AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33055

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33055.t1 MTR_1g015110 96.958 526 16 0 1 526 28 553 0.0 1047
MS.gene33055.t1 MTR_3g104710 67.293 532 160 4 1 526 26 549 0.0 694
MS.gene33055.t1 MTR_2g040500 52.523 436 158 7 115 526 135 545 6.21e-151 443
MS.gene33055.t1 MTR_4g125810 57.754 374 138 5 156 526 157 513 1.40e-143 423
MS.gene33055.t1 MTR_8g102550 51.456 309 132 7 213 521 103 393 5.91e-90 281
MS.gene33055.t1 MTR_3g068200 42.730 337 142 7 205 526 85 385 1.38e-78 251
MS.gene33055.t1 MTR_5g009370 46.602 309 135 6 210 516 50 330 4.34e-76 243
MS.gene33055.t1 MTR_1g028300 49.045 314 122 7 205 517 104 380 5.77e-75 242
MS.gene33055.t1 MTR_5g080680 44.194 310 120 6 210 503 99 371 5.59e-70 229
MS.gene33055.t1 MTR_1g014640 36.093 302 135 7 213 514 78 321 7.97e-47 166
MS.gene33055.t1 MTR_1g013400 36.093 302 135 7 213 514 78 321 7.97e-47 166
MS.gene33055.t1 MTR_3g105730 36.424 302 134 7 213 514 35 278 2.00e-46 164
MS.gene33055.t1 MTR_5g080680 43.578 218 80 4 210 417 99 283 3.21e-46 163
MS.gene33055.t1 MTR_3g105730 36.424 302 134 7 213 514 13 256 3.26e-46 163
MS.gene33055.t1 MTR_1g115570 33.974 312 134 8 213 519 96 340 1.16e-42 155
MS.gene33055.t1 MTR_3g091060 35.484 310 140 8 214 522 96 346 4.97e-42 154
MS.gene33055.t1 MTR_3g464650 33.984 256 134 5 263 517 94 315 1.18e-36 138
MS.gene33055.t1 MTR_5g071550 33.333 273 146 6 246 517 138 375 3.34e-35 136
MS.gene33055.t1 MTR_3g464700 38.806 201 103 3 263 462 118 299 8.13e-35 134
MS.gene33055.t1 MTR_4g123080 30.627 271 154 7 258 522 90 332 6.30e-33 129
MS.gene33055.t1 MTR_4g123080 30.627 271 154 7 258 522 108 350 6.68e-33 129
MS.gene33055.t1 MTR_4g094208 34.815 270 122 9 256 517 54 277 1.77e-32 125
MS.gene33055.t1 MTR_1g050520 31.013 316 161 9 209 518 382 646 1.16e-31 129
MS.gene33055.t1 MTR_1g086350 32.394 284 146 10 258 523 113 368 2.58e-31 125
MS.gene33055.t1 MTR_1g086350 32.394 284 146 10 258 523 97 352 2.65e-31 125
MS.gene33055.t1 MTR_5g024340 31.179 263 137 7 258 514 119 343 2.72e-30 122
MS.gene33055.t1 MTR_5g071550 36.715 207 110 4 246 451 138 324 8.50e-30 120
MS.gene33055.t1 MTR_1g086350 31.449 283 148 10 259 523 12 266 1.40e-29 118
MS.gene33055.t1 MTR_2g033000 30.566 265 150 5 258 516 95 331 2.13e-29 119
MS.gene33055.t1 MTR_4g116420 29.885 261 138 6 263 514 124 348 2.92e-29 119
MS.gene33055.t1 MTR_3g107880 29.321 324 172 11 205 519 15 290 3.98e-29 117
MS.gene33055.t1 MTR_3g107880 29.321 324 172 11 205 519 73 348 1.40e-28 117
MS.gene33055.t1 MTR_3g107880 29.321 324 172 11 205 519 72 347 1.41e-28 117
MS.gene33055.t1 MTR_3g074610 32.946 258 129 7 263 517 66 282 3.51e-28 114
MS.gene33055.t1 MTR_5g063940 34.749 259 123 8 263 517 19 235 5.20e-28 112
MS.gene33055.t1 MTR_5g063940 34.749 259 123 8 263 517 66 282 2.40e-27 111
MS.gene33055.t1 MTR_2g008850 32.593 270 128 8 256 517 12 235 6.88e-27 109
MS.gene33055.t1 MTR_3g105880 28.188 298 140 5 213 466 24 291 1.54e-26 111
MS.gene33055.t1 MTR_3g105880 28.188 298 140 5 213 466 24 291 2.26e-26 109
MS.gene33055.t1 MTR_2g078760 31.169 308 147 10 214 517 8 254 3.79e-26 107
MS.gene33055.t1 MTR_2g008850 32.593 270 128 8 256 517 58 281 6.05e-26 107
MS.gene33055.t1 MTR_4g007440 30.537 298 133 10 213 466 24 291 8.79e-26 108
MS.gene33055.t1 MTR_2g078760 31.169 308 147 10 214 517 87 333 1.28e-25 108
MS.gene33055.t1 MTR_8g463130 34.510 255 123 8 263 514 38 251 1.46e-25 105
MS.gene33055.t1 MTR_4g094542 32.157 255 128 6 263 514 150 362 1.78e-25 108
MS.gene33055.t1 MTR_8g463130 34.510 255 123 8 263 514 66 279 1.83e-25 106
MS.gene33055.t1 MTR_1g014190 28.526 312 131 10 213 471 24 296 2.48e-25 107
MS.gene33055.t1 MTR_1g014190 29.885 261 113 8 261 468 88 331 6.38e-25 107
MS.gene33055.t1 MTR_1g071370 34.529 223 91 7 341 517 226 439 1.40e-24 108
MS.gene33055.t1 MTR_3g491830 26.513 347 154 13 213 516 61 349 1.09e-22 100
MS.gene33055.t1 MTR_4g118340 25.915 328 162 12 236 517 49 341 3.04e-21 96.3
MS.gene33055.t1 MTR_3g105730 32.632 190 90 6 213 402 35 186 7.96e-21 91.7
MS.gene33055.t1 MTR_2g078760 34.715 193 103 6 263 452 117 289 4.67e-20 90.9
MS.gene33055.t1 MTR_6g081850 27.338 278 140 10 264 517 80 319 4.71e-20 91.7
MS.gene33055.t1 MTR_3g101540 30.935 278 128 11 264 521 67 300 2.33e-19 90.9
MS.gene33055.t1 MTR_2g020970 26.282 312 153 11 249 517 65 342 2.37e-19 90.1
MS.gene33055.t1 MTR_3g101540 30.935 278 128 11 264 521 67 300 2.45e-19 90.9
MS.gene33055.t1 MTR_7g070510 28.986 276 136 10 263 502 92 343 2.94e-19 90.9
MS.gene33055.t1 MTR_1g083690 33.484 221 125 8 263 461 89 309 3.44e-19 89.4
MS.gene33055.t1 MTR_2g020970 26.282 312 153 11 249 517 65 342 5.98e-19 89.7
MS.gene33055.t1 MTR_4g120410 33.333 231 122 9 263 464 91 318 1.24e-18 87.8
MS.gene33055.t1 MTR_1g110210 30.035 283 147 10 247 518 57 299 2.17e-18 86.7
MS.gene33055.t1 MTR_7g021530 29.455 275 143 10 233 461 8 277 4.61e-18 86.3
MS.gene33055.t1 MTR_1g016620 29.956 227 124 8 263 461 68 287 9.18e-18 85.1
MS.gene33055.t1 MTR_7g021530 30.165 242 128 8 261 461 86 327 1.34e-17 85.5
MS.gene33055.t1 MTR_7g021530 30.165 242 128 8 261 461 127 368 2.45e-17 85.1
MS.gene33055.t1 MTR_1g019760 29.197 274 138 10 264 521 66 299 2.85e-17 84.3
MS.gene33055.t1 MTR_1g116260 28.814 295 149 11 263 516 80 354 3.26e-17 84.0
MS.gene33055.t1 MTR_1g019760 29.197 274 138 10 264 521 66 299 4.70e-17 84.0
MS.gene33055.t1 MTR_6g087000 23.188 345 186 13 159 464 41 345 1.11e-16 84.0
MS.gene33055.t1 MTR_6g087000 23.188 345 186 13 159 464 41 345 1.35e-16 84.0
MS.gene33055.t1 MTR_2g435550 30.415 217 123 7 265 456 94 307 3.60e-16 80.5
MS.gene33055.t1 MTR_2g435550 30.137 219 121 8 265 456 80 293 4.29e-16 80.1
MS.gene33055.t1 MTR_7g080170 29.502 261 128 9 253 461 87 343 5.78e-16 80.9
MS.gene33055.t1 MTR_2g435550 30.137 219 121 8 265 456 94 307 6.07e-16 80.1
MS.gene33055.t1 MTR_1g106855 29.966 297 145 14 263 516 61 337 8.27e-16 79.7
MS.gene33055.t1 MTR_7g112430 29.520 271 135 10 264 518 69 299 1.25e-15 79.3
MS.gene33055.t1 MTR_7g112490 30.043 233 126 8 263 461 91 320 1.58e-15 79.0
MS.gene33055.t1 MTR_7g112490 30.043 233 126 8 263 461 109 338 1.64e-15 79.0
MS.gene33055.t1 MTR_8g017240 32.273 220 123 8 263 461 86 300 1.84e-15 78.6
MS.gene33055.t1 MTR_4g037470 27.869 244 135 6 256 461 98 338 2.08e-15 79.0
MS.gene33055.t1 MTR_4g037470 27.869 244 135 6 256 461 89 329 2.47e-15 79.0
MS.gene33055.t1 MTR_2g090190 28.390 236 129 7 263 461 90 322 3.04e-15 78.6
MS.gene33055.t1 MTR_1g083750 30.712 267 137 10 264 518 69 299 3.44e-15 78.2
MS.gene33055.t1 MTR_7g029240 30.583 206 118 8 264 456 69 262 4.69e-15 77.8
MS.gene33055.t1 MTR_3g032700 27.491 291 162 10 263 516 68 346 6.37e-15 77.4
MS.gene33055.t1 MTR_1g067210 27.181 298 159 12 258 516 72 350 1.09e-14 76.3
MS.gene33055.t1 MTR_7g080170 37.226 137 70 4 341 461 99 235 1.91e-14 75.5
MS.gene33055.t1 MTR_3g032660 27.148 291 163 10 263 516 68 346 2.53e-14 75.5
