Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32856.t1 | XP_013461811.1 | 91.9 | 371 | 30 | 0 | 1 | 371 | 1 | 371 | 1.00E-195 | 692.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32856.t1 | Q9C652 | 46.7 | 259 | 125 | 4 | 5 | 256 | 1 | 253 | 8.2e-53 | 209.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32856.t1 | A0A072V2H9 | 91.9 | 371 | 30 | 0 | 1 | 371 | 1 | 371 | 7.3e-196 | 692.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053008 | MS.gene32856 | 0.814734 | 1.33E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32856.t1 | MTR_3g103420 | 94.609 | 371 | 20 | 0 | 1 | 371 | 1 | 371 | 0.0 | 654 |
MS.gene32856.t1 | MTR_1g073690 | 54.872 | 195 | 85 | 2 | 5 | 198 | 1 | 193 | 3.78e-63 | 209 |
MS.gene32856.t1 | MTR_3g055990 | 53.646 | 192 | 82 | 2 | 5 | 196 | 1 | 185 | 2.40e-60 | 202 |
MS.gene32856.t1 | MTR_3g055990 | 53.646 | 192 | 82 | 2 | 5 | 196 | 1 | 185 | 3.08e-60 | 201 |
MS.gene32856.t1 | MTR_2g026180 | 52.910 | 189 | 84 | 2 | 8 | 196 | 2 | 185 | 1.89e-58 | 197 |
MS.gene32856.t1 | MTR_5g097580 | 51.562 | 192 | 86 | 2 | 5 | 196 | 1 | 185 | 1.02e-57 | 195 |
MS.gene32856.t1 | MTR_5g097580 | 51.562 | 192 | 86 | 2 | 5 | 196 | 1 | 185 | 1.41e-57 | 195 |
MS.gene32856.t1 | MTR_6g004810 | 40.000 | 190 | 94 | 2 | 11 | 199 | 46 | 216 | 2.32e-44 | 157 |
MS.gene32856.t1 | MTR_3g082650 | 34.759 | 187 | 102 | 3 | 11 | 196 | 19 | 186 | 3.01e-35 | 132 |
MS.gene32856.t1 | MTR_2g026180 | 54.622 | 119 | 49 | 2 | 78 | 196 | 2 | 115 | 8.00e-34 | 130 |
MS.gene32856.t1 | MTR_2g026180 | 35.897 | 78 | 49 | 1 | 11 | 87 | 37 | 114 | 6.13e-12 | 67.0 |
MS.gene32856.t1 | MTR_5g017280 | 31.633 | 196 | 114 | 2 | 8 | 203 | 2 | 177 | 6.42e-27 | 110 |
MS.gene32856.t1 | MTR_5g017280 | 30.841 | 214 | 113 | 3 | 11 | 194 | 93 | 301 | 3.42e-25 | 105 |
MS.gene32856.t1 | MTR_5g017280 | 31.633 | 196 | 114 | 2 | 8 | 203 | 2 | 177 | 1.21e-26 | 109 |
MS.gene32856.t1 | MTR_5g017280 | 30.841 | 214 | 113 | 3 | 11 | 194 | 93 | 301 | 6.40e-25 | 105 |
MS.gene32856.t1 | MTR_4g088010 | 28.090 | 267 | 145 | 9 | 6 | 263 | 72 | 300 | 5.71e-20 | 90.5 |
MS.gene32856.t1 | MTR_7g117495 | 43.750 | 80 | 44 | 1 | 6 | 84 | 14 | 93 | 1.88e-14 | 72.8 |
MS.gene32856.t1 | MTR_7g117495 | 43.750 | 80 | 44 | 1 | 6 | 84 | 14 | 93 | 2.03e-14 | 72.8 |
MS.gene32856.t1 | MTR_8g463890 | 25.000 | 188 | 126 | 3 | 6 | 193 | 69 | 241 | 2.32e-14 | 74.3 |
MS.gene32856.t1 | MTR_7g013730 | 46.914 | 81 | 41 | 1 | 10 | 88 | 40 | 120 | 1.15e-13 | 70.5 |
MS.gene32856.t1 | MTR_3g092490 | 43.750 | 80 | 44 | 1 | 6 | 84 | 22 | 101 | 1.30e-13 | 68.9 |
MS.gene32856.t1 | MTR_4g109540 | 44.304 | 79 | 42 | 1 | 11 | 87 | 43 | 121 | 2.07e-13 | 70.1 |
MS.gene32856.t1 | MTR_3g092490 | 43.750 | 80 | 44 | 1 | 6 | 84 | 22 | 101 | 2.08e-13 | 69.7 |
MS.gene32856.t1 | MTR_3g092490 | 43.750 | 80 | 44 | 1 | 6 | 84 | 22 | 101 | 2.23e-13 | 69.7 |
MS.gene32856.t1 | MTR_3g084040 | 36.047 | 86 | 55 | 0 | 112 | 197 | 31 | 116 | 3.18e-13 | 67.0 |
MS.gene32856.t1 | MTR_1g019150 | 26.616 | 263 | 158 | 12 | 12 | 262 | 213 | 452 | 3.19e-13 | 71.2 |
MS.gene32856.t1 | MTR_7g088140 | 22.872 | 188 | 141 | 2 | 6 | 193 | 123 | 306 | 6.25e-13 | 70.1 |
MS.gene32856.t1 | MTR_3g025880 | 45.570 | 79 | 41 | 1 | 11 | 87 | 45 | 123 | 6.70e-13 | 70.1 |
MS.gene32856.t1 | MTR_7g107580 | 23.664 | 262 | 160 | 6 | 6 | 266 | 12 | 234 | 7.97e-13 | 69.7 |
MS.gene32856.t1 | MTR_4g104470 | 29.353 | 201 | 116 | 6 | 2 | 195 | 114 | 295 | 9.36e-13 | 68.6 |
MS.gene32856.t1 | MTR_4g122650 | 28.333 | 180 | 98 | 5 | 10 | 184 | 88 | 241 | 1.16e-12 | 69.7 |
MS.gene32856.t1 | MTR_7g107580 | 23.664 | 262 | 159 | 7 | 6 | 266 | 12 | 233 | 1.27e-12 | 68.9 |
MS.gene32856.t1 | MTR_1g064230 | 30.256 | 195 | 130 | 4 | 7 | 195 | 81 | 275 | 1.28e-12 | 67.8 |
MS.gene32856.t1 | MTR_7g088140 | 22.872 | 188 | 141 | 2 | 6 | 193 | 123 | 306 | 1.35e-12 | 69.3 |
MS.gene32856.t1 | MTR_3g075500 | 28.061 | 196 | 124 | 5 | 8 | 198 | 107 | 290 | 1.45e-12 | 67.8 |
MS.gene32856.t1 | MTR_7g107580 | 23.664 | 262 | 159 | 7 | 6 | 266 | 12 | 233 | 2.13e-12 | 68.6 |
MS.gene32856.t1 | MTR_3g014000 | 45.455 | 88 | 35 | 2 | 10 | 88 | 34 | 117 | 5.44e-12 | 63.2 |
MS.gene32856.t1 | MTR_3g027140 | 27.513 | 189 | 116 | 6 | 11 | 192 | 61 | 235 | 6.75e-12 | 65.1 |
