Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33305.t1 | XP_003589828.1 | 93.9 | 330 | 16 | 1 | 1 | 330 | 1 | 326 | 2.30E-138 | 501.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33305.t1 | Q92QG5 | 47.5 | 118 | 62 | 0 | 108 | 225 | 11 | 128 | 1.1e-19 | 99.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33305.t1 | G7IDE8 | 93.9 | 330 | 16 | 1 | 1 | 330 | 1 | 326 | 1.6e-138 | 501.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33305 | MS.gene91152 | PPI |
| MS.gene33305 | MS.gene026155 | PPI |
| MS.gene33305 | MS.gene88636 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33305.t1 | MTR_1g040020 | 94.848 | 330 | 13 | 1 | 1 | 330 | 1 | 326 | 0.0 | 635 |
| MS.gene33305.t1 | MTR_7g100410 | 28.030 | 132 | 88 | 1 | 91 | 222 | 66 | 190 | 6.52e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33305.t1 | AT4G28360 | 59.398 | 266 | 91 | 7 | 1 | 260 | 1 | 255 | 3.49e-95 | 283 |
| MS.gene33305.t1 | AT1G52370 | 57.252 | 262 | 104 | 4 | 1 | 261 | 1 | 255 | 8.55e-87 | 262 |
| MS.gene33305.t1 | AT1G52370 | 57.252 | 262 | 104 | 4 | 1 | 261 | 1 | 255 | 8.55e-87 | 262 |
| MS.gene33305.t1 | AT1G52370 | 57.252 | 262 | 104 | 4 | 1 | 261 | 1 | 255 | 8.55e-87 | 262 |
| MS.gene33305.t1 | AT1G52370 | 57.252 | 262 | 104 | 4 | 1 | 261 | 1 | 255 | 8.55e-87 | 262 |
| MS.gene33305.t1 | ATCG00810 | 31.818 | 110 | 75 | 0 | 111 | 220 | 12 | 121 | 1.02e-13 | 68.6 |
Find 72 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTTGTGCCTCTTCTTC+AGG | 0.198947 | 1.1:+24146951 | None:intergenic |
| GCAACCAAGTTGACCTTCTT+TGG | 0.202936 | 1.1:+24147661 | None:intergenic |
| GGTCAACTTGGTTGCTGCTT+TGG | 0.281050 | 1.1:-24147653 | MS.gene33305:CDS |
| TATTGAGACCACTCCTGTTT+GGG | 0.305553 | 1.1:-24146862 | MS.gene33305:CDS |
| AAACGAGACCACACCTGTTA+AGG | 0.357620 | 1.1:-24146718 | MS.gene33305:CDS |
| ATCACAAGACCACTCGTGTT+TGG | 0.368062 | 1.1:-24146770 | MS.gene33305:CDS |
| TTATTGAGACCACTCCTGTT+TGG | 0.371095 | 1.1:-24146863 | MS.gene33305:CDS |
| CAATTTGTGCCTCTTCTTCA+GGG | 0.384437 | 1.1:+24146952 | None:intergenic |
| TATTCTTCGTCGCATTCATA+AGG | 0.387617 | 1.1:-24151384 | MS.gene33305:CDS |
| AAACGAGACCACTCCTGTTT+GGG | 0.392516 | 1.1:-24146814 | MS.gene33305:CDS |
| AAAACGAGACCACTCCTGTT+TGG | 0.395474 | 1.1:-24146815 | MS.gene33305:CDS |
| TCACAAGACCACTCGTGTTT+GGG | 0.406538 | 1.1:-24146769 | MS.gene33305:CDS |
| AGATCTTCCTTTGCCATGGA+TGG | 0.415454 | 1.1:+24147028 | None:intergenic |
| AACGAGACCACACCTGTTAA+GGG | 0.417185 | 1.1:-24146717 | MS.gene33305:CDS |
| TTGGTTGCTGCTTTGGTTCG+TGG | 0.425968 | 1.1:-24147646 | MS.gene33305:CDS |
| ATCCATGGCAAAGGAAGATC+TGG | 0.427839 | 1.1:-24147026 | MS.gene33305:CDS |
| TTATGAATGCGACGAAGAAT+AGG | 0.431850 | 1.1:+24151386 | None:intergenic |
| GGAACTAAAGGCGATGAAAC+AGG | 0.435377 | 1.1:+24150123 | None:intergenic |
| GATTGTGAGAAGCGTTTGCT+CGG | 0.435749 | 1.1:+24147217 | None:intergenic |
| TTAGTTCCAGTTTCATCATT+CGG | 0.436163 | 1.1:-24150108 | MS.gene33305:CDS |
| AAATACGAAAGCTATTACTA+AGG | 0.437363 | 1.1:-24150064 | MS.gene33305:CDS |
| GAACTACCGAATGATGAAAC+TGG | 0.439490 | 1.1:+24150102 | None:intergenic |
| TCTTACAGCTGAAGCATTTG+TGG | 0.454900 | 1.1:-24147078 | MS.gene33305:intron |
| AAGGTTTGTAGCCGAATGAT+TGG | 0.455474 | 1.1:+24151349 | None:intergenic |
| ATTCTTCGTCGCATTCATAA+GGG | 0.459859 | 1.1:-24151383 | MS.gene33305:CDS |
| TATGAATGCGACGAAGAATA+GGG | 0.460626 | 1.1:+24151387 | None:intergenic |
| TATTGAAAACAGTGATCAAA+TGG | 0.462692 | 1.1:+24151139 | None:intergenic |
| CTTACAGCTGAAGCATTTGT+GGG | 0.464301 | 1.1:-24147077 | MS.gene33305:intron |
| ACAACAGTTAGCCTACATTC+TGG | 0.484826 | 1.1:+24146990 | None:intergenic |
| GATGCAGACCGCCTAATTGT+TGG | 0.485034 | 1.1:-24147186 | MS.gene33305:intron |
| AGCTGAAGCATTTGTGGGAA+AGG | 0.485918 | 1.1:-24147072 | MS.gene33305:CDS |
| TTCCAGATCTTCCTTTGCCA+TGG | 0.488317 | 1.1:+24147024 | None:intergenic |