MS.gene33055.t1 MTR_7g100240 29.339 242 116 11 258 461 67 291 3.46e-14 74.7
MS.gene33055.t1 MTR_7g060770 25.342 292 174 10 263 517 263 547 4.95e-14 75.1
MS.gene33055.t1 MTR_1g106855 31.381 239 114 12 263 464 61 286 7.76e-14 72.8
MS.gene33055.t1 MTR_8g074930 27.386 241 117 8 263 463 79 301 8.89e-14 73.6
MS.gene33055.t1 MTR_5g071550 32.215 149 75 4 246 391 138 263 1.49e-13 71.6
MS.gene33055.t1 MTR_1g112840 26.556 241 119 9 263 463 81 303 4.93e-13 71.2
MS.gene33055.t1 MTR_1g083750 34.715 193 92 8 338 518 37 207 6.30e-13 70.5
MS.gene33055.t1 MTR_4g113480 30.000 230 116 9 263 461 74 289 9.87e-13 70.9
MS.gene33055.t1 MTR_7g090530 27.686 242 115 12 263 463 69 291 1.27e-12 70.1
MS.gene33055.t1 MTR_2g033910 25.086 291 166 10 263 516 75 350 4.76e-12 68.2
MS.gene33055.t1 MTR_4g123080 31.757 148 75 5 381 522 110 237 1.42e-11 65.5
MS.gene33055.t1 MTR_8g074930 31.210 157 76 3 339 463 33 189 1.82e-11 65.5
MS.gene33055.t1 MTR_0015s0140 26.471 238 118 10 263 461 79 298 3.65e-11 65.5
MS.gene33055.t1 MTR_3g032590 30.093 216 107 8 340 516 142 352 7.55e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33055.t1 AT1G72770 56.422 436 161 5 104 526 92 511 4.52e-164 475
MS.gene33055.t1 AT1G72770 56.422 436 161 5 104 526 92 511 4.52e-164 475
MS.gene33055.t1 AT1G72770 56.422 436 161 5 104 526 92 511 4.52e-164 475
MS.gene33055.t1 AT1G17550 55.607 428 169 4 110 526 94 511 1.07e-159 464
MS.gene33055.t1 AT1G17550 55.607 428 169 4 110 526 94 511 1.07e-159 464
MS.gene33055.t1 AT5G57050 67.262 336 93 6 197 526 97 421 3.23e-157 454
MS.gene33055.t1 AT5G57050 67.262 336 93 6 197 526 57 381 6.90e-157 452
MS.gene33055.t1 AT4G26080 65.774 336 91 6 197 525 113 431 1.42e-149 436
MS.gene33055.t1 AT1G72770 51.840 326 128 5 104 416 92 401 1.53e-98 304
MS.gene33055.t1 AT1G72770 51.840 326 128 5 104 416 92 401 1.53e-98 304
MS.gene33055.t1 AT5G57050 62.667 225 71 5 197 420 97 309 6.03e-92 283
MS.gene33055.t1 AT1G07430 42.222 360 137 8 202 521 110 438 3.08e-79 255
MS.gene33055.t1 AT2G29380 45.141 319 132 7 210 517 75 361 1.00e-77 249
MS.gene33055.t1 AT3G11410 44.551 312 119 7 170 463 68 343 7.58e-73 237
MS.gene33055.t1 AT5G51760 41.945 329 156 5 206 517 72 382 2.41e-68 225
MS.gene33055.t1 AT5G51760 41.945 329 156 5 206 517 102 412 6.29e-68 225
MS.gene33055.t1 AT5G59220 44.918 305 123 7 184 474 79 352 1.43e-67 224
MS.gene33055.t1 AT5G59220 41.328 271 114 7 162 416 55 296 1.55e-47 167
MS.gene33055.t1 AT5G53140 36.066 305 135 9 214 517 103 348 4.07e-45 164
MS.gene33055.t1 AT5G53140 36.066 305 135 9 214 517 103 348 4.07e-45 164
MS.gene33055.t1 AT5G24940 35.644 303 135 9 213 514 34 277 5.94e-45 164
MS.gene33055.t1 AT5G10740 35.099 302 138 7 213 514 34 277 1.24e-44 161
MS.gene33055.t1 AT5G10740 35.099 302 138 7 213 514 34 277 1.24e-44 161
MS.gene33055.t1 AT4G31750 34.768 302 139 7 213 514 34 277 1.81e-44 159
MS.gene33055.t1 AT4G31750 34.768 302 139 7 213 514 34 277 2.44e-44 159
MS.gene33055.t1 AT4G31750 34.768 302 139 7 213 514 34 277 2.44e-44 159
MS.gene33055.t1 AT1G43900 34.628 309 135 9 213 517 124 369 1.29e-41 153
MS.gene33055.t1 AT1G67820 32.222 360 148 10 213 516 85 404 5.48e-40 150
MS.gene33055.t1 AT1G67820 32.500 360 147 11 213 516 121 440 1.17e-39 150
MS.gene33055.t1 AT2G40180 37.500 256 129 7 263 517 161 386 3.52e-38 144
MS.gene33055.t1 AT1G07160 33.550 307 148 7 214 516 122 376 3.52e-35 136
MS.gene33055.t1 AT2G30020 34.416 308 145 10 214 517 139 393 6.41e-35 135
MS.gene33055.t1 AT2G33700 33.588 262 130 8 263 518 123 346 2.29e-32 128
MS.gene33055.t1 AT3G17250 31.136 273 146 8 263 521 158 402 7.11e-32 127
MS.gene33055.t1 AT2G25620 30.769 312 155 10 220 519 97 359 1.33e-31 126
MS.gene33055.t1 AT2G25620 30.769 312 155 10 220 519 97 359 1.33e-31 126
MS.gene33055.t1 AT3G51470 31.939 263 135 8 263 519 62 286 4.05e-31 123
MS.gene33055.t1 AT3G51470 31.939 263 135 8 263 519 106 330 6.89e-31 123
MS.gene33055.t1 AT2G40860 29.936 314 154 9 214 518 296 552 7.86e-31 126
MS.gene33055.t1 AT1G48040 32.727 275 141 9 263 521 116 362 9.01e-31 124
MS.gene33055.t1 AT2G40860 29.936 314 154 9 214 518 394 650 1.55e-30 126
MS.gene33055.t1 AT3G62260 31.179 263 148 7 258 514 22 257 1.72e-29 118
MS.gene33055.t1 AT3G62260 31.179 263 148 7 258 514 111 346 6.34e-29 118
MS.gene33055.t1 AT2G34740 33.333 258 126 8 263 516 119 334 6.68e-29 117
MS.gene33055.t1 AT3G62260 31.179 263 148 7 258 514 112 347 6.83e-29 118
MS.gene33055.t1 AT1G22280 32.567 261 132 8 263 517 65 287 2.87e-28 114
MS.gene33055.t1 AT1G78200 33.721 258 130 7 263 517 19 238 1.30e-27 111
MS.gene33055.t1 AT1G78200 33.721 258 130 7 263 517 19 238 1.30e-27 111
MS.gene33055.t1 AT1G34750 33.333 258 128 8 263 517 66 282 2.80e-27 111
MS.gene33055.t1 AT1G34750 33.333 258 128 8 263 517 66 282 2.80e-27 111
MS.gene33055.t1 AT1G34750 33.333 258 128 8 263 517 66 282 2.80e-27 111
MS.gene33055.t1 AT1G22280 32.567 261 126 8 263 517 65 281 2.90e-27 111
MS.gene33055.t1 AT1G78200 33.333 258 131 8 263 517 64 283 4.48e-27 111
MS.gene33055.t1 AT1G78200 33.333 258 131 8 263 517 64 283 4.48e-27 111
MS.gene33055.t1 AT1G78200 33.333 258 131 8 263 517 64 283 4.48e-27 111
MS.gene33055.t1 AT2G40860 29.771 262 138 7 214 466 394 618 1.72e-26 114
MS.gene33055.t1 AT2G25070 30.847 295 136 12 213 466 24 291 2.59e-26 110
MS.gene33055.t1 AT2G25070 30.847 295 136 12 213 466 24 291 2.59e-26 110
MS.gene33055.t1 AT2G20630 32.950 261 125 9 263 517 63 279 1.33e-25 106
MS.gene33055.t1 AT2G20630 33.074 257 122 9 263 513 63 275 7.97e-25 104
MS.gene33055.t1 AT4G31860 29.932 294 140 11 213 466 24 291 3.07e-24 103
MS.gene33055.t1 AT4G31860 29.932 294 140 11 213 466 24 291 5.39e-24 103
MS.gene33055.t1 AT3G15260 31.783 258 132 7 263 517 73 289 6.28e-24 102
MS.gene33055.t1 AT3G15260 31.783 258 132 7 263 517 73 289 6.28e-24 102
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 8.03e-24 105
MS.gene33055.t1 AT4G28400 32.075 265 120 11 263 516 45 260 2.10e-23 100
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.26e-23 105
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.58e-23 104
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.58e-23 104
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.58e-23 104
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.58e-23 104
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.59e-23 104
MS.gene33055.t1 AT4G28400 29.430 316 157 13 218 516 16 282 2.94e-23 100
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 3.35e-23 104
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 3.62e-23 104
MS.gene33055.t1 AT3G63340 35.000 240 87 9 341 524 233 459 3.62e-23 104
MS.gene33055.t1 AT3G63320 27.844 334 153 12 265 525 71 389 4.52e-23 102
MS.gene33055.t1 AT3G63320 33.191 235 94 8 341 525 85 306 1.03e-22 100
MS.gene33055.t1 AT3G06270 26.460 291 145 7 262 517 87 343 7.06e-22 97.4
MS.gene33055.t1 AT1G34750 33.663 202 109 6 263 461 66 245 1.10e-21 94.7
