AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32629

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32629.t1 MTR_3g107320 95.822 766 32 0 18 783 61 826 0.0 1541
MS.gene32629.t1 MTR_3g107360 71.891 772 200 9 22 783 58 822 0.0 1149
MS.gene32629.t1 MTR_4g010650 66.232 767 247 7 22 783 49 808 0.0 1058
MS.gene32629.t1 MTR_2g103730 67.143 770 236 8 22 783 49 809 0.0 1051
MS.gene32629.t1 MTR_7g075910 47.656 768 364 15 26 772 354 1104 0.0 703
MS.gene32629.t1 MTR_8g033080 47.341 771 367 16 26 772 284 1039 0.0 699
MS.gene32629.t1 MTR_8g088690 45.363 798 366 16 26 783 75 842 0.0 679
MS.gene32629.t1 MTR_3g114840 45.581 792 381 17 26 783 76 851 0.0 676
MS.gene32629.t1 MTR_5g011050 45.207 772 378 17 26 772 93 844 0.0 663
MS.gene32629.t1 MTR_5g023050 42.164 804 399 15 26 783 89 872 0.0 655
MS.gene32629.t1 MTR_5g011060 44.603 769 387 16 26 772 87 838 0.0 653
MS.gene32629.t1 MTR_2g100250 43.928 774 384 17 15 783 28 756 0.0 620
MS.gene32629.t1 MTR_3g114840 44.892 695 338 14 26 686 76 759 0.0 582
MS.gene32629.t1 MTR_8g016160 41.667 768 384 21 21 783 37 745 0.0 555
MS.gene32629.t1 MTR_8g033080 46.751 554 265 11 26 560 284 826 3.14e-162 491
MS.gene32629.t1 MTR_1g083620 31.727 249 133 11 468 706 477 698 8.03e-22 101
MS.gene32629.t1 MTR_1g083620 31.064 235 119 9 174 395 120 324 8.81e-18 88.6
MS.gene32629.t1 MTR_1g083620 31.727 249 133 11 468 706 737 958 1.09e-21 101
MS.gene32629.t1 MTR_1g083620 31.064 235 119 9 174 395 380 584 5.79e-18 89.4
MS.gene32629.t1 MTR_2g435560 32.836 201 103 6 468 663 647 820 1.15e-19 95.1
MS.gene32629.t1 MTR_2g435560 29.134 254 126 10 174 406 246 466 1.42e-16 85.1
MS.gene32629.t1 MTR_2g435560 32.836 201 103 6 468 663 782 955 1.33e-19 94.7
MS.gene32629.t1 MTR_2g435560 29.134 254 126 10 174 406 381 601 9.88e-17 85.5
MS.gene32629.t1 MTR_5g023040 50.000 68 30 1 292 359 806 869 1.11e-15 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32629.t1 AT3G15730 64.721 771 253 7 22 783 50 810 0.0 1048
MS.gene32629.t1 AT1G52570 63.896 770 261 9 22 783 50 810 0.0 1023
MS.gene32629.t1 AT1G52570 63.896 770 261 9 22 783 50 810 0.0 1023
MS.gene32629.t1 AT1G52570 63.896 770 261 9 22 783 50 810 0.0 1023
MS.gene32629.t1 AT5G25370 63.103 767 271 9 22 783 61 820 0.0 979
MS.gene32629.t1 AT5G25370 63.103 767 271 9 22 783 61 820 0.0 979
MS.gene32629.t1 AT5G25370 63.103 767 271 9 22 783 61 820 0.0 979
MS.gene32629.t1 AT5G25370 63.588 747 260 9 42 783 6 745 0.0 959
MS.gene32629.t1 AT4G11830 46.253 774 372 18 26 772 90 846 0.0 696
MS.gene32629.t1 AT4G11830 46.253 774 372 18 26 772 58 814 0.0 696
MS.gene32629.t1 AT2G42010 45.632 767 382 14 26 772 322 1073 0.0 686
MS.gene32629.t1 AT4G11840 45.560 777 374 16 26 772 99 856 0.0 683
MS.gene32629.t1 AT2G42010 44.823 792 377 16 26 772 322 1098 0.0 677
MS.gene32629.t1 AT4G00240 45.763 767 381 14 26 772 131 882 0.0 677
MS.gene32629.t1 AT4G00240 44.924 788 399 14 5 772 145 917 0.0 677
MS.gene32629.t1 AT4G00240 45.763 767 381 14 26 772 14 765 0.0 676
MS.gene32629.t1 AT4G11850 45.796 773 377 16 26 772 92 848 0.0 671
MS.gene32629.t1 AT4G11840 45.149 773 353 15 26 772 99 826 0.0 671
MS.gene32629.t1 AT4G35790 42.910 818 400 14 4 783 69 857 0.0 665
MS.gene32629.t1 AT4G35790 42.823 829 396 16 4 783 69 868 0.0 659
MS.gene32629.t1 AT1G55180 41.656 785 397 19 10 783 6 740 0.0 601
MS.gene32629.t1 AT1G55180 42.263 769 383 19 26 783 44 762 0.0 600
MS.gene32629.t1 AT4G35790 41.429 630 314 9 4 597 69 679 8.29e-167 498
MS.gene32629.t1 AT4G11830 45.699 558 274 11 26 567 90 634 1.88e-164 490
MS.gene32629.t1 AT4G11830 46.026 541 263 11 26 550 90 617 3.97e-160 479
MS.gene32629.t1 AT3G05630 28.099 726 352 31 100 728 304 956 4.03e-44 172
MS.gene32629.t1 AT3G16785 35.961 203 96 7 467 663 756 930 5.57e-22 102
MS.gene32629.t1 AT3G16785 31.250 224 102 8 189 395 389 577 2.25e-18 90.9
MS.gene32629.t1 AT3G16785 35.961 203 96 7 467 663 756 930 5.57e-22 102
MS.gene32629.t1 AT3G16785 31.250 224 102 8 189 395 389 577 2.25e-18 90.9
MS.gene32629.t1 AT3G16785 35.961 203 96 7 467 663 756 930 6.00e-22 102
MS.gene32629.t1 AT3G16785 31.250 224 102 8 189 395 389 577 2.77e-18 90.5
MS.gene32629.t1 AT3G16785 35.961 203 96 7 467 663 756 930 6.00e-22 102
MS.gene32629.t1 AT3G16785 31.250 224 102 8 189 395 389 577 2.77e-18 90.5
MS.gene32629.t1 AT3G16785 35.961 203 96 7 467 663 756 930 7.01e-22 102
MS.gene32629.t1 AT3G16785 31.250 224 102 8 189 395 389 577 2.12e-18 90.9
