG | 0.530102 | 5.1:-62520058 | MS.gene32534:CDS |
| CTTCCATGCAACCACTGCAA+GGG | 0.532313 | 5.1:-62519615 | MS.gene32534:CDS |
| ATGCAACCACTGCAAGGGGT+TGG | 0.533517 | 5.1:-62519610 | MS.gene32534:CDS |
| GGATATTGGCTGCAACTCTA+GGG | 0.537098 | 5.1:-62519454 | MS.gene32534:CDS |
| CCTGCGGAGGGAGGGAGAGG+TGG | 0.537490 | 5.1:+62519962 | None:intergenic |
| AACCTCTTCACCATAACTCC+TGG | 0.538516 | 5.1:+62521490 | None:intergenic |
| GAACGCTACTAACATGAAGT+AGG | 0.542737 | 5.1:+62521762 | None:intergenic |
| GAAATAGAGTATGTTACCGC+TGG | 0.548665 | 5.1:+62519857 | None:intergenic |
| TGGTGGCAAAGTTATTGTGA+AGG | 0.548955 | 5.1:-62519990 | MS.gene32534:CDS |
| ACCACTGCAAGGGGTTGGAA+GGG | 0.554018 | 5.1:-62519605 | MS.gene32534:CDS |
| ACATAATTGGCCACATCGTG+TGG | 0.555416 | 5.1:+62519482 | None:intergenic |
| TCGCATCCTGGTTAGTCTCA+CGG | 0.556814 | 5.1:+62519802 | None:intergenic |
| ACGACGGCCGATTGGTGAAG+CGG | 0.557445 | 5.1:-62520138 | MS.gene32534:CDS |
| TTCCATGCAACCACTGCAAG+GGG | 0.559446 | 5.1:-62519614 | MS.gene32534:CDS |
| CACATGTCAAGATTATTTGG+TGG | 0.561180 | 5.1:-62520007 | MS.gene32534:CDS |
| GCACTAAATCGTAAAAGGAA+AGG | 0.562800 | 5.1:+62519698 | None:intergenic |
| TAATCTTGACATGTGAGGAA+TGG | 0.563106 | 5.1:+62520015 | None:intergenic |
| ATGTGGCCAATTATGTTCAA+AGG | 0.565821 | 5.1:-62519475 | MS.gene32534:CDS |
| ATCATCCTTTGGATTCCCAT+AGG | 0.567783 | 5.1:-62520091 | MS.gene32534:CDS |
| TGCCAGGAGTTATGGTGAAG+AGG | 0.568451 | 5.1:-62521492 | MS.gene32534:CDS |
| ACCCTTCCAACCCCTTGCAG+TGG | 0.568618 | 5.1:+62519604 | None:intergenic |
| AAAAGGTAAAATGGCTCCCA+AGG | 0.569333 | 5.1:+62520042 | None:intergenic |
| GGAAGATAACCGGATGAGGT+CGG | 0.569958 | 5.1:+62520161 | None:intergenic |
| ATGATCTTGACATGGAAGCT+TGG | 0.575350 | 5.1:-62521558 | MS.gene32534:CDS |
| TTGAAGCCACATGTTCGTCC+GGG | 0.575686 | 5.1:-62519511 | MS.gene32534:CDS |
| TTCCAAAGTTGGGTATGGCA+AGG | 0.576401 | 5.1:-62521327 | MS.gene32534:CDS |
| ATGGCTAGTAATATACCTAT+GGG | 0.576541 | 5.1:+62520076 | None:intergenic |
| TTGCCATGAACTATAGAGTA+GGG | 0.580288 | 5.1:-62519640 | MS.gene32534:CDS |
| CTTCATGGATGATCTTGACA+TGG | 0.581073 | 5.1:-62521566 | MS.gene32534:CDS |
| TCTTCCATGCAACCACTGCA+AGG | 0.581170 | 5.1:-62519616 | MS.gene32534:CDS |
| AGTAGGGAGGTTAATGGTGT+AGG | 0.581490 | 5.1:+62520115 | None:intergenic |
| AAGAACACCGGGGCCGCCTG+CGG | 0.582203 | 5.1:+62519946 | None:intergenic |
| CATCTCTAGGAACCGAATCA+CGG | 0.582902 | 5.1:+62521693 | None:intergenic |
| TACGTTGGAGGACGGAAGAG+AGG | 0.586719 | 5.1:+62519885 | None:intergenic |
| AGGACGGAAGAGAGGACCAC+AGG | 0.587085 | 5.1:+62519893 | None:intergenic |
| GGAACCGAATCACGGGCCAT+AGG | 0.587795 | 5.1:+62521701 | None:intergenic |
| ATAAAATATGAGTTATCCAA+AGG | 0.588127 | 5.1:-62519761 | MS.gene32534:CDS |
| GTTCCTAGAGATGCTCGGCA+TGG | 0.589970 | 5.1:-62521683 | MS.gene32534:CDS |
| TCGTGGAAGATAACCGGATG+AGG | 0.592639 | 5.1:+62520157 | None:intergenic |
| AATCCAAAGGATGATTAGTA+GGG | 0.594053 | 5.1:+62520099 | None:intergenic |
| ACTAACCAGGATGCGAAATG+TGG | 0.596166 | 5.1:-62519795 | MS.gene32534:CDS |