MS.gene32856.t1 | MTR_3g075500 | 28.834 | 163 | 102 | 3 | 8 | 168 | 107 | 257 | 2.15e-11 | 64.3 |
MS.gene32856.t1 | MTR_4g035310 | 37.333 | 75 | 47 | 0 | 118 | 192 | 17 | 91 | 2.78e-11 | 63.9 |
MS.gene32856.t1 | MTR_4g035310 | 37.333 | 75 | 47 | 0 | 118 | 192 | 17 | 91 | 2.89e-11 | 63.9 |
MS.gene32856.t1 | MTR_7g013740 | 45.000 | 80 | 42 | 1 | 10 | 87 | 40 | 119 | 3.53e-11 | 61.2 |
MS.gene32856.t1 | MTR_4g109540 | 41.379 | 87 | 41 | 2 | 11 | 87 | 43 | 129 | 4.92e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32856.t1 | AT1G58470 | 54.500 | 200 | 84 | 3 | 5 | 197 | 1 | 200 | 7.64e-67 | 215 |
MS.gene32856.t1 | AT1G58470 | 54.500 | 200 | 84 | 3 | 5 | 197 | 1 | 200 | 7.64e-67 | 215 |
MS.gene32856.t1 | AT4G14300 | 53.846 | 195 | 85 | 2 | 5 | 198 | 1 | 191 | 1.23e-64 | 211 |
MS.gene32856.t1 | AT4G14300 | 53.846 | 195 | 85 | 2 | 5 | 198 | 1 | 191 | 1.23e-64 | 211 |
MS.gene32856.t1 | AT4G26650 | 52.195 | 205 | 82 | 4 | 1 | 196 | 1 | 198 | 8.01e-60 | 200 |
MS.gene32856.t1 | AT2G33410 | 49.490 | 196 | 92 | 3 | 5 | 198 | 1 | 191 | 9.42e-60 | 198 |
MS.gene32856.t1 | AT3G07810 | 52.083 | 192 | 87 | 1 | 5 | 196 | 1 | 187 | 1.06e-59 | 201 |
MS.gene32856.t1 | AT3G07810 | 52.083 | 192 | 87 | 1 | 5 | 196 | 1 | 187 | 1.41e-59 | 200 |
MS.gene32856.t1 | AT4G26650 | 52.792 | 197 | 79 | 3 | 7 | 196 | 12 | 201 | 1.62e-59 | 199 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 1.80e-59 | 199 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 1.80e-59 | 199 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 1.80e-59 | 199 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 1.80e-59 | 199 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 1.80e-59 | 199 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 3.50e-59 | 198 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 3.50e-59 | 198 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 3.50e-59 | 198 |
MS.gene32856.t1 | AT5G55550 | 47.863 | 234 | 107 | 5 | 5 | 229 | 1 | 228 | 3.50e-59 | 198 |
MS.gene32856.t1 | AT5G47620 | 46.296 | 216 | 92 | 3 | 5 | 207 | 1 | 205 | 4.58e-53 | 181 |
MS.gene32856.t1 | AT5G47620 | 46.296 | 216 | 92 | 3 | 5 | 207 | 1 | 205 | 4.58e-53 | 181 |
MS.gene32856.t1 | AT5G47620 | 46.296 | 216 | 92 | 3 | 5 | 207 | 1 | 205 | 4.58e-53 | 181 |
MS.gene32856.t1 | AT5G55550 | 38.676 | 287 | 102 | 6 | 5 | 229 | 1 | 275 | 9.05e-51 | 177 |
MS.gene32856.t1 | AT5G55550 | 38.676 | 287 | 102 | 6 | 5 | 229 | 1 | 275 | 1.18e-50 | 177 |
MS.gene32856.t1 | AT5G47620 | 42.017 | 238 | 92 | 4 | 5 | 207 | 1 | 227 | 4.03e-48 | 169 |
MS.gene32856.t1 | AT5G40490 | 41.799 | 189 | 90 | 3 | 11 | 198 | 43 | 212 | 2.27e-41 | 150 |
MS.gene32856.t1 | AT3G13224 | 37.766 | 188 | 99 | 2 | 10 | 196 | 19 | 189 | 3.46e-40 | 145 |
MS.gene32856.t1 | AT3G13224 | 37.968 | 187 | 98 | 2 | 11 | 196 | 11 | 180 | 7.43e-40 | 144 |
MS.gene32856.t1 | AT3G13224 | 44.048 | 84 | 46 | 1 | 112 | 195 | 5 | 87 | 4.32e-16 | 79.0 |
MS.gene32856.t1 | AT1G17640 | 41.146 | 192 | 96 | 2 | 11 | 201 | 67 | 242 | 2.76e-39 | 144 |
MS.gene32856.t1 | AT1G17640 | 41.146 | 192 | 96 | 2 | 11 | 201 | 67 | 242 | 2.76e-39 | 144 |
MS.gene32856.t1 | AT1G17640 | 41.146 | 192 | 96 | 2 | 11 | 201 | 67 | 242 | 2.76e-39 | 144 |
MS.gene32856.t1 | AT3G13224 | 38.788 | 165 | 84 | 1 | 11 | 175 | 20 | 167 | 7.06e-36 | 131 |
MS.gene32856.t1 | AT3G13224 | 46.154 | 78 | 41 | 1 | 118 | 195 | 20 | 96 | 3.27e-15 | 74.7 |
MS.gene32856.t1 | AT5G40490 | 40.936 | 171 | 81 | 3 | 29 | 198 | 44 | 195 | 7.02e-35 | 132 |
MS.gene32856.t1 | AT5G40490 | 39.506 | 81 | 47 | 2 | 124 | 204 | 32 | 110 | 4.41e-11 | 64.3 |
MS.gene32856.t1 | AT4G36960 | 36.170 | 188 | 100 | 2 | 11 | 198 | 4 | 171 | 1.02e-30 | 120 |
MS.gene32856.t1 | AT4G36960 | 27.500 | 240 | 129 | 3 | 11 | 207 | 92 | 329 | 5.47e-19 | 87.8 |
MS.gene32856.t1 | AT4G36960 | 36.170 | 188 | 100 | 2 | 11 | 198 | 4 | 171 | 1.02e-30 | 120 |
MS.gene32856.t1 | AT4G36960 | 27.500 | 240 | 129 | 3 | 11 | 207 | 92 | 329 | 5.47e-19 | 87.8 |
MS.gene32856.t1 | AT5G47620 | 44.737 | 152 | 60 | 3 | 69 | 207 | 5 | 145 | 3.60e-30 | 119 |
MS.gene32856.t1 | AT5G47620 | 34.043 | 94 | 59 | 2 | 7 | 99 | 43 | 134 | 3.55e-12 | 67.4 |
MS.gene32856.t1 | AT5G50250 | 29.843 | 191 | 116 | 4 | 8 | 195 | 111 | 286 | 4.21e-18 | 84.0 |