MS.gene32629.t1 AT3G16785 35.961 203 96 7 467 663 756 930 7.47e-22 102
MS.gene32629.t1 AT3G16785 31.250 224 102 8 189 395 389 577 2.98e-18 90.5

Find 154 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAAATCACCTGGGAAATT+TGG 0.100944 3.1:+84953880 None:intergenic
TTAATGCAATTCAAACTTTC+TGG 0.122895 3.1:+84952409 None:intergenic
TCCCTTACCTATCATCATTT+TGG 0.178826 3.1:+84952865 None:intergenic
TTGTATTTGAACATGGATTT+TGG 0.185371 3.1:+84954623 None:intergenic
GCTTGAACTGAAGCACTTTC+AGG 0.203277 3.1:+84953115 None:intergenic
GAAAGGTTTCATTCCATTTC+GGG 0.221154 3.1:+84954823 None:intergenic
CCCATTGGAGCGACTCTAAT+TGG 0.224022 3.1:-84954744 MS.gene32629:CDS
AGCAGTTATGGTTCCATTAT+TGG 0.224317 3.1:+84952282 None:intergenic
AATCCATATATTTGTCCTTT+TGG 0.234668 3.1:+84952493 None:intergenic
ATCGATGCTGGTGCTGCTTC+TGG 0.242139 3.1:-84953442 MS.gene32629:CDS
GTCTATTACTGGTGGCTATA+TGG 0.261291 3.1:+84952518 None:intergenic
CATCTTGGTAAAGAGTAATT+TGG 0.273836 3.1:+84954502 None:intergenic
TGAAAGGTTTCATTCCATTT+CGG 0.287963 3.1:+84954822 None:intergenic
TTAATGTTCTTATGCTTGTT+TGG 0.298166 3.1:-84954248 MS.gene32629:CDS
CCAACAGAAGCCGCTGAAAA+AGG 0.298342 3.1:-84953406 MS.gene32629:CDS
CCATTATTGGTTACTTGTAT+TGG 0.306443 3.1:+84952295 None:intergenic
CCAATACAAGTAACCAATAA+TGG 0.313741 3.1:-84952295 MS.gene32629:CDS
GATACTAAGGCTAAGATTCT+AGG 0.315033 3.1:-84952235 MS.gene32629:CDS
TGTCAACAATTATAGTCTTC+TGG 0.324805 3.1:+84954049 None:intergenic
AAGAACATTAACACCTTCAT+TGG 0.328996 3.1:+84954260 None:intergenic
ACATTCTTTAAACAAAATAA+TGG 0.329312 3.1:-84954528 MS.gene32629:CDS
GTTGTTCTTGTTGACTTGTT+TGG 0.332002 3.1:+84954315 None:intergenic
TGGAGGAAGGTACTCAGATT+TGG 0.345102 3.1:+84952210 None:intergenic
GGAACCATAACTGCTCTTCC+AGG 0.349450 3.1:-84952274 MS.gene32629:CDS
CCACCAAAAGGACAAATATA+TGG 0.350161 3.1:-84952496 MS.gene32629:CDS
CCCTTTATGACTTGTTCAAC+TGG 0.351702 3.1:+84954708 None:intergenic
GTTGGAAGAACTAGAATGAT+AGG 0.353330 3.1:-84954849 MS.gene32629:CDS
TAATGTTCTTATGCTTGTTT+GGG 0.358547 3.1:-84954247 MS.gene32629:CDS
ACTCCATCCAATGGAATATA+CGG 0.365105 3.1:+84954456 None:intergenic
GATATTAAAGTTGAGGATAT+TGG 0.365230 3.1:-84953247 MS.gene32629:CDS
TCCAGTTGAACAAGTCATAA+AGG 0.366172 3.1:-84954709 MS.gene32629:CDS
ATATAATCACTGTCAGGTTC+TGG 0.366661 3.1:+84952929 None:intergenic
CTTTAAGAAAGATGGCTTGA+TGG 0.371228 3.1:-84954202 MS.gene32629:CDS
CAGTTCAAGCAATATTAGAT+TGG 0.371630 3.1:-84953102 MS.gene32629:CDS
TTTAGTCCTTGTGACCAGTT+TGG 0.378654 3.1:+84954579 None:intergenic
GTTCCTGACTTTAAGAAAGA+TGG 0.382115 3.1:-84954210 MS.gene32629:CDS
CATGGCTAGGTGGTGAGAAT+TGG 0.390572 3.1:+84952190 None:intergenic
TAAAATGACAAGTAATCTCT+TGG 0.395875 3.1:+84953007 None:intergenic
TTACTGGTGGCTATATGGTT+TGG 0.403321 3.1:+84952523 None:intergenic
CAAGATGCACATGTTCTAGA+TGG 0.408428 3.1:-84954486 MS.gene32629:CDS
GATGATGAATACATAATCAT+TGG 0.412861 3.1:-84952616 MS.gene32629:CDS
TATGAGCACCTTGGAGATAT+TGG 0.417376 3.1:-84952454 MS.gene32629:CDS
GTTCATGCCAAAATGATGAT+AGG 0.420607 3.1:-84952872 MS.gene32629:intron
AGAATCTTAGCCTTAGTATC+AGG 0.421693 3.1:+84952238 None:intergenic
CAAGAACAACCATCACTCTT+GGG 0.423882 3.1:-84954302 MS.gene32629:CDS
CGGCTTCTGTTGGATCTTGA+GGG 0.427130 3.1:+84953416 None:intergenic
AAATCCTGGAAGAGCAGTTA+TGG 0.432056 3.1:+84952270 None:intergenic
GCACTTTCAGGTATACCTTC+TGG 0.435666 3.1:+84953127 None:intergenic
ATCTTCAGTGACAACTCCTT+TGG 0.436891 3.1:+84953208 None:intergenic
GCGGCTTCTGTTGGATCTTG+AGG 0.438003 3.1:+84953415 None:intergenic
AAGCCATCTTTCTTAAAGTC+AGG 0.443766 3.1:+84954207 None:intergenic
AGATTGGCAAAGAAGGACTA+TGG 0.445851 3.1:-84953086 MS.gene32629:CDS
CAATATTAGATTGGCAAAGA+AGG 0.446472 3.1:-84953093 MS.gene32629:CDS
GAATGATAGGTAGCCCGAAA+TGG 0.447072 3.1:-84954836 MS.gene32629:CDS
CCAATTAGAGTCGCTCCAAT+GGG 0.447711 3.1:+84954744 None:intergenic
GATATTCATTGTAAACTAGA+AGG 0.448111 3.1:-84953637 MS.gene32629:CDS
GTTCCGTATATTCCATTGGA+TGG 0.448817 3.1:-84954459 MS.gene32629:CDS
TTCTAGGTAGTTCATATGGT+TGG 0.454363 3.1:-84953279 MS.gene32629:CDS
CTTGTTTGGATCTCTAATCA+AGG 0.457534 3.1:+84954329 None:intergenic
GTGACAACTCCTTTGGTATG+AGG 0.458272 3.1:+84953215 None:intergenic
CTTTGAGTATATGTCCCAAT+TGG 0.459345 3.1:+84952363 None:intergenic
ACAAGAACAACCATCACTCT+TGG 0.459719 3.1:-84954303 MS.gene32629:CDS
CCAGTTGAACAAGTCATAAA+GGG 0.460625 3.1:-84954708 MS.gene32629:CDS
CACAACACATCCCATGCAAC+AGG 0.462297 3.1:+84953613 None:intergenic