MS.gene33055.t1 AT3G16800 31.818 220 128 6 263 463 93 309 4.84e-21 95.1
MS.gene33055.t1 AT3G16800 31.818 220 128 6 263 463 93 309 4.84e-21 95.1
MS.gene33055.t1 AT3G16800 31.818 220 128 6 263 463 93 309 4.84e-21 95.1
MS.gene33055.t1 AT4G27800 27.616 344 161 13 210 516 56 348 1.42e-20 94.4
MS.gene33055.t1 AT2G34740 34.343 198 105 7 263 456 115 291 1.60e-20 92.8
MS.gene33055.t1 AT2G34740 36.318 201 97 9 263 456 133 309 1.70e-20 93.2
MS.gene33055.t1 AT1G09160 31.228 285 143 11 246 518 56 299 1.81e-20 94.4
MS.gene33055.t1 AT1G09160 31.228 285 143 11 246 518 56 299 1.81e-20 94.4
MS.gene33055.t1 AT4G31860 30.216 278 128 11 213 450 24 275 2.16e-20 91.7
MS.gene33055.t1 AT3G16800 28.676 272 158 9 266 518 1 255 3.07e-20 90.9
MS.gene33055.t1 AT3G16800 28.676 272 158 9 266 518 1 255 3.07e-20 90.9
MS.gene33055.t1 AT5G26010 32.735 223 117 8 261 461 71 282 1.21e-19 90.5
MS.gene33055.t1 AT4G08260 31.373 255 109 10 264 517 20 209 1.54e-19 87.8
MS.gene33055.t1 AT3G63340 40.491 163 71 7 375 524 343 492 4.71e-19 91.7
MS.gene33055.t1 AT1G68410 28.720 289 153 10 247 523 62 309 1.21e-18 89.0
MS.gene33055.t1 AT1G68410 28.720 289 153 10 247 523 62 309 1.21e-18 89.0
MS.gene33055.t1 AT1G68410 28.720 289 153 10 247 523 62 309 1.21e-18 89.0
MS.gene33055.t1 AT1G68410 28.720 289 153 10 247 523 62 309 1.21e-18 89.0
MS.gene33055.t1 AT5G02760 30.603 232 115 7 263 461 72 290 2.18e-18 87.4
MS.gene33055.t1 AT4G28400 29.150 247 140 9 218 452 16 239 6.53e-18 84.0
MS.gene33055.t1 AT4G03415 29.388 245 131 6 256 461 90 331 9.98e-18 86.3
MS.gene33055.t1 AT4G03415 29.388 245 131 6 256 461 90 331 9.98e-18 86.3
MS.gene33055.t1 AT4G03415 29.388 245 131 6 256 461 90 331 9.98e-18 86.3
MS.gene33055.t1 AT2G40860 27.197 239 128 7 214 443 394 595 1.63e-17 86.3
MS.gene33055.t1 AT5G01700 31.674 221 125 8 261 458 27 244 1.05e-16 82.0
MS.gene33055.t1 AT4G38520 26.804 291 156 11 263 514 81 353 1.08e-16 82.8
MS.gene33055.t1 AT4G38520 26.804 291 156 11 263 514 81 353 1.08e-16 82.8
MS.gene33055.t1 AT1G47380 28.881 277 135 11 264 521 65 298 1.13e-16 82.8
MS.gene33055.t1 AT4G32950 29.137 278 144 10 265 520 74 320 2.16e-16 80.9
MS.gene33055.t1 AT5G01700 31.674 221 125 8 261 458 76 293 2.53e-16 81.3
MS.gene33055.t1 AT5G27930 31.556 225 125 8 263 461 92 313 3.48e-16 80.9
MS.gene33055.t1 AT5G27930 31.556 225 125 8 263 461 92 313 3.48e-16 80.9
MS.gene33055.t1 AT4G27800 27.211 294 143 11 210 466 56 315 4.33e-16 80.1
MS.gene33055.t1 AT3G12620 27.000 300 157 11 258 516 79 357 4.63e-16 80.5
MS.gene33055.t1 AT3G12620 27.000 300 157 11 258 516 79 357 4.63e-16 80.5
MS.gene33055.t1 AT4G27800 27.211 294 143 11 210 466 56 315 5.09e-16 79.7
MS.gene33055.t1 AT1G16220 29.084 251 135 11 253 461 86 335 1.12e-15 80.1
MS.gene33055.t1 AT1G03590 29.339 242 132 7 256 461 83 321 1.22e-15 79.7
MS.gene33055.t1 AT3G55050 26.510 298 161 10 258 516 80 358 1.54e-15 79.0
MS.gene33055.t1 AT3G55050 26.510 298 161 10 258 516 80 358 1.54e-15 79.0
MS.gene33055.t1 AT5G36250 35.714 140 74 4 341 464 207 346 6.05e-15 77.4
MS.gene33055.t1 AT1G17545 75.000 48 12 0 333 380 131 178 6.63e-15 73.6
MS.gene33055.t1 AT3G05640 31.532 222 123 8 263 461 93 308 9.31e-15 76.3
MS.gene33055.t1 AT3G05640 31.532 222 123 8 263 461 93 308 9.31e-15 76.3
MS.gene33055.t1 AT3G05640 31.532 222 123 8 263 461 93 308 9.31e-15 76.3
MS.gene33055.t1 AT1G79630 27.675 271 133 11 253 461 19 288 1.90e-14 75.9
MS.gene33055.t1 AT1G79630 27.675 271 133 11 253 461 19 288 1.90e-14 75.9
MS.gene33055.t1 AT1G79630 27.675 271 133 11 253 461 89 358 2.79e-14 75.9
MS.gene33055.t1 AT4G33920 25.817 306 167 11 253 516 51 338 2.83e-14 75.1
MS.gene33055.t1 AT1G79630 27.675 271 133 11 253 461 85 354 3.02e-14 75.5
MS.gene33055.t1 AT3G27140 26.744 258 105 4 263 520 19 192 3.34e-14 72.8
MS.gene33055.t1 AT1G79630 35.036 137 73 3 341 461 112 248 7.45e-14 73.9
MS.gene33055.t1 AT1G79630 35.036 137 73 3 341 461 112 248 7.45e-14 73.9
MS.gene33055.t1 AT1G79630 35.036 137 73 3 341 461 112 248 7.45e-14 73.9
MS.gene33055.t1 AT1G79630 35.036 137 73 3 341 461 112 248 7.45e-14 73.9
MS.gene33055.t1 AT3G02750 37.313 134 68 4 341 458 216 349 8.91e-14 74.3
MS.gene33055.t1 AT3G02750 37.313 134 68 4 341 458 216 349 8.91e-14 74.3
MS.gene33055.t1 AT5G06750 27.500 240 123 8 263 464 82 308 7.92e-13 70.9
MS.gene33055.t1 AT5G06750 27.500 240 123 8 263 464 82 308 7.92e-13 70.9
MS.gene33055.t1 AT5G27930 30.986 213 118 8 263 449 92 301 1.76e-11 65.9
MS.gene33055.t1 AT4G33920 28.111 217 112 6 339 516 14 225 4.73e-11 63.9
MS.gene33055.t1 AT4G33920 26.939 245 132 8 314 516 16 255 4.86e-11 64.3
MS.gene33055.t1 AT2G05050 33.333 138 67 4 389 517 69 190 6.42e-11 62.4

Find 130 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGTCTTTGCTTCCTTTC+TGG 0.045002 1.1:-6651180 None:intergenic
GCAACTGCGTCTTCCATTTC+TGG 0.094152 1.1:-6647824 None:intergenic
GAATCATCATCCTCACTTTC+TGG 0.164991 1.1:-6647401 None:intergenic
TTTCACCAATTGTTTCTTAA+AGG 0.174144 1.1:+6648181 MS.gene33055:CDS
AATTGGATTATACCCCATTA+TGG 0.180255 1.1:+6647774 MS.gene33055:CDS
GCAGTGGAGCCAACAGTTTC+TGG 0.226645 1.1:-6648248 None:intergenic
CTCGAAAACGTATACTTCTT+TGG 0.264509 1.1:+6651062 MS.gene33055:CDS
TCATAATAAGAGTGGCAATT+TGG 0.264601 1.1:+6647256 MS.gene33055:CDS
GTTGCTCACACCGCTGATTT+GGG 0.265336 1.1:+6647590 MS.gene33055:CDS
TGTTGCTCACACCGCTGATT+TGG 0.282659 1.1:+6647589 MS.gene33055:CDS
CCTCAAATGACCCATTTCTT+TGG 0.293699 1.1:+6647929 MS.gene33055:CDS
AGAGGATGAATGTCTCATTT+TGG 0.293893 1.1:+6650988 MS.gene33055:CDS
ATTCCCATTCAGATGCTAAT+TGG 0.295899 1.1:+6647869 MS.gene33055:CDS
CGAACCTACAACCGTTTCAT+TGG 0.308003 1.1:-6647225 None:intergenic
CGAGGAATGAATTGAACTTC+TGG 0.323228 1.1:-6650959 None:intergenic
TGGAATGGCCATCGTGTATT+TGG 0.332051 1.1:+6648522 MS.gene33055:CDS
TTCTTGCATATTCATCTTCT+CGG 0.337117 1.1:-6648470 None:intergenic
TTTGAAACCGTCAATTATTC+CGG 0.343631 1.1:+6650934 MS.gene33055:CDS
CTTGCAATGTCAAGATCTAT+TGG 0.345690 1.1:+6648549 MS.gene33055:CDS
GTGATATGAATCCCCATAAT+GGG 0.351275 1.1:-6647787 None:intergenic
AGTGATATGAATCCCCATAA+TGG 0.362495 1.1:-6647788 None:intergenic
TTTCCTCGGTCAATGCAATA+TGG 0.366641 1.1:-6648088 None:intergenic
GAGCAACTGTAGAAGGCTTT+AGG 0.372631 1.1:-6647697 None:intergenic
CATCATAGACTCCAAAGAAA+TGG 0.377707 1.1:-6647940 None:intergenic
ATTGGATTATACCCCATTAT+GGG 0.378212 1.1:+6647775 MS.gene33055:CDS
AATCATCATCCTCACTTTCT+GGG 0.380381 1.1:-6647400 None:intergenic
TCTGATTCAACTCCAATCTC+TGG 0.385927 1.1:-6647674 None:intergenic
AGCTGATGAGCAACTGTAGA+AGG 0.391208 1.1:-6647704 None:intergenic
AAAAGTCACTCAACCGGTAT+TGG 0.399911 1.1:+6647298 MS.gene33055:CDS
GGATGATGATTCATTATCAT+TGG 0.403575 1.1:+6647412 MS.gene33055:CDS
GGCAATTTGGATGTTGAAAT+CGG 0.405405 1.1:+6647269 MS.gene33055:CDS
GTCAGTGAAAACAGTAGTTT+AGG 0.415062 1.1:+6647476 MS.gene33055:CDS
GCATATTCATCTTCTCGGTT+CGG 0.417201 1.1:-6648465 None:intergenic
GGAAGGAGAAAGTCCTTTGA+TGG 0.419922 1.1:+6647325 MS.gene33055:CDS