| TTACAGAGGCAATGGTCAAA+AGG | 0.489573 | 1.1:-24151181 | MS.gene33305:CDS |
| GCAAACGCTTCTCACAATCA+TGG | 0.490598 | 1.1:-24147213 | MS.gene33305:CDS |
| AAGAAGAGAGTTTCCATCCA+TGG | 0.493272 | 1.1:-24147041 | MS.gene33305:CDS |
| GTTGCAAGTGTTAGTAAAGC+GGG | 0.502385 | 1.1:-24147596 | MS.gene33305:CDS |
| AATATTAAAGAAAATAAAGC+AGG | 0.507004 | 1.1:-24150025 | MS.gene33305:intron |
| CGCTTCTCACAATCATGGGT+TGG | 0.512404 | 1.1:-24147208 | MS.gene33305:CDS |
| TCAAATGGCCTTGAGATACT+TGG | 0.512474 | 1.1:+24151154 | None:intergenic |
| CAATCATGGTGCAGTGGCAG+AGG | 0.514969 | 1.1:-24151418 | None:intergenic |
| GCTGAAGCATTTGTGGGAAA+GGG | 0.521445 | 1.1:-24147071 | MS.gene33305:CDS |
| AATGATGAAACTGGAACTAA+AGG | 0.526148 | 1.1:+24150111 | None:intergenic |
| TCGTCGCATTCATAAGGGAC+TGG | 0.528816 | 1.1:-24151378 | MS.gene33305:CDS |
| ACTGGAGCCTGCCAATCATT+CGG | 0.535140 | 1.1:-24151360 | MS.gene33305:CDS |
| TTTGTAGCCGAATGATTGGC+AGG | 0.536529 | 1.1:+24151353 | None:intergenic |
| CTTTAAGAAGCTAACTAAGA+AGG | 0.537412 | 1.1:-24146910 | MS.gene33305:CDS |
| AGAGATTACCCCTGAAGAAG+AGG | 0.541074 | 1.1:-24146961 | MS.gene33305:CDS |
| CAGGAGTGGTCTCAATAAGC+TGG | 0.554575 | 1.1:+24146868 | None:intergenic |
| TGTATTTCAGAGTCCAAAGA+AGG | 0.555548 | 1.1:-24147674 | MS.gene33305:intron |
| AAGAAGAGGCACAAATTGCT+AGG | 0.562985 | 1.1:-24146947 | MS.gene33305:CDS |
| CAAACGCTTCTCACAATCAT+GGG | 0.566009 | 1.1:-24147212 | MS.gene33305:CDS |
| TAGGTCAGTTACAGAGGCAA+TGG | 0.576561 | 1.1:-24151189 | MS.gene33305:CDS |
| TCATCATTCGGTAGTTCACA+AGG | 0.579982 | 1.1:-24150096 | MS.gene33305:CDS |
| GAGTCCAAAGAAGGTCAACT+TGG | 0.587341 | 1.1:-24147665 | MS.gene33305:CDS |
| ATTGTGAGAAGCGTTTGCTC+GGG | 0.592593 | 1.1:+24147218 | None:intergenic |
| ATTGAGACCACTCCTGTTTG+GGG | 0.595488 | 1.1:-24146861 | MS.gene33305:CDS |
| TCATGCACAGACCAGAATGT+AGG | 0.597465 | 1.1:-24147001 | MS.gene33305:CDS |
| AACGAGAGTGATAAAGTGCA+AGG | 0.597474 | 1.1:+24151330 | None:intergenic |
| TAAGAAGCTAACTAAGAAGG+AGG | 0.597695 | 1.1:-24146907 | MS.gene33305:CDS |
| TCTCGTTCTTCTCTTTCACA+AGG | 0.601562 | 1.1:-24151314 | MS.gene33305:intron |
| AATTTGTGCCTCTTCTTCAG+GGG | 0.603280 | 1.1:+24146953 | None:intergenic |
| AGAGTTTCCATCCATGGCAA+AGG | 0.604435 | 1.1:-24147035 | MS.gene33305:CDS |
| GGCACAAATTGCTAGGCTGA+AGG | 0.607782 | 1.1:-24146940 | MS.gene33305:CDS |
| GTGGTCTCAATAAGCTGGTG+TGG | 0.608149 | 1.1:+24146873 | None:intergenic |
| AAGGTTTGCCAAGTATCTCA+AGG | 0.614639 | 1.1:-24151162 | MS.gene33305:CDS |
| AAGAAGCTAACTAAGAAGGA+GGG | 0.617043 | 1.1:-24146906 | MS.gene33305:CDS |
| AGAAAACAATCATGGTGCAG+TGG | 0.621743 | 1.1:-24151424 | None:intergenic |
| GTATTGTAGGTCAGTTACAG+AGG | 0.626522 | 1.1:-24151195 | MS.gene33305:intron |
| AAACACGAGTGGTCTTGTGA+TGG | 0.636084 | 1.1:+24146772 | None:intergenic |
| AGTTGCAAGTGTTAGTAAAG+CGG | 0.658625 | 1.1:-24147597 | MS.gene33305:CDS |
| AAATATTACCAACAATTAGG+CGG | 0.662377 | 1.1:+24147178 | None:intergenic |
| AAAAGCAAATCTATCCGTAG+GGG | 0.703221 | 1.1:-24146690 | MS.gene33305:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATATATTATATTTAA+TGG | + | chr1.1:24149866-24149885 | None:intergenic | 0.0% |
| !! | ACTAAATATAAATTAATTGA+AGG | - | chr1.1:24149003-24149022 | MS.gene33305:intron | 10.0% |
| !! | ATCTAACAATAAAATATATA+TGG | + | chr1.1:24150699-24150718 | None:intergenic | 10.0% |
| !! | CTAAATATAAATTAATTGAA+GGG | - | chr1.1:24149004-24149023 | MS.gene33305:intron | 10.0% |
| !! | AAAAAATATTACCAACAATT+AGG | + | chr1.1:24150882-24150901 | None:intergenic | 15.0% |
| !! | AAATAAAAGAATTTACATCT+TGG | - | chr1.1:24148591-24148610 | MS.gene33305:intron | 15.0% |
| !! | AATAAAAGAATTTACATCTT+GGG | - | chr1.1:24148592-24148611 | MS.gene33305:intron | 15.0% |
| !! | AATATTAAAGAAAATAAAGC+AGG | - | chr1.1:24148029-24148048 | MS.gene33305:intron | 15.0% |