MS.gene32856.t1 | AT3G15010 | 26.154 | 195 | 127 | 5 | 1 | 193 | 64 | 243 | 4.89e-17 | 82.4 |
MS.gene32856.t1 | AT3G15010 | 26.154 | 195 | 127 | 5 | 1 | 193 | 64 | 243 | 4.89e-17 | 82.4 |
MS.gene32856.t1 | AT4G24770 | 28.934 | 197 | 122 | 4 | 2 | 195 | 142 | 323 | 2.32e-16 | 79.7 |
MS.gene32856.t1 | AT4G24770 | 28.934 | 197 | 122 | 4 | 2 | 195 | 142 | 323 | 2.32e-16 | 79.7 |
MS.gene32856.t1 | AT3G52380 | 31.892 | 185 | 110 | 6 | 8 | 188 | 114 | 286 | 1.99e-14 | 73.9 |
MS.gene32856.t1 | AT3G54770 | 34.513 | 113 | 68 | 2 | 6 | 112 | 13 | 125 | 1.03e-13 | 70.9 |
MS.gene32856.t1 | AT3G54770 | 34.513 | 113 | 68 | 2 | 6 | 112 | 13 | 125 | 1.18e-13 | 70.9 |
MS.gene32856.t1 | AT3G23830 | 44.444 | 81 | 43 | 1 | 10 | 88 | 35 | 115 | 5.06e-13 | 66.2 |
MS.gene32856.t1 | AT3G23830 | 39.506 | 81 | 48 | 1 | 116 | 195 | 34 | 114 | 3.79e-12 | 63.5 |
MS.gene32856.t1 | AT3G23830 | 44.444 | 81 | 43 | 1 | 10 | 88 | 35 | 115 | 5.06e-13 | 66.2 |
MS.gene32856.t1 | AT3G23830 | 39.506 | 81 | 48 | 1 | 116 | 195 | 34 | 114 | 3.79e-12 | 63.5 |
MS.gene32856.t1 | AT1G76460 | 40.000 | 80 | 47 | 1 | 6 | 84 | 20 | 99 | 8.52e-13 | 68.6 |
MS.gene32856.t1 | AT1G03457 | 27.513 | 189 | 122 | 5 | 6 | 194 | 8 | 181 | 1.09e-12 | 69.3 |
MS.gene32856.t1 | AT1G20880 | 41.250 | 80 | 46 | 1 | 6 | 84 | 20 | 99 | 1.69e-12 | 67.4 |
MS.gene32856.t1 | AT1G20880 | 41.250 | 80 | 46 | 1 | 6 | 84 | 20 | 99 | 1.69e-12 | 67.4 |
MS.gene32856.t1 | AT1G20880 | 41.250 | 80 | 46 | 1 | 6 | 84 | 20 | 99 | 1.69e-12 | 67.4 |
MS.gene32856.t1 | AT2G37220 | 28.646 | 192 | 130 | 4 | 11 | 195 | 92 | 283 | 1.80e-12 | 67.8 |
MS.gene32856.t1 | AT5G61030 | 43.210 | 81 | 44 | 1 | 10 | 88 | 40 | 120 | 1.99e-12 | 67.8 |
MS.gene32856.t1 | AT5G61030 | 43.210 | 81 | 44 | 1 | 10 | 88 | 40 | 120 | 1.99e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT3G56860 | 22.751 | 189 | 142 | 3 | 11 | 197 | 141 | 327 | 3.91e-12 | 67.8 |
MS.gene32856.t1 | AT5G53720 | 41.026 | 78 | 46 | 0 | 115 | 192 | 7 | 84 | 6.12e-12 | 62.0 |
MS.gene32856.t1 | AT3G16380 | 25.843 | 267 | 165 | 11 | 6 | 265 | 198 | 438 | 6.86e-12 | 67.0 |
MS.gene32856.t1 | AT1G01080 | 29.082 | 196 | 125 | 5 | 10 | 202 | 108 | 292 | 9.18e-12 | 65.5 |
MS.gene32856.t1 | AT1G03457 | 26.455 | 189 | 115 | 4 | 6 | 194 | 8 | 172 | 1.05e-11 | 66.2 |
MS.gene32856.t1 | AT2G16940 | 27.957 | 186 | 126 | 4 | 6 | 189 | 37 | 216 | 1.32e-11 | 65.9 |
MS.gene32856.t1 | AT2G16940 | 27.957 | 186 | 126 | 4 | 6 | 189 | 37 | 216 | 1.32e-11 | 65.9 |
MS.gene32856.t1 | AT1G71770 | 26.407 | 231 | 139 | 10 | 12 | 226 | 241 | 456 | 1.33e-11 | 66.6 |
MS.gene32856.t1 | AT1G71770 | 26.407 | 231 | 139 | 10 | 12 | 226 | 241 | 456 | 1.33e-11 | 66.6 |
MS.gene32856.t1 | AT1G60650 | 36.607 | 112 | 69 | 2 | 9 | 118 | 11 | 122 | 2.10e-11 | 64.7 |
MS.gene32856.t1 | AT1G60650 | 36.607 | 112 | 69 | 2 | 9 | 118 | 11 | 122 | 2.10e-11 | 64.7 |
MS.gene32856.t1 | AT4G34110 | 24.812 | 266 | 158 | 11 | 12 | 262 | 217 | 455 | 3.72e-11 | 65.1 |
MS.gene32856.t1 | AT4G34110 | 21.296 | 216 | 145 | 6 | 12 | 224 | 126 | 319 | 9.92e-11 | 63.5 |
MS.gene32856.t1 | AT2G41060 | 22.951 | 183 | 131 | 2 | 11 | 192 | 129 | 302 | 4.12e-11 | 64.7 |
MS.gene32856.t1 | AT2G41060 | 22.951 | 183 | 131 | 2 | 11 | 192 | 129 | 302 | 4.12e-11 | 64.7 |
MS.gene32856.t1 | AT2G41060 | 22.951 | 183 | 131 | 2 | 11 | 192 | 129 | 302 | 4.12e-11 | 64.7 |
MS.gene32856.t1 | AT4G16280 | 26.230 | 183 | 104 | 4 | 7 | 184 | 42 | 198 | 4.85e-11 | 64.7 |
MS.gene32856.t1 | AT1G22910 | 36.250 | 80 | 50 | 1 | 6 | 84 | 9 | 88 | 4.96e-11 | 62.8 |
MS.gene32856.t1 | AT4G16280 | 26.230 | 183 | 104 | 4 | 7 | 184 | 117 | 273 | 5.00e-11 | 64.7 |
MS.gene32856.t1 | AT1G22910 | 36.250 | 80 | 50 | 1 | 6 | 84 | 9 | 88 | 5.69e-11 | 62.8 |
MS.gene32856.t1 | AT5G04280 | 40.698 | 86 | 50 | 1 | 118 | 202 | 8 | 93 | 5.99e-11 | 63.2 |
MS.gene32856.t1 | AT1G22330 | 37.500 | 80 | 49 | 1 | 6 | 84 | 13 | 92 | 7.05e-11 | 62.8 |
MS.gene32856.t1 | AT2G18510 | 24.898 | 245 | 147 | 8 | 10 | 242 | 25 | 244 | 7.08e-11 | 63.5 |
MS.gene32856.t1 | AT2G16940 | 27.957 | 186 | 126 | 4 | 6 | 189 | 227 | 406 | 8.85e-11 | 63.9 |
MS.gene32856.t1 | AT4G16280 | 28.177 | 181 | 103 | 5 | 7 | 184 | 117 | 273 | 9.07e-11 | 63.5 |
MS.gene32856.t1 | AT1G74230 | 44.737 | 76 | 41 | 1 | 10 | 84 | 34 | 109 | 9.25e-11 | 62.4 |