CAATGAAACGGTTGTAGGTT+CGG 0.421297 1.1:+6647226 MS.gene33055:CDS
TCTGATAATACTTCAGAAGT+TGG 0.425515 1.1:+6647518 MS.gene33055:CDS
GGAAGCCTTAGCTACAGAAT+TGG 0.425593 1.1:-6647204 None:intergenic
TCATTTGAGGCCTAAAACAC+CGG 0.428906 1.1:-6647916 None:intergenic
TCTGCTGCTGCTTGTGCCGC+AGG 0.429737 1.1:-6651136 None:intergenic
CATTTCTTTGGAGTCTATGA+TGG 0.430905 1.1:+6647941 MS.gene33055:CDS
ATCAACCTTTAAGAAACAAT+TGG 0.433425 1.1:-6648186 None:intergenic
TTTAAGCTGATGGCGGATGC+AGG 0.433786 1.1:+6647173 MS.gene33055:CDS
GTGAATCTTGACCCAGAGAT+TGG 0.434954 1.1:+6647662 MS.gene33055:CDS
CTTGACAAGTTCTATTTCCT+CGG 0.439172 1.1:-6648102 None:intergenic
GCTTCCAATGAAACGGTTGT+AGG 0.442669 1.1:+6647221 MS.gene33055:CDS
TGATGGCCATGGTGGCTCTC+AGG 0.443960 1.1:+6647958 MS.gene33055:CDS
ATGTGGACGAAGACCAGAAA+TGG 0.445581 1.1:+6647811 MS.gene33055:CDS
ATCCGCCATCAGCTTAAATC+TGG 0.451378 1.1:-6647168 None:intergenic
TTAAAGGTTGATGCAGAAGT+TGG 0.451892 1.1:+6648197 MS.gene33055:CDS
ATTCATTCCTCGTGCGAAAG+AGG 0.459888 1.1:+6650970 MS.gene33055:CDS
CACTCAACCGGTATTGGAAA+AGG 0.463060 1.1:+6647304 MS.gene33055:CDS
ATGAATTGAACTTCTGGATC+CGG 0.468005 1.1:-6650953 None:intergenic
CTGATAATACTTCAGAAGTT+GGG 0.471233 1.1:+6647519 MS.gene33055:CDS
TCATCAGCTGCCTCAGGAAG+AGG 0.476248 1.1:+6647718 MS.gene33055:CDS
CCAAAGAAATGGGTCATTTG+AGG 0.477021 1.1:-6647929 None:intergenic
ATCACCAATTAGCATCTGAA+TGG 0.480260 1.1:-6647873 None:intergenic
ATCATAGACTCCAAAGAAAT+GGG 0.490546 1.1:-6647939 None:intergenic
AAGGTTGATGCAGAAGTTGG+AGG 0.502623 1.1:+6648200 MS.gene33055:CDS
AAACACCGGTTTATTCCATC+AGG 0.504331 1.1:-6647902 None:intergenic
TTTGGCTAGTGATGGTCTAT+GGG 0.504817 1.1:+6651006 MS.gene33055:CDS
AGTTGCTCATCAGCTGCCTC+AGG 0.504892 1.1:+6647712 MS.gene33055:CDS
TTGCTCACACCGCTGATTTG+GGG 0.507921 1.1:+6647591 MS.gene33055:CDS
TCTGGATCCGGAATAATTGA+CGG 0.509776 1.1:-6650941 None:intergenic
ACTACCCTCGGAAAGGGGAG+AGG 0.509832 1.1:+6651105 MS.gene33055:CDS
CATGGAACTACCCTCGGAAA+GGG 0.512080 1.1:+6651099 MS.gene33055:CDS
TATTACAAAAGTCACTCAAC+CGG 0.514290 1.1:+6647292 MS.gene33055:CDS
AGCTAAGGCTTCCAATGAAA+CGG 0.515251 1.1:+6647214 MS.gene33055:CDS
TCACCAATTAGCATCTGAAT+GGG 0.516982 1.1:-6647872 None:intergenic
TTCTTTGCCACGACAAAGAA+CGG 0.525190 1.1:-6648330 None:intergenic
GATGATTCATTATCATTGGA+AGG 0.525235 1.1:+6647416 MS.gene33055:CDS
ATTGTCCAATTCTGTAGCTA+AGG 0.525830 1.1:+6647199 MS.gene33055:CDS
TCGAATCGCGCTCTCCAGAA+AGG 0.530906 1.1:+6651166 MS.gene33055:CDS
TATAAGAGCAACAACGGCAG+TGG 0.535831 1.1:-6648264 None:intergenic
GAACGAGTGTAACAGTTGTC+CGG 0.539242 1.1:+6647741 MS.gene33055:CDS
TTTGGAGTCTATGATGGCCA+TGG 0.539364 1.1:+6647947 MS.gene33055:CDS
CTACCCTCGGAAAGGGGAGA+GGG 0.541861 1.1:+6651106 MS.gene33055:CDS
CTGATTCAACTCCAATCTCT+GGG 0.546780 1.1:-6647673 None:intergenic
ACGCAGTTGCAACTGTTCCT+CGG 0.546920 1.1:+6647837 MS.gene33055:CDS
ATCGATGGAGGTCTCAAAGA+TGG 0.546981 1.1:+6648134 MS.gene33055:CDS
TGGTCCACTGATAACGCCAT+TGG 0.547435 1.1:-6648353 None:intergenic
CATCAGCTGCCTCAGGAAGA+GGG 0.548267 1.1:+6647719 MS.gene33055:CDS
ATTGGTGATCGAGTACCTGA+TGG 0.554508 1.1:+6647887 MS.gene33055:CDS
TCAAGAGCCGTTCTTTGTCG+TGG 0.555574 1.1:+6648323 MS.gene33055:CDS
GAGTACCTGATGGAATAAAC+CGG 0.557358 1.1:+6647897 MS.gene33055:CDS
TGGGATATCATATCCATCAA+AGG 0.572598 1.1:-6647338 None:intergenic
CATTCATCCTCTTTCGCACG+AGG 0.572975 1.1:-6650977 None:intergenic
TTGGATTATACCCCATTATG+GGG 0.575592 1.1:+6647776 MS.gene33055:CDS
TTGTCGTGGCAAAGAACCAA+TGG 0.576382 1.1:+6648337 MS.gene33055:CDS
CAAGATTCACTGCCACAGCA+AGG 0.577058 1.1:-6647649 None:intergenic
AAGATTCACTGCCACAGCAA+GGG 0.578634 1.1:-6647648 None:intergenic
ACTACCCTCTCCCCTTTCCG+AGG 0.579476 1.1:-6651110 None:intergenic
AAGATGGTTGCCAAGATCAG+TGG 0.579539 1.1:+6648150 MS.gene33055:CDS
TATGCAAGAATTGAAGCAGC+CGG 0.584084 1.1:+6648483 MS.gene33055:CDS
TTAAGCTGATGGCGGATGCA+GGG 0.585306 1.1:+6647174 MS.gene33055:CDS
TGCTCACACCGCTGATTTGG+GGG 0.585335 1.1:+6647592 MS.gene33055:CDS
TTGCTCTTATACTTTCGTTG+AGG 0.587887 1.1:-6651229 None:intergenic
AGATTCACTGCCACAGCAAG+GGG 0.592961 1.1:-6647647 None:intergenic
GCATGGAACTACCCTCGGAA+AGG 0.594104 1.1:+6651098 MS.gene33055:CDS
AAACGGCATGGAACTACCCT+CGG 0.595649 1.1:+6651093 MS.gene33055:CDS
AGAACCAATGGCGTTATCAG+TGG 0.595715 1.1:+6648349 MS.gene33055:CDS
CGAGGAAATAGAACTTGTCA+AGG 0.596007 1.1:+6648103 MS.gene33055:CDS
CAACATCACTGTGATTGTTG+TGG 0.599532 1.1:+6651198 MS.gene33055:CDS
AGTGAAAACAGTAGTTTAGG+TGG 0.602262 1.1:+6647479 MS.gene33055:CDS
GTCAAGGAAAGTCTAATCGA+TGG 0.602817 1.1:+6648119 MS.gene33055:CDS
GACGATTGTCATAATAAGAG+TGG 0.608491 1.1:+6647248 MS.gene33055:CDS
TGTATCCAGATTTAAGCTGA+TGG 0.613837 1.1:+6647163 MS.gene33055:CDS
ATGGAACTACCCTCGGAAAG+GGG 0.615281 1.1:+6651100 MS.gene33055:CDS
CTACCCTCTCCCCTTTCCGA+GGG 0.624958 1.1:-6651109 None:intergenic
AAACGAAGAGGTGTGTGACC+TGG 0.628768 1.1:+6651039 MS.gene33055:CDS
ATCATCATCCTCACTTTCTG+GGG 0.630351 1.1:-6647399 None:intergenic
CAACCGGTATTGGAAAAGGA+AGG 0.631534 1.1:+6647308 MS.gene33055:CDS
GGAAAAGTGATACAGTGGAA+TGG 0.631701 1.1:+6648507 MS.gene33055:CDS
TGAAGATATAAGAGCAACAA+CGG 0.632248 1.1:-6648270 None:intergenic
ACACTCGTTCCCTCTTCCTG+AGG 0.634544 1.1:-6647728 None:intergenic
ACGATTAGCCCCAGAAAGTG+AGG 0.636780 1.1:+6647391 MS.gene33055:CDS
AGTTTACCTGAGAGCCACCA+TGG 0.637746 1.1:-6647964 None:intergenic
TGGGGATTCATATCACTATG+TGG 0.637964 1.1:+6647794 MS.gene33055:CDS
GGAGTCTATGATGGCCATGG+TGG 0.638051 1.1:+6647950 MS.gene33055:CDS
GTTGTTGCGCCAGAAACTGT+TGG 0.640473 1.1:+6648239 MS.gene33055:CDS
CCGGAGGAAAAGTGATACAG+TGG 0.650164 1.1:+6648502 MS.gene33055:CDS
CATATTATAGTTGCAAACTG+TGG 0.656409 1.1:+6648296 MS.gene33055:CDS
GGGAGAGGGTAGTGATCCTG+CGG 0.656471 1.1:+6651120 MS.gene33055:CDS
TGATATGAATCCCCATAATG+GGG 0.675948 1.1:-6647786 None:intergenic
GCAAGAATTGAAGCAGCCGG+AGG 0.679321 1.1:+6648486 MS.gene33055:CDS
AAGGAAAGTCTAATCGATGG+AGG 0.680492 1.1:+6648122 MS.gene33055:CDS
TATGAATGAACCCCTTGCTG+TGG 0.687921 1.1:+6647637 MS.gene33055:CDS
ATCCAGATTTAAGCTGATGG+CGG 0.688242 1.1:+6647166 MS.gene33055:CDS
CATCCATATTGCATTGACCG+AGG 0.698699 1.1:+6648085 MS.gene33055:CDS
CAAGAACACCAAATACACGA+TGG 0.734296 1.1:-6648530 None:intergenic
GGATGTGATGACAAACGAAG+AGG 0.744441 1.1:+6651027 MS.gene33055:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTTTTAAGATAAAATTT+AGG + chr1.1:6649526-6649545 MS.gene33055:intron 10.0%
!!! GTTTAATTTTTTTATTTGAA+TGG + chr1.1:6650731-6650750 MS.gene33055:intron 10.0%
!! AAGTTTATTCCATAAATTAT+AGG + chr1.1:6649242-6649261 MS.gene33055:intron 15.0%
!!! AACTAAAACACTTTTATTTT+GGG - chr1.1:6647360-6647379 None:intergenic 15.0%
!!! ATGATAAATTTTACTTCATT+TGG + chr1.1:6648585-6648604 MS.gene33055:intron 15.0%
!!! TGTTTTTCCTTTTAATTAAT+TGG + chr1.1:6649988-6650007 MS.gene33055:intron 15.0%
!! AATCATGTGTACTAATTTAA+GGG + chr1.1:6649920-6649939 MS.gene33055:intron 20.0%