| !! | GTATTTGTTTAAATTTAATG+TGG | - | chr1.1:24149694-24149713 | MS.gene33305:intron | 15.0% |
| !! | TAACAATAAAATATATATGG+CGG | + | chr1.1:24150696-24150715 | None:intergenic | 15.0% |
| !!! | AAATGTTTTCTCAAAATAAA+TGG | - | chr1.1:24147353-24147372 | MS.gene33305:intron | 15.0% |
| !!! | AATGTTTTCTCAAAATAAAT+GGG | - | chr1.1:24147354-24147373 | MS.gene33305:intron | 15.0% |
| !!! | ATTGTTTGTTAAATTCTTTT+TGG | - | chr1.1:24147482-24147501 | MS.gene33305:intron | 15.0% |
| !!! | CTTAAAATCCATATTTTTTA+TGG | - | chr1.1:24149566-24149585 | MS.gene33305:intron | 15.0% |
| !!! | TAAATTCAATTTTACACTAT+GGG | - | chr1.1:24148129-24148148 | MS.gene33305:intron | 15.0% |
| !!! | TCACAAAATATTATTTTTCA+AGG | - | chr1.1:24147453-24147472 | MS.gene33305:intron | 15.0% |
| !!! | TTAAATTCAATTTTACACTA+TGG | - | chr1.1:24148128-24148147 | MS.gene33305:intron | 15.0% |
| !!! | TTGTTTGTTAAATTCTTTTT+GGG | - | chr1.1:24147483-24147502 | MS.gene33305:intron | 15.0% |
| !! | AAATTAATTGAAGGGATATT+AGG | - | chr1.1:24149012-24149031 | MS.gene33305:intron | 20.0% |
| !! | AAGTTAAAGATTACATAAAG+TGG | + | chr1.1:24148280-24148299 | None:intergenic | 20.0% |
| !! | AATTAATTGAAGGGATATTA+GGG | - | chr1.1:24149013-24149032 | MS.gene33305:intron | 20.0% |
| !! | ACTTATCAAATTATTCACTA+AGG | - | chr1.1:24147234-24147253 | MS.gene33305:CDS | 20.0% |
| !! | ATAATTTGATAAGTTAAGAC+TGG | + | chr1.1:24147228-24147247 | None:intergenic | 20.0% |
| !! | CAACAACTAATATTTATTCA+GGG | - | chr1.1:24148691-24148710 | MS.gene33305:intron | 20.0% |
| !! | CTTATCAAATTATTCACTAA+GGG | - | chr1.1:24147235-24147254 | MS.gene33305:intron | 20.0% |
| !! | GAGGTTAAATACATAATTTA+TGG | - | chr1.1:24149928-24149947 | MS.gene33305:intron | 20.0% |
| !! | GTTAGTACTTTAAATAAATG+AGG | + | chr1.1:24149168-24149187 | None:intergenic | 20.0% |
| !! | GTTATTCTATTCTTCTTTAT+AGG | - | chr1.1:24150754-24150773 | MS.gene33305:intron | 20.0% |
| !! | TAAGCTCATGATTTAATATA+GGG | + | chr1.1:24148786-24148805 | None:intergenic | 20.0% |
| !! | TATATTATATTTAATGGCAC+CGG | + | chr1.1:24149860-24149879 | None:intergenic | 20.0% |
| !! | TCATCATTTAATGATTTAGA+TGG | - | chr1.1:24148243-24148262 | MS.gene33305:intron | 20.0% |
| !! | TTATTGTTAGATTTCATTTG+AGG | - | chr1.1:24150707-24150726 | MS.gene33305:intron | 20.0% |
| !! | TTTGCAATTAAAAGTGAAAA+TGG | - | chr1.1:24147329-24147348 | MS.gene33305:intron | 20.0% |
| !!! | AAAGTCTATTTGATGATTAT+AGG | + | chr1.1:24149395-24149414 | None:intergenic | 20.0% |
| !!! | AAGACTGGTTAAAATTAATT+GGG | + | chr1.1:24147213-24147232 | None:intergenic | 20.0% |
| !!! | AGACTAACTACTTTTTTAAT+AGG | + | chr1.1:24148903-24148922 | None:intergenic | 20.0% |
| !!! | ATAAAGAGAATAATGTGTTT+TGG | + | chr1.1:24148642-24148661 | None:intergenic | 20.0% |
| !!! | TAAAGTTTTATTCAAATTGC+AGG | - | chr1.1:24150801-24150820 | MS.gene33305:intron | 20.0% |
| !!! | TAAGACTGGTTAAAATTAAT+TGG | + | chr1.1:24147214-24147233 | None:intergenic | 20.0% |
| !!! | TTTATATTTAGTTCTTACCA+TGG | + | chr1.1:24148995-24149014 | None:intergenic | 20.0% |
| !!! | TTTTTGATTTCAATTGAAGA+AGG | - | chr1.1:24150732-24150751 | MS.gene33305:intron | 20.0% |
| ! | AAAAAAAAAAGAAAAGGGCT+AGG | + | chr1.1:24150621-24150640 | None:intergenic | 25.0% |
| ! | AAACAAGAAGTTATGTTTGT+TGG | + | chr1.1:24149096-24149115 | None:intergenic | 25.0% |
| ! | AAATACGAAAGCTATTACTA+AGG | - | chr1.1:24147990-24148009 | MS.gene33305:intron | 25.0% |
| ! | AAATATTACCAACAATTAGG+CGG | + | chr1.1:24150879-24150898 | None:intergenic | 25.0% |
| ! | ACATTATTCTCTTTATCTAC+AGG | - | chr1.1:24148646-24148665 | MS.gene33305:intron | 25.0% |
| ! | ACTAAACATGCTATTATTGT+AGG | - | chr1.1:24147576-24147595 | MS.gene33305:CDS | 25.0% |
| ! | AGAAGAATATGTTTGTATTC+AGG | - | chr1.1:24149621-24149640 | MS.gene33305:intron | 25.0% |
| ! | AGATATAATAACACTAACAC+AGG | + | chr1.1:24147782-24147801 | None:intergenic | 25.0% |