CGAAACATGCTTGAAGGTAG+TGG 0.463688 3.1:+84953544 None:intergenic
AGAGACAGTGAGATTGCAAT+AGG 0.465168 3.1:-84952556 MS.gene32629:CDS
TGAGGAACTCCTTGAAATCC+TGG 0.466088 3.1:+84954552 None:intergenic
ATATCATGCCATGGCTCTCT+AGG 0.466709 3.1:+84953655 None:intergenic
TTCTGTTCCGTATATTCCAT+TGG 0.467036 3.1:-84954463 MS.gene32629:CDS
ATTGTTAGCAAGATTGAAGC+TGG 0.474341 3.1:-84953187 MS.gene32629:CDS
CTAAAGAGTCCAGGATTTCA+AGG 0.476603 3.1:-84954561 MS.gene32629:CDS
CATTGATCTTTGATTTATGT+TGG 0.476676 3.1:+84952588 None:intergenic
TCAGGAAAACATTCAAATCC+TGG 0.477356 3.1:+84952256 None:intergenic
GTTGAAGCCCTTCAAAGAAA+AGG 0.478206 3.1:-84953043 MS.gene32629:CDS
TCAGGTTCTGGTGCCTCTGT+AGG 0.480853 3.1:+84952941 None:intergenic
AACTGGTTGGTCTGTTTACA+CGG 0.480935 3.1:-84954358 MS.gene32629:CDS
CATCTAGAACATGTGCATCT+TGG 0.481308 3.1:+84954487 None:intergenic
ATGGATTTAGACGTGCACTA+TGG 0.481715 3.1:-84952477 MS.gene32629:CDS
TCCAATTAGAGTCGCTCCAA+TGG 0.488605 3.1:+84954743 None:intergenic
GATTTAGACAAAGCAAGAGT+TGG 0.492961 3.1:-84954867 MS.gene32629:CDS
GGCTAGGTGGTGAGAATTGG+AGG 0.496635 3.1:+84952193 None:intergenic
AAAATGACAAGTAATCTCTT+GGG 0.497438 3.1:+84953008 None:intergenic
TATTCACGAAACATGCTTGA+AGG 0.498456 3.1:+84953538 None:intergenic
GTATGTGCCGGGAAAATGTT+GGG 0.500103 3.1:-84954427 MS.gene32629:CDS
TTGTTTAGATCGATCGATGC+TGG 0.502376 3.1:-84953454 MS.gene32629:CDS
GATGGAAGAAGTATAGTTCA+AGG 0.503461 3.1:-84954102 MS.gene32629:CDS
GTGGGATTGATCTTTGTGAT+GGG 0.506802 3.1:-84953972 MS.gene32629:CDS
AGGGCAACATAGTGAATACA+TGG 0.511698 3.1:-84954689 MS.gene32629:CDS
GCTCTAATATAATCACTGTC+AGG 0.514466 3.1:+84952923 None:intergenic
TTTGACAGTGAATATAATGT+TGG 0.517344 3.1:+84954776 None:intergenic
TGGAGTAGAACGGTATGTGC+CGG 0.519752 3.1:-84954439 MS.gene32629:CDS
CAACATAAATCAAAGATCAA+TGG 0.522850 3.1:-84952587 MS.gene32629:CDS
AACTAGAAGGACCTGTTGCA+TGG 0.522952 3.1:-84953624 MS.gene32629:CDS
GGAGTAGAACGGTATGTGCC+GGG 0.525843 3.1:-84954438 MS.gene32629:CDS
GGTGGGATTGATCTTTGTGA+TGG 0.527896 3.1:-84953973 MS.gene32629:CDS
TTTCATCAACCAAATTTCCC+AGG 0.530381 3.1:-84953889 MS.gene32629:intron
GGTATACCTTCTGGCCACAT+TGG 0.533593 3.1:+84953136 None:intergenic
CGGCAAATCAAAACAACACA+TGG 0.534970 3.1:-84953486 MS.gene32629:CDS
CTTAAGAAGAAAGCCAATGA+AGG 0.539673 3.1:-84954273 MS.gene32629:CDS
TCTTACCCTCTCGGTTTCCA+AGG 0.540213 3.1:+84952981 None:intergenic
CAAAGATGGGAAAAGCAAGT+TGG 0.540379 3.1:-84953580 MS.gene32629:CDS
GATATACCTCTGGCTTGCAT+TGG 0.543798 3.1:+84955056 None:intergenic
ACTATACTTCTTCCATCACC+AGG 0.545798 3.1:+84954108 None:intergenic
CTTCCATCACCAGGGTTACG+TGG 0.548889 3.1:+84954117 None:intergenic
ACTAGAAGGACCTGTTGCAT+GGG 0.560087 3.1:-84953623 MS.gene32629:CDS
GTGGATCATCGTCCAATACA+AGG 0.562412 3.1:-84954651 MS.gene32629:CDS
AAGGGAACATGCACAAGCGT+GGG 0.570770 3.1:-84955124 None:intergenic
TTCATATGGTTGGAAATCAT+CGG 0.572489 3.1:-84953269 MS.gene32629:CDS
ACCAGTAATAGACCACCAAA+AGG 0.573701 3.1:-84952508 MS.gene32629:CDS
ATGGGTTAATATATTAGATG+TGG 0.574499 3.1:-84954670 MS.gene32629:CDS
GTCATTCCAATGTGGCCAGA+AGG 0.574690 3.1:-84953142 MS.gene32629:CDS
TACCGTTCTACTCCATCCAA+TGG 0.576822 3.1:+84954447 None:intergenic
TGCTTTGCACCTCATACCAA+AGG 0.582854 3.1:-84953224 MS.gene32629:CDS
TGACAAGTAATCTCTTGGGT+TGG 0.586202 3.1:+84953012 None:intergenic
GTCAAACAAGATAACCCCAT+TGG 0.587028 3.1:-84954759 MS.gene32629:CDS
ATCATCGGATATTAAAGTTG+AGG 0.587336 3.1:-84953254 MS.gene32629:CDS
AAGAAGCTCCCCAAGAGTGA+TGG 0.594868 3.1:+84954293 None:intergenic
TCACAAGGACTAAAGAGTCC+AGG 0.595640 3.1:-84954570 MS.gene32629:CDS
TCGTCGAATAGCGTTTATGT+AGG 0.595975 3.1:+84953336 None:intergenic
CAAGGGAACATGCACAAGCG+TGG 0.596680 3.1:-84955125 None:intergenic
TGAAAACAAAGGATGTTCCA+TGG 0.602384 3.1:+84953939 None:intergenic
TATTGCCTTGGAAACCGAGA+GGG 0.604275 3.1:-84952986 MS.gene32629:CDS
TGCCCACGTAACCCTGGTGA+TGG 0.604924 3.1:-84954120 MS.gene32629:CDS
GGTATGTGCCGGGAAAATGT+TGG 0.606197 3.1:-84954428 MS.gene32629:CDS
TTTCTCTCCACATGGCTAGG+TGG 0.613613 3.1:+84952180 None:intergenic
GTGAGAATTGTATTTGAACA+TGG 0.616949 3.1:+84954616 None:intergenic
TTACAATGAATATCATGCCA+TGG 0.618761 3.1:+84953646 None:intergenic
ATGTGCAGAGTAAATGTGAA+AGG 0.624116 3.1:+84954806 None:intergenic
ATAAATCAAAGATCAATGGA+TGG 0.626562 3.1:-84952583 MS.gene32629:CDS
TTCCATCACCAGGGTTACGT+GGG 0.629779 3.1:+84954118 None:intergenic
AAGAACAACCATCACTCTTG+GGG 0.634263 3.1:-84954301 MS.gene32629:CDS