!! ACGAAATCCAATTAATTAAA+AGG - chr1.1:6649998-6650017 None:intergenic 20.0%
!! ATAAACCAGTACAAAATAAT+TGG + chr1.1:6649301-6649320 MS.gene33055:intron 20.0%
!! ATAAGTTAGCAGTATTAATT+AGG - chr1.1:6648726-6648745 None:intergenic 20.0%
!! CATAATAAATAAGCATGTAT+CGG - chr1.1:6648967-6648986 None:intergenic 20.0%
!! GAGAAATAATCAAACTAAAT+TGG - chr1.1:6650380-6650399 None:intergenic 20.0%
!! GTACTTTATTAAGAAATGAA+TGG + chr1.1:6649951-6649970 MS.gene33055:intron 20.0%
!! TAAAAAAATTAGGACCAAAA+TGG - chr1.1:6650145-6650164 None:intergenic 20.0%
!! TAAGTTAGCAGTATTAATTA+GGG - chr1.1:6648725-6648744 None:intergenic 20.0%
!! TATCTTAATATTTCTCATGA+TGG + chr1.1:6650542-6650561 MS.gene33055:intron 20.0%
!! TCTAAAAACTAAGAATAAAG+TGG - chr1.1:6650273-6650292 None:intergenic 20.0%
!!! AAAGAAGATTTAGAACTTAT+TGG + chr1.1:6650509-6650528 MS.gene33055:intron 20.0%
!!! AGAGTTGTTTTTCTTTTTTT+AGG + chr1.1:6649848-6649867 MS.gene33055:intron 20.0%
!!! CAACTAAAACACTTTTATTT+TGG - chr1.1:6647361-6647380 None:intergenic 20.0%
!!! GAAAACAAAAATTTCCATTT+TGG + chr1.1:6650128-6650147 MS.gene33055:intron 20.0%
!!! GAGTTGTTTTTCTTTTTTTA+GGG + chr1.1:6649849-6649868 MS.gene33055:intron 20.0%
!!! TATTAATTAGGGGTATATTT+AGG - chr1.1:6648714-6648733 None:intergenic 20.0%
!!! TTTCAAGCTCTAAAAAAATT+AGG - chr1.1:6650155-6650174 None:intergenic 20.0%
! AAATGTGAAAAAAGCAAAAG+GGG + chr1.1:6648852-6648871 MS.gene33055:intron 25.0%
! AAGTTAGCAGTATTAATTAG+GGG - chr1.1:6648724-6648743 None:intergenic 25.0%
! AGAAATGTGAAAAAAGCAAA+AGG + chr1.1:6648850-6648869 MS.gene33055:intron 25.0%
! ATAACAAAAGATTCATTCAG+TGG - chr1.1:6649191-6649210 None:intergenic 25.0%
! ATGCATCTAGTAATTTGAAA+AGG - chr1.1:6648678-6648697 None:intergenic 25.0%
! CAATCATGTGTACTAATTTA+AGG + chr1.1:6649919-6649938 MS.gene33055:intron 25.0%
! CATACAAACAAAGGATAATT+TGG + chr1.1:6648776-6648795 MS.gene33055:intron 25.0%
! GAAATGTGAAAAAAGCAAAA+GGG + chr1.1:6648851-6648870 MS.gene33055:intron 25.0%
! GTAATTGTGTTGTGTTTATT+AGG + chr1.1:6650863-6650882 MS.gene33055:intron 25.0%
! TAAAATTACAAACTCCAACA+CGG + chr1.1:6648900-6648919 MS.gene33055:intron 25.0%
! TAATCTTTCCTCACAAAATT+CGG + chr1.1:6649335-6649354 MS.gene33055:intron 25.0%
! TACACATGATTGATATAAAC+TGG - chr1.1:6649911-6649930 None:intergenic 25.0%
! TGAAAAGGGGTTTATATTTA+GGG - chr1.1:6648663-6648682 None:intergenic 25.0%
! TGCATCTAGTAATTTGAAAA+GGG - chr1.1:6648677-6648696 None:intergenic 25.0%
! TTGAAAAGGGGTTTATATTT+AGG - chr1.1:6648664-6648683 None:intergenic 25.0%
! TTTAACACACATACAAACAA+AGG + chr1.1:6648767-6648786 MS.gene33055:intron 25.0%
!! ATCAACCTTTAAGAAACAAT+TGG - chr1.1:6648189-6648208 None:intergenic 25.0%
!! ATTTGTCATTTATGTTCAAC+AGG - chr1.1:6650230-6650249 None:intergenic 25.0%
!! CTTTTAGTCAGTTATTTAGA+GGG + chr1.1:6649678-6649697 MS.gene33055:intron 25.0%
!! GAGCTTAATTTTTCTCATTT+AGG + chr1.1:6648040-6648059 MS.gene33055:intron 25.0%
!! TCTTTTAGTCAGTTATTTAG+AGG + chr1.1:6649677-6649696 MS.gene33055:intron 25.0%
!! TTTCACCAATTGTTTCTTAA+AGG + chr1.1:6648181-6648200 MS.gene33055:CDS 25.0%
!!! ATTTTTGTTTTCCACATTCA+AGG - chr1.1:6650120-6650139 None:intergenic 25.0%
!!! GGACAATTTTTTAGTCAAAT+GGG - chr1.1:6648642-6648661 None:intergenic 25.0%
AAACACAACACAATTACTGT+GGG - chr1.1:6650860-6650879 None:intergenic 30.0%
AAATTATAGGTGTAACAGGT+TGG + chr1.1:6649255-6649274 MS.gene33055:intron 30.0%
AACAAAGAGAGAGAAAAAGT+TGG + chr1.1:6649107-6649126 MS.gene33055:intron 30.0%
AAGGATACTGTATGAAAAGA+AGG - chr1.1:6650456-6650475 None:intergenic 30.0%
AATCACTAGCAAATTCAGAA+TGG - chr1.1:6650625-6650644 None:intergenic 30.0%
AATCCAATTCAAAAACACTC+CGG - chr1.1:6647763-6647782 None:intergenic 30.0%
AATGTGAAAAAAGCAAAAGG+GGG + chr1.1:6648853-6648872 MS.gene33055:intron 30.0%
AATTGGATTATACCCCATTA+TGG + chr1.1:6647774-6647793 MS.gene33055:CDS 30.0%
ACACACTGTAAATGATTCAA+AGG + chr1.1:6649710-6649729 MS.gene33055:intron 30.0%
AGGATACTGTATGAAAAGAA+GGG - chr1.1:6650455-6650474 None:intergenic 30.0%
ATCATAGACTCCAAAGAAAT+GGG - chr1.1:6647942-6647961 None:intergenic 30.0%
ATTGGATTATACCCCATTAT+GGG + chr1.1:6647775-6647794 MS.gene33055:CDS 30.0%
CAAATGGGTGGTTATATATA+GGG - chr1.1:6648627-6648646 None:intergenic 30.0%
CATATTATAGTTGCAAACTG+TGG + chr1.1:6648296-6648315 MS.gene33055:CDS 30.0%
CCAGTACAAAATAATTGGTT+TGG + chr1.1:6649306-6649325 MS.gene33055:intron 30.0%
CCATAAATTATAGGTGTAAC+AGG + chr1.1:6649251-6649270 MS.gene33055:intron 30.0%
CCTGTTACACCTATAATTTA+TGG - chr1.1:6649254-6649273 None:intergenic 30.0%
CGAAAAATGTTAAACACAGA+AGG - chr1.1:6650475-6650494 None:intergenic 30.0%
CTGATAATACTTCAGAAGTT+GGG + chr1.1:6647519-6647538 MS.gene33055:CDS 30.0%
CTTCTTTGGTACAAGAAAAA+CGG + chr1.1:6651076-6651095 MS.gene33055:CDS 30.0%
GAATGGAAAATGCACAAAAT+AGG + chr1.1:6650748-6650767 MS.gene33055:intron 30.0%
GATGATTAACAAGCAGTAAA+TGG - chr1.1:6650098-6650117 None:intergenic 30.0%
GATGATTCATTATCATTGGA+AGG + chr1.1:6647416-6647435 MS.gene33055:CDS 30.0%
GCATCTAGTAATTTGAAAAG+GGG - chr1.1:6648676-6648695 None:intergenic 30.0%
GGATGATGATTCATTATCAT+TGG + chr1.1:6647412-6647431 MS.gene33055:CDS 30.0%
TAAACACAACACAATTACTG+TGG - chr1.1:6650861-6650880 None:intergenic 30.0%
TACACAGGATTGATATAAAC+TGG - chr1.1:6649805-6649824 None:intergenic 30.0%
TATTACAAAAGTCACTCAAC+CGG + chr1.1:6647292-6647311 MS.gene33055:CDS 30.0%
TCAAATGGGTGGTTATATAT+AGG - chr1.1:6648628-6648647 None:intergenic 30.0%
TCAATCCTGTGTACTAATTT+CGG + chr1.1:6649812-6649831 MS.gene33055:intron 30.0%
TCAGACAAAGCTAAAATCAA+CGG - chr1.1:6648005-6648024 None:intergenic 30.0%
TCATAATAAGAGTGGCAATT+TGG + chr1.1:6647256-6647275 MS.gene33055:CDS 30.0%
TCTAGAAGCAACTTACTTTA+TGG - chr1.1:6648376-6648395 None:intergenic 30.0%
TCTGATAATACTTCAGAAGT+TGG + chr1.1:6647518-6647537 MS.gene33055:CDS 30.0%
TGAAGATATAAGAGCAACAA+CGG - chr1.1:6648273-6648292 None:intergenic 30.0%
TGGAAAACAACATTTGTCAT+TGG + chr1.1:6650592-6650611 MS.gene33055:intron 30.0%
TTCTTGCATATTCATCTTCT+CGG - chr1.1:6648473-6648492 None:intergenic 30.0%
TTGTTAATCATCCTTGAATG+TGG + chr1.1:6650106-6650125 MS.gene33055:intron 30.0%
! ACTGATTCAGAATTTCAGAT+GGG - chr1.1:6650063-6650082 None:intergenic 30.0%
! ATAACCTATTTTCCCTTTGT+AGG + chr1.1:6650176-6650195 MS.gene33055:intron 30.0%
! ATCTGAAATTCTGAATCAGT+GGG + chr1.1:6650063-6650082 MS.gene33055:intron 30.0%
! TCAATGTTTCTTCATCGATT+TGG - chr1.1:6649367-6649386 None:intergenic 30.0%
! TCGATGAAGAAACATTGATT+TGG + chr1.1:6649369-6649388 MS.gene33055:intron 30.0%
! TTTGAAACCGTCAATTATTC+CGG + chr1.1:6650934-6650953 MS.gene33055:CDS 30.0%
! TTTTCTATGTCTATCGAACA+TGG - chr1.1:6647548-6647567 None:intergenic 30.0%
!! AAACACTTTTTGGACATTGA+GGG - chr1.1:6649075-6649094 None:intergenic 30.0%
!! CAATGTCCAAAAAGTGTTTA+AGG + chr1.1:6649076-6649095 MS.gene33055:intron 30.0%
!! CCAAACCAATTATTTTGTAC+TGG - chr1.1:6649309-6649328 None:intergenic 30.0%
!! GAAGAAACATTGATTTGGTT+TGG + chr1.1:6649374-6649393 MS.gene33055:intron 30.0%