| ACTCTTCCCGGACGAACATG+TGG | 0.597450 | 5.1:+62519505 | None:intergenic |
| GCTTCACCAATCGGCCGTCG+TGG | 0.597938 | 5.1:+62520140 | None:intergenic |
| TTAGTCTCACGGTAGGAATG+GGG | 0.605101 | 5.1:+62519813 | None:intergenic |
| CCTCTCCCTCCCTCCGCAGG+CGG | 0.606101 | 5.1:-62519959 | MS.gene32534:CDS |
| CCAAATAATCTTGACATGTG+AGG | 0.613846 | 5.1:+62520010 | None:intergenic |
| CCAAAGGATGATTAGTAGGG+AGG | 0.617133 | 5.1:+62520102 | None:intergenic |
| TAGTCTCACGGTAGGAATGG+GGG | 0.621006 | 5.1:+62519814 | None:intergenic |
| GATCATTATTATGGTAAACA+AGG | 0.622764 | 5.1:+62519314 | None:intergenic |
| ACTCACAGATCGGATAGTAC+CGG | 0.630574 | 5.1:-62519663 | MS.gene32534:CDS |
| GGACGGAAGAGAGGACCACA+GGG | 0.633576 | 5.1:+62519894 | None:intergenic |
| TTCCTACCGTGAGACTAACC+AGG | 0.633579 | 5.1:-62519808 | MS.gene32534:CDS |
| ATTCGGTTCCTAGAGATGCT+CGG | 0.633640 | 5.1:-62521688 | MS.gene32534:CDS |
| GTTGCCATGAACTATAGAGT+AGG | 0.638820 | 5.1:-62519641 | MS.gene32534:CDS |
| CGGGAAGAGTCCACACGATG+TGG | 0.640851 | 5.1:-62519492 | MS.gene32534:CDS |
| GGTTCATGAAGAAGAAAACC+GGG | 0.655673 | 5.1:+62519576 | None:intergenic |
| TATTTGCAGAACTCACAGAT+CGG | 0.656460 | 5.1:-62519673 | MS.gene32534:CDS |
| CATCCGGTTATCTTCCACGA+CGG | 0.663414 | 5.1:-62520154 | MS.gene32534:CDS |
| ATATACCTATGGGAATCCAA+AGG | 0.666680 | 5.1:+62520086 | None:intergenic |
| CCTAGAGATGCTCGGCATGG+AGG | 0.670608 | 5.1:-62521680 | MS.gene32534:CDS |
| GGTTGATCAAGTAAAGAAGG+TGG | 0.673976 | 5.1:-62519351 | MS.gene32534:CDS |
| ATCCTGGTTAGTCTCACGGT+AGG | 0.682353 | 5.1:+62519806 | None:intergenic |
| AACGAAGCGAATCAAACCTG+AGG | 0.685586 | 5.1:+62521735 | None:intergenic |
| CCACAGGGTCCATTAGAGTG+CGG | 0.712721 | 5.1:+62519909 | None:intergenic |
| CCTCCAACGTAAAACTCCAG+CGG | 0.722705 | 5.1:-62519873 | MS.gene32534:CDS |
| CCGCACTCTAATGGACCCTG+TGG | 0.755400 | 5.1:-62519909 | MS.gene32534:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTTTTTTTTTTTATTAG+TGG | - | chr5.1:62520418-62520437 | MS.gene32534:intron | 10.0% |
| !! | AATAGATTAAAAAGAATACA+CGG | + | chr5.1:62520513-62520532 | None:intergenic | 15.0% |
| !!! | TATTTCAACGAATAATTTTT+TGG | - | chr5.1:62519961-62519980 | MS.gene32534:CDS | 15.0% |
| !! | ATAAAATATGAGTTATCCAA+AGG | - | chr5.1:62521381-62521400 | MS.gene32534:CDS | 20.0% |
| !! | ATAGATTAAAAAGAATACAC+GGG | + | chr5.1:62520512-62520531 | None:intergenic | 20.0% |
| !! | ATGAATGAAAAAATTCGATT+TGG | - | chr5.1:62519922-62519941 | MS.gene32534:CDS | 20.0% |
| !! | CTTATAAGAAACAACAAAAT+TGG | + | chr5.1:62520684-62520703 | None:intergenic | 20.0% |
| !! | GAAACATATTTAAACAAAGA+CGG | + | chr5.1:62520048-62520067 | None:intergenic | 20.0% |
| !! | GTTAAATAAATTATAGTACC+TGG | + | chr5.1:62519885-62519904 | None:intergenic | 20.0% |
| !! | TAAATAGACTCGAAAATTAT+GGG | + | chr5.1:62520608-62520627 | None:intergenic | 20.0% |
| !! | TACTCGAAAAGATAAATATA+GGG | - | chr5.1:62521728-62521747 | MS.gene32534:CDS | 20.0% |
| !! | TTACTCGAAAAGATAAATAT+AGG | - | chr5.1:62521727-62521746 | MS.gene32534:CDS | 20.0% |
| !!! | AAAAGATAAATATAGGGTTT+TGG | - | chr5.1:62521734-62521753 | MS.gene32534:CDS | 20.0% |