GTATTCAAAGTTGAAAACAA+AGG 0.635550 3.1:+84953928 None:intergenic
GCACTATGGTATGAGCACCT+TGG 0.638088 3.1:-84952463 MS.gene32629:CDS
AATGATCCAAACTGGTCACA+AGG 0.638447 3.1:-84954585 MS.gene32629:CDS
CAATTGGGACATATACTCAA+AGG 0.640794 3.1:-84952362 MS.gene32629:CDS
AGGTGGTGAGAATTGGAGGA+AGG 0.643329 3.1:+84952197 None:intergenic
GAATGAATATACTCCTACAG+AGG 0.643986 3.1:-84952954 MS.gene32629:CDS
TTGTATCACCAATATCTCCA+AGG 0.650254 3.1:+84952446 None:intergenic
CTTGTATTGGATAATGCATG+AGG 0.661800 3.1:+84952308 None:intergenic
TCGTGTATCGAATGTTGCCA+CGG 0.661868 3.1:-84953506 MS.gene32629:CDS
TTCCATTGGATGGAGTAGAA+CGG 0.671871 3.1:-84954449 MS.gene32629:CDS
GGTGCTTCTATTAACAAAGG+TGG 0.672280 3.1:-84953679 MS.gene32629:CDS
ACAGGTGCTTCTATTAACAA+AGG 0.672622 3.1:-84953682 MS.gene32629:intron
AAGTTGCTAGTTCTGCACAA+TGG 0.673752 3.1:-84954023 MS.gene32629:CDS
AGGGAACATGCACAAGCGTG+GGG 0.679420 3.1:-84955123 None:intergenic
TGATGGGAGATATGATACCA+TGG 0.695563 3.1:-84953956 MS.gene32629:CDS
CTATACTTCTTCCATCACCA+GGG 0.698859 3.1:+84954109 None:intergenic
AAGGTGGTCCTAGAGAGCCA+TGG 0.705923 3.1:-84953663 MS.gene32629:CDS
GGGCAACATAGTGAATACAT+GGG 0.707757 3.1:-84954688 MS.gene32629:CDS
TCAATGCCAATGCAAGCCAG+AGG 0.708442 3.1:-84955062 MS.gene32629:intron
CAATTAGAGTCGCTCCAATG+GGG 0.713373 3.1:+84954745 None:intergenic
TTATTGCCTTGGAAACCGAG+AGG 0.718876 3.1:-84952987 MS.gene32629:CDS
TGTACATTGTCATTCCAATG+TGG 0.747438 3.1:-84953150 MS.gene32629:CDS
GATCATCGTCCAATACAAGG+CGG 0.779275 3.1:-84954648 MS.gene32629:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATAAAATATTCCAAC+AGG - chr3.1:84953611-84953630 MS.gene32629:CDS 15.0%
!! AATAAATGTAAAATAGAAAC+AGG + chr3.1:84954488-84954507 None:intergenic 15.0%
!! ACATTCTTTAAACAAAATAA+TGG - chr3.1:84952783-84952802 MS.gene32629:intron 15.0%
!!! TAATAAATTTTCTTTTGCAA+AGG + chr3.1:84954629-84954648 None:intergenic 15.0%
!! AAAAACATTTCACAGATTAT+TGG - chr3.1:84952399-84952418 MS.gene32629:CDS 20.0%
!! AAAACATTTCACAGATTATT+GGG - chr3.1:84952400-84952419 MS.gene32629:CDS 20.0%
!!! ATTGAAAATCAGTATTTTCT+AGG - chr3.1:84954016-84954035 MS.gene32629:CDS 20.0%
! AAAATGACAAGTAATCTCTT+GGG + chr3.1:84954306-84954325 None:intergenic 25.0%
! AGGACTTAATTATGAAATGT+TGG - chr3.1:84953568-84953587 MS.gene32629:CDS 25.0%
! ATAAATCAAAGATCAATGGA+TGG - chr3.1:84954728-84954747 MS.gene32629:CDS 25.0%
! ATGTTAAAAATGATCCAAAC+TGG - chr3.1:84952718-84952737 MS.gene32629:intron 25.0%
! CAACATAAATCAAAGATCAA+TGG - chr3.1:84954724-84954743 MS.gene32629:CDS 25.0%
! GAAACAGGTAATATATATGT+TGG + chr3.1:84954473-84954492 None:intergenic 25.0%
! GATATTAAAGTTGAGGATAT+TGG - chr3.1:84954064-84954083 MS.gene32629:CDS 25.0%
! GATATTCATTGTAAACTAGA+AGG - chr3.1:84953674-84953693 MS.gene32629:CDS 25.0%
! GATGATGAATACATAATCAT+TGG - chr3.1:84954695-84954714 MS.gene32629:CDS 25.0%
! GTATTCAAAGTTGAAAACAA+AGG + chr3.1:84953386-84953405 None:intergenic 25.0%
! TAAAATGACAAGTAATCTCT+TGG + chr3.1:84954307-84954326 None:intergenic 25.0%
! TAATGTTCTTATGCTTGTTT+GGG - chr3.1:84953064-84953083 MS.gene32629:CDS 25.0%
! TACAGATTATATAGTCAACA+AGG + chr3.1:84952300-84952319 None:intergenic 25.0%
! TAGGTGTTAGAATGTATAAA+GGG + chr3.1:84952370-84952389 None:intergenic 25.0%
! TTAATGCAATTCAAACTTTC+TGG + chr3.1:84954905-84954924 None:intergenic 25.0%
! TTAATGTTCTTATGCTTGTT+TGG - chr3.1:84953063-84953082 MS.gene32629:CDS 25.0%
! TTAGGTGTTAGAATGTATAA+AGG + chr3.1:84952371-84952390 None:intergenic 25.0%
! TTTGACAGTGAATATAATGT+TGG + chr3.1:84952538-84952557 None:intergenic 25.0%
!! AATCCATATATTTGTCCTTT+TGG + chr3.1:84954821-84954840 None:intergenic 25.0%
!! ATGGGTTAATATATTAGATG+TGG - chr3.1:84952641-84952660 MS.gene32629:intron 25.0%
!! CATTGATCTTTGATTTATGT+TGG + chr3.1:84954726-84954745 None:intergenic 25.0%
!! TATTTTCTAGGTAGTTCATA+TGG - chr3.1:84954028-84954047 MS.gene32629:CDS 25.0%
!! TTGTATTTGAACATGGATTT+TGG + chr3.1:84952691-84952710 None:intergenic 25.0%
!!! AAATGTTTTTACATGTCGTT+AGG + chr3.1:84952389-84952408 None:intergenic 25.0%
!!! AAGCATTTTATTTGCATAAC+TGG - chr3.1:84952936-84952955 MS.gene32629:CDS 25.0%
!!! ATTGGAAAGTGTCAATTTAA+TGG + chr3.1:84954591-84954610 None:intergenic 25.0%
!!! ATTTTATTTGCATAACTGGT+TGG - chr3.1:84952940-84952959 MS.gene32629:CDS 25.0%
!!! TTTTGTTTAAAGAATGTGTG+AGG + chr3.1:84952780-84952799 None:intergenic 25.0%
AAGAACATTAACACCTTCAT+TGG + chr3.1:84953054-84953073 None:intergenic 30.0%
