Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051646.t1 | XP_024631091.1 | 97.6 | 903 | 22 | 0 | 1 | 903 | 1 | 903 | 0.00E+00 | 1823.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051646.t1 | A0A1P8AWH8 | 69.3 | 903 | 268 | 4 | 4 | 903 | 46 | 942 | 0.0e+00 | 1332.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051646.t1 | A0A072VDU8 | 97.6 | 903 | 22 | 0 | 1 | 903 | 1 | 903 | 0.0e+00 | 1823.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051646 | MS.gene064873 | 0.811944 | 5.43E-51 | -1.69E-46 |
| MS.gene051646 | MS.gene072894 | 0.813324 | 2.71E-51 | -1.69E-46 |
| MS.gene051646 | MS.gene20796 | 0.807106 | 5.94E-50 | -1.69E-46 |
| MS.gene051646 | MS.gene20846 | 0.82505 | 5.79E-54 | -1.69E-46 |
| MS.gene051646 | MS.gene24529 | 0.966392 | 7.35E-126 | -1.69E-46 |
| MS.gene051646 | MS.gene27620 | 0.820203 | 7.77E-53 | -1.69E-46 |
| MS.gene051646 | MS.gene32629 | 0.800383 | 1.48E-48 | -1.69E-46 |
| MS.gene051646 | MS.gene32957 | 0.960702 | 7.41E-119 | -1.69E-46 |
| MS.gene051646 | MS.gene42210 | 0.833783 | 4.37E-56 | -1.69E-46 |
| MS.gene051646 | MS.gene42391 | 0.80431 | 2.30E-49 | -1.69E-46 |
| MS.gene051646 | MS.gene61100 | 0.815077 | 1.11E-51 | -1.69E-46 |
| MS.gene051646 | MS.gene62740 | 0.802781 | 4.77E-49 | -1.69E-46 |
| MS.gene051646 | MS.gene84497 | 0.802065 | 6.70E-49 | -1.69E-46 |
| MS.gene051646 | MS.gene96042 | 0.840977 | 6.28E-58 | -1.69E-46 |
| MS.gene051646 | MS.gene99526 | 0.836794 | 7.59E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051646.t1 | MTR_1g017020 | 97.564 | 903 | 22 | 0 | 1 | 903 | 1 | 903 | 0.0 | 1833 |
| MS.gene051646.t1 | MTR_3g103610 | 78.817 | 727 | 152 | 1 | 177 | 903 | 16 | 740 | 0.0 | 1236 |
| MS.gene051646.t1 | MTR_3g103610 | 29.970 | 337 | 212 | 6 | 15 | 338 | 28 | 353 | 6.06e-33 | 137 |
| MS.gene051646.t1 | MTR_3g117800 | 32.724 | 492 | 311 | 9 | 423 | 903 | 2 | 484 | 1.98e-80 | 269 |
| MS.gene051646.t1 | MTR_3g117800 | 32.724 | 492 | 311 | 9 | 423 | 903 | 53 | 535 | 4.76e-80 | 269 |
| MS.gene051646.t1 | MTR_3g117800 | 34.633 | 436 | 268 | 7 | 478 | 903 | 26 | 454 | 3.49e-79 | 264 |
| MS.gene051646.t1 | MTR_7g024420 | 30.483 | 538 | 326 | 14 | 361 | 885 | 43 | 545 | 3.30e-68 | 238 |
| MS.gene051646.t1 | MTR_5g049180 | 29.870 | 539 | 324 | 13 | 361 | 883 | 43 | 543 | 1.19e-66 | 233 |
| MS.gene051646.t1 | MTR_1g106790 | 28.272 | 573 | 357 | 15 | 350 | 903 | 41 | 578 | 4.20e-64 | 226 |
| MS.gene051646.t1 | MTR_1g106910 | 28.846 | 572 | 357 | 15 | 332 | 888 | 25 | 561 | 1.71e-63 | 225 |
| MS.gene051646.t1 | MTR_4g074070 | 30.000 | 550 | 335 | 16 | 361 | 894 | 43 | 558 | 3.46e-63 | 224 |
| MS.gene051646.t1 | MTR_1g106770 | 28.000 | 575 | 359 | 18 | 347 | 903 | 7 | 544 | 7.35e-62 | 219 |
| MS.gene051646.t1 | MTR_1g106200 | 28.285 | 548 | 348 | 13 | 353 | 886 | 44 | 560 | 6.49e-60 | 215 |
| MS.gene051646.t1 | MTR_1g106200 | 27.788 | 547 | 319 | 14 | 353 | 886 | 50 | 533 | 3.40e-55 | 201 |
| MS.gene051646.t1 | MTR_4g121520 | 33.155 | 187 | 92 | 5 | 632 | 815 | 211 | 367 | 1.63e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051646.t1 | AT1G58370 | 69.469 | 904 | 265 | 5 | 4 | 903 | 46 | 942 | 0.0 | 1316 |
| MS.gene051646.t1 | AT1G58370 | 25.212 | 353 | 239 | 7 | 171 | 514 | 39 | 375 | 1.31e-29 | 127 |
| MS.gene051646.t1 | AT1G58370 | 69.469 | 904 | 265 | 5 | 4 | 903 | 18 | 914 | 0.0 | 1316 |
| MS.gene051646.t1 | AT1G58370 | 25.212 | 353 | 239 | 7 | 171 | 514 | 11 | 347 | 1.44e-29 | 127 |
| MS.gene051646.t1 | AT1G10050 | 60.289 | 899 | 333 | 9 | 13 | 903 | 181 | 1063 | 0.0 | 1123 |
| MS.gene051646.t1 | AT1G10050 | 34.808 | 520 | 300 | 11 | 15 | 519 | 5 | 500 | 3.56e-72 | 258 |
| MS.gene051646.t1 | AT1G10050 | 60.289 | 899 | 333 | 9 | 13 | 903 | 181 | 1063 | 0.0 | 1123 |
| MS.gene051646.t1 | AT1G10050 | 34.808 | 520 | 300 | 11 | 15 | 519 | 5 | 500 | 3.56e-72 | 258 |
| MS.gene051646.t1 | AT1G10050 | 60.289 | 899 | 333 | 9 | 13 | 903 | 213 | 1095 | 0.0 | 1122 |
| MS.gene051646.t1 | AT1G10050 | 34.808 | 520 | 300 | 11 | 15 | 519 | 37 | 532 | 4.81e-72 | 258 |
| MS.gene051646.t1 | AT4G08160 | 65.768 | 742 | 237 | 6 | 172 | 903 | 15 | 749 | 0.0 | 1036 |
| MS.gene051646.t1 | AT4G08160 | 26.686 | 341 | 222 | 9 | 16 | 338 | 27 | 357 | 3.90e-27 | 119 |
| MS.gene051646.t1 | AT4G08160 | 66.154 | 650 | 203 | 6 | 172 | 811 | 15 | 657 | 0.0 | 904 |
| MS.gene051646.t1 | AT4G08160 | 26.686 | 341 | 222 | 9 | 16 | 338 | 27 | 357 | 2.35e-27 | 119 |
| MS.gene051646.t1 | AT4G38650 | 34.161 | 483 | 291 | 10 | 437 | 903 | 91 | 562 | 7.66e-81 | 272 |
| MS.gene051646.t1 | AT4G33830 | 27.322 | 549 | 357 | 12 | 361 | 897 | 47 | 565 | 9.22e-68 | 237 |
| MS.gene051646.t1 | AT4G33840 | 26.993 | 552 | 350 | 14 | 361 | 894 | 46 | 562 | 2.78e-62 | 221 |
| MS.gene051646.t1 | AT4G33860 | 27.737 | 548 | 343 | 15 | 361 | 890 | 46 | 558 | 2.81e-62 | 221 |
| MS.gene051646.t1 | AT4G38300 | 42.353 | 255 | 135 | 3 | 534 | 786 | 12 | 256 | 2.58e-61 | 209 |
| MS.gene051646.t1 | AT4G33810 | 28.745 | 494 | 314 | 16 | 422 | 891 | 33 | 512 | 5.57e-53 | 194 |
| MS.gene051646.t1 | AT4G33810 | 28.745 | 494 | 314 | 16 | 422 | 891 | 33 | 512 | 5.57e-53 | 194 |
| MS.gene051646.t1 | AT4G33810 | 28.745 | 494 | 314 | 16 | 422 | 891 | 73 | 552 | 1.47e-52 | 194 |
| MS.gene051646.t1 | AT4G33810 | 28.745 | 494 | 314 | 16 | 422 | 891 | 73 | 552 | 1.47e-52 | 194 |
| MS.gene051646.t1 | AT4G33810 | 28.745 | 494 | 314 | 16 | 422 | 891 | 73 | 552 | 1.47e-52 | 194 |
| MS.gene051646.t1 | AT4G33820 | 27.941 | 476 | 310 | 13 | 437 | 891 | 90 | 553 | 2.23e-50 | 187 |
| MS.gene051646.t1 | AT2G14690 | 29.012 | 486 | 300 | 18 | 437 | 891 | 82 | 553 | 4.08e-48 | 181 |
Find 225 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGTTCAATGTATTTATT+TGG | 0.179825 | 1.3:+5525032 | None:intergenic |
| GGATAATGTTGTGGGGATTC+TGG | 0.188997 | 1.3:-5524785 | MS.gene051646:CDS |
| TGTTCTTCGCTTGATAAATT+AGG | 0.196978 | 1.3:-5524927 | MS.gene051646:CDS |
| AGTCTAGTCCCGTGAATTTC+AGG | 0.205315 | 1.3:+5525600 | None:intergenic |
| CTCGCGGACACTGCATCTTC+TGG | 0.228113 | 1.3:-5525334 | MS.gene051646:CDS |
| CTTGATAAATTAGGTATTCT+TGG | 0.245839 | 1.3:-5524918 | MS.gene051646:CDS |