| ! | ATTTACATCTTGGGTAAAAT+TGG | - | chr1.1:24148601-24148620 | MS.gene33305:intron | 25.0% |
| ! | CAATCCTGAAAAATTGATAA+TGG | - | chr1.1:24148189-24148208 | MS.gene33305:intron | 25.0% |
| ! | CAATTCACTCAATAAATTAG+GGG | - | chr1.1:24148752-24148771 | MS.gene33305:intron | 25.0% |
| ! | CTAAGCTCATGATTTAATAT+AGG | + | chr1.1:24148787-24148806 | None:intergenic | 25.0% |
| ! | CTACAATACCAAAAATAAAG+CGG | + | chr1.1:24146848-24146867 | None:intergenic | 25.0% |
| ! | GCAACAACTAATATTTATTC+AGG | - | chr1.1:24148690-24148709 | MS.gene33305:intron | 25.0% |
| ! | GCAATTCACTCAATAAATTA+GGG | - | chr1.1:24148751-24148770 | MS.gene33305:intron | 25.0% |
| ! | TACTTTAAATAAATGAGGCT+AGG | + | chr1.1:24149163-24149182 | None:intergenic | 25.0% |
| ! | TATAGTAGAAAGAGATGAAA+GGG | + | chr1.1:24149301-24149320 | None:intergenic | 25.0% |
| ! | TATTGAAAACAGTGATCAAA+TGG | + | chr1.1:24146918-24146937 | None:intergenic | 25.0% |
| ! | TGCAATTCACTCAATAAATT+AGG | - | chr1.1:24148750-24148769 | MS.gene33305:intron | 25.0% |
| ! | TTATAGTAGAAAGAGATGAA+AGG | + | chr1.1:24149302-24149321 | None:intergenic | 25.0% |
| ! | TTCCTGTATGTTTGAAAATA+AGG | - | chr1.1:24147300-24147319 | MS.gene33305:intron | 25.0% |
| !! | ATCCAATATACTTGTTAAAG+TGG | - | chr1.1:24149726-24149745 | MS.gene33305:intron | 25.0% |
| !! | ATTTGTGTTATTCTGTTTCA+GGG | - | chr1.1:24147862-24147881 | MS.gene33305:intron | 25.0% |
| !! | CATTCCATTATCAATTTTTC+AGG | + | chr1.1:24148196-24148215 | None:intergenic | 25.0% |
| !! | TAATCAGTGTTGAAAATCAT+GGG | + | chr1.1:24147065-24147084 | None:intergenic | 25.0% |
| !! | TATTTGTGTTATTCTGTTTC+AGG | - | chr1.1:24147861-24147880 | MS.gene33305:intron | 25.0% |
| !! | TCCAATATACTTGTTAAAGT+GGG | - | chr1.1:24149727-24149746 | MS.gene33305:intron | 25.0% |
| !! | TGGTAACATCAAATCAATTT+TGG | + | chr1.1:24147155-24147174 | None:intergenic | 25.0% |
| !! | TTCTTGTTTATATTTGAGAC+TGG | - | chr1.1:24149107-24149126 | MS.gene33305:intron | 25.0% |
| !!! | AATTCTTTTTGGGAACATTA+AGG | - | chr1.1:24147493-24147512 | MS.gene33305:intron | 25.0% |
| !!! | AGATGAATTTTTTAGCAACT+GGG | + | chr1.1:24147902-24147921 | None:intergenic | 25.0% |
| !!! | GATTATTTTGGTTTTCTTGT+AGG | - | chr1.1:24148085-24148104 | MS.gene33305:intron | 25.0% |
| !!! | TGTTCAGATAGATTGTTTTT+TGG | - | chr1.1:24149524-24149543 | MS.gene33305:intron | 25.0% |
| AAAAAGCAAATCTATCCGTA+GGG | - | chr1.1:24151363-24151382 | MS.gene33305:CDS | 30.0% | |
| AAATCACAGCTGGAAAAAAA+TGG | + | chr1.1:24147175-24147194 | None:intergenic | 30.0% | |
| AACCAATACAACAATGATGA+TGG | + | chr1.1:24146967-24146986 | None:intergenic | 30.0% | |
| AACCATCATCATTGTTGTAT+TGG | - | chr1.1:24146962-24146981 | MS.gene33305:CDS | 30.0% | |
| AACTAACCAAATCACAATCT+TGG | - | chr1.1:24147745-24147764 | MS.gene33305:intron | 30.0% | |
| AATGATGAAACTGGAACTAA+AGG | + | chr1.1:24147946-24147965 | None:intergenic | 30.0% | |
| AATTGCTTTCTAAGTTCTTC+TGG | - | chr1.1:24150563-24150582 | MS.gene33305:intron | 30.0% | |
| ACGCTCAACCATAAAAAATA+TGG | + | chr1.1:24149577-24149596 | None:intergenic | 30.0% | |
| ACTAACCAAATCACAATCTT+GGG | - | chr1.1:24147746-24147765 | MS.gene33305:intron | 30.0% | |
| ACTGACACTATTACAAAAAG+TGG | - | chr1.1:24147405-24147424 | MS.gene33305:intron | 30.0% | |
| AGTGCTCAATATGATAGATT+AGG | - | chr1.1:24148719-24148738 | MS.gene33305:intron | 30.0% | |
| ATTGCTTTCTAAGTTCTTCT+GGG | - | chr1.1:24150564-24150583 | MS.gene33305:intron | 30.0% | |
| GACAGAATAATAACTAGTGT+TGG | + | chr1.1:24150507-24150526 | None:intergenic | 30.0% | |
| GTGCTCAATATGATAGATTA+GGG | - | chr1.1:24148720-24148739 | MS.gene33305:intron | 30.0% | |
| GTTGCTAAAAAATTCATCTG+AGG | - | chr1.1:24147903-24147922 | MS.gene33305:intron | 30.0% | |
| TATCTACAGGTATAAGCTAA+AGG | - | chr1.1:24148659-24148678 | MS.gene33305:intron | 30.0% | |