AATATGTGAAGATATACCTC+TGG + chr3.1:84952268-84952287 None:intergenic 30.0%
AGGTGTATGTGCTAATTAAT+TGG + chr3.1:84954609-84954628 None:intergenic 30.0%
ATCATCGGATATTAAAGTTG+AGG - chr3.1:84954057-84954076 MS.gene32629:CDS 30.0%
ATTTCACAGATTATTGGGAT+GGG - chr3.1:84952405-84952424 MS.gene32629:CDS 30.0%
CAATATTAGATTGGCAAAGA+AGG - chr3.1:84954218-84954237 MS.gene32629:CDS 30.0%
CAGTTCAAGCAATATTAGAT+TGG - chr3.1:84954209-84954228 MS.gene32629:CDS 30.0%
CATCTTGGTAAAGAGTAATT+TGG + chr3.1:84952812-84952831 None:intergenic 30.0%
CCAATACAAGTAACCAATAA+TGG - chr3.1:84955016-84955035 MS.gene32629:intron 30.0%
GCATGCATATTTACAATCTT+AGG - chr3.1:84953548-84953567 MS.gene32629:CDS 30.0%
GTGAGAATTGTATTTGAACA+TGG + chr3.1:84952698-84952717 None:intergenic 30.0%
TGAAAGGTTTCATTCCATTT+CGG + chr3.1:84952492-84952511 None:intergenic 30.0%
TGTCAACAATTATAGTCTTC+TGG + chr3.1:84953265-84953284 None:intergenic 30.0%
TTACAATGAATATCATGCCA+TGG + chr3.1:84953668-84953687 None:intergenic 30.0%
TTCATATGGTTGGAAATCAT+CGG - chr3.1:84954042-84954061 MS.gene32629:CDS 30.0%
! CCATTATTGGTTACTTGTAT+TGG + chr3.1:84955019-84955038 None:intergenic 30.0%
! TCTGATTCCTTTTCTTTGAA+GGG + chr3.1:84954278-84954297 None:intergenic 30.0%
! TGAATGTTTTCCTGATACTA+AGG - chr3.1:84955063-84955082 MS.gene32629:CDS 30.0%
!! AGAACAATCACAAGTTTTGT+TGG - chr3.1:84953317-84953336 MS.gene32629:CDS 30.0%
!!! TACTTGTCATTTTATTGCCT+TGG - chr3.1:84954313-84954332 MS.gene32629:CDS 30.0%
AAACTAGTTCCAAAATCACC+TGG + chr3.1:84953443-84953462 None:intergenic 35.0%
AACGCAGTTCAAATATCTTC+GGG + chr3.1:84954541-84954560 None:intergenic 35.0%
AACTAGTTCCAAAATCACCT+GGG + chr3.1:84953442-84953461 None:intergenic 35.0%
AAGCCATCTTTCTTAAAGTC+AGG + chr3.1:84953107-84953126 None:intergenic 35.0%
ACAGGTGCTTCTATTAACAA+AGG - chr3.1:84953629-84953648 MS.gene32629:CDS 35.0%
ACTCCATCCAATGGAATATA+CGG + chr3.1:84952858-84952877 None:intergenic 35.0%
AGCAGTTATGGTTCCATTAT+TGG + chr3.1:84955032-84955051 None:intergenic 35.0%
ATATAATCACTGTCAGGTTC+TGG + chr3.1:84954385-84954404 None:intergenic 35.0%
ATGTGCAGAGTAAATGTGAA+AGG + chr3.1:84952508-84952527 None:intergenic 35.0%
ATTGTTAGCAAGATTGAAGC+TGG - chr3.1:84954124-84954143 MS.gene32629:CDS 35.0%
CAATTGGGACATATACTCAA+AGG - chr3.1:84954949-84954968 MS.gene32629:intron 35.0%
CATTTCACAGATTATTGGGA+TGG - chr3.1:84952404-84952423 MS.gene32629:CDS 35.0%
CCACCAAAAGGACAAATATA+TGG - chr3.1:84954815-84954834 MS.gene32629:CDS 35.0%
CCAGTTGAACAAGTCATAAA+GGG - chr3.1:84952603-84952622 MS.gene32629:CDS 35.0%
CTTAAGAAGAAAGCCAATGA+AGG - chr3.1:84953038-84953057 MS.gene32629:CDS 35.0%
CTTGTATTGGATAATGCATG+AGG + chr3.1:84955006-84955025 None:intergenic 35.0%
CTTGTTTGGATCTCTAATCA+AGG + chr3.1:84952985-84953004 None:intergenic 35.0%
CTTTGAGTATATGTCCCAAT+TGG + chr3.1:84954951-84954970 None:intergenic 35.0%
GAAAGGTTTCATTCCATTTC+GGG + chr3.1:84952491-84952510 None:intergenic 35.0%
GAACGCAGTTCAAATATCTT+CGG + chr3.1:84954542-84954561 None:intergenic 35.0%
GAATGAATATACTCCTACAG+AGG - chr3.1:84954357-84954376 MS.gene32629:CDS 35.0%
GATACTAAGGCTAAGATTCT+AGG - chr3.1:84955076-84955095 MS.gene32629:CDS 35.0%
GATTTAGACAAAGCAAGAGT+TGG - chr3.1:84952444-84952463 MS.gene32629:CDS 35.0%
GCCAAAATGATGATAGGTAA+GGG - chr3.1:84954445-84954464 MS.gene32629:CDS 35.0%
GCTCTAATATAATCACTGTC+AGG + chr3.1:84954391-84954410 None:intergenic 35.0%
GTTCATGCCAAAATGATGAT+AGG - chr3.1:84954439-84954458 MS.gene32629:CDS 35.0%
GTTGGAAGAACTAGAATGAT+AGG - chr3.1:84952462-84952481 MS.gene32629:CDS 35.0%
TATTCACGAAACATGCTTGA+AGG + chr3.1:84953776-84953795 None:intergenic 35.0%
TATTTGAACTGCGTTCTTTG+AGG - chr3.1:84954546-84954565 MS.gene32629:CDS 35.0%
TCAGGAAAACATTCAAATCC+TGG + chr3.1:84955058-84955077 None:intergenic 35.0%
TCCAGTTGAACAAGTCATAA+AGG - chr3.1:84952602-84952621 MS.gene32629:CDS 35.0%
TGAAAACAAAGGATGTTCCA+TGG + chr3.1:84953375-84953394 None:intergenic 35.0%
TGCCAAAATGATGATAGGTA+AGG - chr3.1:84954444-84954463 MS.gene32629:CDS 35.0%
TGTACATTGTCATTCCAATG+TGG - chr3.1:84954161-84954180 MS.gene32629:CDS 35.0%
TTCTAGGTAGTTCATATGGT+TGG - chr3.1:84954032-84954051 MS.gene32629:CDS 35.0%
TTCTGTTCCGTATATTCCAT+TGG - chr3.1:84952848-84952867 MS.gene32629:intron 35.0%
TTGTATCACCAATATCTCCA+AGG + chr3.1:84954868-84954887 None:intergenic 35.0%
TTTCATCAACCAAATTTCCC+AGG - chr3.1:84953422-84953441 MS.gene32629:CDS 35.0%
! CATTCATTTTCTTACCCTCT+CGG + chr3.1:84954342-84954361 None:intergenic 35.0%