| ACTGCTTTAGTTCGAATATA+TGG | 0.257375 | 1.3:-5527542 | MS.gene051646:CDS |
| GGTAAAATTGTTCCAAAGTC+TGG | 0.267756 | 1.3:-5527662 | MS.gene051646:CDS |
| CTAACTTGCACCATGGTGTT+AGG | 0.271288 | 1.3:+5525566 | None:intergenic |
| GTATTCTTGGTTTACCGATA+TGG | 0.275610 | 1.3:-5524905 | MS.gene051646:CDS |
| AAAGCAGCCAACAAAGATTA+TGG | 0.278671 | 1.3:-5526024 | MS.gene051646:CDS |
| ATAGATTAGGCAAAGATATA+AGG | 0.281339 | 1.3:-5525151 | MS.gene051646:CDS |
| TATTTAGAGGGACCTCCTTC+TGG | 0.284245 | 1.3:-5527078 | MS.gene051646:CDS |
| TCCTTGTGAAACACTTCAAC+TGG | 0.287746 | 1.3:-5525469 | MS.gene051646:CDS |
| TGGTTCTGCTTACACGGTTT+CGG | 0.290637 | 1.3:-5528362 | MS.gene051646:CDS |
| TATATTCAAGGTCCAGCTTC+TGG | 0.294775 | 1.3:-5525999 | MS.gene051646:CDS |
| GCTTGGGTCCGGATTGGTTC+TGG | 0.294793 | 1.3:-5526167 | MS.gene051646:CDS |
| TTGAGGATGGCCTGAATAAT+TGG | 0.299999 | 1.3:-5527730 | MS.gene051646:CDS |
| AGATGCAGTGTCCGCGAGTT+TGG | 0.301967 | 1.3:+5525339 | None:intergenic |
| CAGGGAAAATTCCTTCTAAA+TGG | 0.303874 | 1.3:-5527123 | MS.gene051646:CDS |
| GCAAAATATTTCCCAGACTT+TGG | 0.322421 | 1.3:+5527650 | None:intergenic |
| CAACAGAGCGAACACAATTC+TGG | 0.323587 | 1.3:-5527622 | MS.gene051646:CDS |
| GCTACAAATTATTTGTTCAT+TGG | 0.326978 | 1.3:-5528262 | MS.gene051646:CDS |
| TTCTTCCAGACCAATTATTC+AGG | 0.328653 | 1.3:+5527720 | None:intergenic |
| ATATTAATGAAGCTGGAAAA+AGG | 0.336260 | 1.3:-5524713 | MS.gene051646:CDS |
| AGCTTCTGGTGTAGACTTAA+TGG | 0.340829 | 1.3:-5525985 | MS.gene051646:CDS |
| TATCTTTGCCTAATCTATCT+TGG | 0.348489 | 1.3:+5525156 | None:intergenic |
| CAAAGCGGTCCTTTATTTAG+AGG | 0.352566 | 1.3:-5527091 | MS.gene051646:CDS |
| AATCTTGCATGTCTATCAAC+AGG | 0.358717 | 1.3:+5525942 | None:intergenic |
| AAGACATTCGTGCTTGATAA+AGG | 0.359363 | 1.3:-5524561 | MS.gene051646:CDS |
| GTATGATATACGTTGTCATT+TGG | 0.365712 | 1.3:+5528004 | None:intergenic |
| GACTTATCAAGTATCTGCTT+GGG | 0.366775 | 1.3:-5526183 | MS.gene051646:CDS |
| TGATCAAGGTGTTAATTTGA+TGG | 0.367462 | 1.3:-5528470 | MS.gene051646:CDS |
| CGACATTCTTGTTAATACTT+TGG | 0.374970 | 1.3:-5527052 | MS.gene051646:CDS |
| AGGTGTTAATTTGATGGATT+CGG | 0.376961 | 1.3:-5528464 | MS.gene051646:CDS |
| AAGATTATGGTTTATATTCA+AGG | 0.377953 | 1.3:-5526011 | MS.gene051646:CDS |
| ATATAAACCATAATCTTTGT+TGG | 0.377974 | 1.3:+5526017 | None:intergenic |
| GATAATGTTGTGGGGATTCT+GGG | 0.382110 | 1.3:-5524784 | MS.gene051646:CDS |
| AACACCTTGATCACCTGCTT+TGG | 0.385397 | 1.3:+5528480 | None:intergenic |
| GGTGTAGACTTAATGGTTGC+CGG | 0.385838 | 1.3:-5525978 | MS.gene051646:CDS |
| GGTGCACCAGTAGGTGGAAT+TGG | 0.386421 | 1.3:-5524990 | MS.gene051646:CDS |
| GGAATTCAGCAGGAGATAAC+TGG | 0.386735 | 1.3:-5527596 | MS.gene051646:CDS |
| CAAATGAGTTGAAGTGGTAT+TGG | 0.389711 | 1.3:-5525436 | MS.gene051646:CDS |
| CATAATAAACCCACAATTTG+AGG | 0.389860 | 1.3:-5527747 | MS.gene051646:CDS |
| GATGATAGATGGCATGAAAT+TGG | 0.390386 | 1.3:-5526065 | MS.gene051646:CDS |
| CTACAGAACTTCTGTTATGA+AGG | 0.391792 | 1.3:-5528155 | MS.gene051646:intron |
| GAACAAACGACAGGCCCAAC+TGG | 0.393175 | 1.3:+5524945 | None:intergenic |
| TGGATGAGGGGCCATTTAGA+AGG | 0.400067 | 1.3:+5527112 | None:intergenic |
| CTGGGAGTTGTTTATGAGTA+GGG | 0.400841 | 1.3:-5524766 | MS.gene051646:CDS |
| AAGGAGGTCCCTCTAAATAA+AGG | 0.403472 | 1.3:+5527082 | None:intergenic |
| CGGATTGGTTCTGGTTCAAA+TGG | 0.403976 | 1.3:-5526158 | MS.gene051646:CDS |
| CTTCTGTTATGAAGGGTAGC+TGG | 0.404922 | 1.3:-5528147 | MS.gene051646:CDS |
| TGACTTATCAAGTATCTGCT+TGG | 0.409021 | 1.3:-5526184 | MS.gene051646:CDS |
| ATGATCTTGAAGTTATGCTT+AGG | 0.411794 | 1.3:-5524836 | MS.gene051646:CDS |
| GAAGGGTAGCTGGGAAAAGT+TGG | 0.414542 | 1.3:-5528137 | MS.gene051646:CDS |
| GACCTTGCCAGCATTCGTTT+CGG | 0.423092 | 1.3:+5528416 | None:intergenic |
| ATCAAGTATCTGCTTGGGTC+CGG | 0.425041 | 1.3:-5526178 | MS.gene051646:CDS |
| GAGTCAGAAGACTGGTTAAT+CGG | 0.426105 | 1.3:+5525240 | None:intergenic |
| GAGTAGGGATAATGCGCATT+TGG | 0.427982 | 1.3:-5524751 | MS.gene051646:CDS |
| GATCTCCGAGAGCAGTATAT+AGG | 0.429907 | 1.3:-5527467 | MS.gene051646:CDS |
| TGCACTTTAACTGTTAAATC+CGG | 0.433057 | 1.3:-5526350 | MS.gene051646:CDS |
| AATTGAGATGCCAAGAGTTC+AGG | 0.433547 | 1.3:+5528527 | None:intergenic |
| TCTGGGAGTTGTTTATGAGT+AGG | 0.438626 | 1.3:-5524767 | MS.gene051646:CDS |
| CCGAGGTTTCAGATGATAGA+TGG | 0.439585 | 1.3:-5526076 | MS.gene051646:CDS |
| CTTATAAGCAAGTCAATTCC+AGG | 0.441038 | 1.3:+5528052 | None:intergenic |
| ATGGCTCACCCTGCTGTTGA+AGG | 0.441932 | 1.3:-5524807 | MS.gene051646:CDS |
| TCGCGGACACTGCATCTTCT+GGG | 0.447820 | 1.3:-5525333 | MS.gene051646:CDS |
| AACTTGGATGGGTCCTGCTC+AGG | 0.448950 | 1.3:-5526234 | MS.gene051646:CDS |
| CCGATGTACGAGCTACTTTG+TGG | 0.450712 | 1.3:-5527502 | MS.gene051646:CDS |
| AAATAAAATACAACCCGATC+GGG | 0.455406 | 1.3:+5528088 | None:intergenic |
| AATCAATTGACACCTCCATT+GGG | 0.455457 | 1.3:+5524532 | None:intergenic |
| TAATTCAAATTCCCTTGTTG+TGG | 0.456285 | 1.3:+5525407 | None:intergenic |
| ATATACTGCTCTCGGAGATC+TGG | 0.456294 | 1.3:+5527470 | None:intergenic |
| TAGATTAGGCAAAGATATAA+GGG | 0.456329 | 1.3:-5525150 | MS.gene051646:CDS |
| TACAGATTGGGTGACGCTGC+AGG | 0.458097 | 1.3:-5527142 | MS.gene051646:CDS |
| TATTTGGAAGGACCTGCTCC+TGG | 0.458649 | 1.3:-5528070 | MS.gene051646:CDS |
| TGCAGGCAACCGATACAGAT+TGG | 0.460115 | 1.3:-5527155 | MS.gene051646:CDS |
| TGGAGTATCCGACCTTTCTC+AGG | 0.461041 | 1.3:-5528332 | MS.gene051646:CDS |
| CTCTAAATAAAGGACCGCTT+TGG | 0.461695 | 1.3:+5527092 | None:intergenic |
| TCAAGTTCTGTAAACCATAT+CGG | 0.462220 | 1.3:+5524891 | None:intergenic |
| TCAGGCCATCCTCAAATTGT+GGG | 0.462609 | 1.3:+5527738 | None:intergenic |
| ACAAATTATTTGTTCATTGG+AGG | 0.463668 | 1.3:-5528259 | MS.gene051646:CDS |
| CAGTCTTCTGACTCGCTACA+AGG | 0.465425 | 1.3:-5525231 | MS.gene051646:CDS |
| AACAGGGAAAATTTGAAGTC+CGG | 0.469589 | 1.3:+5525959 | None:intergenic |
| AAATCAATTGACACCTCCAT+TGG | 0.470910 | 1.3:+5524531 | None:intergenic |
| TCTCAAATGACCTGAACTCT+TGG | 0.471487 | 1.3:-5528537 | MS.gene051646:CDS |
| GCCATTGGTGGAAGTATATG+AGG | 0.473608 | 1.3:+5526323 | None:intergenic |
| TAAAGGACCGCTTTGGATGA+GGG | 0.474678 | 1.3:+5527099 | None:intergenic |