!! GGTATCTTTAGTTCTAAAGA+GGG + chr1.1:6649745-6649764 MS.gene33055:intron 30.0%
!! TAAACACTTTTTGGACATTG+AGG - chr1.1:6649076-6649095 None:intergenic 30.0%
!! TAGAGGTATCTTCTATAATC+TGG + chr1.1:6649778-6649797 MS.gene33055:intron 30.0%
!!! AAACTTTTTTCCACTGATCT+TGG - chr1.1:6648163-6648182 None:intergenic 30.0%
!!! CAATTTTTTAGTCAAATGGG+TGG - chr1.1:6648639-6648658 None:intergenic 30.0%
!!! GGGACAATTTTTTAGTCAAA+TGG - chr1.1:6648643-6648662 None:intergenic 30.0%
AATCATCATCCTCACTTTCT+GGG - chr1.1:6647403-6647422 None:intergenic 35.0%
AATGCCTACAAAGGGAAAAT+AGG - chr1.1:6650183-6650202 None:intergenic 35.0%
AATTGGATTTCGTGAATGTG+AGG + chr1.1:6650005-6650024 MS.gene33055:intron 35.0%
ACAAAGATACAAACACCTCT+AGG - chr1.1:6649650-6649669 None:intergenic 35.0%
AGAAAGTGAGAAGAGAGAAA+AGG - chr1.1:6649135-6649154 None:intergenic 35.0%
AGATAAAGACATGTGTCCTA+CGG + chr1.1:6649578-6649597 MS.gene33055:intron 35.0%
AGCAAAAGGGGGTTATATAT+AGG + chr1.1:6648864-6648883 MS.gene33055:intron 35.0%
AGTGAAAACAGTAGTTTAGG+TGG + chr1.1:6647479-6647498 MS.gene33055:CDS 35.0%
AGTGATATGAATCCCCATAA+TGG - chr1.1:6647791-6647810 None:intergenic 35.0%
ATCACCAATTAGCATCTGAA+TGG - chr1.1:6647876-6647895 None:intergenic 35.0%
ATGAATTGAACTTCTGGATC+CGG - chr1.1:6650956-6650975 None:intergenic 35.0%
ATTCAAAGGAGAGATTAGAG+CGG + chr1.1:6649724-6649743 MS.gene33055:intron 35.0%
ATTCCCATTCAGATGCTAAT+TGG + chr1.1:6647869-6647888 MS.gene33055:CDS 35.0%
ATTGGATTTCGTGAATGTGA+GGG + chr1.1:6650006-6650025 MS.gene33055:intron 35.0%
ATTGTCCAATTCTGTAGCTA+AGG + chr1.1:6647199-6647218 MS.gene33055:CDS 35.0%
CATCATAGACTCCAAAGAAA+TGG - chr1.1:6647943-6647962 None:intergenic 35.0%
CTCGAAAACGTATACTTCTT+TGG + chr1.1:6651062-6651081 MS.gene33055:CDS 35.0%
CTTGACAAGTTCTATTTCCT+CGG - chr1.1:6648105-6648124 None:intergenic 35.0%
CTTGATTCTCTGTAGAACTA+CGG - chr1.1:6650704-6650723 None:intergenic 35.0%
CTTGCAATGTCAAGATCTAT+TGG + chr1.1:6648549-6648568 MS.gene33055:CDS 35.0%
GAAAGTGAGAAGAGAGAAAA+GGG - chr1.1:6649134-6649153 None:intergenic 35.0%
GACGATTGTCATAATAAGAG+TGG + chr1.1:6647248-6647267 MS.gene33055:CDS 35.0%
GCAAAAGGGGGTTATATATA+GGG + chr1.1:6648865-6648884 MS.gene33055:intron 35.0%
GGCAATTTGGATGTTGAAAT+CGG + chr1.1:6647269-6647288 MS.gene33055:CDS 35.0%
GGGAACATAAAAGTGATTTG+CGG - chr1.1:6650043-6650062 None:intergenic 35.0%
GTCAGTGAAAACAGTAGTTT+AGG + chr1.1:6647476-6647495 MS.gene33055:CDS 35.0%
GTGATATGAATCCCCATAAT+GGG - chr1.1:6647790-6647809 None:intergenic 35.0%
TCACCAATTAGCATCTGAAT+GGG - chr1.1:6647875-6647894 None:intergenic 35.0%
TGATATGAATCCCCATAATG+GGG - chr1.1:6647789-6647808 None:intergenic 35.0%
TGGGATATCATATCCATCAA+AGG - chr1.1:6647341-6647360 None:intergenic 35.0%
TGGTTATATATAGGGATGGA+GGG - chr1.1:6648619-6648638 None:intergenic 35.0%
TGTATCCAGATTTAAGCTGA+TGG + chr1.1:6647163-6647182 MS.gene33055:CDS 35.0%
TTGCTCTTATACTTTCGTTG+AGG - chr1.1:6651232-6651251 None:intergenic 35.0%
TTGGATTATACCCCATTATG+GGG + chr1.1:6647776-6647795 MS.gene33055:CDS 35.0%
! AGAGGATGAATGTCTCATTT+TGG + chr1.1:6650988-6651007 MS.gene33055:CDS 35.0%
! ATGCTAACTAAGACTTGGTT+TGG - chr1.1:6649166-6649185 None:intergenic 35.0%
! ATGGAATAAACCGGTGTTTT+AGG + chr1.1:6647906-6647925 MS.gene33055:CDS 35.0%
! ATGGGAATTTCTAAAAACCG+AGG - chr1.1:6647857-6647876 None:intergenic 35.0%
! CATCTGAAATTCTGAATCAG+TGG + chr1.1:6650062-6650081 MS.gene33055:intron 35.0%
! CCTAGATTTTCACATTAGCA+GGG - chr1.1:6648935-6648954 None:intergenic 35.0%
! GAACATAAAAGTGATTTGCG+GGG - chr1.1:6650041-6650060 None:intergenic 35.0%
! GACACACCTTAAACACTTTT+TGG - chr1.1:6649085-6649104 None:intergenic 35.0%
! GAGGTGTTTGTATCTTTGTT+TGG + chr1.1:6649651-6649670 MS.gene33055:intron 35.0%
! GGAACATAAAAGTGATTTGC+GGG - chr1.1:6650042-6650061 None:intergenic 35.0%
! GGTTTAATCCGAATTTTGTG+AGG - chr1.1:6649346-6649365 None:intergenic 35.0%
! GTTGTTGATTACTCAACTTC+TGG + chr1.1:6649884-6649903 MS.gene33055:intron 35.0%
! TCCTAGATTTTCACATTAGC+AGG - chr1.1:6648936-6648955 None:intergenic 35.0%
!! AACACTTTTTGGACATTGAG+GGG - chr1.1:6649074-6649093 None:intergenic 35.0%
!! CACTGATTCAGAATTTCAGA+TGG - chr1.1:6650064-6650083 None:intergenic 35.0%
!! CATTTCTTTGGAGTCTATGA+TGG + chr1.1:6647941-6647960 MS.gene33055:CDS 35.0%
!! CGGTATCTTTAGTTCTAAAG+AGG + chr1.1:6649744-6649763 MS.gene33055:intron 35.0%
!! GTGATTTTAGTACCTTCTAC+TGG + chr1.1:6650639-6650658 MS.gene33055:intron 35.0%
!! TTAAAGGTTGATGCAGAAGT+TGG + chr1.1:6648197-6648216 MS.gene33055:CDS 35.0%
!!! AAGAGGGATTTTGAGATTAG+AGG + chr1.1:6649761-6649780 MS.gene33055:intron 35.0%
AAAAGTCACTCAACCGGTAT+TGG + chr1.1:6647298-6647317 MS.gene33055:CDS 40.0%
AAGGAAAGTCTAATCGATGG+AGG + chr1.1:6648122-6648141 MS.gene33055:CDS 40.0%
AAGGGGGTTATATATAGGGA+CGG + chr1.1:6648869-6648888 MS.gene33055:intron 40.0%
AATCACATGCACAAGCAAGT+TGG - chr1.1:6650831-6650850 None:intergenic 40.0%
AGACCAAAGATCACTGTAGA+AGG + chr1.1:6650323-6650342 MS.gene33055:intron 40.0%
AGCTAAGGCTTCCAATGAAA+CGG + chr1.1:6647214-6647233 MS.gene33055:CDS 40.0%
ATCATCATCCTCACTTTCTG+GGG - chr1.1:6647402-6647421 None:intergenic 40.0%
ATCCAGATTTAAGCTGATGG+CGG + chr1.1:6647166-6647185 MS.gene33055:CDS 40.0%
ATTTCTCAGAGTCAGTCCAA+AGG + chr1.1:6650393-6650412 MS.gene33055:intron 40.0%
CAACATCACTGTGATTGTTG+TGG + chr1.1:6651198-6651217 MS.gene33055:CDS 40.0%
CAAGAACACCAAATACACGA+TGG - chr1.1:6648533-6648552 None:intergenic 40.0%
CAATGAAACGGTTGTAGGTT+CGG + chr1.1:6647226-6647245 MS.gene33055:CDS 40.0%
CCAAAGAAATGGGTCATTTG+AGG - chr1.1:6647932-6647951 None:intergenic 40.0%
CCCTGCTAATGTGAAAATCT+AGG + chr1.1:6648932-6648951 MS.gene33055:intron 40.0%
CCTCAAATGACCCATTTCTT+TGG + chr1.1:6647929-6647948 MS.gene33055:CDS 40.0%
CGAGGAAATAGAACTTGTCA+AGG + chr1.1:6648103-6648122 MS.gene33055:CDS 40.0%
CGAGGAATGAATTGAACTTC+TGG - chr1.1:6650962-6650981 None:intergenic 40.0%
CTGATTCAACTCCAATCTCT+GGG - chr1.1:6647676-6647695 None:intergenic 40.0%
GAATCATCATCCTCACTTTC+TGG - chr1.1:6647404-6647423 None:intergenic 40.0%
GACTTCCGAAATTAGTACAC+AGG - chr1.1:6649820-6649839 None:intergenic 40.0%
GAGTACCTGATGGAATAAAC+CGG + chr1.1:6647897-6647916 MS.gene33055:CDS 40.0%
GATAAAGACATGTGTCCTAC+GGG + chr1.1:6649579-6649598 MS.gene33055:intron 40.0%
GCATATTCATCTTCTCGGTT+CGG - chr1.1:6648468-6648487 None:intergenic 40.0%
GCGGGACAATATTGAGATTT+GGG + chr1.1:6650667-6650686 MS.gene33055:intron 40.0%
GGAAAAGTGATACAGTGGAA+TGG + chr1.1:6648507-6648526 MS.gene33055:CDS 40.0%
GTCAAGGAAAGTCTAATCGA+TGG + chr1.1:6648119-6648138 MS.gene33055:CDS 40.0%
GTGGTTATATATAGGGATGG+AGG - chr1.1:6648620-6648639 None:intergenic 40.0%
TAATTTCCTCTAGCAGCCTT+TGG - chr1.1:6650412-6650431 None:intergenic 40.0%
TATGCAAGAATTGAAGCAGC+CGG + chr1.1:6648483-6648502 MS.gene33055:CDS 40.0%
TCTGATTCAACTCCAATCTC+TGG - chr1.1:6647677-6647696 None:intergenic 40.0%
TCTGGATCCGGAATAATTGA+CGG - chr1.1:6650944-6650963 None:intergenic 40.0%