| TCAAGTTTGTAAGGGTTTAT+GGG | - | chr1.1:24146819-24146838 | MS.gene33305:CDS | 30.0% | |
| TCAATATGATAGATTAGGGT+GGG | - | chr1.1:24148724-24148743 | MS.gene33305:intron | 30.0% | |
| TCATCAGAAAAGAGAAAACA+AGG | + | chr1.1:24150941-24150960 | None:intergenic | 30.0% | |
| TCCCACTTTAACAAGTATAT+TGG | + | chr1.1:24149731-24149750 | None:intergenic | 30.0% | |
| TTAGTTCCAGTTTCATCATT+CGG | - | chr1.1:24147946-24147965 | MS.gene33305:intron | 30.0% | |
| ! | AACAATTTTCGCAGATGATT+TGG | - | chr1.1:24150259-24150278 | MS.gene33305:intron | 30.0% |
| ! | ACAAAAAGTGGAAATGCTTT+TGG | - | chr1.1:24147417-24147436 | MS.gene33305:intron | 30.0% |
| ! | ACGAGTTATTCAAGTTTGTA+AGG | - | chr1.1:24146810-24146829 | MS.gene33305:CDS | 30.0% |
| ! | ACTGATTAGTTCACAAGTTT+GGG | - | chr1.1:24147077-24147096 | MS.gene33305:intron | 30.0% |
| ! | ATTTTCCAAATTATCCCTCA+TGG | - | chr1.1:24148960-24148979 | MS.gene33305:intron | 30.0% |
| ! | CGAGTTATTCAAGTTTGTAA+GGG | - | chr1.1:24146811-24146830 | MS.gene33305:CDS | 30.0% |
| ! | CTAATCAGTGTTGAAAATCA+TGG | + | chr1.1:24147066-24147085 | None:intergenic | 30.0% |
| ! | CTCTGGAAACTCAAAATTTA+TGG | - | chr1.1:24150330-24150349 | MS.gene33305:intron | 30.0% |
| ! | CTTTAAGAAGCTAACTAAGA+AGG | - | chr1.1:24151144-24151163 | MS.gene33305:CDS | 30.0% |
| ! | TGATCACTGTTTTCAATATC+AGG | - | chr1.1:24146920-24146939 | MS.gene33305:CDS | 30.0% |
| ! | TGTTTATATTTGAGACTGGA+GGG | - | chr1.1:24149111-24149130 | MS.gene33305:intron | 30.0% |
| ! | TTCAAGTTTGTAAGGGTTTA+TGG | - | chr1.1:24146818-24146837 | MS.gene33305:CDS | 30.0% |
| ! | TTGTTTATATTTGAGACTGG+AGG | - | chr1.1:24149110-24149129 | MS.gene33305:intron | 30.0% |
| ! | TTTTCCAAATTATCCCTCAT+GGG | - | chr1.1:24148961-24148980 | MS.gene33305:intron | 30.0% |
| ! | TTTTCGTGTTATCGTTGTTT+AGG | - | chr1.1:24149672-24149691 | MS.gene33305:intron | 30.0% |
| !! | AAGATTGTGATTTGGTTAGT+TGG | + | chr1.1:24147746-24147765 | None:intergenic | 30.0% |
| !! | CTACTATAATCCTTTGAAAC+AGG | - | chr1.1:24149313-24149332 | MS.gene33305:intron | 30.0% |
| !! | TTTTCTCTTTTCTGATGATG+CGG | - | chr1.1:24150943-24150962 | MS.gene33305:intron | 30.0% |
| !!! | ATGCTCTTGATGGATTATTT+TGG | - | chr1.1:24148073-24148092 | MS.gene33305:intron | 30.0% |
| !!! | CACCTTATTTTCAAACATAC+AGG | + | chr1.1:24147305-24147324 | None:intergenic | 30.0% |
| !!! | CAGATGAATTTTTTAGCAAC+TGG | + | chr1.1:24147903-24147922 | None:intergenic | 30.0% |
| !!! | CGCTTTATTTTTGGTATTGT+AGG | - | chr1.1:24146846-24146865 | MS.gene33305:CDS | 30.0% |
| !!! | GATGGCTAGATTTGTTTTTT+CGG | + | chr1.1:24151267-24151286 | None:intergenic | 30.0% |
| !!! | TACGGATAGATTTGCTTTTT+CGG | + | chr1.1:24151363-24151382 | None:intergenic | 30.0% |
| AAAAGAGGGAATAATGTGAG+TGG | + | chr1.1:24150116-24150135 | None:intergenic | 35.0% | |
| AAAAGCAAATCTATCCGTAG+GGG | - | chr1.1:24151364-24151383 | MS.gene33305:CDS | 35.0% | |
| AAGAAGCTAACTAAGAAGGA+GGG | - | chr1.1:24151148-24151167 | MS.gene33305:CDS | 35.0% | |
| AGAGCAATCAAGATCTACAA+GGG | + | chr1.1:24150314-24150333 | None:intergenic | 35.0% | |
| AGTAGTACATAAATCACAGC+TGG | + | chr1.1:24147185-24147204 | None:intergenic | 35.0% | |
| AGTGTCAGTAAGAATCTCAT+AGG | + | chr1.1:24147394-24147413 | None:intergenic | 35.0% | |
| AGTTGCAAGTGTTAGTAAAG+CGG | - | chr1.1:24150457-24150476 | MS.gene33305:intron | 35.0% | |
| ATTCTTCGTCGCATTCATAA+GGG | - | chr1.1:24146671-24146690 | MS.gene33305:CDS | 35.0% | |
| ATTGTGAAGAGAAAGCAAGA+GGG | + | chr1.1:24150085-24150104 | None:intergenic | 35.0% | |
| CAAGTTTGTAAGGGTTTATG+GGG | - | chr1.1:24146820-24146839 | MS.gene33305:CDS | 35.0% | |
| CAATATGATAGATTAGGGTG+GGG | - | chr1.1:24148725-24148744 | MS.gene33305:intron | 35.0% | |
| CTCAATATGATAGATTAGGG+TGG | - | chr1.1:24148723-24148742 | MS.gene33305:intron | 35.0% | |
| GAAAAAGCAAATCTATCCGT+AGG | - | chr1.1:24151362-24151381 | MS.gene33305:CDS | 35.0% | |