| TTCTGTTATGAAGGGTAGCT+GGG | 0.476279 | 1.3:-5528146 | MS.gene051646:CDS |
| TAATAGAACACAAACTTGGA+TGG | 0.479975 | 1.3:-5526246 | MS.gene051646:CDS |
| AATCTTTCTGATGATACAAA+AGG | 0.480154 | 1.3:-5526392 | MS.gene051646:CDS |
| TTCAGGCCATCCTCAAATTG+TGG | 0.482816 | 1.3:+5527737 | None:intergenic |
| AAAAGTCCAACCTGTGCAGC+TGG | 0.483187 | 1.3:+5526991 | None:intergenic |
| TGAATTCCAATTCCACCTAC+TGG | 0.483936 | 1.3:+5524984 | None:intergenic |
| ATAAAGGACCGCTTTGGATG+AGG | 0.485822 | 1.3:+5527098 | None:intergenic |
| TAACTTGCACCATGGTGTTA+GGG | 0.487515 | 1.3:+5525567 | None:intergenic |
| ACAGAAACATGTGTTTCTAC+TGG | 0.488657 | 1.3:-5527782 | MS.gene051646:CDS |
| TGGACGTGTGCAGCGCAAGC+TGG | 0.489540 | 1.3:-5527576 | MS.gene051646:CDS |
| AACATTATCCCTTCAACAGC+AGG | 0.489684 | 1.3:+5524798 | None:intergenic |
| ACACAGAACGATTTCCCGAT+TGG | 0.490031 | 1.3:-5525539 | MS.gene051646:CDS |
| AGAGAATCTCTTGCCATTGG+TGG | 0.492478 | 1.3:+5526311 | None:intergenic |
| CCACTGATTGTCAGCGCCAA+GGG | 0.492864 | 1.3:+5526115 | None:intergenic |
| TGGAAGTATATGAGGAGAAC+CGG | 0.495790 | 1.3:+5526331 | None:intergenic |
| GTATCTGCTTGGGTCCGGAT+TGG | 0.496695 | 1.3:-5526173 | MS.gene051646:CDS |
| TGATCTTGAAGTTATGCTTA+GGG | 0.496879 | 1.3:-5524835 | MS.gene051646:CDS |
| CAAGTATGTAGCGGCCACTT+AGG | 0.497787 | 1.3:+5526273 | None:intergenic |
| GTAGGTGGAATTGGAATTCA+AGG | 0.497831 | 1.3:-5524981 | MS.gene051646:CDS |
| GTAAAATTGTTCCAAAGTCT+GGG | 0.498320 | 1.3:-5527661 | MS.gene051646:CDS |
| ACACTGCATCTTCTGGGAAG+TGG | 0.498790 | 1.3:-5525327 | MS.gene051646:CDS |
| TTCGACACCACCAGCTGCAC+AGG | 0.498795 | 1.3:-5527001 | MS.gene051646:intron |
| TGGCATCTCAATTGCTGCAA+TGG | 0.499335 | 1.3:-5528517 | MS.gene051646:CDS |
| AGCAAGTCAATTCCAGGAGC+AGG | 0.502349 | 1.3:+5528058 | None:intergenic |
| CTGCTGATGCATGTTCCAAT+CGG | 0.505222 | 1.3:+5525524 | None:intergenic |
| TGCTGATGCATGTTCCAATC+GGG | 0.506348 | 1.3:+5525525 | None:intergenic |
| TTCCATTGGTTCTGCTTACA+CGG | 0.506731 | 1.3:-5528368 | MS.gene051646:CDS |
| TTTGTTTGACAGATAATGGC+AGG | 0.509365 | 1.3:-5528616 | None:intergenic |
| GAAGGTGATATTAATGAAGC+TGG | 0.509952 | 1.3:-5524720 | MS.gene051646:CDS |
| CAAATTATTTGTTCATTGGA+GGG | 0.512221 | 1.3:-5528258 | MS.gene051646:intron |
| TCACCGACCGAAACGAATGC+TGG | 0.517919 | 1.3:-5528423 | MS.gene051646:CDS |
| ATATACGTTGTCATTTGGAA+TGG | 0.520996 | 1.3:+5528009 | None:intergenic |
| AATGATTATCATATTGAAGA+TGG | 0.521478 | 1.3:-5525074 | MS.gene051646:CDS |
| GCAGGCAACCGATACAGATT+GGG | 0.524439 | 1.3:-5527154 | MS.gene051646:CDS |
| GATGGCCTGAATAATTGGTC+TGG | 0.525772 | 1.3:-5527725 | MS.gene051646:CDS |
| GCTGACAATCAGTGGATCAA+TGG | 0.526079 | 1.3:-5526107 | MS.gene051646:CDS |
| TAACTAATAGAACACAAACT+TGG | 0.526101 | 1.3:-5526250 | MS.gene051646:CDS |
| TTCTCGGTGATCACCTGAGC+AGG | 0.526932 | 1.3:+5526221 | None:intergenic |
| AAAGCGGTCCTTTATTTAGA+GGG | 0.527863 | 1.3:-5527090 | MS.gene051646:CDS |
| CACTGTCGACTAAACCCGAT+CGG | 0.527900 | 1.3:-5528102 | MS.gene051646:CDS |
| CATTTGAACCAGAACCAATC+CGG | 0.530614 | 1.3:+5526159 | None:intergenic |
| TCGTCCAAAGCAGGTGATCA+AGG | 0.532341 | 1.3:-5528484 | MS.gene051646:CDS |
| CAAATAAAATACAACCCGAT+CGG | 0.533364 | 1.3:+5528087 | None:intergenic |
| AACTAAAGCAGTGATCTCAT+AGG | 0.538606 | 1.3:+5527553 | None:intergenic |
| TTAGCAGCATTGCTCTCACT+TGG | 0.539811 | 1.3:+5528580 | None:intergenic |
| CCATCTATCATCTGAAACCT+CGG | 0.542182 | 1.3:+5526076 | None:intergenic |
| ATAATGGCAGGAAACATCTC+TGG | 0.543211 | 1.3:-5528604 | MS.gene051646:CDS |
| ACTGTCGACTAAACCCGATC+GGG | 0.543731 | 1.3:-5528101 | MS.gene051646:CDS |
| AGAGATTCTCTTGGACCTCA+CGG | 0.543735 | 1.3:-5526299 | MS.gene051646:CDS |
| CGATGTACGAGCTACTTTGT+GGG | 0.544129 | 1.3:-5527501 | MS.gene051646:CDS |
| CCAAGAGAATCTCTTGCCAT+TGG | 0.545862 | 1.3:+5526308 | None:intergenic |
| CAAGGTCAATTCAACTTCAG+AGG | 0.546491 | 1.3:-5524636 | MS.gene051646:CDS |
| CATCAGCAGATTCCTGAGAA+AGG | 0.546491 | 1.3:+5528320 | None:intergenic |
| CCCTTGGCGCTGACAATCAG+TGG | 0.546637 | 1.3:-5526115 | MS.gene051646:CDS |
| TATGTAATTTCGTCCAAAGC+AGG | 0.547223 | 1.3:-5528493 | MS.gene051646:CDS |
| GATTGTGTTGCATGATTCCA+TGG | 0.547938 | 1.3:-5527690 | MS.gene051646:CDS |
| CAATGCCTATATACTGCTCT+CGG | 0.551465 | 1.3:+5527462 | None:intergenic |
| CAGCGTCACCCAATCTGTAT+CGG | 0.552312 | 1.3:+5527146 | None:intergenic |
| GATGTTGTCCTGAAATTCAC+GGG | 0.552954 | 1.3:-5525608 | MS.gene051646:CDS |
| ATCACAGACAGAATTTCCAT+TGG | 0.553945 | 1.3:-5528382 | MS.gene051646:CDS |
| ATTAAGTCTACACCAGAAGC+TGG | 0.555364 | 1.3:+5525987 | None:intergenic |
| ACAGATTGGGTGACGCTGCA+GGG | 0.562053 | 1.3:-5527141 | MS.gene051646:CDS |
| ATTCTGGAATGGAATTCAGC+AGG | 0.562599 | 1.3:-5527606 | MS.gene051646:CDS |
| GACACATAGATAGTCCAGTT+GGG | 0.564049 | 1.3:-5524959 | MS.gene051646:CDS |
| TGTTGAAGGGATAATGTTGT+GGG | 0.565574 | 1.3:-5524793 | MS.gene051646:CDS |
| TTCTAGCTTTGAAACAAGAG+TGG | 0.568232 | 1.3:-5524689 | MS.gene051646:CDS |
| CTGTTGAAGGGATAATGTTG+TGG | 0.569366 | 1.3:-5524794 | MS.gene051646:CDS |
| TGATGTTGTCCTGAAATTCA+CGG | 0.569487 | 1.3:-5525609 | MS.gene051646:CDS |
| TGCATCTTCTGGGAAGTGGA+TGG | 0.570497 | 1.3:-5525323 | MS.gene051646:CDS |
| CCCAGTTGAAGTGTTTCACA+AGG | 0.574593 | 1.3:+5525468 | None:intergenic |
| CATGGTCATGTTGATGAACA+AGG | 0.575070 | 1.3:-5524654 | MS.gene051646:CDS |
| CAAAATGTGAATGTTGCCCT+TGG | 0.576433 | 1.3:-5526131 | MS.gene051646:CDS |
| TCCACTGATTGTCAGCGCCA+AGG | 0.576601 | 1.3:+5526114 | None:intergenic |
| TACAGAACTTCTGTTATGAA+GGG | 0.577471 | 1.3:-5528154 | MS.gene051646:intron |
| AATAGAACACAAACTTGGAT+GGG | 0.580771 | 1.3:-5526245 | MS.gene051646:CDS |
| TTTCTGATGATACAAAAGGA+TGG | 0.583068 | 1.3:-5526388 | MS.gene051646:CDS |
| CCAATGGCAAGAGATTCTCT+TGG | 0.584474 | 1.3:-5526308 | MS.gene051646:CDS |
| ATTCTTGATTTGCAAGAACA+AGG | 0.585580 | 1.3:-5525011 | MS.gene051646:CDS |
| ACACAAGGTTAAAAGATCAT+CGG | 0.586038 | 1.3:+5525376 | None:intergenic |
| AGCAGATTCCTGAGAAAGGT+CGG | 0.586373 | 1.3:+5528324 | None:intergenic |
| TCCTCATATACTTCCACCAA+TGG | 0.587699 | 1.3:-5526324 | MS.gene051646:CDS |