Find 113 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGCAAAACGTCACCGTATT+TGG | 0.184645 | 3.1:-81865383 | None:intergenic |
CAAGATACCCATCTTATTCT+TGG | 0.209187 | 3.1:+81865496 | MS.gene32856:CDS |
CGTCACCGTATTTGGTAAAA+TGG | 0.226718 | 3.1:-81865375 | None:intergenic |
TAGGTAGTGGTGCCGGAAAT+TGG | 0.271241 | 3.1:+81866410 | MS.gene32856:CDS |
CAGCTCCATCAGATGTTTAT+AGG | 0.291134 | 3.1:+81866278 | MS.gene32856:CDS |
CAGTGCCATGAATTTCAAAA+TGG | 0.298628 | 3.1:+81865285 | None:intergenic |
TGTTGTAGCTGTTCACTTCT+CGG | 0.300233 | 3.1:-81865731 | None:intergenic |
CAGATGTTTATAGGAACTTA+TGG | 0.312353 | 3.1:+81866287 | MS.gene32856:CDS |
AAAATCAATTACAGAATAGA+AGG | 0.320623 | 3.1:+81865753 | MS.gene32856:CDS |
TACGGGTGGGTATGGGTATG+GGG | 0.336881 | 3.1:+81866243 | MS.gene32856:CDS |
CCTACTAGTGATGGAGTATA+TGG | 0.341321 | 3.1:+81866187 | MS.gene32856:CDS |
GGTGGTAGTGTTGGAATAGT+AGG | 0.365653 | 3.1:+81866391 | MS.gene32856:CDS |
AGGTAGTGGTGCCGGAAATT+GGG | 0.368504 | 3.1:+81866411 | MS.gene32856:CDS |
ACTCGAATCCCTAGAGGTTT+CGG | 0.378798 | 3.1:+81865430 | MS.gene32856:CDS |
CTACGGGTGGGTATGGGTAT+GGG | 0.381893 | 3.1:+81866242 | MS.gene32856:CDS |
CCTACGGGTGGGTATGGGTA+TGG | 0.383326 | 3.1:+81866241 | MS.gene32856:CDS |
TGGTACCCTACGGGTGGGTA+TGG | 0.397098 | 3.1:+81866235 | MS.gene32856:CDS |
ATAAGATATAAGAGTGATAG+AGG | 0.401002 | 3.1:+81866094 | MS.gene32856:CDS |
AAGAGGTACTTTGAGAGGTT+TGG | 0.403952 | 3.1:+81865875 | MS.gene32856:CDS |
AATGTGGGAATGAACATATT+AGG | 0.405130 | 3.1:+81865798 | MS.gene32856:CDS |
ACAAATCCATTGACAATATG+AGG | 0.410512 | 3.1:-81866481 | None:intergenic |
GACCAGCCTCATATTGTCAA+TGG | 0.418491 | 3.1:+81866475 | MS.gene32856:CDS |
GCTGTATATAGGTAGAAGTT+AGG | 0.446414 | 3.1:+81865699 | MS.gene32856:intron |
TTACCTTTGCCTACTAGTGA+TGG | 0.454799 | 3.1:+81866178 | MS.gene32856:CDS |
AACTGATGTCGTGGTGATGC+AGG | 0.456579 | 3.1:+81865904 | MS.gene32856:CDS |
ACGGGTGGGTATGGGTATGG+GGG | 0.458994 | 3.1:+81866244 | MS.gene32856:CDS |
GTAGGCAGGTGGAGGTTAAG+AGG | 0.461437 | 3.1:+81866026 | MS.gene32856:CDS |
TATGGTGGGCAAATGGTAAC+TGG | 0.461446 | 3.1:+81866310 | MS.gene32856:CDS |
ATTTGTTGCAGACCCAAGAA+TGG | 0.463173 | 3.1:-81866443 | None:intergenic |
AGAGGGCAGTTCCGAGGGAG+GGG | 0.471408 | 3.1:+81866044 | MS.gene32856:CDS |
GAATAAGATGGGTATCTTGA+AGG | 0.478134 | 3.1:-81865492 | None:intergenic |
CTATGGTTGTTGGTACCCTA+CGG | 0.479004 | 3.1:+81866225 | MS.gene32856:CDS |
AGGGAACATGTTTCCTGCCA+TGG | 0.485899 | 3.1:+81866150 | MS.gene32856:CDS |
GGTACCCTACGGGTGGGTAT+GGG | 0.489172 | 3.1:+81866236 | MS.gene32856:CDS |
TCATGACTTGAATGGTAGGC+AGG | 0.489984 | 3.1:+81866012 | MS.gene32856:CDS |
AGTTTAAGAGGTACTTTGAG+AGG | 0.492503 | 3.1:+81865870 | MS.gene32856:CDS |
CTTATGGTATGGTGGGCAAA+TGG | 0.494724 | 3.1:+81866303 | MS.gene32856:CDS |
TGGTCCTCAGGCTTATCATC+AGG | 0.495120 | 3.1:+81866330 | MS.gene32856:CDS |
GTAACGAAACCGAAACCTCT+AGG | 0.497010 | 3.1:-81865439 | None:intergenic |
GGTTAAGAGGGCAGTTCCGA+GGG | 0.504393 | 3.1:+81866039 | MS.gene32856:CDS |
GGTAGTGGTGCCGGAAATTG+GGG | 0.509354 | 3.1:+81866412 | MS.gene32856:CDS |
CCATCTTATTCTTGGACGAA+AGG | 0.510048 | 3.1:+81865504 | MS.gene32856:CDS |
GCTATAGTGGTTACGAATGT+GGG | 0.511670 | 3.1:+81865783 | MS.gene32856:CDS |
TGTCTGTGGAAGAGTTTAAG+AGG | 0.514084 | 3.1:+81865858 | MS.gene32856:CDS |
TTCAATATGCCATCGCCTCA+TGG | 0.514604 | 3.1:+81866508 | MS.gene32856:CDS |
CCTTTCGTCCAAGAATAAGA+TGG | 0.515929 | 3.1:-81865504 | None:intergenic |
CGTAGGGTACCAACAACCAT+AGG | 0.517439 | 3.1:-81866224 | None:intergenic |
CATGGTGTAAAGCAGATTGT+TGG | 0.518341 | 3.1:+81866526 | MS.gene32856:CDS |
TGAGGCGATGGCATATTGAA+TGG | 0.519793 | 3.1:-81866505 | None:intergenic |
GCAAATGGTAACTGGTCCTC+AGG | 0.523351 | 3.1:+81866318 | MS.gene32856:CDS |
GATCAAATCCCTATGGTTGT+TGG | 0.523642 | 3.1:+81866215 | MS.gene32856:CDS |
TCTTCCACAGACATATTAGT+AGG | 0.524280 | 3.1:-81865848 | None:intergenic |
CCATATACTCCATCACTAGT+AGG | 0.526921 | 3.1:-81866187 | None:intergenic |
AGCTATAGTGGTTACGAATG+TGG | 0.527900 | 3.1:+81865782 | MS.gene32856:CDS |
GAATCAACATTCCCCTCCCT+CGG | 0.539260 | 3.1:-81866055 | None:intergenic |
CGGGTGGGTATGGGTATGGG+GGG | 0.541423 | 3.1:+81866245 | MS.gene32856:CDS |