! CCATATATTTGTCCTTTTGG+TGG + chr3.1:84954818-84954837 None:intergenic 35.0%
! CTCTGATTCCTTTTCTTTGA+AGG + chr3.1:84954279-84954298 None:intergenic 35.0%
! CTTTAAGAAAGATGGCTTGA+TGG - chr3.1:84953109-84953128 MS.gene32629:CDS 35.0%
! GATGGAAGAAGTATAGTTCA+AGG - chr3.1:84953209-84953228 MS.gene32629:CDS 35.0%
! GTGCAATTTTGAGCAAAGAT+GGG - chr3.1:84953718-84953737 MS.gene32629:intron 35.0%
! GTTCCTGACTTTAAGAAAGA+TGG - chr3.1:84953101-84953120 MS.gene32629:CDS 35.0%
! TCCCTTACCTATCATCATTT+TGG + chr3.1:84954449-84954468 None:intergenic 35.0%
! TGTGCAATTTTGAGCAAAGA+TGG - chr3.1:84953717-84953736 MS.gene32629:intron 35.0%
!! AGAATCTTAGCCTTAGTATC+AGG + chr3.1:84955076-84955095 None:intergenic 35.0%
!! GTTGTTCTTGTTGACTTGTT+TGG + chr3.1:84952999-84953018 None:intergenic 35.0%
!! TTGTTAATAGAAGCACCTGT+TGG + chr3.1:84953629-84953648 None:intergenic 35.0%
!!! ACAATCACAAGTTTTGTTGG+TGG - chr3.1:84953320-84953339 MS.gene32629:CDS 35.0%
!!! AGTAACAAGACCTTTTTCAG+CGG + chr3.1:84953918-84953937 None:intergenic 35.0%
!!! CAATCACAAGTTTTGTTGGT+GGG - chr3.1:84953321-84953340 MS.gene32629:CDS 35.0%
AAATCCTGGAAGAGCAGTTA+TGG + chr3.1:84955044-84955063 None:intergenic 40.0%
AAGAACAACCATCACTCTTG+GGG - chr3.1:84953010-84953029 MS.gene32629:CDS 40.0%
AATGATCCAAACTGGTCACA+AGG - chr3.1:84952726-84952745 MS.gene32629:intron 40.0%
ACAAGAACAACCATCACTCT+TGG - chr3.1:84953008-84953027 MS.gene32629:CDS 40.0%
ACCAGTAATAGACCACCAAA+AGG - chr3.1:84954803-84954822 MS.gene32629:CDS 40.0%
ACTATACTTCTTCCATCACC+AGG + chr3.1:84953206-84953225 None:intergenic 40.0%
AGAGACAGTGAGATTGCAAT+AGG - chr3.1:84954755-84954774 MS.gene32629:CDS 40.0%
AGATTGGCAAAGAAGGACTA+TGG - chr3.1:84954225-84954244 MS.gene32629:CDS 40.0%
AGGGCAACATAGTGAATACA+TGG - chr3.1:84952622-84952641 MS.gene32629:intron 40.0%
ATCTTCAGTGACAACTCCTT+TGG + chr3.1:84954106-84954125 None:intergenic 40.0%
ATGGATTTAGACGTGCACTA+TGG - chr3.1:84954834-84954853 MS.gene32629:CDS 40.0%
CAAAGATGGGAAAAGCAAGT+TGG - chr3.1:84953731-84953750 MS.gene32629:intron 40.0%
CAAGAACAACCATCACTCTT+GGG - chr3.1:84953009-84953028 MS.gene32629:CDS 40.0%
CCAAAATCACCTGGGAAATT+TGG + chr3.1:84953434-84953453 None:intergenic 40.0%
CGGCAAATCAAAACAACACA+TGG - chr3.1:84953825-84953844 MS.gene32629:intron 40.0%
CTAAAGAGTCCAGGATTTCA+AGG - chr3.1:84952750-84952769 MS.gene32629:intron 40.0%
CTATACTTCTTCCATCACCA+GGG + chr3.1:84953205-84953224 None:intergenic 40.0%
GGGCAACATAGTGAATACAT+GGG - chr3.1:84952623-84952642 MS.gene32629:intron 40.0%
GGTGCTTCTATTAACAAAGG+TGG - chr3.1:84953632-84953651 MS.gene32629:CDS 40.0%
GTCAAACAAGATAACCCCAT+TGG - chr3.1:84952552-84952571 MS.gene32629:CDS 40.0%
GTCTATTACTGGTGGCTATA+TGG + chr3.1:84954796-84954815 None:intergenic 40.0%
GTGGGATTGATCTTTGTGAT+GGG - chr3.1:84953339-84953358 MS.gene32629:CDS 40.0%
GTTCCGTATATTCCATTGGA+TGG - chr3.1:84952852-84952871 MS.gene32629:intron 40.0%
GTTGAAGCCCTTCAAAGAAA+AGG - chr3.1:84954268-84954287 MS.gene32629:CDS 40.0%
TATGAGCACCTTGGAGATAT+TGG - chr3.1:84954857-84954876 MS.gene32629:CDS 40.0%
TCGTCGAATAGCGTTTATGT+AGG + chr3.1:84953978-84953997 None:intergenic 40.0%
TGACAAGTAATCTCTTGGGT+TGG + chr3.1:84954302-84954321 None:intergenic 40.0%
TGATGGGAGATATGATACCA+TGG - chr3.1:84953355-84953374 MS.gene32629:CDS 40.0%
TTACTGGTGGCTATATGGTT+TGG + chr3.1:84954791-84954810 None:intergenic 40.0%
TTCCATTGGATGGAGTAGAA+CGG - chr3.1:84952862-84952881 MS.gene32629:intron 40.0%
TTGTTTAGATCGATCGATGC+TGG - chr3.1:84953857-84953876 MS.gene32629:intron 40.0%
TTTAGTCCTTGTGACCAGTT+TGG + chr3.1:84952735-84952754 None:intergenic 40.0%
! ATCGTTTTGCTGAGACCAAT+TGG - chr3.1:84954933-84954952 MS.gene32629:intron 40.0%
! CAAGATGCACATGTTCTAGA+TGG - chr3.1:84952825-84952844 MS.gene32629:intron 40.0%
! CATCTAGAACATGTGCATCT+TGG + chr3.1:84952827-84952846 None:intergenic 40.0%
! CCAAATTTCCCAGGTGATTT+TGG - chr3.1:84953431-84953450 MS.gene32629:CDS 40.0%
! GTATCTTCCCAACATTTTCC+CGG + chr3.1:84952894-84952913 None:intergenic 40.0%
! TCGTTTTGCTGAGACCAATT+GGG - chr3.1:84954934-84954953 MS.gene32629:intron 40.0%
!! AACTGGTTGGTCTGTTTACA+CGG - chr3.1:84952953-84952972 MS.gene32629:CDS 40.0%
!! AAGTTGCTAGTTCTGCACAA+TGG - chr3.1:84953288-84953307 MS.gene32629:CDS 40.0%
!! CCCTTTATGACTTGTTCAAC+TGG + chr3.1:84952606-84952625 None:intergenic 40.0%
!! GCTGAAAAAGGTCTTGTTAC+TGG - chr3.1:84953917-84953936 MS.gene32629:CDS 40.0%