| ATGTAGCGGACGGATCTAGT+TGG | 0.589460 | 1.3:+5525105 | None:intergenic |
| ACAAAAGGATGGTTTCCACT+TGG | 0.589690 | 1.3:-5526377 | MS.gene051646:CDS |
| GAGCGAACACAATTCTGGAA+TGG | 0.589696 | 1.3:-5527617 | MS.gene051646:CDS |
| TGGCTCACCCTGCTGTTGAA+GGG | 0.590829 | 1.3:-5524806 | MS.gene051646:CDS |
| GACCGAAACGAATGCTGGCA+AGG | 0.591612 | 1.3:-5528418 | MS.gene051646:CDS |
| AAAGGACCGCTTTGGATGAG+GGG | 0.593030 | 1.3:+5527100 | None:intergenic |
| CCTTGTGAAACACTTCAACT+GGG | 0.594599 | 1.3:-5525468 | MS.gene051646:CDS |
| AGTTATGCTTAGGGAAGCCA+TGG | 0.595340 | 1.3:-5524826 | MS.gene051646:CDS |
| ACAAGAATGTCGGTGCCAGA+AGG | 0.599405 | 1.3:+5527063 | None:intergenic |
| CCACAAAGTAGCTCGTACAT+CGG | 0.600541 | 1.3:+5527502 | None:intergenic |
| GGACACATAGATAGTCCAGT+TGG | 0.600637 | 1.3:-5524960 | MS.gene051646:CDS |
| TTCAACAGCAGGGTGAGCCA+TGG | 0.602273 | 1.3:+5524809 | None:intergenic |
| AACCGTGTAAGCAGAACCAA+TGG | 0.602847 | 1.3:+5528366 | None:intergenic |
| TGATAAAGGTGACTCCCCAA+TGG | 0.604356 | 1.3:-5524547 | MS.gene051646:CDS |
| TTGCCAGCATTCGTTTCGGT+CGG | 0.605263 | 1.3:+5528420 | None:intergenic |
| TGGATGGAACTGTTCAGCAA+TGG | 0.607765 | 1.3:-5525307 | MS.gene051646:CDS |
| TATTGGACTGAGCCACAACA+AGG | 0.608767 | 1.3:-5525419 | MS.gene051646:CDS |
| TGTGCAGCTGGTGGTGTCGA+AGG | 0.611606 | 1.3:+5527003 | None:intergenic |
| CAAAGTATTAACAAGAATGT+CGG | 0.612075 | 1.3:+5527053 | None:intergenic |
| ATAAACCCACAATTTGAGGA+TGG | 0.616157 | 1.3:-5527743 | MS.gene051646:CDS |
| TGGTGTGTTCTAAAGTGTGC+AGG | 0.616439 | 1.3:-5527172 | MS.gene051646:intron |
| AGAATGTCGGTGCCAGAAGG+AGG | 0.617068 | 1.3:+5527066 | None:intergenic |
| GAACAAGGTGCACCAGTAGG+TGG | 0.617864 | 1.3:-5524996 | MS.gene051646:CDS |
| GATAGATGGCATGAAATTGG+TGG | 0.618322 | 1.3:-5526062 | MS.gene051646:CDS |
| TGTTTGCAAATGAGTTGAAG+TGG | 0.620891 | 1.3:-5525442 | MS.gene051646:CDS |
| GGACCTCACGGAATCCTAAG+TGG | 0.625715 | 1.3:-5526287 | MS.gene051646:CDS |
| CTTGTAGCGAGTCAGAAGAC+TGG | 0.627289 | 1.3:+5525232 | None:intergenic |
| TTCACAAACAATGTAGCGGA+CGG | 0.628115 | 1.3:+5525095 | None:intergenic |
| CAAGAACAAGGTGCACCAGT+AGG | 0.631924 | 1.3:-5524999 | MS.gene051646:CDS |
| TCAAGCGAAGAACAAACGAC+AGG | 0.636980 | 1.3:+5524936 | None:intergenic |
| GAGTGGCTATCTCACAGTCA+TGG | 0.637603 | 1.3:-5524672 | MS.gene051646:CDS |
| GACAATCAGTGGATCAATGG+AGG | 0.638760 | 1.3:-5526104 | MS.gene051646:CDS |
| ATCATTCACAAACAATGTAG+CGG | 0.639829 | 1.3:+5525091 | None:intergenic |
| ATCAATTGACACCTCCATTG+GGG | 0.643205 | 1.3:+5524533 | None:intergenic |
| GTTAAAGTGCAATTACCAAG+TGG | 0.647484 | 1.3:+5526362 | None:intergenic |
| GCAGCTGGTGGTGTCGAAGG+AGG | 0.648412 | 1.3:+5527006 | None:intergenic |
| TTTAAAGATGCAGACAGACA+AGG | 0.654021 | 1.3:-5525913 | MS.gene051646:intron |
| GCGCATTTGGTGAATGCTGA+AGG | 0.654917 | 1.3:-5524738 | MS.gene051646:CDS |
| AGTCTTCTGACTCGCTACAA+GGG | 0.658164 | 1.3:-5525230 | MS.gene051646:CDS |
| GGTAGCTGGGAAAAGTTGGA+AGG | 0.662560 | 1.3:-5528133 | MS.gene051646:CDS |
| TTGCATGATTCCATGGCAGA+TGG | 0.665285 | 1.3:-5527683 | MS.gene051646:CDS |
| TAAAGGTGACTCCCCAATGG+AGG | 0.666453 | 1.3:-5524544 | MS.gene051646:CDS |
| TATTAGTTACAAGTATGTAG+CGG | 0.676314 | 1.3:+5526264 | None:intergenic |
| ATCTTGCATGTCTATCAACA+GGG | 0.678115 | 1.3:+5525943 | None:intergenic |
| GTTAACAATGAAATGCTGCA+TGG | 0.679600 | 1.3:-5525188 | MS.gene051646:CDS |
| ACATTATCCCTTCAACAGCA+GGG | 0.679952 | 1.3:+5524799 | None:intergenic |
| TGTTTGTCTAACTTGCACCA+TGG | 0.684181 | 1.3:+5525559 | None:intergenic |
| TCTATGAATGAATATGTGAG+AGG | 0.691709 | 1.3:-5524861 | MS.gene051646:CDS |
| AGTCCAACCTGTGCAGCTGG+TGG | 0.701591 | 1.3:+5526994 | None:intergenic |
| GTTGAAGGGATAATGTTGTG+GGG | 0.711478 | 1.3:-5524792 | MS.gene051646:CDS |
| AAGTACAAGATCCAAACTCG+CGG | 0.714282 | 1.3:-5525350 | MS.gene051646:CDS |
| GATCAATGGAGGACAAACCG+AGG | 0.714432 | 1.3:-5526093 | MS.gene051646:CDS |
| ATTGGACTGAGCCACAACAA+GGG | 0.716874 | 1.3:-5525418 | MS.gene051646:CDS |
| AAATGGCCCCTCATCCAAAG+CGG | 0.728507 | 1.3:-5527106 | MS.gene051646:CDS |
| CGGCCACTTAGGATTCCGTG+AGG | 0.735169 | 1.3:+5526284 | None:intergenic |
| TAGCAGCTACCCTAACACCA+TGG | 0.737080 | 1.3:-5525576 | MS.gene051646:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATAAATTGTTAG+AGG | + | chr1.3:5526676-5526695 | None:intergenic | 10.0% |
| !! | AAATTATCTGTAATTTACAT+TGG | - | chr1.3:5526163-5526182 | MS.gene051646:CDS | 15.0% |
| !! | AACTAGATAAAAATAACAAA+AGG | - | chr1.3:5525846-5525865 | MS.gene051646:intron | 15.0% |
| !!! | ATTTTACATTCTTTATTGAT+AGG | - | chr1.3:5527292-5527311 | MS.gene051646:intron | 15.0% |
| !! | AACAACTACTATAAATGTTA+AGG | + | chr1.3:5525927-5525946 | None:intergenic | 20.0% |
| !! | AAGATTATGGTTTATATTCA+AGG | - | chr1.3:5527117-5527136 | MS.gene051646:CDS | 20.0% |
| !! | AATGATTATCATATTGAAGA+TGG | - | chr1.3:5528054-5528073 | MS.gene051646:CDS | 20.0% |
| !! | ACTTCCAATAAATACTTATA+TGG | + | chr1.3:5526404-5526423 | None:intergenic | 20.0% |
| !! | ATATAAACCATAATCTTTGT+TGG | + | chr1.3:5527114-5527133 | None:intergenic | 20.0% |
| !! | ATGTGTTCAATGTATTTATT+TGG | + | chr1.3:5528099-5528118 | None:intergenic | 20.0% |
| !! | CTAATATATTCTTTCTTCAT+TGG | - | chr1.3:5527395-5527414 | MS.gene051646:intron | 20.0% |
| !! | GAATAAAAATGATTTGATGA+CGG | - | chr1.3:5527855-5527874 | MS.gene051646:intron | 20.0% |
| !!! | CAAAAATAGCTTTAATTTCT+CGG | + | chr1.3:5526926-5526945 | None:intergenic | 20.0% |
| !!! | TCTATCTTTTAAAGAAATTG+AGG | - | chr1.3:5524920-5524939 | MS.gene051646:CDS | 20.0% |
| ! | AAAATAATGGTGAACATGTA+AGG | + | chr1.3:5524953-5524972 | None:intergenic | 25.0% |
| ! | AAATAATGGTGAACATGTAA+GGG | + | chr1.3:5524952-5524971 | None:intergenic | 25.0% |
| ! | AACAGATTCATATTGAACTT+CGG | - | chr1.3:5526621-5526640 | MS.gene051646:intron | 25.0% |
| ! | AATAAGCTAAAAACAGCTTA+TGG | - | chr1.3:5526513-5526532 | MS.gene051646:intron | 25.0% |
| ! | AATCTTTCTGATGATACAAA+AGG | - | chr1.3:5526736-5526755 | MS.gene051646:intron | 25.0% |
| ! | ACAAATTATTTGTTCATTGG+AGG | - | chr1.3:5524869-5524888 | MS.gene051646:CDS | 25.0% |
| ! | AGAAGTTCTGTAGAAAATAA+TGG | + | chr1.3:5524966-5524985 | None:intergenic | 25.0% |