TAGGCAGGTGGAGGTTAAGA+GGG | 0.544226 | 3.1:+81866027 | MS.gene32856:CDS |
AATAAGATGGGTATCTTGAA+GGG | 0.544817 | 3.1:-81865491 | None:intergenic |
TATAGGAACTTATGGTATGG+TGG | 0.545556 | 3.1:+81866295 | MS.gene32856:CDS |
ATGGCAGGAAACATGTTCCC+TGG | 0.546559 | 3.1:-81866148 | None:intergenic |
ACATGTTCCCTGGACTAGAA+TGG | 0.547477 | 3.1:-81866138 | None:intergenic |
AAGTTCCTATAAACATCTGA+TGG | 0.548675 | 3.1:-81866283 | None:intergenic |
GAGGGGAATGTTGATTCTGA+GGG | 0.551220 | 3.1:+81866061 | MS.gene32856:CDS |
ATAGGAACTTATGGTATGGT+GGG | 0.551798 | 3.1:+81866296 | MS.gene32856:CDS |
ATCCATTGACAATATGAGGC+TGG | 0.552395 | 3.1:-81866477 | None:intergenic |
GTTTATAGGAACTTATGGTA+TGG | 0.554821 | 3.1:+81866292 | MS.gene32856:CDS |
CTTTCGTCCAAGAATAAGAT+GGG | 0.555266 | 3.1:-81865503 | None:intergenic |
AAAGGTAAAGGAGCCATGGC+AGG | 0.555428 | 3.1:-81866163 | None:intergenic |
AATGCCACCGACGAAGAGCT+TGG | 0.555484 | 3.1:-81865320 | None:intergenic |
TATGGTTGTTGGTACCCTAC+GGG | 0.556496 | 3.1:+81866226 | MS.gene32856:CDS |
AGTGATGGAGTATATGGATA+CGG | 0.560073 | 3.1:+81866193 | MS.gene32856:CDS |
AGGCAAAGGTAAAGGAGCCA+TGG | 0.560567 | 3.1:-81866167 | None:intergenic |
TCACTAGTAGGCAAAGGTAA+AGG | 0.562957 | 3.1:-81866175 | None:intergenic |
TGCTTTACACCATGAGGCGA+TGG | 0.564045 | 3.1:-81866517 | None:intergenic |
AAGAGGGCAGTTCCGAGGGA+GGG | 0.564061 | 3.1:+81866043 | MS.gene32856:CDS |
CTTGAATGGTAGGCAGGTGG+AGG | 0.564078 | 3.1:+81866018 | MS.gene32856:CDS |
AAATCAATTACAGAATAGAA+GGG | 0.576562 | 3.1:+81865754 | MS.gene32856:CDS |
TAAGAGGGCAGTTCCGAGGG+AGG | 0.576798 | 3.1:+81866042 | MS.gene32856:CDS |
GGAGGGGAATGTTGATTCTG+AGG | 0.578456 | 3.1:+81866060 | MS.gene32856:CDS |
ATAGTGTAACTCATAGGCCG+AGG | 0.580477 | 3.1:+81865927 | MS.gene32856:CDS |
ATGTCAAGTGTTGTATATGT+AGG | 0.581727 | 3.1:+81866370 | MS.gene32856:CDS |
TAACGAAACCGAAACCTCTA+GGG | 0.582846 | 3.1:-81865438 | None:intergenic |
GGTTGTTGGTACCCTACGGG+TGG | 0.587178 | 3.1:+81866229 | MS.gene32856:CDS |
GGAATAGTAGGTAGTGGTGC+CGG | 0.589920 | 3.1:+81866403 | MS.gene32856:CDS |
AGGTTAAGAGGGCAGTTCCG+AGG | 0.593306 | 3.1:+81866038 | MS.gene32856:CDS |
AATCAATTACAGAATAGAAG+GGG | 0.594063 | 3.1:+81865755 | MS.gene32856:CDS |
GATAAAGCCAAGCTCTTCGT+CGG | 0.601660 | 3.1:+81865313 | MS.gene32856:CDS |
TGCAGGATAGTGTAACTCAT+AGG | 0.602760 | 3.1:+81865921 | MS.gene32856:CDS |
TAGTGTAACTCATAGGCCGA+GGG | 0.612340 | 3.1:+81865928 | MS.gene32856:CDS |
GGATACGGATCAAATCCCTA+TGG | 0.612447 | 3.1:+81866208 | MS.gene32856:CDS |
CTTGACATAACATTAGCGTA+AGG | 0.614433 | 3.1:-81866355 | None:intergenic |
GTAGGGTACCAACAACCATA+GGG | 0.623021 | 3.1:-81866223 | None:intergenic |
GTATATGTAGGTGGTAGTGT+TGG | 0.626577 | 3.1:+81866382 | MS.gene32856:CDS |
GTTGTTGGTACCCTACGGGT+GGG | 0.634108 | 3.1:+81866230 | MS.gene32856:CDS |
ACTCCATCACTAGTAGGCAA+AGG | 0.634270 | 3.1:-81866181 | None:intergenic |
CCATACCCATACCCACCCGT+AGG | 0.634708 | 3.1:-81866241 | None:intergenic |
TGACTTGAATGGTAGGCAGG+TGG | 0.636473 | 3.1:+81866015 | MS.gene32856:CDS |
CTCTAGGGATTCGAGTGGTG+CGG | 0.637732 | 3.1:-81865423 | None:intergenic |
CATACCCATACCCACCCGTA+GGG | 0.641911 | 3.1:-81866240 | None:intergenic |
CGCACCACTCGAATCCCTAG+AGG | 0.642133 | 3.1:+81865424 | MS.gene32856:CDS |
TTTACCTACTAATATGTCTG+TGG | 0.643857 | 3.1:+81865844 | MS.gene32856:CDS |
AGTGTTGGAATAGTAGGTAG+TGG | 0.645738 | 3.1:+81866397 | MS.gene32856:CDS |
AAAGCCAAGCTCTTCGTCGG+TGG | 0.645926 | 3.1:+81865316 | MS.gene32856:CDS |
ATCAATTACAGAATAGAAGG+GGG | 0.646771 | 3.1:+81865756 | MS.gene32856:CDS |
TGGTCGAATAACTGATGTCG+TGG | 0.654008 | 3.1:+81865895 | MS.gene32856:CDS |
ATATAAGAGTGATAGAGGAG+CGG | 0.665022 | 3.1:+81866099 | MS.gene32856:CDS |
TCAAGTGTTGTATATGTAGG+TGG | 0.672547 | 3.1:+81866373 | MS.gene32856:CDS |
ACAATCTGCTTTACACCATG+AGG | 0.677423 | 3.1:-81866523 | None:intergenic |
GTGTAACTCATAGGCCGAGG+GGG | 0.683925 | 3.1:+81865930 | MS.gene32856:CDS |
GGCACCTGATGATAAGCCTG+AGG | 0.693812 | 3.1:-81866334 | None:intergenic |
AGTGTAACTCATAGGCCGAG+GGG | 0.715312 | 3.1:+81865929 | MS.gene32856:CDS |
GAAACCTCTAGGGATTCGAG+TGG | 0.734748 | 3.1:-81865428 | None:intergenic |
GTAGTGGTGCCGGAAATTGG+GGG | 0.748996 | 3.1:+81866413 | MS.gene32856:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAGTGAAAACAAAAAATTA+AGG | - | chr3.1:81865574-81865593 | None:intergenic | 15.0% |