TGCGGGACAATATTGAGATT+TGG + chr1.1:6650666-6650685 MS.gene33055:intron 40.0%
TGGGGATTCATATCACTATG+TGG + chr1.1:6647794-6647813 MS.gene33055:CDS 40.0%
TGGGTGGTTATATATAGGGA+TGG - chr1.1:6648623-6648642 None:intergenic 40.0%
TGGTCATGCTAACTAAGACT+TGG - chr1.1:6649171-6649190 None:intergenic 40.0%
TGTTGTCTTTGCTTCCTTTC+TGG - chr1.1:6651183-6651202 None:intergenic 40.0%
TTCTTTGCCACGACAAAGAA+CGG - chr1.1:6648333-6648352 None:intergenic 40.0%
TTGCCTTCTACAGTGATCTT+TGG - chr1.1:6650329-6650348 None:intergenic 40.0%
TTGGATTTCGTGAATGTGAG+GGG + chr1.1:6650007-6650026 MS.gene33055:intron 40.0%
TTGGTACAAGAAAAACGGCA+TGG + chr1.1:6651081-6651100 MS.gene33055:CDS 40.0%
TTTCCTCGGTCAATGCAATA+TGG - chr1.1:6648091-6648110 None:intergenic 40.0%
TTTGGCTAGTGATGGTCTAT+GGG + chr1.1:6651006-6651025 MS.gene33055:CDS 40.0%
! ACAAACACCTCTAGGAGATT+AGG - chr1.1:6649642-6649661 None:intergenic 40.0%
! GCACAATGTTGAGAGTCTTT+TGG + chr1.1:6650572-6650591 MS.gene33055:intron 40.0%
! TCATTTGAGGCCTAAAACAC+CGG - chr1.1:6647919-6647938 None:intergenic 40.0%
! TCTCCTTCCTTTTCCAATAC+CGG - chr1.1:6647314-6647333 None:intergenic 40.0%
!! AAACACCGGTTTATTCCATC+AGG - chr1.1:6647905-6647924 None:intergenic 40.0%
!! ATAGGTGTAACAGGTTGGTT+TGG + chr1.1:6649260-6649279 MS.gene33055:intron 40.0%
!! TGTAACAGGTTGGTTTGGTT+CGG + chr1.1:6649265-6649284 MS.gene33055:intron 40.0%
!! TGTCCGGAGTGTTTTTGAAT+TGG + chr1.1:6647757-6647776 MS.gene33055:CDS 40.0%
!! TTTTGGCTAGTGATGGTCTA+TGG + chr1.1:6651005-6651024 MS.gene33055:CDS 40.0%
!!! TGTCTCATTTTGGCTAGTGA+TGG + chr1.1:6650998-6651017 MS.gene33055:CDS 40.0%
AAGATGGTTGCCAAGATCAG+TGG + chr1.1:6648150-6648169 MS.gene33055:CDS 45.0%
AAGATTCACTGCCACAGCAA+GGG - chr1.1:6647651-6647670 None:intergenic 45.0%
ACCGAGAAGAATGCCTACAA+AGG - chr1.1:6650192-6650211 None:intergenic 45.0%
AGAACCAATGGCGTTATCAG+TGG + chr1.1:6648349-6648368 MS.gene33055:CDS 45.0%
AGCTGATGAGCAACTGTAGA+AGG - chr1.1:6647707-6647726 None:intergenic 45.0%
ATCCGCCATCAGCTTAAATC+TGG - chr1.1:6647171-6647190 None:intergenic 45.0%
ATCGATGGAGGTCTCAAAGA+TGG + chr1.1:6648134-6648153 MS.gene33055:CDS 45.0%
ATGTGGACGAAGACCAGAAA+TGG + chr1.1:6647811-6647830 MS.gene33055:CDS 45.0%
ATTCATTCCTCGTGCGAAAG+AGG + chr1.1:6650970-6650989 MS.gene33055:CDS 45.0%
ATTTGACTCCCCCAAATCAG+CGG - chr1.1:6647603-6647622 None:intergenic 45.0%
CCCTTTGTAGGCATTCTTCT+CGG + chr1.1:6650188-6650207 MS.gene33055:intron 45.0%
CCGAGAAGAATGCCTACAAA+GGG - chr1.1:6650191-6650210 None:intergenic 45.0%
CGAACCTACAACCGTTTCAT+TGG - chr1.1:6647228-6647247 None:intergenic 45.0%
GAACGAGTGTAACAGTTGTC+CGG + chr1.1:6647741-6647760 MS.gene33055:CDS 45.0%
GAGCAACTGTAGAAGGCTTT+AGG - chr1.1:6647700-6647719 None:intergenic 45.0%
GCTTCCAATGAAACGGTTGT+AGG + chr1.1:6647221-6647240 MS.gene33055:CDS 45.0%
GGAAGCCTTAGCTACAGAAT+TGG - chr1.1:6647207-6647226 None:intergenic 45.0%
GGAAGGAGAAAGTCCTTTGA+TGG + chr1.1:6647325-6647344 MS.gene33055:CDS 45.0%
GGATGTGATGACAAACGAAG+AGG + chr1.1:6651027-6651046 MS.gene33055:CDS 45.0%
GGGTTATATATAGGGACGGA+GGG + chr1.1:6648873-6648892 MS.gene33055:intron 45.0%
GTACCTTCTACTGGTAGTTG+CGG + chr1.1:6650648-6650667 MS.gene33055:intron 45.0%
GTATGAAAAGAAGGGACGCA+AGG - chr1.1:6650447-6650466 None:intergenic 45.0%
GTGAATCTTGACCCAGAGAT+TGG + chr1.1:6647662-6647681 MS.gene33055:CDS 45.0%
TACCTTCTACTGGTAGTTGC+GGG + chr1.1:6650649-6650668 MS.gene33055:intron 45.0%
TATAAGAGCAACAACGGCAG+TGG - chr1.1:6648267-6648286 None:intergenic 45.0%
TATGAATGAACCCCTTGCTG+TGG + chr1.1:6647637-6647656 MS.gene33055:CDS 45.0%
TCTCCTGAAAATCACAGCGA+GGG - chr1.1:6650908-6650927 None:intergenic 45.0%
TGAAAATCACAGCGAGGGTA+AGG - chr1.1:6650903-6650922 None:intergenic 45.0%
TGGAATGGCCATCGTGTATT+TGG + chr1.1:6648522-6648541 MS.gene33055:CDS 45.0%
TTGTCGTGGCAAAGAACCAA+TGG + chr1.1:6648337-6648356 MS.gene33055:CDS 45.0%
! ATTGGTGATCGAGTACCTGA+TGG + chr1.1:6647887-6647906 MS.gene33055:CDS 45.0%
! CAACCGGTATTGGAAAAGGA+AGG + chr1.1:6647308-6647327 MS.gene33055:CDS 45.0%
! CACTCAACCGGTATTGGAAA+AGG + chr1.1:6647304-6647323 MS.gene33055:CDS 45.0%
! CATCCATATTGCATTGACCG+AGG + chr1.1:6648085-6648104 MS.gene33055:CDS 45.0%
! TTACCCTCGCTGTGATTTTC+AGG + chr1.1:6650902-6650921 MS.gene33055:intron 45.0%
! TTTGGAGTCTATGATGGCCA+TGG + chr1.1:6647947-6647966 MS.gene33055:CDS 45.0%
!! AAGGTTGATGCAGAAGTTGG+AGG + chr1.1:6648200-6648219 MS.gene33055:CDS 45.0%
!! CCACTGTATCACTTTTCCTC+CGG - chr1.1:6648505-6648524 None:intergenic 45.0%
!! GAAGTATACGTTTTCGAGCC+AGG - chr1.1:6651060-6651079 None:intergenic 45.0%
!!! GTTGGTTTGGTTCGGTTTTG+AGG + chr1.1:6649273-6649292 MS.gene33055:intron 45.0%
!!! ATTTTTATACTATTAAAATA+AGG + chr1.1:6649441-6649460 MS.gene33055:intron 5.0%
AAACGGCATGGAACTACCCT+CGG + chr1.1:6651093-6651112 MS.gene33055:CDS 50.0%
ACAGCGAGGGTAAGGAGAAA+TGG - chr1.1:6650895-6650914 None:intergenic 50.0%
ACGCAGTTGCAACTGTTCCT+CGG + chr1.1:6647837-6647856 MS.gene33055:CDS 50.0%
AGACACGCCTAATCTCCTAG+AGG + chr1.1:6649632-6649651 MS.gene33055:intron 50.0%
AGATTCACTGCCACAGCAAG+GGG - chr1.1:6647650-6647669 None:intergenic 50.0%
AGTTTACCTGAGAGCCACCA+TGG - chr1.1:6647967-6647986 None:intergenic 50.0%
ATGGAACTACCCTCGGAAAG+GGG + chr1.1:6651100-6651119 MS.gene33055:CDS 50.0%
CAAGATTCACTGCCACAGCA+AGG - chr1.1:6647652-6647671 None:intergenic 50.0%
CATGGAACTACCCTCGGAAA+GGG + chr1.1:6651099-6651118 MS.gene33055:CDS 50.0%
CATTCATCCTCTTTCGCACG+AGG - chr1.1:6650980-6650999 None:intergenic 50.0%
CCGGAGGAAAAGTGATACAG+TGG + chr1.1:6648502-6648521 MS.gene33055:CDS 50.0%
GCAACTGCGTCTTCCATTTC+TGG - chr1.1:6647827-6647846 None:intergenic 50.0%
GGGGTTATATATAGGGACGG+AGG + chr1.1:6648872-6648891 MS.gene33055:intron 50.0%
GTCTCCTGAAAATCACAGCG+AGG - chr1.1:6650909-6650928 None:intergenic 50.0%
GTTGGACACCAAACGTGTGT+CGG + chr1.1:6649603-6649622 MS.gene33055:intron 50.0%
GTTGTTGCGCCAGAAACTGT+TGG + chr1.1:6648239-6648258 MS.gene33055:CDS 50.0%
TCAAGAGCCGTTCTTTGTCG+TGG + chr1.1:6648323-6648342 MS.gene33055:CDS 50.0%
! AAACGAAGAGGTGTGTGACC+TGG + chr1.1:6651039-6651058 MS.gene33055:CDS 50.0%
! ACGATTAGCCCCAGAAAGTG+AGG + chr1.1:6647391-6647410 MS.gene33055:CDS 50.0%
! TGGTCCACTGATAACGCCAT+TGG - chr1.1:6648356-6648375 None:intergenic 50.0%
! TGTTGCTCACACCGCTGATT+TGG + chr1.1:6647589-6647608 MS.gene33055:CDS 50.0%
!! GTTGCTCACACCGCTGATTT+GGG + chr1.1:6647590-6647609 MS.gene33055:CDS 50.0%
!! TTAAGCTGATGGCGGATGCA+GGG + chr1.1:6647174-6647193 MS.gene33055:CDS 50.0%
!! TTGCTCACACCGCTGATTTG+GGG + chr1.1:6647591-6647610 MS.gene33055:CDS 50.0%
!! TTTAAGCTGATGGCGGATGC+AGG + chr1.1:6647173-6647192 MS.gene33055:CDS 50.0%
ACACTCGTTCCCTCTTCCTG+AGG - chr1.1:6647731-6647750 None:intergenic 55.0%
AGTTGCTCATCAGCTGCCTC+AGG + chr1.1:6647712-6647731 MS.gene33055:CDS 55.0%
CATCAGCTGCCTCAGGAAGA+GGG + chr1.1:6647719-6647738 MS.gene33055:CDS 55.0%
CTCTGTGTCCGACACACGTT+TGG - chr1.1:6649614-6649633 None:intergenic 55.0%
GACATGTGTCCTACGGGTGT+TGG + chr1.1:6649585-6649604 MS.gene33055:intron 55.0%