| GGCTTCAAAAACTGTATATC+AGG | - | chr1.1:24150479-24150498 | MS.gene33305:intron | 35.0% | |
| GTTCTAGTGTTGTCAAATAG+TGG | - | chr1.1:24146984-24147003 | MS.gene33305:CDS | 35.0% | |
| TAAGAAGCTAACTAAGAAGG+AGG | - | chr1.1:24151147-24151166 | MS.gene33305:CDS | 35.0% | |
| TAAGCAGTTGAATCCAAAAC+TGG | + | chr1.1:24149550-24149569 | None:intergenic | 35.0% | |
| TATGAATGCGACGAAGAATA+GGG | + | chr1.1:24146670-24146689 | None:intergenic | 35.0% | |
| TATTCTTCGTCGCATTCATA+AGG | - | chr1.1:24146670-24146689 | MS.gene33305:CDS | 35.0% | |
| TGGTGGAATTGTACCAATTA+CGG | + | chr1.1:24149275-24149294 | None:intergenic | 35.0% | |
| TGTATTTCAGAGTCCAAAGA+AGG | - | chr1.1:24150380-24150399 | MS.gene33305:intron | 35.0% | |
| TTATCTCTTCATGCTCTTGA+TGG | - | chr1.1:24148063-24148082 | MS.gene33305:intron | 35.0% | |
| TTATGAATGCGACGAAGAAT+AGG | + | chr1.1:24146671-24146690 | None:intergenic | 35.0% | |
| TTGCGTTTATATGAGATCAG+AGG | + | chr1.1:24148862-24148881 | None:intergenic | 35.0% | |
| TTGCTTTCTAAGTTCTTCTG+GGG | - | chr1.1:24150565-24150584 | MS.gene33305:intron | 35.0% | |
| ! | AAAGTGGAAATGCTTTTGGT+TGG | - | chr1.1:24147421-24147440 | MS.gene33305:intron | 35.0% |
| ! | AGAAAGAGATGAAAGGGTAT+TGG | + | chr1.1:24149295-24149314 | None:intergenic | 35.0% |
| ! | ATCAAGAGCATGAAGAGATA+AGG | + | chr1.1:24148064-24148083 | None:intergenic | 35.0% |
| ! | CACTGATTAGTTCACAAGTT+TGG | - | chr1.1:24147076-24147095 | MS.gene33305:intron | 35.0% |
| ! | CTGATTAGTTCACAAGTTTG+GGG | - | chr1.1:24147078-24147097 | MS.gene33305:intron | 35.0% |
| ! | TATTTAATGGCACCGGATTA+TGG | + | chr1.1:24149853-24149872 | None:intergenic | 35.0% |
| ! | TTGGGACTTTGTTAGTTTGA+AGG | - | chr1.1:24150656-24150675 | MS.gene33305:intron | 35.0% |
| !! | AGGTTTTCCTTTGAGAAAAG+CGG | + | chr1.1:24148347-24148366 | None:intergenic | 35.0% |
| !! | TGTTTTTCCGCTTTTCTCAA+AGG | - | chr1.1:24148337-24148356 | MS.gene33305:intron | 35.0% |
| !!! | GACGGCTAGATTTGTTTTTT+CGG | + | chr1.1:24151390-24151409 | None:intergenic | 35.0% |
| !!! | GATTGTTTTTTGGCCAGTTT+TGG | - | chr1.1:24149534-24149553 | MS.gene33305:intron | 35.0% |
| !!! | TTATTTTTTCGTCCCCAAAC+AGG | + | chr1.1:24151208-24151227 | None:intergenic | 35.0% |
| AAAAAGAAAAGGGCTAGGAG+TGG | + | chr1.1:24150616-24150635 | None:intergenic | 40.0% | |
| AAATTACACTAGCGTGCAGA+CGG | - | chr1.1:24148301-24148320 | MS.gene33305:intron | 40.0% | |
| AACGAGAGTGATAAAGTGCA+AGG | + | chr1.1:24146727-24146746 | None:intergenic | 40.0% | |
| AAGAAGAGAGTTTCCATCCA+TGG | - | chr1.1:24151013-24151032 | MS.gene33305:intron | 40.0% | |
| AAGGTTTGCCAAGTATCTCA+AGG | - | chr1.1:24146892-24146911 | MS.gene33305:CDS | 40.0% | |
| AAGGTTTGTAGCCGAATGAT+TGG | + | chr1.1:24146708-24146727 | None:intergenic | 40.0% | |
| AATTTGTGCCTCTTCTTCAG+GGG | + | chr1.1:24151104-24151123 | None:intergenic | 40.0% | |
| AGTTCACAAGTTTGGGGATT+TGG | - | chr1.1:24147084-24147103 | MS.gene33305:intron | 40.0% | |
| AGTTCCCATGAGGGATAATT+TGG | + | chr1.1:24148968-24148987 | None:intergenic | 40.0% | |
| ATACGCACAATGATGGTATC+AGG | + | chr1.1:24149995-24150014 | None:intergenic | 40.0% | |
| ATTGGGAATGGGAGAAAAAG+AGG | + | chr1.1:24150131-24150150 | None:intergenic | 40.0% | |
| CAAACGCTTCTCACAATCAT+GGG | - | chr1.1:24150842-24150861 | MS.gene33305:intron | 40.0% | |
| CAATTTGTGCCTCTTCTTCA+GGG | + | chr1.1:24151105-24151124 | None:intergenic | 40.0% | |
| CAGAGCAATCAAGATCTACA+AGG | + | chr1.1:24150315-24150334 | None:intergenic | 40.0% | |
| CATGGAATAAGTTCCCATGA+GGG | + | chr1.1:24148977-24148996 | None:intergenic | 40.0% | |
| CATTGTGAAGAGAAAGCAAG+AGG | + | chr1.1:24150086-24150105 | None:intergenic | 40.0% | |
| CGCAGTTTCTCAAAGTAAAC+AGG | + | chr1.1:24147261-24147280 | None:intergenic | 40.0% | |
| CTTGTAGATCTTGATTGCTC+TGG | - | chr1.1:24150313-24150332 | MS.gene33305:intron | 40.0% | |