| !!! | AATTGTATACGAACAAATTT+TGG | + | chr5.1:62520138-62520157 | None:intergenic | 20.0% |
| !!! | AGAAACAAAATTTTATTCCA+AGG | - | chr5.1:62520306-62520325 | MS.gene32534:intron | 20.0% |
| !!! | ATTGTATACGAACAAATTTT+GGG | + | chr5.1:62520137-62520156 | None:intergenic | 20.0% |
| !!! | TTTTTCTCAAAATTGTCATT+TGG | - | chr5.1:62520013-62520032 | MS.gene32534:CDS | 20.0% |
| ! | ACAACTATAAGCCATATTAT+AGG | + | chr5.1:62520267-62520286 | None:intergenic | 25.0% |
| ! | CAATATCCTTTGAACATAAT+TGG | + | chr5.1:62521676-62521695 | None:intergenic | 25.0% |
| ! | CAATTATGTTCAAAGGATAT+TGG | - | chr5.1:62521674-62521693 | MS.gene32534:CDS | 25.0% |
| ! | GTAAATAGACTCGAAAATTA+TGG | + | chr5.1:62520609-62520628 | None:intergenic | 25.0% |
| ! | TAAGTGTAAGTATTCCAAAA+GGG | - | chr5.1:62520234-62520253 | MS.gene32534:intron | 25.0% |
| ! | TAATATGGCTTATAGTTGTT+TGG | - | chr5.1:62520268-62520287 | MS.gene32534:intron | 25.0% |
| ! | TTAAGTGTAAGTATTCCAAA+AGG | - | chr5.1:62520233-62520252 | MS.gene32534:intron | 25.0% |
| !! | AGTTTTACCAAAATTCTTCA+TGG | - | chr5.1:62519561-62519580 | MS.gene32534:CDS | 25.0% |
| !! | TTTTAGCACTTATGAGAAAA+GGG | - | chr5.1:62519612-62519631 | MS.gene32534:CDS | 25.0% |
| !!! | ACAAGATTTTGATACTAAAC+AGG | + | chr5.1:62520631-62520650 | None:intergenic | 25.0% |
| !!! | TATGGGTTAAATACGTTTTT+TGG | + | chr5.1:62520591-62520610 | None:intergenic | 25.0% |
| !!! | TTTGCCTTTACTTTTATGTT+CGG | - | chr5.1:62520158-62520177 | MS.gene32534:CDS | 25.0% |
| !!! | TTTTTAGCACTTATGAGAAA+AGG | - | chr5.1:62519611-62519630 | MS.gene32534:CDS | 25.0% |
| AAGAAAGTAACCTCATAAAC+TGG | + | chr5.1:62521597-62521616 | None:intergenic | 30.0% | |
| AATAACCAAGTTCCAAAGTT+GGG | - | chr5.1:62519805-62519824 | MS.gene32534:CDS | 30.0% | |
| AATCCAAAGGATGATTAGTA+GGG | + | chr5.1:62521046-62521065 | None:intergenic | 30.0% | |
| AATCTCCGATTTATGAATTC+CGG | + | chr5.1:62519524-62519543 | None:intergenic | 30.0% | |
| ACAAACAACTAAATCTCCTT+TGG | + | chr5.1:62521400-62521419 | None:intergenic | 30.0% | |
| ATGACCGAACATAAAAGTAA+AGG | + | chr5.1:62520165-62520184 | None:intergenic | 30.0% | |
| ATGGCTAGTAATATACCTAT+GGG | + | chr5.1:62521069-62521088 | None:intergenic | 30.0% | |
| ATTGGTTGATCAAGTAAAGA+AGG | - | chr5.1:62521788-62521807 | MS.gene32534:CDS | 30.0% | |
| TATGGCTAGTAATATACCTA+TGG | + | chr5.1:62521070-62521089 | None:intergenic | 30.0% | |
| TTCATTGCAATTTCTCACTT+TGG | + | chr5.1:62519907-62519926 | None:intergenic | 30.0% | |
| TTTAGCAACTCTTTCAGAAA+CGG | + | chr5.1:62519779-62519798 | None:intergenic | 30.0% | |
| ! | AGATCATCCATGAAGAATTT+TGG | + | chr5.1:62519571-62519590 | None:intergenic | 30.0% |
| ! | ATACTCTATTTCTCGGTTAT+CGG | - | chr5.1:62521296-62521315 | MS.gene32534:CDS | 30.0% |
| ! | ATAGAGCACTAAATCGTAAA+AGG | + | chr5.1:62521452-62521471 | None:intergenic | 30.0% |
| !!! | ATAAATATAGGGTTTTGGCT+GGG | - | chr5.1:62521739-62521758 | MS.gene32534:CDS | 30.0% |
| !!! | GAATTGGTTTTCAATAGGTT+TGG | - | chr5.1:62519715-62519734 | MS.gene32534:CDS | 30.0% |
| AACAAAAATGCCAGGAGTTA+TGG | - | chr5.1:62519642-62519661 | MS.gene32534:CDS | 35.0% | |