| ! | ATAGATTAGGCAAAGATATA+AGG | - | chr1.3:5527977-5527996 | MS.gene051646:intron | 25.0% |
| ! | ATATTAATGAAGCTGGAAAA+AGG | - | chr1.3:5528415-5528434 | MS.gene051646:CDS | 25.0% |
| ! | CAAATTATTTGTTCATTGGA+GGG | - | chr1.3:5524870-5524889 | MS.gene051646:CDS | 25.0% |
| ! | CAATATGAATCTGTTTGAAT+TGG | + | chr1.3:5526616-5526635 | None:intergenic | 25.0% |
| ! | CTTGATAAATTAGGTATTCT+TGG | - | chr1.3:5528210-5528229 | MS.gene051646:intron | 25.0% |
| ! | CTTGCCATATAAGTATTTAT+TGG | - | chr1.3:5526397-5526416 | MS.gene051646:CDS | 25.0% |
| ! | GCTACAAATTATTTGTTCAT+TGG | - | chr1.3:5524866-5524885 | MS.gene051646:CDS | 25.0% |
| ! | TAACTAATAGAACACAAACT+TGG | - | chr1.3:5526878-5526897 | MS.gene051646:intron | 25.0% |
| ! | TAGATTAGGCAAAGATATAA+GGG | - | chr1.3:5527978-5527997 | MS.gene051646:intron | 25.0% |
| ! | TATATTCTTTCTTCATTGGT+AGG | - | chr1.3:5527399-5527418 | MS.gene051646:intron | 25.0% |
| ! | TATTAGTTACAAGTATGTAG+CGG | + | chr1.3:5526867-5526886 | None:intergenic | 25.0% |
| ! | TCTTTATGGAATTCTACATA+TGG | - | chr1.3:5525177-5525196 | MS.gene051646:CDS | 25.0% |
| ! | TTAAAGAGTGAAACCATAAT+AGG | + | chr1.3:5525250-5525269 | None:intergenic | 25.0% |
| !! | AAGAGTCAATCTAAAATTCA+TGG | + | chr1.3:5525793-5525812 | None:intergenic | 25.0% |
| !! | CAAAGTATTAACAAGAATGT+CGG | + | chr1.3:5526078-5526097 | None:intergenic | 25.0% |
| !! | TCATTTTACCAAGATAGATT+AGG | - | chr1.3:5527964-5527983 | MS.gene051646:intron | 25.0% |
| !!! | ATTTTACAGAATGTTGCTTT+TGG | - | chr1.3:5526691-5526710 | MS.gene051646:intron | 25.0% |
| !!! | CAGATACTGTTATTTCTTTA+TGG | - | chr1.3:5525163-5525182 | MS.gene051646:CDS | 25.0% |
| !!! | TAAAAACTTGTTAGACTGTT+TGG | + | chr1.3:5526569-5526588 | None:intergenic | 25.0% |
| !!! | TGTTTTAATAACACACTAAC+TGG | - | chr1.3:5525288-5525307 | MS.gene051646:CDS | 25.0% |
| AAATAAAATACAACCCGATC+GGG | + | chr1.3:5525043-5525062 | None:intergenic | 30.0% | |
| AATAGAACACAAACTTGGAT+GGG | - | chr1.3:5526883-5526902 | MS.gene051646:intron | 30.0% | |
| ACACAAGGTTAAAAGATCAT+CGG | + | chr1.3:5527755-5527774 | None:intergenic | 30.0% | |
| ATCATTCACAAACAATGTAG+CGG | + | chr1.3:5528040-5528059 | None:intergenic | 30.0% | |
| ATGATCTTGAAGTTATGCTT+AGG | - | chr1.3:5528292-5528311 | MS.gene051646:CDS | 30.0% | |
| CAAATAAAATACAACCCGAT+CGG | + | chr1.3:5525044-5525063 | None:intergenic | 30.0% | |
| CATAATAAACCCACAATTTG+AGG | - | chr1.3:5525381-5525400 | MS.gene051646:CDS | 30.0% | |
| CGACATTCTTGTTAATACTT+TGG | - | chr1.3:5526076-5526095 | MS.gene051646:CDS | 30.0% | |
| GTAAAATTGTTCCAAAGTCT+GGG | - | chr1.3:5525467-5525486 | MS.gene051646:CDS | 30.0% | |
| GTAGATTGATATGAGCTTAT+AGG | + | chr1.3:5526246-5526265 | None:intergenic | 30.0% | |
| GTATGATATACGTTGTCATT+TGG | + | chr1.3:5525127-5525146 | None:intergenic | 30.0% | |
| TAATAGAACACAAACTTGGA+TGG | - | chr1.3:5526882-5526901 | MS.gene051646:intron | 30.0% | |
| TAATTCAAATTCCCTTGTTG+TGG | + | chr1.3:5527724-5527743 | None:intergenic | 30.0% | |
| TACAGAACTTCTGTTATGAA+GGG | - | chr1.3:5524974-5524993 | MS.gene051646:CDS | 30.0% | |
| TATCTTTGCCTAATCTATCT+TGG | + | chr1.3:5527975-5527994 | None:intergenic | 30.0% | |
| TCAAGTTCTGTAAACCATAT+CGG | + | chr1.3:5528240-5528259 | None:intergenic | 30.0% | |
| TCGTGCAAAACAAAAAAGTT+AGG | + | chr1.3:5526300-5526319 | None:intergenic | 30.0% | |
| TCTATGAATGAATATGTGAG+AGG | - | chr1.3:5528267-5528286 | MS.gene051646:CDS | 30.0% | |
| TGATCTTGAAGTTATGCTTA+GGG | - | chr1.3:5528293-5528312 | MS.gene051646:CDS | 30.0% | |
| TGCACTTTAACTGTTAAATC+CGG | - | chr1.3:5526778-5526797 | MS.gene051646:intron | 30.0% | |
| TGTTCTTCGCTTGATAAATT+AGG | - | chr1.3:5528201-5528220 | MS.gene051646:intron | 30.0% | |
| TTTCTGATGATACAAAAGGA+TGG | - | chr1.3:5526740-5526759 | MS.gene051646:intron | 30.0% | |
| ! | AACTAGTATTGAGCCTATTA+TGG | - | chr1.3:5525234-5525253 | MS.gene051646:CDS | 30.0% |
| ! | ACTGCTTTAGTTCGAATATA+TGG | - | chr1.3:5525586-5525605 | MS.gene051646:CDS | 30.0% |
| ! | ATATACGTTGTCATTTGGAA+TGG | + | chr1.3:5525122-5525141 | None:intergenic | 30.0% |
| ! | ATTAAGTTGTCTATCGAAAC+CGG | + | chr1.3:5526356-5526375 | None:intergenic | 30.0% |
| ! | GTCTTCGAAATTTTCTTTGA+TGG | + | chr1.3:5528552-5528571 | None:intergenic | 30.0% |
| ! | TGATCAAGGTGTTAATTTGA+TGG | - | chr1.3:5524658-5524677 | MS.gene051646:CDS | 30.0% |
| ! | TTCAACTTCAGAGGATTTTA+TGG | - | chr1.3:5528501-5528520 | MS.gene051646:CDS | 30.0% |
| !! | ACTTCTGAAATATGACGAAA+AGG | + | chr1.3:5525318-5525337 | None:intergenic | 30.0% |
| !! | AGGTGTTAATTTGATGGATT+CGG | - | chr1.3:5524664-5524683 | MS.gene051646:CDS | 30.0% |
| !! | ATTCTTGATTTGCAAGAACA+AGG | - | chr1.3:5528117-5528136 | MS.gene051646:CDS | 30.0% |
| !! | GAATTTTAGATTGACTCTTG+AGG | - | chr1.3:5525794-5525813 | MS.gene051646:intron | 30.0% |
| AAAGCAGCCAACAAAGATTA+TGG | - | chr1.3:5527104-5527123 | MS.gene051646:CDS | 35.0% | |
| AAATCAATTGACACCTCCAT+TGG | + | chr1.3:5528600-5528619 | None:intergenic | 35.0% | |
| AACTAAAGCAGTGATCTCAT+AGG | + | chr1.3:5525578-5525597 | None:intergenic | 35.0% | |
| AAGACATTCGTGCTTGATAA+AGG | - | chr1.3:5528567-5528586 | MS.gene051646:CDS | 35.0% | |
| AATCAATTGACACCTCCATT+GGG | + | chr1.3:5528599-5528618 | None:intergenic | 35.0% | |
| AATCTTGCATGTCTATCAAC+AGG | + | chr1.3:5527189-5527208 | None:intergenic | 35.0% | |
| ATAAACCCACAATTTGAGGA+TGG | - | chr1.3:5525385-5525404 | MS.gene051646:CDS | 35.0% | |
| ATCACAGACAGAATTTCCAT+TGG | - | chr1.3:5524746-5524765 | MS.gene051646:CDS | 35.0% | |
| ATCTTGCATGTCTATCAACA+GGG | + | chr1.3:5527188-5527207 | None:intergenic | 35.0% | |
| CAGGGAAAATTCCTTCTAAA+TGG | - | chr1.3:5526005-5526024 | MS.gene051646:CDS | 35.0% | |
| CTACAGAACTTCTGTTATGA+AGG | - | chr1.3:5524973-5524992 | MS.gene051646:CDS | 35.0% | |
| CTTATAAGCAAGTCAATTCC+AGG | + | chr1.3:5525079-5525098 | None:intergenic | 35.0% | |
| GAAGGTGATATTAATGAAGC+TGG | - | chr1.3:5528408-5528427 | MS.gene051646:CDS | 35.0% | |
| GACTTATCAAGTATCTGCTT+GGG | - | chr1.3:5526945-5526964 | MS.gene051646:intron | 35.0% | |
| GATGATAGATGGCATGAAAT+TGG | - | chr1.3:5527063-5527082 | MS.gene051646:CDS | 35.0% | |