!! | AAAATCAATTACAGAATAGA+AGG | + | chr3.1:81865753-81865772 | MS.gene32856:CDS | 20.0% |
!! | AAATCAATTACAGAATAGAA+GGG | + | chr3.1:81865754-81865773 | MS.gene32856:CDS | 20.0% |
!! | TGAAAACAAAAAATTAAGGA+AGG | - | chr3.1:81865570-81865589 | None:intergenic | 20.0% |
! | AATCAATTACAGAATAGAAG+GGG | + | chr3.1:81865755-81865774 | MS.gene32856:CDS | 25.0% |
! | ATAAGATATAAGAGTGATAG+AGG | + | chr3.1:81866094-81866113 | MS.gene32856:CDS | 25.0% |
! | ATGAAACAAAGAAATGAAGA+AGG | - | chr3.1:81865541-81865560 | None:intergenic | 25.0% |
! | GTAAATTGTGTTTGTTTGAT+TGG | + | chr3.1:81865666-81865685 | MS.gene32856:intron | 25.0% |
!! | AAACACCATTTTACCAAATA+CGG | + | chr3.1:81865370-81865389 | MS.gene32856:CDS | 25.0% |
AAGTTCCTATAAACATCTGA+TGG | - | chr3.1:81866286-81866305 | None:intergenic | 30.0% | |
AATAAGATGGGTATCTTGAA+GGG | - | chr3.1:81865494-81865513 | None:intergenic | 30.0% | |
AATGTGGGAATGAACATATT+AGG | + | chr3.1:81865798-81865817 | MS.gene32856:CDS | 30.0% | |
ACAAATCCATTGACAATATG+AGG | - | chr3.1:81866484-81866503 | None:intergenic | 30.0% | |
ATCAATTACAGAATAGAAGG+GGG | + | chr3.1:81865756-81865775 | MS.gene32856:CDS | 30.0% | |
CAGATGTTTATAGGAACTTA+TGG | + | chr3.1:81866287-81866306 | MS.gene32856:CDS | 30.0% | |
GTTTATAGGAACTTATGGTA+TGG | + | chr3.1:81866292-81866311 | MS.gene32856:CDS | 30.0% | |
TTTACCTACTAATATGTCTG+TGG | + | chr3.1:81865844-81865863 | MS.gene32856:CDS | 30.0% | |
! | ACAAGTTTTCATGACTTGAA+TGG | + | chr3.1:81866004-81866023 | MS.gene32856:CDS | 30.0% |
! | ACTAAGAAGATTTTTGTTGG+TGG | + | chr3.1:81865821-81865840 | MS.gene32856:CDS | 30.0% |
! | AGGACTAAGAAGATTTTTGT+TGG | + | chr3.1:81865818-81865837 | MS.gene32856:CDS | 30.0% |
! | ATGTCAAGTGTTGTATATGT+AGG | + | chr3.1:81866370-81866389 | MS.gene32856:CDS | 30.0% |
!! | TACTTTTGATTCTGAAGACT+CGG | + | chr3.1:81865964-81865983 | MS.gene32856:CDS | 30.0% |
!! | TGTTTGTTTGATTGGTTTCA+TGG | + | chr3.1:81865674-81865693 | MS.gene32856:intron | 30.0% |
!!! | TCAAGTTTTAAAGGAAGCAA+TGG | + | chr3.1:81866553-81866572 | MS.gene32856:CDS | 30.0% |
ATAGGAACTTATGGTATGGT+GGG | + | chr3.1:81866296-81866315 | MS.gene32856:CDS | 35.0% | |
ATATAAGAGTGATAGAGGAG+CGG | + | chr3.1:81866099-81866118 | MS.gene32856:CDS | 35.0% | |
CAAGATACCCATCTTATTCT+TGG | + | chr3.1:81865496-81865515 | MS.gene32856:CDS | 35.0% | |
CTTGACATAACATTAGCGTA+AGG | - | chr3.1:81866358-81866377 | None:intergenic | 35.0% | |
CTTTCGTCCAAGAATAAGAT+GGG | - | chr3.1:81865506-81865525 | None:intergenic | 35.0% | |
GAATAAGATGGGTATCTTGA+AGG | - | chr3.1:81865495-81865514 | None:intergenic | 35.0% | |
GCTGTATATAGGTAGAAGTT+AGG | + | chr3.1:81865699-81865718 | MS.gene32856:intron | 35.0% | |
GTTTCATGGTTGCTGTATAT+AGG | + | chr3.1:81865688-81865707 | MS.gene32856:intron | 35.0% | |
TATAGGAACTTATGGTATGG+TGG | + | chr3.1:81866295-81866314 | MS.gene32856:CDS | 35.0% | |
TCTTCCACAGACATATTAGT+AGG | - | chr3.1:81865851-81865870 | None:intergenic | 35.0% | |
TTATTCTTGGACGAAAGGTT+CGG | + | chr3.1:81865509-81865528 | MS.gene32856:intron | 35.0% | |
! | AGTGATGGAGTATATGGATA+CGG | + | chr3.1:81866193-81866212 | MS.gene32856:CDS | 35.0% |
! | GTTTTCATGACTTGAATGGT+AGG | + | chr3.1:81866008-81866027 | MS.gene32856:CDS | 35.0% |
! | TCAAGTGTTGTATATGTAGG+TGG | + | chr3.1:81866373-81866392 | MS.gene32856:CDS | 35.0% |
!! | AGTTTAAGAGGTACTTTGAG+AGG | + | chr3.1:81865870-81865889 | MS.gene32856:CDS | 35.0% |
ACAATCTGCTTTACACCATG+AGG | - | chr3.1:81866526-81866545 | None:intergenic | 40.0% | |
AGCTATAGTGGTTACGAATG+TGG | + | chr3.1:81865782-81865801 | MS.gene32856:CDS | 40.0% | |
ATCCATTGACAATATGAGGC+TGG | - | chr3.1:81866480-81866499 | None:intergenic | 40.0% | |
ATGCAAAACGTCACCGTATT+TGG | - | chr3.1:81865386-81865405 | None:intergenic | 40.0% | |
CAGCTCCATCAGATGTTTAT+AGG | + | chr3.1:81866278-81866297 | MS.gene32856:CDS | 40.0% | |
CATGGTGTAAAGCAGATTGT+TGG | + | chr3.1:81866526-81866545 | MS.gene32856:CDS | 40.0% | |
CCATATACTCCATCACTAGT+AGG | - | chr3.1:81866190-81866209 | None:intergenic | 40.0% | |
CCATCTTATTCTTGGACGAA+AGG | + | chr3.1:81865504-81865523 | MS.gene32856:CDS | 40.0% | |
CCTTTCGTCCAAGAATAAGA+TGG | - | chr3.1:81865507-81865526 | None:intergenic | 40.0% | |