| AACAAATGCAACCACCATTT+AGG | - | chr5.1:62520926-62520945 | MS.gene32534:intron | 35.0% | |
| AATGGCCCAAAAAGGTAAAA+TGG | + | chr5.1:62521112-62521131 | None:intergenic | 35.0% | |
| AGCCATAATCAGATTAACCT+TGG | - | chr5.1:62521083-62521102 | MS.gene32534:intron | 35.0% | |
| AGGGTGAACTTCCTATAATA+TGG | - | chr5.1:62520253-62520272 | MS.gene32534:intron | 35.0% | |
| AGTACACACAAAAAGAACAC+CGG | + | chr5.1:62521211-62521230 | None:intergenic | 35.0% | |
| ATATACCTATGGGAATCCAA+AGG | + | chr5.1:62521059-62521078 | None:intergenic | 35.0% | |
| ATGATTAGTAGGGAGGTTAA+TGG | + | chr5.1:62521036-62521055 | None:intergenic | 35.0% | |
| ATGTGGCCAATTATGTTCAA+AGG | - | chr5.1:62521667-62521686 | MS.gene32534:CDS | 35.0% | |
| CAATAACCAAGTTCCAAAGT+TGG | - | chr5.1:62519804-62519823 | MS.gene32534:CDS | 35.0% | |
| CACATGTCAAGATTATTTGG+TGG | - | chr5.1:62521135-62521154 | MS.gene32534:intron | 35.0% | |
| CCAAATAATCTTGACATGTG+AGG | + | chr5.1:62521135-62521154 | None:intergenic | 35.0% | |
| CCTCACATGTCAAGATTATT+TGG | - | chr5.1:62521132-62521151 | MS.gene32534:intron | 35.0% | |
| CTCAGATAAAGACTCTTTCA+CGG | - | chr5.1:62520358-62520377 | MS.gene32534:intron | 35.0% | |
| GAATCCAAAGGATGATTAGT+AGG | + | chr5.1:62521047-62521066 | None:intergenic | 35.0% | |
| GATTTAGTTGTTTGTCCAGA+AGG | - | chr5.1:62521405-62521424 | MS.gene32534:CDS | 35.0% | |
| GCACTAAATCGTAAAAGGAA+AGG | + | chr5.1:62521447-62521466 | None:intergenic | 35.0% | |
| GCCATAATCAGATTAACCTT+GGG | - | chr5.1:62521084-62521103 | MS.gene32534:intron | 35.0% | |
| TAATCTTGACATGTGAGGAA+TGG | + | chr5.1:62521130-62521149 | None:intergenic | 35.0% | |
| TACGTGCAGATGAAGTAATT+GGG | - | chr5.1:62519689-62519708 | MS.gene32534:CDS | 35.0% | |
| TATTTGCAGAACTCACAGAT+CGG | - | chr5.1:62521469-62521488 | MS.gene32534:CDS | 35.0% | |
| TCAGATAAAGACTCTTTCAC+GGG | - | chr5.1:62520359-62520378 | MS.gene32534:intron | 35.0% | |
| TCAGTTGTCTCTGAATTAGA+AGG | - | chr5.1:62519328-62519347 | MS.gene32534:CDS | 35.0% | |
| TCCCAAGGTTAATCTGATTA+TGG | + | chr5.1:62521088-62521107 | None:intergenic | 35.0% | |
| TCGTTCTGCTATTAATCCTA+TGG | - | chr5.1:62519425-62519444 | MS.gene32534:CDS | 35.0% | |
| TGAAGTAATTGGGAGTGAAT+TGG | - | chr5.1:62519699-62519718 | MS.gene32534:CDS | 35.0% | |
| TTACGTGCAGATGAAGTAAT+TGG | - | chr5.1:62519688-62519707 | MS.gene32534:CDS | 35.0% | |
| TTATAGTACCTGGCAAAGTT+TGG | + | chr5.1:62519875-62519894 | None:intergenic | 35.0% | |
| TTGCCATGAACTATAGAGTA+GGG | - | chr5.1:62521502-62521521 | MS.gene32534:CDS | 35.0% | |
| TTGGTTCATAAATACGATGG+GGG | - | chr5.1:62520383-62520402 | MS.gene32534:intron | 35.0% | |
| ! | AATAGGTTTGGTTTAGCTAC+AGG | - | chr5.1:62519727-62519746 | MS.gene32534:CDS | 35.0% |
| ! | CGGTAACATACTCTATTTCT+CGG | - | chr5.1:62521289-62521308 | MS.gene32534:CDS | 35.0% |
| ! | GACATATTTTGTATGTGTGC+AGG | - | chr5.1:62520903-62520922 | MS.gene32534:intron | 35.0% |
| ! | GGTTGGTTCATAAATACGAT+GGG | - | chr5.1:62520381-62520400 | MS.gene32534:intron | 35.0% |
| ! | GTTGGTTCATAAATACGATG+GGG | - | chr5.1:62520382-62520401 | MS.gene32534:intron | 35.0% |