| GCAAAATATTTCCCAGACTT+TGG | + | chr1.3:5525481-5525500 | None:intergenic | 35.0% | |
| GGTAAAATTGTTCCAAAGTC+TGG | - | chr1.3:5525466-5525485 | MS.gene051646:CDS | 35.0% | |
| GTATTCTTGGTTTACCGATA+TGG | - | chr1.3:5528223-5528242 | MS.gene051646:intron | 35.0% | |
| GTTAAAGTGCAATTACCAAG+TGG | + | chr1.3:5526769-5526788 | None:intergenic | 35.0% | |
| GTTAACAATGAAATGCTGCA+TGG | - | chr1.3:5527940-5527959 | MS.gene051646:intron | 35.0% | |
| TAGTAGTTGTTGAACAATGC+TGG | - | chr1.3:5525936-5525955 | MS.gene051646:CDS | 35.0% | |
| TATGTAATTTCGTCCAAAGC+AGG | - | chr1.3:5524635-5524654 | MS.gene051646:CDS | 35.0% | |
| TGACTTATCAAGTATCTGCT+TGG | - | chr1.3:5526944-5526963 | MS.gene051646:intron | 35.0% | |
| TGATGTTGTCCTGAAATTCA+CGG | - | chr1.3:5527519-5527538 | MS.gene051646:CDS | 35.0% | |
| TGTTGAAGGGATAATGTTGT+GGG | - | chr1.3:5528335-5528354 | MS.gene051646:CDS | 35.0% | |
| TTCTTCCAGACCAATTATTC+AGG | + | chr1.3:5525411-5525430 | None:intergenic | 35.0% | |
| TTTAAAGATGCAGACAGACA+AGG | - | chr1.3:5527215-5527234 | MS.gene051646:intron | 35.0% | |
| ! | AAAGCGGTCCTTTATTTAGA+GGG | - | chr1.3:5526038-5526057 | MS.gene051646:CDS | 35.0% |
| ! | AACAATTTTACCATCTGCCA+TGG | + | chr1.3:5525458-5525477 | None:intergenic | 35.0% |
| ! | AACAGGGAAAATTTGAAGTC+CGG | + | chr1.3:5527172-5527191 | None:intergenic | 35.0% |
| ! | ACAGAAACATGTGTTTCTAC+TGG | - | chr1.3:5525346-5525365 | MS.gene051646:CDS | 35.0% |
| ! | CAAATGAGTTGAAGTGGTAT+TGG | - | chr1.3:5527692-5527711 | MS.gene051646:CDS | 35.0% |
| ! | GATCTTGTACTTTTGACACA+AGG | + | chr1.3:5527770-5527789 | None:intergenic | 35.0% |
| ! | GCTGTTTCAATATGCTATCT+TGG | - | chr1.3:5526478-5526497 | MS.gene051646:intron | 35.0% |
| ! | GGTTCGAGTATATTTTACGT+TGG | + | chr1.3:5526225-5526244 | None:intergenic | 35.0% |
| ! | TGTTTGCAAATGAGTTGAAG+TGG | - | chr1.3:5527686-5527705 | MS.gene051646:CDS | 35.0% |
| ! | TTAAGTTGTCTATCGAAACC+GGG | + | chr1.3:5526355-5526374 | None:intergenic | 35.0% |
| !! | CGATCGGGTTGTATTTTATT+TGG | - | chr1.3:5525042-5525061 | MS.gene051646:CDS | 35.0% |
| !! | CGGGTTGTATTTTATTTGGA+AGG | - | chr1.3:5525046-5525065 | MS.gene051646:CDS | 35.0% |
| !! | TTCTAGCTTTGAAACAAGAG+TGG | - | chr1.3:5528439-5528458 | MS.gene051646:CDS | 35.0% |
| !!! | TGGCTGCTTTTCAATTCTAA+AGG | + | chr1.3:5527094-5527113 | None:intergenic | 35.0% |
| !!! | TTTTTGTTTTGCACGAGCAT+TGG | - | chr1.3:5526304-5526323 | MS.gene051646:CDS | 35.0% |
| AACATTATCCCTTCAACAGC+AGG | + | chr1.3:5528333-5528352 | None:intergenic | 40.0% | |
| AAGGAGGTCCCTCTAAATAA+AGG | + | chr1.3:5526049-5526068 | None:intergenic | 40.0% | |
| AAGTACAAGATCCAAACTCG+CGG | - | chr1.3:5527778-5527797 | MS.gene051646:CDS | 40.0% | |
| AATTGAGATGCCAAGAGTTC+AGG | + | chr1.3:5524604-5524623 | None:intergenic | 40.0% | |
| ACAAAAGGATGGTTTCCACT+TGG | - | chr1.3:5526751-5526770 | MS.gene051646:intron | 40.0% | |
| ACATTATCCCTTCAACAGCA+GGG | + | chr1.3:5528332-5528351 | None:intergenic | 40.0% | |
| AGACTGTTTGGAAGAGCTAA+TGG | + | chr1.3:5526557-5526576 | None:intergenic | 40.0% | |
| AGCTTCTGGTGTAGACTTAA+TGG | - | chr1.3:5527143-5527162 | MS.gene051646:CDS | 40.0% | |
| ATCAATTGACACCTCCATTG+GGG | + | chr1.3:5528598-5528617 | None:intergenic | 40.0% | |
| ATTAAGTCTACACCAGAAGC+TGG | + | chr1.3:5527144-5527163 | None:intergenic | 40.0% | |
| CAAAATGTGAATGTTGCCCT+TGG | - | chr1.3:5526997-5527016 | MS.gene051646:intron | 40.0% | |
| CAAGGTCAATTCAACTTCAG+AGG | - | chr1.3:5528492-5528511 | MS.gene051646:CDS | 40.0% | |
| CAATGCCTATATACTGCTCT+CGG | + | chr1.3:5525669-5525688 | None:intergenic | 40.0% | |
| CATTTGAACCAGAACCAATC+CGG | + | chr1.3:5526972-5526991 | None:intergenic | 40.0% | |
| CCTTGTGAAACACTTCAACT+GGG | - | chr1.3:5527660-5527679 | MS.gene051646:CDS | 40.0% | |
| CTCTAAATAAAGGACCGCTT+TGG | + | chr1.3:5526039-5526058 | None:intergenic | 40.0% | |
| CTGGGAGTTGTTTATGAGTA+GGG | - | chr1.3:5528362-5528381 | MS.gene051646:CDS | 40.0% | |
| CTGTTGAAGGGATAATGTTG+TGG | - | chr1.3:5528334-5528353 | MS.gene051646:CDS | 40.0% | |
| GACACATAGATAGTCCAGTT+GGG | - | chr1.3:5528169-5528188 | MS.gene051646:intron | 40.0% | |
| GACTGTTTGGAAGAGCTAAT+GGG | + | chr1.3:5526556-5526575 | None:intergenic | 40.0% | |
| GATAATGTTGTGGGGATTCT+GGG | - | chr1.3:5528344-5528363 | MS.gene051646:CDS | 40.0% | |
| GATAGATGGCATGAAATTGG+TGG | - | chr1.3:5527066-5527085 | MS.gene051646:CDS | 40.0% | |
| GATGTTGTCCTGAAATTCAC+GGG | - | chr1.3:5527520-5527539 | MS.gene051646:CDS | 40.0% | |
| GATTGTGTTGCATGATTCCA+TGG | - | chr1.3:5525438-5525457 | MS.gene051646:CDS | 40.0% | |
| GTAGGTGGAATTGGAATTCA+AGG | - | chr1.3:5528147-5528166 | MS.gene051646:CDS | 40.0% | |
| GTTGAAGGGATAATGTTGTG+GGG | - | chr1.3:5528336-5528355 | MS.gene051646:CDS | 40.0% | |
| TATATTCAAGGTCCAGCTTC+TGG | - | chr1.3:5527129-5527148 | MS.gene051646:CDS | 40.0% | |
| TCCTCATATACTTCCACCAA+TGG | - | chr1.3:5526804-5526823 | MS.gene051646:intron | 40.0% | |
| TCCTTGTGAAACACTTCAAC+TGG | - | chr1.3:5527659-5527678 | MS.gene051646:CDS | 40.0% | |
| TCGCTAATGCAGAAAACTCA+TGG | + | chr1.3:5525895-5525914 | None:intergenic | 40.0% | |
| TCTCAAATGACCTGAACTCT+TGG | - | chr1.3:5524591-5524610 | MS.gene051646:CDS | 40.0% | |
| TCTGGGAGTTGTTTATGAGT+AGG | - | chr1.3:5528361-5528380 | MS.gene051646:CDS | 40.0% | |
| TGAATTCCAATTCCACCTAC+TGG | + | chr1.3:5528147-5528166 | None:intergenic | 40.0% | |
| TTCTGTTATGAAGGGTAGCT+GGG | - | chr1.3:5524982-5525001 | MS.gene051646:CDS | 40.0% | |
| TTGAGGATGGCCTGAATAAT+TGG | - | chr1.3:5525398-5525417 | MS.gene051646:CDS | 40.0% | |
| ! | AGGGCAACATTCACATTTTG+TGG | + | chr1.3:5526997-5527016 | None:intergenic | 40.0% |
| ! | CAAAGCGGTCCTTTATTTAG+AGG | - | chr1.3:5526037-5526056 | MS.gene051646:CDS | 40.0% |
| ! | CATGGTCATGTTGATGAACA+AGG | - | chr1.3:5528474-5528493 | MS.gene051646:CDS | 40.0% |
| ! | CCATCTATCATCTGAAACCT+CGG | + | chr1.3:5527055-5527074 | None:intergenic | 40.0% |
| ! | GAGTCAGAAGACTGGTTAAT+CGG | + | chr1.3:5527891-5527910 | None:intergenic | 40.0% |
| ! | GTTTTTCCACACTGCAGATT+CGG | - | chr1.3:5527491-5527510 | MS.gene051646:CDS | 40.0% |