!! TCCTTTTGGTGGTCTATTAC+TGG + chr3.1:84954807-84954826 None:intergenic 40.0%
!! TTTTGGTGGTCTATTACTGG+TGG + chr3.1:84954804-84954823 None:intergenic 40.0%
!!! ATTTTGGAACCGCCTTGTAT+TGG + chr3.1:84952675-84952694 None:intergenic 40.0%
!!! TGTGTTGTTTTGATTTGCCG+TGG + chr3.1:84953825-84953844 None:intergenic 40.0%
AACTAGAAGGACCTGTTGCA+TGG - chr3.1:84953687-84953706 MS.gene32629:intron 45.0%
ACTAGAAGGACCTGTTGCAT+GGG - chr3.1:84953688-84953707 MS.gene32629:intron 45.0%
ATATCATGCCATGGCTCTCT+AGG + chr3.1:84953659-84953678 None:intergenic 45.0%
CAATTAGAGTCGCTCCAATG+GGG + chr3.1:84952569-84952588 None:intergenic 45.0%
CCAATTAGAGTCGCTCCAAT+GGG + chr3.1:84952570-84952589 None:intergenic 45.0%
CGAAACATGCTTGAAGGTAG+TGG + chr3.1:84953770-84953789 None:intergenic 45.0%
GAATGATAGGTAGCCCGAAA+TGG - chr3.1:84952475-84952494 MS.gene32629:CDS 45.0%
GATCATCGTCCAATACAAGG+CGG - chr3.1:84952663-84952682 MS.gene32629:intron 45.0%
GGTGGGATTGATCTTTGTGA+TGG - chr3.1:84953338-84953357 MS.gene32629:CDS 45.0%
GTATGTGCCGGGAAAATGTT+GGG - chr3.1:84952884-84952903 MS.gene32629:CDS 45.0%
GTGACAACTCCTTTGGTATG+AGG + chr3.1:84954099-84954118 None:intergenic 45.0%
GTGGATCATCGTCCAATACA+AGG - chr3.1:84952660-84952679 MS.gene32629:intron 45.0%
TACCGTTCTACTCCATCCAA+TGG + chr3.1:84952867-84952886 None:intergenic 45.0%
TATTGCCTTGGAAACCGAGA+GGG - chr3.1:84954325-84954344 MS.gene32629:CDS 45.0%
TCACAAGGACTAAAGAGTCC+AGG - chr3.1:84952741-84952760 MS.gene32629:intron 45.0%
TCCAATTAGAGTCGCTCCAA+TGG + chr3.1:84952571-84952590 None:intergenic 45.0%
TCGTGTATCGAATGTTGCCA+CGG - chr3.1:84953805-84953824 MS.gene32629:intron 45.0%
TGAGGAACTCCTTGAAATCC+TGG + chr3.1:84952762-84952781 None:intergenic 45.0%
TGCTTTGCACCTCATACCAA+AGG - chr3.1:84954087-84954106 MS.gene32629:CDS 45.0%
TTATTGCCTTGGAAACCGAG+AGG - chr3.1:84954324-84954343 MS.gene32629:CDS 45.0%
! GATATACCTCTGGCTTGCAT+TGG + chr3.1:84952258-84952277 None:intergenic 45.0%
! GCACTTTCAGGTATACCTTC+TGG + chr3.1:84954187-84954206 None:intergenic 45.0%
! GCTTGAACTGAAGCACTTTC+AGG + chr3.1:84954199-84954218 None:intergenic 45.0%
!! TGGAGGAAGGTACTCAGATT+TGG + chr3.1:84955104-84955123 None:intergenic 45.0%
AAGAAGCTCCCCAAGAGTGA+TGG + chr3.1:84953021-84953040 None:intergenic 50.0%
AGGTGGTGAGAATTGGAGGA+AGG + chr3.1:84955117-84955136 None:intergenic 50.0%
CACAACACATCCCATGCAAC+AGG + chr3.1:84953701-84953720 None:intergenic 50.0%
CCAACAGAAGCCGCTGAAAA+AGG - chr3.1:84953905-84953924 MS.gene32629:CDS 50.0%
CCCATTGGAGCGACTCTAAT+TGG - chr3.1:84952567-84952586 MS.gene32629:CDS 50.0%
CGGCTTCTGTTGGATCTTGA+GGG + chr3.1:84953898-84953917 None:intergenic 50.0%
GCACTATGGTATGAGCACCT+TGG - chr3.1:84954848-84954867 MS.gene32629:CDS 50.0%
GGAACCATAACTGCTCTTCC+AGG - chr3.1:84955037-84955056 MS.gene32629:intron 50.0%
GGTATACCTTCTGGCCACAT+TGG + chr3.1:84954178-84954197 None:intergenic 50.0%
GGTATGTGCCGGGAAAATGT+TGG - chr3.1:84952883-84952902 MS.gene32629:CDS 50.0%
GTCATTCCAATGTGGCCAGA+AGG - chr3.1:84954169-84954188 MS.gene32629:CDS 50.0%
TCAATGCCAATGCAAGCCAG+AGG - chr3.1:84952249-84952268 MS.gene32629:CDS 50.0%
TCTTACCCTCTCGGTTTCCA+AGG + chr3.1:84954333-84954352 None:intergenic 50.0%
TGGAGTAGAACGGTATGTGC+CGG - chr3.1:84952872-84952891 MS.gene32629:intron 50.0%
TTCCATCACCAGGGTTACGT+GGG + chr3.1:84953196-84953215 None:intergenic 50.0%
!!! CCTTTTTCAGCGGCTTCTGT+TGG + chr3.1:84953908-84953927 None:intergenic 50.0%
AAGGTGGTCCTAGAGAGCCA+TGG - chr3.1:84953648-84953667 MS.gene32629:CDS 55.0%
CTTCCATCACCAGGGTTACG+TGG + chr3.1:84953197-84953216 None:intergenic 55.0%
GCGGCTTCTGTTGGATCTTG+AGG + chr3.1:84953899-84953918 None:intergenic 55.0%
GGAGTAGAACGGTATGTGCC+GGG - chr3.1:84952873-84952892 MS.gene32629:CDS 55.0%
! GTTTTGTGCCCACGTAACCC+TGG - chr3.1:84953185-84953204 MS.gene32629:CDS 55.0%
! TCAGGTTCTGGTGCCTCTGT+AGG + chr3.1:84954373-84954392 None:intergenic 55.0%
!! ATCGATGCTGGTGCTGCTTC+TGG - chr3.1:84953869-84953888 MS.gene32629:intron 55.0%
TGCCCACGTAACCCTGGTGA+TGG - chr3.1:84953191-84953210 MS.gene32629:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 84952195 84955138 84952195 ID=MS.gene32629
chr3.1 mRNA 84952195 84955138 84952195 ID=MS.gene32629.t1;Parent=MS.gene32629
chr3.1 exon 84955063 84955138 84955063 ID=MS.gene32629.t1.exon1;Parent=MS.gene32629.t1
chr3.1 CDS 84955063 84955138 84955063 ID=cds.MS.gene32629.t1;Parent=MS.gene32629.t1
chr3.1 exon 84953890 84954891 84953890 ID=MS.gene32629.t1.exon2;Parent=MS.gene32629.t1