| ! | TTATAGGAAGTTCACCCTTT+TGG | + | chr5.1:62520251-62520270 | None:intergenic | 35.0% |
| !! | GATAAATATAGGGTTTTGGC+TGG | - | chr5.1:62521738-62521757 | MS.gene32534:CDS | 35.0% |
| !! | TAACCTCATAAACTGGTCTT+GGG | + | chr5.1:62521590-62521609 | None:intergenic | 35.0% |
| !! | TTATAGTTGTTTGGTGCTTG+TGG | - | chr5.1:62520277-62520296 | MS.gene32534:intron | 35.0% |
| !!! | GGAGTGAATTGGTTTTCAAT+AGG | - | chr5.1:62519710-62519729 | MS.gene32534:CDS | 35.0% |
| AAAAGGTAAAATGGCTCCCA+AGG | + | chr5.1:62521103-62521122 | None:intergenic | 40.0% | |
| ACTCTATAGTTCATGGCAAC+CGG | + | chr5.1:62521501-62521520 | None:intergenic | 40.0% | |
| ATCATCCTTTGGATTCCCAT+AGG | - | chr5.1:62521051-62521070 | MS.gene32534:intron | 40.0% | |
| ATGATCTTGACATGGAAGCT+TGG | - | chr5.1:62519584-62519603 | MS.gene32534:CDS | 40.0% | |
| CACTTATGAGAAAAGGGTTG+TGG | - | chr5.1:62519618-62519637 | MS.gene32534:CDS | 40.0% | |
| CAGATAAAGACTCTTTCACG+GGG | - | chr5.1:62520360-62520379 | MS.gene32534:intron | 40.0% | |
| CATCGTGTCTTGTACTTCAT+TGG | - | chr5.1:62521770-62521789 | MS.gene32534:CDS | 40.0% | |
| CGATTTATGAATTCCGGCTA+CGG | + | chr5.1:62519518-62519537 | None:intergenic | 40.0% | |
| CGTAGCCGGAATTCATAAAT+CGG | - | chr5.1:62519516-62519535 | MS.gene32534:CDS | 40.0% | |
| CTTCATGGATGATCTTGACA+TGG | - | chr5.1:62519576-62519595 | MS.gene32534:CDS | 40.0% | |
| GAAATAGAGTATGTTACCGC+TGG | + | chr5.1:62521288-62521307 | None:intergenic | 40.0% | |
| GAACCCTACTCTATAGTTCA+TGG | + | chr5.1:62521508-62521527 | None:intergenic | 40.0% | |
| GAACGCTACTAACATGAAGT+AGG | + | chr5.1:62519383-62519402 | None:intergenic | 40.0% | |
| GGGTTCATGAAGAAGAAAAC+CGG | + | chr5.1:62521570-62521589 | None:intergenic | 40.0% | |
| GGTGGCAAAGTTATTGTGAA+GGG | - | chr5.1:62521153-62521172 | MS.gene32534:intron | 40.0% | |
| GGTTCATGAAGAAGAAAACC+GGG | + | chr5.1:62521569-62521588 | None:intergenic | 40.0% | |
| GGTTGATCAAGTAAAGAAGG+TGG | - | chr5.1:62521791-62521810 | MS.gene32534:CDS | 40.0% | |
| GTACACACAAAAAGAACACC+GGG | + | chr5.1:62521210-62521229 | None:intergenic | 40.0% | |
| GTTGCCATGAACTATAGAGT+AGG | - | chr5.1:62521501-62521520 | MS.gene32534:CDS | 40.0% | |
| GTTGTGGTAACAAAAATGCC+AGG | - | chr5.1:62519634-62519653 | MS.gene32534:CDS | 40.0% | |
| TACACACAAAAAGAACACCG+GGG | + | chr5.1:62521209-62521228 | None:intergenic | 40.0% | |
| TACTTTCTTGAACCAGTTGC+CGG | - | chr5.1:62521608-62521627 | MS.gene32534:CDS | 40.0% | |
| TGATGTTTGCATGTTCACCT+TGG | + | chr5.1:62520326-62520345 | None:intergenic | 40.0% | |
| TGGTGGCAAAGTTATTGTGA+AGG | - | chr5.1:62521152-62521171 | MS.gene32534:intron | 40.0% | |
| TTCTTTCTCCAAACTTTGCC+AGG | - | chr5.1:62519864-62519883 | MS.gene32534:CDS | 40.0% | |
| ! | GTAACCTCATAAACTGGTCT+TGG | + | chr5.1:62521591-62521610 | None:intergenic | 40.0% |
| !! | GGGAGCCATTTTACCTTTTT+GGG | - | chr5.1:62521104-62521123 | MS.gene32534:intron | 40.0% |
| !! | GGGTTGGTTCATAAATACGA+TGG | - | chr5.1:62520380-62520399 | MS.gene32534:intron | 40.0% |
| !! | TATGGTGAAGAGGTTTGTTG+AGG | - | chr5.1:62519660-62519679 | MS.gene32534:CDS | 40.0% |