| GAACTACCGAATGATGAAAC+TGG | + | chr1.1:24147955-24147974 | None:intergenic | 40.0% | |
| GAAGGGGATACAATCATGAA+AGG | + | chr1.1:24149446-24149465 | None:intergenic | 40.0% | |
| GATACCATCATTGTGCGTAT+GGG | - | chr1.1:24149995-24150014 | MS.gene33305:intron | 40.0% | |
| GTATTGTAGGTCAGTTACAG+AGG | - | chr1.1:24146859-24146878 | MS.gene33305:CDS | 40.0% | |
| GTCGTGATAAAAGTCAACAG+AGG | + | chr1.1:24148367-24148386 | None:intergenic | 40.0% | |
| GTTGCAAGTGTTAGTAAAGC+GGG | - | chr1.1:24150458-24150477 | MS.gene33305:intron | 40.0% | |
| TACAAGCAGTTACACCTGAA+GGG | + | chr1.1:24149463-24149482 | None:intergenic | 40.0% | |
| TATTGAGACCACTCCTGTTT+GGG | - | chr1.1:24151192-24151211 | MS.gene33305:intron | 40.0% | |
| TCATCATTCGGTAGTTCACA+AGG | - | chr1.1:24147958-24147977 | MS.gene33305:intron | 40.0% | |
| TCTCGTTCTTCTCTTTCACA+AGG | - | chr1.1:24146740-24146759 | MS.gene33305:CDS | 40.0% | |
| TGATACCATCATTGTGCGTA+TGG | - | chr1.1:24149994-24150013 | MS.gene33305:intron | 40.0% | |
| TGGAATTGTACCAATTACGG+AGG | + | chr1.1:24149272-24149291 | None:intergenic | 40.0% | |
| TGTGACCCAAGATTGTGATT+TGG | + | chr1.1:24147754-24147773 | None:intergenic | 40.0% | |
| TTAACCTCTGTAACAAGTCC+CGG | + | chr1.1:24149916-24149935 | None:intergenic | 40.0% | |
| TTACAAGCAGTTACACCTGA+AGG | + | chr1.1:24149464-24149483 | None:intergenic | 40.0% | |
| TTACAGAGGCAATGGTCAAA+AGG | - | chr1.1:24146873-24146892 | MS.gene33305:CDS | 40.0% | |
| TTATTGAGACCACTCCTGTT+TGG | - | chr1.1:24151191-24151210 | MS.gene33305:intron | 40.0% | |
| TTCATGATTGTATCCCCTTC+AGG | - | chr1.1:24149446-24149465 | MS.gene33305:intron | 40.0% | |
| TTGCTTCTGACAAAAGTGAG+AGG | + | chr1.1:24148811-24148830 | None:intergenic | 40.0% | |
| TTGGGAATGGGAGAAAAAGA+GGG | + | chr1.1:24150130-24150149 | None:intergenic | 40.0% | |
| TTGTGAAGAGAAAGCAAGAG+GGG | + | chr1.1:24150084-24150103 | None:intergenic | 40.0% | |
| ! | AACTGCGTTCTGTTTTCTGT+CGG | - | chr1.1:24147274-24147293 | MS.gene33305:intron | 40.0% |
| ! | AAGAAGAGGCACAAATTGCT+AGG | - | chr1.1:24151107-24151126 | MS.gene33305:intron | 40.0% |
| ! | ACAACAGTTAGCCTACATTC+TGG | + | chr1.1:24151067-24151086 | None:intergenic | 40.0% |
| ! | CTTACAGCTGAAGCATTTGT+GGG | - | chr1.1:24150977-24150996 | MS.gene33305:intron | 40.0% |
| ! | GGTTTTCTTGTAGGCATGAT+TGG | - | chr1.1:24148094-24148113 | MS.gene33305:intron | 40.0% |
| ! | GTTTGGGGATTTGGTTTAGT+TGG | - | chr1.1:24147093-24147112 | MS.gene33305:intron | 40.0% |
| ! | TCAAATGGCCTTGAGATACT+TGG | + | chr1.1:24146903-24146922 | None:intergenic | 40.0% |
| ! | TCTTACAGCTGAAGCATTTG+TGG | - | chr1.1:24150976-24150995 | MS.gene33305:intron | 40.0% |
| !! | AAGAGATGAAAGGGTATTGG+TGG | + | chr1.1:24149292-24149311 | None:intergenic | 40.0% |
| !! | CACATTTTAGCCTCCGTAAT+TGG | - | chr1.1:24149259-24149278 | MS.gene33305:intron | 40.0% |
| !!! | ATGGGGAACCGCTTTATTTT+TGG | - | chr1.1:24146837-24146856 | MS.gene33305:CDS | 40.0% |
| !!! | ATTTGTTTTTTCGGCCCCTA+CGG | + | chr1.1:24151381-24151400 | None:intergenic | 40.0% |
| !!! | TTGTTTTTTCGGTCCCAAAC+AGG | + | chr1.1:24151256-24151275 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCCCAAACACGAG+TGG | + | chr1.1:24151296-24151315 | None:intergenic | 40.0% |
| AAAACGAGACCACTCCTGTT+TGG | - | chr1.1:24151239-24151258 | MS.gene33305:intron | 45.0% | |
| AAACGAGACCACACCTGTTA+AGG | - | chr1.1:24151336-24151355 | MS.gene33305:CDS | 45.0% | |
| AAACGAGACCACTCCTGTTT+GGG | - | chr1.1:24151240-24151259 | MS.gene33305:intron | 45.0% | |
| AAAGGGCTAGGAGTGGAAAA+AGG | + | chr1.1:24150609-24150628 | None:intergenic | 45.0% | |
| AACGAAGCTTGGAGAAAAGC+GGG | + | chr1.1:24150177-24150196 | None:intergenic | 45.0% | |
| AACGAGACCACACCTGTTAA+GGG | - | chr1.1:24151337-24151356 | MS.gene33305:CDS | 45.0% | |
| AAGGGCTAGGAGTGGAAAAA+GGG | + | chr1.1:24150608-24150627 | None:intergenic | 45.0% | |