chr3.1 CDS 84953890 84954891 84953890 ID=cds.MS.gene32629.t1;Parent=MS.gene32629.t1
chr3.1 exon 84952873 84953700 84952873 ID=MS.gene32629.t1.exon3;Parent=MS.gene32629.t1
chr3.1 CDS 84952873 84953700 84952873 ID=cds.MS.gene32629.t1;Parent=MS.gene32629.t1
chr3.1 exon 84952195 84952640 84952195 ID=MS.gene32629.t1.exon4;Parent=MS.gene32629.t1
chr3.1 CDS 84952195 84952640 84952195 ID=cds.MS.gene32629.t1;Parent=MS.gene32629.t1
Gene Sequence

>MS.gene32629

ATGCACAAGCGTGGGGAAGAAAATTCTGTCACAAGTCAAGAGTTGTTTTCTATGTCAATGCCAATGCAAGCCAGAGGTATATCTTCACATATTAATTTATTTCCTTGTTGACTATATAATCTGTAATGTAATTATGTAACATACTTCATTATTTTTCTAATCACATAAAGTTCCCTTTATACATTCTAACACCTAACGACATGTAAAAACATTTCACAGATTATTGGGATGGGTCTATATGCAACAGTTGATTTAGACAAAGCAAGAGTTGGAAGAACTAGAATGATAGGTAGCCCGAAATGGAATGAAACCTTTCACATTTACTCTGCACATTCAATCTCCAACATTATATTCACTGTCAAACAAGATAACCCCATTGGAGCGACTCTAATTGGAAGAGCTTATGTTCCAGTTGAACAAGTCATAAAGGGCAACATAGTGAATACATGGGTTAATATATTAGATGTGGATCATCGTCCAATACAAGGCGGTTCCAAAATCCATGTTCAAATACAATTCTCACATGTTAAAAATGATCCAAACTGGTCACAAGGACTAAAGAGTCCAGGATTTCAAGGAGTTCCTCACACATTCTTTAAACAAAATAATGGTTGCCAAATTACTCTTTACCAAGATGCACATGTTCTAGATGGTTCTGTTCCGTATATTCCATTGGATGGAGTAGAACGGTATGTGCCGGGAAAATGTTGGGAAGATACTTACAATGCAATTAATGATGCTAAGCATTTTATTTGCATAACTGGTTGGTCTGTTTACACGGAAATAACCTTGATTAGAGATCCAAACAAGTCAACAAGAACAACCATCACTCTTGGGGAGCTTCTTAAGAAGAAAGCCAATGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGTTCCTGACTTTAAGAAAGATGGCTTGATGGCAACTCATGATCAAGAAATAGCAGAGTATTTTAGAAACACAAATGTGCATTGTGTTTTGTGCCCACGTAACCCTGGTGATGGAAGAAGTATAGTTCAAGGTTTTGAAATTTCAACTATGTTTACTCATCACCAGAAGACTATAATTGTTGACAGCAAAGTTGCTAGTTCTGCACAATGGAAGAAGAGAACAATCACAAGTTTTGTTGGTGGGATTGATCTTTGTGATGGGAGATATGATACCATGGAACATCCTTTGTTTTCAACTTTGAATACAATTCATCATGATGATTTTCATCAACCAAATTTCCCAGGTGATTTTGGAACTAGTTTTAAATTAATCACTTAAAAGACATGTTTGATACATAGATATAATATTACAATCATATATTAGTGTAGAAGTCAAATAAACATATGAGCATGCATATTTACAATCTTAGGACTTAATTATGAAATGTTGGTTTATCAAATATAATTAAATAAAATATAAAATATTCCAACAGGTGCTTCTATTAACAAAGGTGGTCCTAGAGAGCCATGGCATGATATTCATTGTAAACTAGAAGGACCTGTTGCATGGGATGTGTTGTGCAATTTTGAGCAAAGATGGGAAAAGCAAGTTGGAAAGCAATTAATTCCACTACCTTCAAGCATGTTTCGTGAATATGATATTGCTCGTGTATCGAATGTTGCCACGGCAAATCAAAACAACACATGGAATGTTCAATTGTTTAGATCGATCGATGCTGGTGCTGCTTCTGGCTTCCCTCAAGATCCAACAGAAGCCGCTGAAAAAGGTCTTGTTACTGGAAAAGATAACATCATTGATAGAAGCATTCAAGATGCCTACATAAACGCTATTCGACGAGCTAAGAACTTCGTCTACATTGAAAATCAGTATTTTCTAGGTAGTTCATATGGTTGGAAATCATCGGATATTAAAGTTGAGGATATTGGTGCTTTGCACCTCATACCAAAGGAGTTGTCACTGAAGATTGTTAGCAAGATTGAAGCTGGAGAGAGATTCTCTGTGTACATTGTCATTCCAATGTGGCCAGAAGGTATACCTGAAAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGAAGGACTATGGAGATGATGTATTCTGACATAGTTGAAGCCCTTCAAAGAAAAGGAATCAGAGCCAACCCAAGAGATTACTTGTCATTTTATTGCCTTGGAAACCGAGAGGGTAAGAAAATGAATGAATATACTCCTACAGAGGCACCAGAACCTGACAGTGATTATATTAGAGCACAAAATTCTAGAAGATTCATGATATATGTTCATGCCAAAATGATGATAGGTAAGGGATCCAACATATATATTACCTGTTTCTATTTTACATTTATTAGTGACACAGCTAACTATTTTACAACTGTTCCCGAAGATATTTGAACTGCGTTCTTTGAGGTTACATGATCAAATTCTTACCATTAAATTGACACTTTCCAATTAATTAGCACATACACCTTTGCAAAAGAAAATTTATTAACACATTCTTGTGACTTTTTTTTTTTTTTTGCTTCTTCATTCAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATAAATCAAAGATCAATGGATGGTGCTAGAGACAGTGAGATTGCAATAGGTGCATTTCAACCAAACCATATAGCCACCAGTAATAGACCACCAAAAGGACAAATATATGGATTTAGACGTGCACTATGGTATGAGCACCTTGGAGATATTGGTGATACAAGCTTCTTTGAAAATCCAGAAAGTTTGAATTGCATTAAGCTTGTAAATCGTTTTGCTGAGACCAATTGGGACATATACTCAAAGGATGCATTTGATGAATACAGATCATTTCATCACCTCATGCATTATCCAATACAAGTAACCAATAATGGAACCATAACTGCTCTTCCAGGATTTGAATGTTTTCCTGATACTAAGGCTAAGATTCTAGGTTCCAAATCTGAGTACCTTCCTCCAATTCTCACCACCTAG
Protein sequence

>MS.gene32629.t1

MHKRGEENSVTSQELFSMSMPMQARVDLDKARVGRTRMIGSPKWNETFHIYSAHSISNIIFTVKQDNPIGATLIGRAYVPVEQVIKGNIVNTWVNILDVDHRPIQGGSKIHVQIQFSHVKNDPNWSQGLKSPGFQGVPHTFFKQNNGCQITLYQDAHVLDGSVPYIPLDGVERYVPGKCWEDTYNAINDAKHFICITGWSVYTEITLIRDPNKSTRTTITLGELLKKKANEGVNVLMLVWDDRTSVPDFKKDGLMATHDQEIAEYFRNTNVHCVLCPRNPGDGRSIVQGFEISTMFTHHQKTIIVDSKVASSAQWKKRTITSFVGGIDLCDGRYDTMEHPLFSTLNTIHHDDFHQPNFPGASINKGGPREPWHDIHCKLEGPVAWDVLCNFEQRWEKQVGKQLIPLPSSMFREYDIARVSNVATANQNNTWNVQLFRSIDAGAASGFPQDPTEAAEKGLVTGKDNIIDRSIQDAYINAIRRAKNFVYIENQYFLGSSYGWKSSDIKVEDIGALHLIPKELSLKIVSKIEAGERFSVYIVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIVEALQRKGIRANPRDYLSFYCLGNREGKKMNEYTPTEAPEPDSDYIRAQNSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAIGAFQPNHIATSNRPPKGQIYGFRRALWYEHLGDIGDTSFFENPESLNCIKLVNRFAETNWDIYSKDAFDEYRSFHHLMHYPIQVTNNGTITALPGFECFPDTKAKILGSKSEYLPPILTT