| !! | TGGGAGCCATTTTACCTTTT+TGG | - | chr5.1:62521103-62521122 | MS.gene32534:intron | 40.0% |
| !!! | TGCTTTTGGCTTGTCCTAAA+TGG | + | chr5.1:62520943-62520962 | None:intergenic | 40.0% |
| !!! | TTTTGGCTTGTCCTAAATGG+TGG | + | chr5.1:62520940-62520959 | None:intergenic | 40.0% |
| AAATACGATGGGGGAGAACT+TGG | - | chr5.1:62520392-62520411 | MS.gene32534:intron | 45.0% | |
| AACCTCTTCACCATAACTCC+TGG | + | chr5.1:62519655-62519674 | None:intergenic | 45.0% | |
| AACGAAGCGAATCAAACCTG+AGG | + | chr5.1:62519410-62519429 | None:intergenic | 45.0% | |
| AATACGATGGGGGAGAACTT+GGG | - | chr5.1:62520393-62520412 | MS.gene32534:intron | 45.0% | |
| ACATAATTGGCCACATCGTG+TGG | + | chr5.1:62521663-62521682 | None:intergenic | 45.0% | |
| ACTAACCAGGATGCGAAATG+TGG | - | chr5.1:62521347-62521366 | MS.gene32534:CDS | 45.0% | |
| ACTCACAGATCGGATAGTAC+CGG | - | chr5.1:62521479-62521498 | MS.gene32534:CDS | 45.0% | |
| AGTAGGGAGGTTAATGGTGT+AGG | + | chr5.1:62521030-62521049 | None:intergenic | 45.0% | |
| ATGATCTTTGTAGCCGTAGC+CGG | - | chr5.1:62519502-62519521 | MS.gene32534:CDS | 45.0% | |
| ATGTGAGGAATGGCCCAAAA+AGG | + | chr5.1:62521120-62521139 | None:intergenic | 45.0% | |
| ATTCGGTTCCTAGAGATGCT+CGG | - | chr5.1:62519454-62519473 | MS.gene32534:CDS | 45.0% | |
| CCAAAGGATGATTAGTAGGG+AGG | + | chr5.1:62521043-62521062 | None:intergenic | 45.0% | |
| CCAAGTTCCAAAGTTGGGTA+TGG | - | chr5.1:62519810-62519829 | MS.gene32534:CDS | 45.0% | |
| CCTCCCTACTAATCATCCTT+TGG | - | chr5.1:62521040-62521059 | MS.gene32534:intron | 45.0% | |
| CTTCATGTTAGTAGCGTTCG+AGG | - | chr5.1:62519384-62519403 | MS.gene32534:CDS | 45.0% | |
| GAACCCAAGACCAGTTTATG+AGG | - | chr5.1:62521584-62521603 | MS.gene32534:CDS | 45.0% | |
| TAAAGACTCTTTCACGGGGT+TGG | - | chr5.1:62520364-62520383 | MS.gene32534:intron | 45.0% | |
| TAATCCTATGGCCCGTGATT+CGG | - | chr5.1:62519437-62519456 | MS.gene32534:CDS | 45.0% | |
| TTAGTCTCACGGTAGGAATG+GGG | + | chr5.1:62521332-62521351 | None:intergenic | 45.0% | |
| TTCCAAAGTTGGGTATGGCA+AGG | - | chr5.1:62519815-62519834 | MS.gene32534:CDS | 45.0% | |
| ! | AGGATATTGGCTGCAACTCT+AGG | - | chr5.1:62521687-62521706 | MS.gene32534:CDS | 45.0% |
| ! | ATCTCTAGGAACCGAATCAC+GGG | + | chr5.1:62519451-62519470 | None:intergenic | 45.0% |
| ! | CATCTCTAGGAACCGAATCA+CGG | + | chr5.1:62519452-62519471 | None:intergenic | 45.0% |
| ! | GCTGGCTATCATTGTGCTTT+TGG | + | chr5.1:62520957-62520976 | None:intergenic | 45.0% |
| ! | GGATATTGGCTGCAACTCTA+GGG | - | chr5.1:62521688-62521707 | MS.gene32534:CDS | 45.0% |
| ! | GTTAGTCTCACGGTAGGAAT+GGG | + | chr5.1:62521333-62521352 | None:intergenic | 45.0% |
| ! | TGGAGTTTTACGTTGGAGGA+CGG | + | chr5.1:62521268-62521287 | None:intergenic | 45.0% |
| ! | TTACCGCTGGAGTTTTACGT+TGG | + | chr5.1:62521275-62521294 | None:intergenic | 45.0% |
| !! | CCATACCCAACTTTGGAACT+TGG | + | chr5.1:62519813-62519832 | None:intergenic | 45.0% |
| !! | AATTAATTTACTTTAAATAT+TGG | - | chr5.1:62520858-62520877 | MS.gene32534:intron | 5.0% |