| ! | TAACTTGCACCATGGTGTTA+GGG | + | chr1.3:5527564-5527583 | None:intergenic | 40.0% |
| ! | TGGAAGTATATGAGGAGAAC+CGG | + | chr1.3:5526800-5526819 | None:intergenic | 40.0% |
| ! | TGTTTGTCTAACTTGCACCA+TGG | + | chr1.3:5527572-5527591 | None:intergenic | 40.0% |
| ! | TTCACAAACAATGTAGCGGA+CGG | + | chr1.3:5528036-5528055 | None:intergenic | 40.0% |
| !! | ATTCTGGAATGGAATTCAGC+AGG | - | chr1.3:5525522-5525541 | MS.gene051646:CDS | 40.0% |
| !! | TTCCATTGGTTCTGCTTACA+CGG | - | chr1.3:5524760-5524779 | MS.gene051646:CDS | 40.0% |
| AACACCTTGATCACCTGCTT+TGG | + | chr1.3:5524651-5524670 | None:intergenic | 45.0% | |
| AACCGTGTAAGCAGAACCAA+TGG | + | chr1.3:5524765-5524784 | None:intergenic | 45.0% | |
| AAGAACTTAGCTGTTGCCCT+AGG | - | chr1.3:5526329-5526348 | MS.gene051646:CDS | 45.0% | |
| ACACAGAACGATTTCCCGAT+TGG | - | chr1.3:5527589-5527608 | MS.gene051646:CDS | 45.0% | |
| AGAGAATCTCTTGCCATTGG+TGG | + | chr1.3:5526820-5526839 | None:intergenic | 45.0% | |
| AGAGATTCTCTTGGACCTCA+CGG | - | chr1.3:5526829-5526848 | MS.gene051646:intron | 45.0% | |
| AGCAGATTCCTGAGAAAGGT+CGG | + | chr1.3:5524807-5524826 | None:intergenic | 45.0% | |
| AGTCTAGTCCCGTGAATTTC+AGG | + | chr1.3:5527531-5527550 | None:intergenic | 45.0% | |
| AGTTATGCTTAGGGAAGCCA+TGG | - | chr1.3:5528302-5528321 | MS.gene051646:CDS | 45.0% | |
| ATATACTGCTCTCGGAGATC+TGG | + | chr1.3:5525661-5525680 | None:intergenic | 45.0% | |
| ATCAAGTATCTGCTTGGGTC+CGG | - | chr1.3:5526950-5526969 | MS.gene051646:intron | 45.0% | |
| ATTGGACTGAGCCACAACAA+GGG | - | chr1.3:5527710-5527729 | MS.gene051646:CDS | 45.0% | |
| CAACAGAGCGAACACAATTC+TGG | - | chr1.3:5525506-5525525 | MS.gene051646:CDS | 45.0% | |
| CATCAGCAGATTCCTGAGAA+AGG | + | chr1.3:5524811-5524830 | None:intergenic | 45.0% | |
| CCAAGAGAATCTCTTGCCAT+TGG | + | chr1.3:5526823-5526842 | None:intergenic | 45.0% | |
| CCAATGGCAAGAGATTCTCT+TGG | - | chr1.3:5526820-5526839 | MS.gene051646:intron | 45.0% | |
| CCACAAAGTAGCTCGTACAT+CGG | + | chr1.3:5525629-5525648 | None:intergenic | 45.0% | |
| CCGAGGTTTCAGATGATAGA+TGG | - | chr1.3:5527052-5527071 | MS.gene051646:CDS | 45.0% | |
| CTGCTGATGCATGTTCCAAT+CGG | + | chr1.3:5527607-5527626 | None:intergenic | 45.0% | |
| CTTCTGTTATGAAGGGTAGC+TGG | - | chr1.3:5524981-5525000 | MS.gene051646:CDS | 45.0% | |
| GACAATCAGTGGATCAATGG+AGG | - | chr1.3:5527024-5527043 | MS.gene051646:CDS | 45.0% | |
| GAGTAGGGATAATGCGCATT+TGG | - | chr1.3:5528377-5528396 | MS.gene051646:CDS | 45.0% | |
| GATCTCCGAGAGCAGTATAT+AGG | - | chr1.3:5525661-5525680 | MS.gene051646:intron | 45.0% | |
| GATGGCCTGAATAATTGGTC+TGG | - | chr1.3:5525403-5525422 | MS.gene051646:CDS | 45.0% | |
| GCTGACAATCAGTGGATCAA+TGG | - | chr1.3:5527021-5527040 | MS.gene051646:CDS | 45.0% | |
| GGAATTCAGCAGGAGATAAC+TGG | - | chr1.3:5525532-5525551 | MS.gene051646:CDS | 45.0% | |
| GGACACATAGATAGTCCAGT+TGG | - | chr1.3:5528168-5528187 | MS.gene051646:intron | 45.0% | |
| GGATAATGTTGTGGGGATTC+TGG | - | chr1.3:5528343-5528362 | MS.gene051646:CDS | 45.0% | |
| GGTGTAGACTTAATGGTTGC+CGG | - | chr1.3:5527150-5527169 | MS.gene051646:CDS | 45.0% | |
| TATTGGACTGAGCCACAACA+AGG | - | chr1.3:5527709-5527728 | MS.gene051646:CDS | 45.0% | |
| TATTTAGAGGGACCTCCTTC+TGG | - | chr1.3:5526050-5526069 | MS.gene051646:CDS | 45.0% | |
| TCAAGCGAAGAACAAACGAC+AGG | + | chr1.3:5528195-5528214 | None:intergenic | 45.0% | |
| TCAGGCCATCCTCAAATTGT+GGG | + | chr1.3:5525393-5525412 | None:intergenic | 45.0% | |
| TGATAAAGGTGACTCCCCAA+TGG | - | chr1.3:5528581-5528600 | MS.gene051646:CDS | 45.0% | |
| TGCTGATGCATGTTCCAATC+GGG | + | chr1.3:5527606-5527625 | None:intergenic | 45.0% | |
| TGGATGGAACTGTTCAGCAA+TGG | - | chr1.3:5527821-5527840 | MS.gene051646:intron | 45.0% | |
| TGGCATCTCAATTGCTGCAA+TGG | - | chr1.3:5524611-5524630 | MS.gene051646:CDS | 45.0% | |
| TTAGCAGCATTGCTCTCACT+TGG | + | chr1.3:5524551-5524570 | None:intergenic | 45.0% | |
| TTCAGGCCATCCTCAAATTG+TGG | + | chr1.3:5525394-5525413 | None:intergenic | 45.0% | |
| TTGCATGATTCCATGGCAGA+TGG | - | chr1.3:5525445-5525464 | MS.gene051646:CDS | 45.0% | |
| ! | AGTCTTCTGACTCGCTACAA+GGG | - | chr1.3:5527898-5527917 | MS.gene051646:intron | 45.0% |
| ! | ATAAAGGACCGCTTTGGATG+AGG | + | chr1.3:5526033-5526052 | None:intergenic | 45.0% |
| ! | CCCAGTTGAAGTGTTTCACA+AGG | + | chr1.3:5527663-5527682 | None:intergenic | 45.0% |
| ! | CGATGTACGAGCTACTTTGT+GGG | - | chr1.3:5525627-5525646 | MS.gene051646:intron | 45.0% |
| ! | CTAACTTGCACCATGGTGTT+AGG | + | chr1.3:5527565-5527584 | None:intergenic | 45.0% |
| ! | GAGCGAACACAATTCTGGAA+TGG | - | chr1.3:5525511-5525530 | MS.gene051646:CDS | 45.0% |
| ! | GCCATTGGTGGAAGTATATG+AGG | + | chr1.3:5526808-5526827 | None:intergenic | 45.0% |
| ! | TAAAGGACCGCTTTGGATGA+GGG | + | chr1.3:5526032-5526051 | None:intergenic | 45.0% |
| ! | TACACGGTTTCGGCTTTTGT+TGG | - | chr1.3:5524776-5524795 | MS.gene051646:CDS | 45.0% |
| ! | TGGTTCTGCTTACACGGTTT+CGG | - | chr1.3:5524766-5524785 | MS.gene051646:CDS | 45.0% |
| !! | CGGATTGGTTCTGGTTCAAA+TGG | - | chr1.3:5526970-5526989 | MS.gene051646:intron | 45.0% |
| !! | TGGTGTGTTCTAAAGTGTGC+AGG | - | chr1.3:5525956-5525975 | MS.gene051646:CDS | 45.0% |
| AAAAGTCCAACCTGTGCAGC+TGG | + | chr1.3:5526140-5526159 | None:intergenic | 50.0% | |
| AAATGGCCCCTCATCCAAAG+CGG | - | chr1.3:5526022-5526041 | MS.gene051646:CDS | 50.0% | |
| AGCAAGTCAATTCCAGGAGC+AGG | + | chr1.3:5525073-5525092 | None:intergenic | 50.0% | |
| CAAGAACAAGGTGCACCAGT+AGG | - | chr1.3:5528129-5528148 | MS.gene051646:CDS | 50.0% | |
| CAAGTATGTAGCGGCCACTT+AGG | + | chr1.3:5526858-5526877 | None:intergenic | 50.0% | |
| CAGCGTCACCCAATCTGTAT+CGG | + | chr1.3:5525985-5526004 | None:intergenic | 50.0% | |
| CTTGTAGCGAGTCAGAAGAC+TGG | + | chr1.3:5527899-5527918 | None:intergenic | 50.0% | |
| GAAGGGTAGCTGGGAAAAGT+TGG | - | chr1.3:5524991-5525010 | MS.gene051646:CDS | 50.0% | |
| GACCTTGCCAGCATTCGTTT+CGG | + | chr1.3:5524715-5524734 | None:intergenic | 50.0% | |
| GAGTGGCTATCTCACAGTCA+TGG | - | chr1.3:5528456-5528475 | MS.gene051646:CDS | 50.0% | |
| GATCAATGGAGGACAAACCG+AGG | - | chr1.3:5527035-5527054 | MS.gene051646:CDS | 50.0% | |