CGTCACCGTATTTGGTAAAA+TGG | - | chr3.1:81865378-81865397 | None:intergenic | 40.0% | |
GATCAAATCCCTATGGTTGT+TGG | + | chr3.1:81866215-81866234 | MS.gene32856:CDS | 40.0% | |
GCTATAGTGGTTACGAATGT+GGG | + | chr3.1:81865783-81865802 | MS.gene32856:CDS | 40.0% | |
TAACGAAACCGAAACCTCTA+GGG | - | chr3.1:81865441-81865460 | None:intergenic | 40.0% | |
TCACTAGTAGGCAAAGGTAA+AGG | - | chr3.1:81866178-81866197 | None:intergenic | 40.0% | |
TGCAGGATAGTGTAACTCAT+AGG | + | chr3.1:81865921-81865940 | MS.gene32856:CDS | 40.0% | |
TGTCTGTGGAAGAGTTTAAG+AGG | + | chr3.1:81865858-81865877 | MS.gene32856:CDS | 40.0% | |
TGTTGTAGCTGTTCACTTCT+CGG | - | chr3.1:81865734-81865753 | None:intergenic | 40.0% | |
TTACCTTTGCCTACTAGTGA+TGG | + | chr3.1:81866178-81866197 | MS.gene32856:CDS | 40.0% | |
! | AGTGTTGGAATAGTAGGTAG+TGG | + | chr3.1:81866397-81866416 | MS.gene32856:CDS | 40.0% |
! | AGTTTTCACCATTCTAGTCC+AGG | + | chr3.1:81866130-81866149 | MS.gene32856:CDS | 40.0% |
! | ATTTGTTGCAGACCCAAGAA+TGG | - | chr3.1:81866446-81866465 | None:intergenic | 40.0% |
! | CCTACTAGTGATGGAGTATA+TGG | + | chr3.1:81866187-81866206 | MS.gene32856:CDS | 40.0% |
! | GTATATGTAGGTGGTAGTGT+TGG | + | chr3.1:81866382-81866401 | MS.gene32856:CDS | 40.0% |
! | GTTTTCACCATTCTAGTCCA+GGG | + | chr3.1:81866131-81866150 | MS.gene32856:CDS | 40.0% |
!! | AAGAGGTACTTTGAGAGGTT+TGG | + | chr3.1:81865875-81865894 | MS.gene32856:CDS | 40.0% |
!! | GTTGGCGCTTCAAGTTTTAA+AGG | + | chr3.1:81866544-81866563 | MS.gene32856:CDS | 40.0% |
ACTCCATCACTAGTAGGCAA+AGG | - | chr3.1:81866184-81866203 | None:intergenic | 45.0% | |
ACTCGAATCCCTAGAGGTTT+CGG | + | chr3.1:81865430-81865449 | MS.gene32856:CDS | 45.0% | |
AGAAGGGGGAATAGCTATAG+TGG | + | chr3.1:81865770-81865789 | MS.gene32856:CDS | 45.0% | |
ATAGTGTAACTCATAGGCCG+AGG | + | chr3.1:81865927-81865946 | MS.gene32856:CDS | 45.0% | |
CTATGGTTGTTGGTACCCTA+CGG | + | chr3.1:81866225-81866244 | MS.gene32856:CDS | 45.0% | |
GACCAGCCTCATATTGTCAA+TGG | + | chr3.1:81866475-81866494 | MS.gene32856:CDS | 45.0% | |
GATAAAGCCAAGCTCTTCGT+CGG | + | chr3.1:81865313-81865332 | MS.gene32856:CDS | 45.0% | |
GGAATTGTACCCCCAATTTC+CGG | - | chr3.1:81866425-81866444 | None:intergenic | 45.0% | |
GGATACGGATCAAATCCCTA+TGG | + | chr3.1:81866208-81866227 | MS.gene32856:CDS | 45.0% | |
GTAACGAAACCGAAACCTCT+AGG | - | chr3.1:81865442-81865461 | None:intergenic | 45.0% | |
GTAATAAACCCAAACCCCCT+CGG | - | chr3.1:81865947-81865966 | None:intergenic | 45.0% | |
TAGTGTAACTCATAGGCCGA+GGG | + | chr3.1:81865928-81865947 | MS.gene32856:CDS | 45.0% | |
TATGGTTGTTGGTACCCTAC+GGG | + | chr3.1:81866226-81866245 | MS.gene32856:CDS | 45.0% | |
TCATGACTTGAATGGTAGGC+AGG | + | chr3.1:81866012-81866031 | MS.gene32856:CDS | 45.0% | |
TGAGGCGATGGCATATTGAA+TGG | - | chr3.1:81866508-81866527 | None:intergenic | 45.0% | |
TGGTCGAATAACTGATGTCG+TGG | + | chr3.1:81865895-81865914 | MS.gene32856:CDS | 45.0% | |
TTCAATATGCCATCGCCTCA+TGG | + | chr3.1:81866508-81866527 | MS.gene32856:CDS | 45.0% | |
! | ACATGTTCCCTGGACTAGAA+TGG | - | chr3.1:81866141-81866160 | None:intergenic | 45.0% |
! | GGGGGTACAATTCCATTCTT+GGG | + | chr3.1:81866431-81866450 | MS.gene32856:CDS | 45.0% |
! | GGTGGTAGTGTTGGAATAGT+AGG | + | chr3.1:81866391-81866410 | MS.gene32856:CDS | 45.0% |
! | GTAGGGTACCAACAACCATA+GGG | - | chr3.1:81866226-81866245 | None:intergenic | 45.0% |
! | TGGGGGTACAATTCCATTCT+TGG | + | chr3.1:81866430-81866449 | MS.gene32856:CDS | 45.0% |
!! | CTTATGGTATGGTGGGCAAA+TGG | + | chr3.1:81866303-81866322 | MS.gene32856:CDS | 45.0% |
!! | GAGGGGAATGTTGATTCTGA+GGG | + | chr3.1:81866061-81866080 | MS.gene32856:CDS | 45.0% |
!! | TATGGTGGGCAAATGGTAAC+TGG | + | chr3.1:81866310-81866329 | MS.gene32856:CDS | 45.0% |
AAAGGTAAAGGAGCCATGGC+AGG | - | chr3.1:81866166-81866185 | None:intergenic | 50.0% | |
AGGCAAAGGTAAAGGAGCCA+TGG | - | chr3.1:81866170-81866189 | None:intergenic | 50.0% | |
AGGGAACATGTTTCCTGCCA+TGG | + | chr3.1:81866150-81866169 | MS.gene32856:CDS | 50.0% | |
AGTGTAACTCATAGGCCGAG+GGG | + | chr3.1:81865929-81865948 | MS.gene32856:CDS | 50.0% | |
ATGGCAGGAAACATGTTCCC+TGG | - | chr3.1:81866151-81866170 | None:intergenic | 50.0% | |
GAATCAACATTCCCCTCCCT+CGG | - | chr3.1:81866058-81866077 | None:intergenic | 50.0% | |