| !! | ATTAATTTACTTTAAATATT+GGG | - | chr5.1:62520859-62520878 | MS.gene32534:intron | 5.0% |
| AGCCTTGCCATACCCAACTT+TGG | + | chr5.1:62519820-62519839 | None:intergenic | 50.0% | |
| CATCCGGTTATCTTCCACGA+CGG | - | chr5.1:62520988-62521007 | MS.gene32534:intron | 50.0% | |
| CCTCCAACGTAAAACTCCAG+CGG | - | chr5.1:62521269-62521288 | MS.gene32534:intron | 50.0% | |
| CTTCCATGCAACCACTGCAA+GGG | - | chr5.1:62521527-62521546 | MS.gene32534:CDS | 50.0% | |
| GACGAACATGTGGCTTCAAC+CGG | + | chr5.1:62521630-62521649 | None:intergenic | 50.0% | |
| GGAAGATAACCGGATGAGGT+CGG | + | chr5.1:62520984-62521003 | None:intergenic | 50.0% | |
| GTGTACTCACCGCACTCTAA+TGG | - | chr5.1:62521224-62521243 | MS.gene32534:intron | 50.0% | |
| GTTGAAGCCACATGTTCGTC+CGG | - | chr5.1:62521630-62521649 | MS.gene32534:CDS | 50.0% | |
| TAGTCTCACGGTAGGAATGG+GGG | + | chr5.1:62521331-62521350 | None:intergenic | 50.0% | |
| TCGTGGAAGATAACCGGATG+AGG | + | chr5.1:62520988-62521007 | None:intergenic | 50.0% | |
| TCTTCCATGCAACCACTGCA+AGG | - | chr5.1:62521526-62521545 | MS.gene32534:CDS | 50.0% | |
| TGCCAGGAGTTATGGTGAAG+AGG | - | chr5.1:62519650-62519669 | MS.gene32534:CDS | 50.0% | |
| TTCCATGCAACCACTGCAAG+GGG | - | chr5.1:62521528-62521547 | MS.gene32534:CDS | 50.0% | |
| TTCCTACCGTGAGACTAACC+AGG | - | chr5.1:62521334-62521353 | MS.gene32534:CDS | 50.0% | |
| TTGAAGCCACATGTTCGTCC+GGG | - | chr5.1:62521631-62521650 | MS.gene32534:CDS | 50.0% | |
| !! | ATCCTGGTTAGTCTCACGGT+AGG | + | chr5.1:62521339-62521358 | None:intergenic | 50.0% |
| !! | GGTTAGTCTCACGGTAGGAA+TGG | + | chr5.1:62521334-62521353 | None:intergenic | 50.0% |
| !! | TCGCATCCTGGTTAGTCTCA+CGG | + | chr5.1:62521343-62521362 | None:intergenic | 50.0% |
| !!! | AGGGTTTTGGCTGGGAATGA+TGG | - | chr5.1:62521747-62521766 | MS.gene32534:CDS | 50.0% |
| AACCACTGCAAGGGGTTGGA+AGG | - | chr5.1:62521536-62521555 | MS.gene32534:CDS | 55.0% | |
| AACCCCTTGCAGTGGTTGCA+TGG | + | chr5.1:62521533-62521552 | None:intergenic | 55.0% | |
| ACCACTGCAAGGGGTTGGAA+GGG | - | chr5.1:62521537-62521556 | MS.gene32534:CDS | 55.0% | |
| ACTCTTCCCGGACGAACATG+TGG | + | chr5.1:62521640-62521659 | None:intergenic | 55.0% | |
| AGCGTCCACATTTCGCATCC+TGG | + | chr5.1:62521355-62521374 | None:intergenic | 55.0% | |
| ATGCAACCACTGCAAGGGGT+TGG | - | chr5.1:62521532-62521551 | MS.gene32534:CDS | 55.0% | |
| ATGTGGCTTCAACCGGCAAC+TGG | + | chr5.1:62521623-62521642 | None:intergenic | 55.0% | |
| CACATCGTGTGGACTCTTCC+CGG | + | chr5.1:62521652-62521671 | None:intergenic | 55.0% | |
| CCACAGGGTCCATTAGAGTG+CGG | + | chr5.1:62521236-62521255 | None:intergenic | 55.0% | |
| GTGTAGGCCGCTTCACCAAT+CGG | + | chr5.1:62521014-62521033 | None:intergenic | 55.0% | |
| GTTCCTAGAGATGCTCGGCA+TGG | - | chr5.1:62519459-62519478 | MS.gene32534:CDS | 55.0% | |
| TACGTTGGAGGACGGAAGAG+AGG | + | chr5.1:62521260-62521279 | None:intergenic | 55.0% | |
| TATCTTCCACGACGGCCGAT+TGG | - | chr5.1:62520996-62521015 | MS.gene32534:intron | 55.0% | |
| TCGCGACATGTCGTTCCTTC+TGG | + | chr5.1:62521423-62521442 | None:intergenic | 55.0% | |
| TGCAAGGGGTTGGAAGGGTT+TGG | - | chr5.1:62521542-62521561 | MS.gene32534:CDS | 55.0% | |