| GCAGGCAACCGATACAGATT+GGG | - | chr1.3:5525974-5525993 | MS.gene051646:CDS | 50.0% | |
| GGTAGCTGGGAAAAGTTGGA+AGG | - | chr1.3:5524995-5525014 | MS.gene051646:CDS | 50.0% | |
| TAAAGGTGACTCCCCAATGG+AGG | - | chr1.3:5528584-5528603 | MS.gene051646:CDS | 50.0% | |
| TAGCAGCTACCCTAACACCA+TGG | - | chr1.3:5527552-5527571 | MS.gene051646:CDS | 50.0% | |
| TATTTGGAAGGACCTGCTCC+TGG | - | chr1.3:5525058-5525077 | MS.gene051646:CDS | 50.0% | |
| TCGTCCAAAGCAGGTGATCA+AGG | - | chr1.3:5524644-5524663 | MS.gene051646:CDS | 50.0% | |
| TGCAGGCAACCGATACAGAT+TGG | - | chr1.3:5525973-5525992 | MS.gene051646:CDS | 50.0% | |
| TGGATGAGGGGCCATTTAGA+AGG | + | chr1.3:5526019-5526038 | None:intergenic | 50.0% | |
| TTGCCAGCATTCGTTTCGGT+CGG | + | chr1.3:5524711-5524730 | None:intergenic | 50.0% | |
| ! | AAAGGACCGCTTTGGATGAG+GGG | + | chr1.3:5526031-5526050 | None:intergenic | 50.0% |
| ! | ACACTGCATCTTCTGGGAAG+TGG | - | chr1.3:5527801-5527820 | MS.gene051646:intron | 50.0% |
| ! | ACTGTCGACTAAACCCGATC+GGG | - | chr1.3:5525027-5525046 | MS.gene051646:CDS | 50.0% |
| ! | CACTGTCGACTAAACCCGAT+CGG | - | chr1.3:5525026-5525045 | MS.gene051646:CDS | 50.0% |
| ! | CAGTCTTCTGACTCGCTACA+AGG | - | chr1.3:5527897-5527916 | MS.gene051646:intron | 50.0% |
| ! | CCGATGTACGAGCTACTTTG+TGG | - | chr1.3:5525626-5525645 | MS.gene051646:intron | 50.0% |
| ! | GCGCATTTGGTGAATGCTGA+AGG | - | chr1.3:5528390-5528409 | MS.gene051646:CDS | 50.0% |
| ! | TGCATCTTCTGGGAAGTGGA+TGG | - | chr1.3:5527805-5527824 | MS.gene051646:intron | 50.0% |
| ! | TGGAGTATCCGACCTTTCTC+AGG | - | chr1.3:5524796-5524815 | MS.gene051646:CDS | 50.0% |
| !! | ACAAGAATGTCGGTGCCAGA+AGG | + | chr1.3:5526068-5526087 | None:intergenic | 50.0% |
| !! | ATGTAGCGGACGGATCTAGT+TGG | + | chr1.3:5528026-5528045 | None:intergenic | 50.0% |
| AACTTGGATGGGTCCTGCTC+AGG | - | chr1.3:5526894-5526913 | MS.gene051646:intron | 55.0% | |
| ACAGATTGGGTGACGCTGCA+GGG | - | chr1.3:5525987-5526006 | MS.gene051646:CDS | 55.0% | |
| ACGCTTCCGAATCTGCAGTG+TGG | + | chr1.3:5527500-5527519 | None:intergenic | 55.0% | |
| AGATGCAGTGTCCGCGAGTT+TGG | + | chr1.3:5527792-5527811 | None:intergenic | 55.0% | |
| ATGGCTCACCCTGCTGTTGA+AGG | - | chr1.3:5528321-5528340 | MS.gene051646:CDS | 55.0% | |
| GAACAAACGACAGGCCCAAC+TGG | + | chr1.3:5528186-5528205 | None:intergenic | 55.0% | |
| GAACAAGGTGCACCAGTAGG+TGG | - | chr1.3:5528132-5528151 | MS.gene051646:CDS | 55.0% | |
| GACCGAAACGAATGCTGGCA+AGG | - | chr1.3:5524710-5524729 | MS.gene051646:CDS | 55.0% | |
| GGACCTCACGGAATCCTAAG+TGG | - | chr1.3:5526841-5526860 | MS.gene051646:intron | 55.0% | |
| GGTGCACCAGTAGGTGGAAT+TGG | - | chr1.3:5528138-5528157 | MS.gene051646:CDS | 55.0% | |
| GTATCTGCTTGGGTCCGGAT+TGG | - | chr1.3:5526955-5526974 | MS.gene051646:intron | 55.0% | |
| GTCTATCGAAACCGGGCCTA+GGG | + | chr1.3:5526348-5526367 | None:intergenic | 55.0% | |
| TACAGATTGGGTGACGCTGC+AGG | - | chr1.3:5525986-5526005 | MS.gene051646:CDS | 55.0% | |
| TCACCGACCGAAACGAATGC+TGG | - | chr1.3:5524705-5524724 | MS.gene051646:CDS | 55.0% | |
| TCGCGGACACTGCATCTTCT+GGG | - | chr1.3:5527795-5527814 | MS.gene051646:CDS | 55.0% | |
| TGGCTCACCCTGCTGTTGAA+GGG | - | chr1.3:5528322-5528341 | MS.gene051646:CDS | 55.0% | |
| TGTCTATCGAAACCGGGCCT+AGG | + | chr1.3:5526349-5526368 | None:intergenic | 55.0% | |
| TTCAACAGCAGGGTGAGCCA+TGG | + | chr1.3:5528322-5528341 | None:intergenic | 55.0% | |
| TTCTCGGTGATCACCTGAGC+AGG | + | chr1.3:5526910-5526929 | None:intergenic | 55.0% | |
| ! | CCACTGATTGTCAGCGCCAA+GGG | + | chr1.3:5527016-5527035 | None:intergenic | 55.0% |
| ! | TCCACTGATTGTCAGCGCCA+AGG | + | chr1.3:5527017-5527036 | None:intergenic | 55.0% |
| !! | AGAATGTCGGTGCCAGAAGG+AGG | + | chr1.3:5526065-5526084 | None:intergenic | 55.0% |
| ACACCACCAGCTGCACAGGT+TGG | - | chr1.3:5526131-5526150 | MS.gene051646:CDS | 60.0% | |
| AGTCCAACCTGTGCAGCTGG+TGG | + | chr1.3:5526137-5526156 | None:intergenic | 60.0% | |
| CGGCCACTTAGGATTCCGTG+AGG | + | chr1.3:5526847-5526866 | None:intergenic | 60.0% | |
| CTCGCGGACACTGCATCTTC+TGG | - | chr1.3:5527794-5527813 | MS.gene051646:CDS | 60.0% | |
| CTTAGCTGTTGCCCTAGGCC+CGG | - | chr1.3:5526334-5526353 | MS.gene051646:CDS | 60.0% | |
| TTCGACACCACCAGCTGCAC+AGG | - | chr1.3:5526127-5526146 | MS.gene051646:CDS | 60.0% | |
| ! | TGTGCAGCTGGTGGTGTCGA+AGG | + | chr1.3:5526128-5526147 | None:intergenic | 60.0% |
| !! | CCCTTGGCGCTGACAATCAG+TGG | - | chr1.3:5527013-5527032 | MS.gene051646:CDS | 60.0% |
| !! | GCTTGGGTCCGGATTGGTTC+TGG | - | chr1.3:5526961-5526980 | MS.gene051646:intron | 60.0% |
| TGGACGTGTGCAGCGCAAGC+TGG | - | chr1.3:5525552-5525571 | MS.gene051646:CDS | 65.0% | |
| ! | GCAGCTGGTGGTGTCGAAGG+AGG | + | chr1.3:5526125-5526144 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5524527 | 5528623 | 5524527 | ID=MS.gene051646 |
| chr1.3 | mRNA | 5524527 | 5528623 | 5524527 | ID=MS.gene051646.t1;Parent=MS.gene051646 |
| chr1.3 | exon | 5528259 | 5528623 | 5528259 | ID=MS.gene051646.t1.exon1;Parent=MS.gene051646.t1 |
| chr1.3 | CDS | 5528259 | 5528623 | 5528259 | ID=cds.MS.gene051646.t1;Parent=MS.gene051646.t1 |
| chr1.3 | exon | 5528015 | 5528171 | 5528015 | ID=MS.gene051646.t1.exon2;Parent=MS.gene051646.t1 |
| chr1.3 | CDS | 5528015 | 5528171 | 5528015 | ID=cds.MS.gene051646.t1;Parent=MS.gene051646.t1 |
| chr1.3 | exon | 5527458 | 5527816 | 5527458 | ID=MS.gene051646.t1.exon3;Parent=MS.gene051646.t1 |
| chr1.3 | CDS | 5527458 | 5527816 | 5527458 | ID=cds.MS.gene051646.t1;Parent=MS.gene051646.t1 |
| chr1.3 | exon | 5527002 | 5527179 | 5527002 | ID=MS.gene051646.t1.exon4;Parent=MS.gene051646.t1 |
| chr1.3 | CDS | 5527002 | 5527179 | 5527002 | ID=cds.MS.gene051646.t1;Parent=MS.gene051646.t1 |
| chr1.3 | exon | 5525914 | 5526450 | 5525914 | ID=MS.gene051646.t1.exon5;Parent=MS.gene051646.t1 |
| chr1.3 | CDS | 5525914 | 5526450 | 5525914 | ID=cds.MS.gene051646.t1;Parent=MS.gene051646.t1 |
| chr1.3 | exon | 5524527 | 5525642 | 5524527 | ID=MS.gene051646.t1.exon6;Parent=MS.gene051646.t1 |
| chr1.3 | CDS | 5524527 | 5525642 | 5524527 | ID=cds.MS.gene051646.t1;Parent=MS.gene051646.t1 |
| Gene Sequence |
| Protein sequence |