GCAAGAATTGAAGCAGCCGG+AGG + chr1.1:6648486-6648505 MS.gene33055:CDS 55.0%
GCAGTGGAGCCAACAGTTTC+TGG - chr1.1:6648251-6648270 None:intergenic 55.0%
GCATGGAACTACCCTCGGAA+AGG + chr1.1:6651098-6651117 MS.gene33055:CDS 55.0%
GGAGTCTATGATGGCCATGG+TGG + chr1.1:6647950-6647969 MS.gene33055:CDS 55.0%
GTCAGTCCAAAGGCTGCTAG+AGG + chr1.1:6650403-6650422 MS.gene33055:intron 55.0%
GTCCCGCAACTACCAGTAGA+AGG - chr1.1:6650654-6650673 None:intergenic 55.0%
TCATCAGCTGCCTCAGGAAG+AGG + chr1.1:6647718-6647737 MS.gene33055:CDS 55.0%
TCGAATCGCGCTCTCCAGAA+AGG + chr1.1:6651166-6651185 MS.gene33055:CDS 55.0%
!! GTTTGGTGTCCAACACCCGT+AGG - chr1.1:6649597-6649616 None:intergenic 55.0%
!! TGCTCACACCGCTGATTTGG+GGG + chr1.1:6647592-6647611 MS.gene33055:CDS 55.0%
ACTACCCTCGGAAAGGGGAG+AGG + chr1.1:6651105-6651124 MS.gene33055:CDS 60.0%
ACTACCCTCTCCCCTTTCCG+AGG - chr1.1:6651113-6651132 None:intergenic 60.0%
CAGGGTCAACGTGTCCGTGT+TGG - chr1.1:6648917-6648936 None:intergenic 60.0%
CTACCCTCGGAAAGGGGAGA+GGG + chr1.1:6651106-6651125 MS.gene33055:CDS 60.0%
CTACCCTCTCCCCTTTCCGA+GGG - chr1.1:6651112-6651131 None:intergenic 60.0%
GGGAGAGGGTAGTGATCCTG+CGG + chr1.1:6651120-6651139 MS.gene33055:CDS 60.0%
TGATGGCCATGGTGGCTCTC+AGG + chr1.1:6647958-6647977 MS.gene33055:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 6647158 6651258 6647158 ID=MS.gene33055
chr1.1 mRNA 6647158 6651258 6647158 ID=MS.gene33055.t1;Parent=MS.gene33055
chr1.1 exon 6647158 6647979 6647158 ID=MS.gene33055.t1.exon1;Parent=MS.gene33055.t1
chr1.1 CDS 6647158 6647979 6647158 ID=cds.MS.gene33055.t1;Parent=MS.gene33055.t1
chr1.1 exon 6648062 6648379 6648062 ID=MS.gene33055.t1.exon2;Parent=MS.gene33055.t1
chr1.1 CDS 6648062 6648379 6648062 ID=cds.MS.gene33055.t1;Parent=MS.gene33055.t1
chr1.1 exon 6648465 6648570 6648465 ID=MS.gene33055.t1.exon3;Parent=MS.gene33055.t1
chr1.1 CDS 6648465 6648570 6648465 ID=cds.MS.gene33055.t1;Parent=MS.gene33055.t1
chr1.1 exon 6650924 6651258 6650924 ID=MS.gene33055.t1.exon4;Parent=MS.gene33055.t1
chr1.1 CDS 6650924 6651258 6650924 ID=cds.MS.gene33055.t1;Parent=MS.gene33055.t1
Gene Sequence

>MS.gene33055

ATGGATGTATCCAGATTTAAGCTGATGGCGGATGCAGGGTCATTGTCCAATTCTGTAGCTAAGGCTTCCAATGAAACGGTTGTAGGTTCGGACGATTGTCATAATAAGAGTGGCAATTTGGATGTTGAAATCGGTATTACAAAAGTCACTCAACCGGTATTGGAAAAGGAAGGAGAAAGTCCTTTGATGGATATGATATCCCAAAATAAAAGTGTTTTAGTTGCTAGTGATGTACGATTAGCCCCAGAAAGTGAGGATGATGATTCATTATCATTGGAAGGTGAACAATTTATTGATAGCTCATGTTCTCTATCAGTTGTCAGTGAAAACAGTAGTTTAGGTGGAGAAGAGTTCATTGCTTCTGATAATACTTCAGAAGTTGGGACACCATGTTCGATAGACATAGAAAAGATCGTCAGTTCTGTCAATATTGTTGCTCACACCGCTGATTTGGGGGAGTCAAATGTTGACACAGATATTATGAATGAACCCCTTGCTGTGGCAGTGAATCTTGACCCAGAGATTGGAGTTGAATCAGACCTAAAGCCTTCTACAGTTGCTCATCAGCTGCCTCAGGAAGAGGGAACGAGTGTAACAGTTGTCCGGAGTGTTTTTGAATTGGATTATACCCCATTATGGGGATTCATATCACTATGTGGACGAAGACCAGAAATGGAAGACGCAGTTGCAACTGTTCCTCGGTTTTTAGAAATTCCCATTCAGATGCTAATTGGTGATCGAGTACCTGATGGAATAAACCGGTGTTTTAGGCCTCAAATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTAAACTTTAGTTATTACATGTCCGTTGATTTTAGCTTTGTCTGAATAAACTCTCACTTAGAGCTTAATTTTTCTCATTTAGGTTGCAAATTATTGTCGCGAACGCATCCATATTGCATTGACCGAGGAAATAGAACTTGTCAAGGAAAGTCTAATCGATGGAGGTCTCAAAGATGGTTGCCAAGATCAGTGGAAAAAAGTTTTCACCAATTGTTTCTTAAAGGTTGATGCAGAAGTTGGAGGAACGACTAATGATGAAGTTGTTGCGCCAGAAACTGTTGGCTCCACTGCCGTTGTTGCTCTTATATCTTCATCTCATATTATAGTTGCAAACTGTGGTGATTCAAGAGCCGTTCTTTGTCGTGGCAAAGAACCAATGGCGTTATCAGTGGACCATAAAGTAAGTTGCTTCTAGATATTCGTTTGAATCTTCTTTAAAAGAATTTATCTACTAATTGTTGTTTGAATTTTTTTATATATGCTAGCCGAACCGAGAAGATGAATATGCAAGAATTGAAGCAGCCGGAGGAAAAGTGATACAGTGGAATGGCCATCGTGTATTTGGTGTTCTTGCAATGTCAAGATCTATTGGTATGTTCTTTGTAATGATAAATTTTACTTCATTTGGATTCTACTCCCTCCATCCCTATATATAACCACCCATTTGACTAAAAAATTGTCCCTAAATATAAACCCCTTTTCAAATTACTAGATGCATTTATTAATTTATTCCTAAATATACCCCTAATTAATACTGCTAACTTATCTTGAAATATGAAAAGTCAAATTTAACACACATACAAACAAAGGATAATTTGGTAATATTAACACACAAAATAGACACATTAATTACATTAACAACTTTTCTTAAGAAATGTGAAAAAAGCAAAAGGGGGTTATATATAGGGACGGAGGGAGTATAAAATTACAAACTCCAACACGGACACGTTGACCCTGCTAATGTGAAAATCTAGGATGCTGACACCGATACATGCTTATTTATTATGATTAAATTAAATATGAATATTATTTATAAAATGTGCTTGCATCAAAATTGAGTAAAATGTTGTAATCAATTTTTTTGTCTTTAACCCCTCAATGTCCAAAAAGTGTTTAAGGTGTGTCGAAACAAAGAGAGAGAAAAAGTTGGACCCTTTTCTCTCTTCTCACTTTCTTCTTACAACCAAACCAAGTCTTAGTTAGCATGACCACTGAATGAATCTTTTGTTATAGTTTGATCTTTGATTGTCTCTTTTATTTGTAAGTTTATTCCATAAATTATAGGTGTAACAGGTTGGTTTGGTTCGGTTTTGAGGAGAAAATAAACCAGTACAAAATAATTGGTTTGGTTTTTATAATCTTTCCTCACAAAATTCGGATTAAACCAAATCGATGAAGAAACATTGATTTGGTTTGGATTAAAAATAAACATAAAAAGTAACTTTTATTCGAACATTATAGATTTTTATACTATTAAAATAAGGACATAAACTACAATGATTTTTTTGTTTGTTTATAGAATTGTCAAAAATTACATGAACAAAACACATTTTTAAGATAAAATTTAGGTTTAATTTCACTTTTTAGACACTCAACTCAGATAAAGACATGTGTCCTACGGGTGTTGGACACCAAACGTGTGTCGGACACAGAGACACGCCTAATCTCCTAGAGGTGTTTGTATCTTTGTTTGGTATTCTTTTAGTCAGTTATTTAGAGGGTGTGAGATGACACACTGTAAATGATTCAAAGGAGAGATTAGAGCGGTATCTTTAGTTCTAAAGAGGGATTTTGAGATTAGAGGTATCTTCTATAATCTGGTCCAGTTTATATCAATCCTGTGTACTAATTTCGGAAGTCTTCTAGTGAGAGTTGTTTTTCTTTTTTTAGGGATTCTAGTGAGAGTTGTTGATTACTCAACTTCTGGTCCAGTTTATATCAATCATGTGTACTAATTTAAGGGATAGTTGTGTACTTTATTAAGAAATGAATGGTGAGAGTATTTTCATGTTTTTCCTTTTAATTAATTGGATTTCGTGAATGTGAGGGGAATTGCTTCCCCGCAAATCACTTTTATGTTCCCATCTGAAATTCTGAATCAGTGGGAATGTCTTTCCATTTACTGCTTGTTAATCATCCTTGAATGTGGAAAACAAAAATTTCCATTTTGGTCCTAATTTTTTTAGAGCTTGAAAGATAACCTATTTTCCCTTTGTAGGCATTCTTCTCGGTTTATTGAATATGTATCCTGTTGAACATAAATGACAAATCTTGAACTATAAGATCATCTCCACTTTATTCTTAGTTTTTAGAATACTGCTTCTCTTATGTTTTGTTTAGTTGAGACCAAAGATCACTGTAGAAGGCAATTGAAATGAATAATTTGCATTTAGATGTCCAATTTAGTTTGATTATTTCTCAGAGTCAGTCCAAAGGCTGCTAGAGGAAATTATTTAGTACGATGCCTTGCGTCCCTTCTTTTCATACAGTATCCTTCTGTGTTTAACATTTTTCGTTCTATTCATATGAAAAGAAGATTTAGAACTTATTGGTTACAATTGCTATCTTAATATTTCTCATGATGGTGACTTTGCACAATGTTGAGAGTCTTTTGGAAAACAACATTTGTCATTGGATTGTCGCCATTCTGAATTTGCTAGTGATTTTAGTACCTTCTACTGGTAGTTGCGGGACAATATTGAGATTTGGGTCTTGAGTTCACCGTAGTTCTACAGAGAATCAAGTATTCAAGTTTAATTTTTTTATTTGAATGGAAAATGCACAAAATAGGCATTGATTTTGTTTGTGCTACAATTTTATTTTATTTTCTAATTCAAAACAATGATAACCAACTTGCTTGTGCATGTGATTGCGAGTCCCACAGTAATTGTGTTGTGTTTATTAGGATATAACCATTTCTCCTTACCCTCGCTGTGATTTTCAGGAGACAGATATTTGAAACCGTCAATTATTCCGGATCCAGAAGTTCAATTCATTCCTCGTGCGAAAGAGGATGAATGTCTCATTTTGGCTAGTGATGGTCTATGGGATGTGATGACAAACGAAGAGGTGTGTGACCTGGCTCGAAAACGTATACTTCTTTGGTACAAGAAAAACGGCATGGAACTACCCTCGGAAAGGGGAGAGGGTAGTGATCCTGCGGCACAAGCAGCAGCAGAATTGCTATCGAATCGCGCTCTCCAGAAAGGAAGCAAAGACAACATCACTGTGATTGTTGTGGATTTGAAACCTCAACGAAAGTATAAGAGCAAAACATGA
Protein sequence

>MS.gene33055.t1

MDVSRFKLMADAGSLSNSVAKASNETVVGSDDCHNKSGNLDVEIGITKVTQPVLEKEGESPLMDMISQNKSVLVASDVRLAPESEDDDSLSLEGEQFIDSSCSLSVVSENSSLGGEEFIASDNTSEVGTPCSIDIEKIVSSVNIVAHTADLGESNVDTDIMNEPLAVAVNLDPEIGVESDLKPSTVAHQLPQEEGTSVTVVRSVFELDYTPLWGFISLCGRRPEMEDAVATVPRFLEIPIQMLIGDRVPDGINRCFRPQMTHFFGVYDGHGGSQVANYCRERIHIALTEEIELVKESLIDGGLKDGCQDQWKKVFTNCFLKVDAEVGGTTNDEVVAPETVGSTAVVALISSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPSIIPDPEVQFIPRAKEDECLILASDGLWDVMTNEEVCDLARKRILLWYKKNGMELPSERGEGSDPAAQAAAELLSNRALQKGSKDNITVIVVDLKPQRKYKSKT