GCAAATGGTAACTGGTCCTC+AGG | + | chr3.1:81866318-81866337 | MS.gene32856:CDS | 50.0% | |
TAGGCAGGTGGAGGTTAAGA+GGG | + | chr3.1:81866027-81866046 | MS.gene32856:CDS | 50.0% | |
TGACTTGAATGGTAGGCAGG+TGG | + | chr3.1:81866015-81866034 | MS.gene32856:CDS | 50.0% | |
TGCTTTACACCATGAGGCGA+TGG | - | chr3.1:81866520-81866539 | None:intergenic | 50.0% | |
TGGTCCTCAGGCTTATCATC+AGG | + | chr3.1:81866330-81866349 | MS.gene32856:CDS | 50.0% | |
! | AACTGATGTCGTGGTGATGC+AGG | + | chr3.1:81865904-81865923 | MS.gene32856:CDS | 50.0% |
! | AGGTAGTGGTGCCGGAAATT+GGG | + | chr3.1:81866411-81866430 | MS.gene32856:CDS | 50.0% |
! | CGTAGGGTACCAACAACCAT+AGG | - | chr3.1:81866227-81866246 | None:intergenic | 50.0% |
! | GAAACCTCTAGGGATTCGAG+TGG | - | chr3.1:81865431-81865450 | None:intergenic | 50.0% |
! | GGAATAGTAGGTAGTGGTGC+CGG | + | chr3.1:81866403-81866422 | MS.gene32856:CDS | 50.0% |
! | TAGGTAGTGGTGCCGGAAAT+TGG | + | chr3.1:81866410-81866429 | MS.gene32856:CDS | 50.0% |
!! | GGAGGGGAATGTTGATTCTG+AGG | + | chr3.1:81866060-81866079 | MS.gene32856:CDS | 50.0% |
AAAGCCAAGCTCTTCGTCGG+TGG | + | chr3.1:81865316-81865335 | MS.gene32856:CDS | 55.0% | |
AATGCCACCGACGAAGAGCT+TGG | - | chr3.1:81865323-81865342 | None:intergenic | 55.0% | |
AGGTTAAGAGGGCAGTTCCG+AGG | + | chr3.1:81866038-81866057 | MS.gene32856:CDS | 55.0% | |
CATACCCATACCCACCCGTA+GGG | - | chr3.1:81866243-81866262 | None:intergenic | 55.0% | |
CTACGGGTGGGTATGGGTAT+GGG | + | chr3.1:81866242-81866261 | MS.gene32856:CDS | 55.0% | |
CTTGAATGGTAGGCAGGTGG+AGG | + | chr3.1:81866018-81866037 | MS.gene32856:CDS | 55.0% | |
GGCACCTGATGATAAGCCTG+AGG | - | chr3.1:81866337-81866356 | None:intergenic | 55.0% | |
GGTTAAGAGGGCAGTTCCGA+GGG | + | chr3.1:81866039-81866058 | MS.gene32856:CDS | 55.0% | |
GTAGGCAGGTGGAGGTTAAG+AGG | + | chr3.1:81866026-81866045 | MS.gene32856:CDS | 55.0% | |
GTGTAACTCATAGGCCGAGG+GGG | + | chr3.1:81865930-81865949 | MS.gene32856:CDS | 55.0% | |
GTTGTTGGTACCCTACGGGT+GGG | + | chr3.1:81866230-81866249 | MS.gene32856:CDS | 55.0% | |
TACGGGTGGGTATGGGTATG+GGG | + | chr3.1:81866243-81866262 | MS.gene32856:CDS | 55.0% | |
! | CTCTAGGGATTCGAGTGGTG+CGG | - | chr3.1:81865426-81865445 | None:intergenic | 55.0% |
! | GGTAGTGGTGCCGGAAATTG+GGG | + | chr3.1:81866412-81866431 | MS.gene32856:CDS | 55.0% |
! | GTAGTGGTGCCGGAAATTGG+GGG | + | chr3.1:81866413-81866432 | MS.gene32856:CDS | 55.0% |
AAGAGGGCAGTTCCGAGGGA+GGG | + | chr3.1:81866043-81866062 | MS.gene32856:CDS | 60.0% | |
ACGGGTGGGTATGGGTATGG+GGG | + | chr3.1:81866244-81866263 | MS.gene32856:CDS | 60.0% | |
ACTCATAGGCCGAGGGGGTT+TGG | + | chr3.1:81865935-81865954 | MS.gene32856:CDS | 60.0% | |
CCATACCCATACCCACCCGT+AGG | - | chr3.1:81866244-81866263 | None:intergenic | 60.0% | |
CCTACGGGTGGGTATGGGTA+TGG | + | chr3.1:81866241-81866260 | MS.gene32856:CDS | 60.0% | |
CGCACCACTCGAATCCCTAG+AGG | + | chr3.1:81865424-81865443 | MS.gene32856:CDS | 60.0% | |
CTCATAGGCCGAGGGGGTTT+GGG | + | chr3.1:81865936-81865955 | MS.gene32856:CDS | 60.0% | |
GGGTATGGGTATGGGGGGAA+TGG | + | chr3.1:81866250-81866269 | MS.gene32856:CDS | 60.0% | |
GGTACCCTACGGGTGGGTAT+GGG | + | chr3.1:81866236-81866255 | MS.gene32856:CDS | 60.0% | |
GGTTGTTGGTACCCTACGGG+TGG | + | chr3.1:81866229-81866248 | MS.gene32856:CDS | 60.0% | |
TAAGAGGGCAGTTCCGAGGG+AGG | + | chr3.1:81866042-81866061 | MS.gene32856:CDS | 60.0% | |
TGGTACCCTACGGGTGGGTA+TGG | + | chr3.1:81866235-81866254 | MS.gene32856:CDS | 60.0% | |
AGAGGGCAGTTCCGAGGGAG+GGG | + | chr3.1:81866044-81866063 | MS.gene32856:CDS | 65.0% | |
CGGGTGGGTATGGGTATGGG+GGG | + | chr3.1:81866245-81866264 | MS.gene32856:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 81865292 | 81866591 | 81865292 | ID=MS.gene32856 |
chr3.1 | mRNA | 81865292 | 81866591 | 81865292 | ID=MS.gene32856.t1;Parent=MS.gene32856 |
chr3.1 | exon | 81865292 | 81865525 | 81865292 | ID=MS.gene32856.t1.exon1;Parent=MS.gene32856.t1 |
chr3.1 | CDS | 81865292 | 81865525 | 81865292 | ID=cds.MS.gene32856.t1;Parent=MS.gene32856.t1 |
chr3.1 | exon | 81865710 | 81866591 | 81865710 | ID=MS.gene32856.t1.exon2;Parent=MS.gene32856.t1 |
chr3.1 | CDS | 81865710 | 81866591 | 81865710 | ID=cds.MS.gene32856.t1;Parent=MS.gene32856.t1 |
Gene Sequence |
Protein sequence |