| TTAGTAGCGTTCGAGGCCTC+AGG | - | chr5.1:62519391-62519410 | MS.gene32534:CDS | 55.0% | |
| ! | CCGCTGGAGTTTTACGTTGG+AGG | + | chr5.1:62521272-62521291 | None:intergenic | 55.0% |
| ACCCTTCCAACCCCTTGCAG+TGG | + | chr5.1:62521541-62521560 | None:intergenic | 60.0% | |
| ACGACGGCCGATTGGTGAAG+CGG | - | chr5.1:62521004-62521023 | MS.gene32534:intron | 60.0% | |
| AGGACGGAAGAGAGGACCAC+AGG | + | chr5.1:62521252-62521271 | None:intergenic | 60.0% | |
| CCAGCTTCTCCGACCTCATC+CGG | - | chr5.1:62520972-62520991 | MS.gene32534:intron | 60.0% | |
| CCTAGAGATGCTCGGCATGG+AGG | - | chr5.1:62519462-62519481 | MS.gene32534:CDS | 60.0% | |
| CCTCCATGCCGAGCATCTCT+AGG | + | chr5.1:62519465-62519484 | None:intergenic | 60.0% | |
| CGGCCGTCGTGGAAGATAAC+CGG | + | chr5.1:62520994-62521013 | None:intergenic | 60.0% | |
| CGGGAAGAGTCCACACGATG+TGG | - | chr5.1:62521650-62521669 | MS.gene32534:CDS | 60.0% | |
| GGAACCGAATCACGGGCCAT+AGG | + | chr5.1:62519444-62519463 | None:intergenic | 60.0% | |
| GGACGGAAGAGAGGACCACA+GGG | + | chr5.1:62521251-62521270 | None:intergenic | 60.0% | |
| GGGTTGGAAGGGTTTGGACC+CGG | - | chr5.1:62521548-62521567 | MS.gene32534:CDS | 60.0% | |
| TCACGGTAGGAATGGGGGAG+AGG | + | chr5.1:62521326-62521345 | None:intergenic | 60.0% | |
| ! | CCGCACTCTAATGGACCCTG+TGG | - | chr5.1:62521233-62521252 | MS.gene32534:intron | 60.0% |
| CCGGATGAGGTCGGAGAAGC+TGG | + | chr5.1:62520975-62520994 | None:intergenic | 65.0% | |
| GCTTCACCAATCGGCCGTCG+TGG | + | chr5.1:62521005-62521024 | None:intergenic | 65.0% | |
| AAGAACACCGGGGCCGCCTG+CGG | + | chr5.1:62521199-62521218 | None:intergenic | 70.0% | |
| CCACCTCTCCCTCCCTCCGC+AGG | - | chr5.1:62521180-62521199 | MS.gene32534:intron | 75.0% | |
| CCTCTCCCTCCCTCCGCAGG+CGG | - | chr5.1:62521183-62521202 | MS.gene32534:intron | 75.0% | |
| CCTGCGGAGGGAGGGAGAGG+TGG | + | chr5.1:62521183-62521202 | None:intergenic | 75.0% | |
| ! | AACACCGGGGCCGCCTGCGG+AGG | + | chr5.1:62521196-62521215 | None:intergenic | 80.0% |
| ! | ACACCGGGGCCGCCTGCGGA+GGG | + | chr5.1:62521195-62521214 | None:intergenic | 80.0% |
| ! | CCGCCTGCGGAGGGAGGGAG+AGG | + | chr5.1:62521186-62521205 | None:intergenic | 80.0% |
| ! | CCTCCCTCCGCAGGCGGCCC+CGG | - | chr5.1:62521189-62521208 | MS.gene32534:intron | 85.0% |
| ! | CGGGGCCGCCTGCGGAGGGA+GGG | + | chr5.1:62521191-62521210 | None:intergenic | 85.0% |
| ! | CCGGGGCCGCCTGCGGAGGG+AGG | + | chr5.1:62521192-62521211 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 62519322 | 62521842 | 62519322 | ID=MS.gene32534 |
| chr5.1 | mRNA | 62519322 | 62521842 | 62519322 | ID=MS.gene32534.t1;Parent=MS.gene32534 |
| chr5.1 | exon | 62521279 | 62521842 | 62521279 | ID=MS.gene32534.t1.exon1;Parent=MS.gene32534.t1 |
| chr5.1 | CDS | 62521279 | 62521842 | 62521279 | ID=cds.MS.gene32534.t1;Parent=MS.gene32534.t1 |
| chr5.1 | exon | 62519322 | 62520239 | 62519322 | ID=MS.gene32534.t1.exon2;Parent=MS.gene32534.t1 |
| chr5.1 | CDS | 62519322 | 62520239 | 62519322 | ID=cds.MS.gene32534.t1;Parent=MS.gene32534.t1 |
| Gene Sequence |
| Protein sequence |