| AATTACACTAGCGTGCAGAC+GGG | - | chr1.1:24148302-24148321 | MS.gene33305:intron | 45.0% | |
| ACAAGCAGTTACACCTGAAG+GGG | + | chr1.1:24149462-24149481 | None:intergenic | 45.0% | |
| ACAAGTAGCTTCACTAGGAG+TGG | - | chr1.1:24149752-24149771 | MS.gene33305:intron | 45.0% | |
| AGAGATTACCCCTGAAGAAG+AGG | - | chr1.1:24151093-24151112 | MS.gene33305:intron | 45.0% | |
| AGAGTCTGTGCATAACCAAC+CGG | + | chr1.1:24149228-24149247 | None:intergenic | 45.0% | |
| AGAGTTTCCATCCATGGCAA+AGG | - | chr1.1:24151019-24151038 | MS.gene33305:intron | 45.0% | |
| AGATCTTCCTTTGCCATGGA+TGG | + | chr1.1:24151029-24151048 | None:intergenic | 45.0% | |
| ATCACAAGACCACTCGTGTT+TGG | - | chr1.1:24151284-24151303 | MS.gene33305:intron | 45.0% | |
| ATCCATGGCAAAGGAAGATC+TGG | - | chr1.1:24151028-24151047 | MS.gene33305:intron | 45.0% | |
| ATTGAGACCACTCCTGTTTG+GGG | - | chr1.1:24151193-24151212 | MS.gene33305:intron | 45.0% | |
| CAACGAAGCTTGGAGAAAAG+CGG | + | chr1.1:24150178-24150197 | None:intergenic | 45.0% | |
| CAGAGAAGGGAATTGGGAAT+GGG | + | chr1.1:24150142-24150161 | None:intergenic | 45.0% | |
| CATCATTGTGCGTATGGGAA+TGG | - | chr1.1:24150000-24150019 | MS.gene33305:intron | 45.0% | |
| CATTCCCATACGCACAATGA+TGG | + | chr1.1:24150002-24150021 | None:intergenic | 45.0% | |
| CCATGGAATAAGTTCCCATG+AGG | + | chr1.1:24148978-24148997 | None:intergenic | 45.0% | |
| CCTCATGGGAACTTATTCCA+TGG | - | chr1.1:24148975-24148994 | MS.gene33305:intron | 45.0% | |
| CGTGCTCATCATACTTGAAG+TGG | + | chr1.1:24149826-24149845 | None:intergenic | 45.0% | |
| CTACAGTATGATTCGTCACC+CGG | - | chr1.1:24149894-24149913 | MS.gene33305:intron | 45.0% | |
| CTTCAAGTATGATGAGCACG+TGG | - | chr1.1:24149826-24149845 | MS.gene33305:intron | 45.0% | |
| GAAGTGCAGAGAAGGGAATT+GGG | + | chr1.1:24150148-24150167 | None:intergenic | 45.0% | |
| GAGTCCAAAGAAGGTCAACT+TGG | - | chr1.1:24150389-24150408 | MS.gene33305:intron | 45.0% | |
| GCAAACGCTTCTCACAATCA+TGG | - | chr1.1:24150841-24150860 | MS.gene33305:intron | 45.0% | |
| GCAATCAAGATCTACAAGGG+AGG | + | chr1.1:24150311-24150330 | None:intergenic | 45.0% | |
| GCAATTTGTGCCTCTTCTTC+AGG | + | chr1.1:24151106-24151125 | None:intergenic | 45.0% | |
| GGAACTAAAGGCGATGAAAC+AGG | + | chr1.1:24147934-24147953 | None:intergenic | 45.0% | |
| GTGTTGAAAATCATGGGTCG+CGG | + | chr1.1:24147059-24147078 | None:intergenic | 45.0% | |
| TAACCTCTGTAACAAGTCCC+GGG | + | chr1.1:24149915-24149934 | None:intergenic | 45.0% | |
| TACAGTATGATTCGTCACCC+GGG | - | chr1.1:24149895-24149914 | MS.gene33305:intron | 45.0% | |
| TAGGTCAGTTACAGAGGCAA+TGG | - | chr1.1:24146865-24146884 | MS.gene33305:CDS | 45.0% | |
| TCACAAGACCACTCGTGTTT+GGG | - | chr1.1:24151285-24151304 | MS.gene33305:intron | 45.0% | |
| TCATGCACAGACCAGAATGT+AGG | - | chr1.1:24151053-24151072 | MS.gene33305:intron | 45.0% | |
| TTCCAGATCTTCCTTTGCCA+TGG | + | chr1.1:24151033-24151052 | None:intergenic | 45.0% | |
| TTGACATGTCCAACGAAGCT+TGG | + | chr1.1:24150188-24150207 | None:intergenic | 45.0% | |
| TTGTCAGAAGCAACACGATG+AGG | - | chr1.1:24148818-24148837 | MS.gene33305:intron | 45.0% | |
| TTTGTAGCCGAATGATTGGC+AGG | + | chr1.1:24146704-24146723 | None:intergenic | 45.0% | |
| ! | AGCTGAAGCATTTGTGGGAA+AGG | - | chr1.1:24150982-24151001 | MS.gene33305:intron | 45.0% |
| ! | ATTTGGTTTAGTTGGACGGG+AGG | - | chr1.1:24147101-24147120 | MS.gene33305:intron | 45.0% |
| ! | CAGCTAGTCTCCTGTTTCAA+AGG | + | chr1.1:24149326-24149345 | None:intergenic | 45.0% |
| ! | CGCTCATTCACTTCTAAGAG+AGG | - | chr1.1:24147539-24147558 | MS.gene33305:intron | 45.0% |
| ! | GCAACCAAGTTGACCTTCTT+TGG | + | chr1.1:24150396-24150415 | None:intergenic | 45.0% |
| ! | GCTGAAGCATTTGTGGGAAA+GGG | - | chr1.1:24150983-24151002 | MS.gene33305:intron | 45.0% |
| ! | GGGATTTGGTTTAGTTGGAC+GGG | - | chr1.1:24147098-24147117 | MS.gene33305:intron | 45.0% |
| ! | GGGGATTTGGTTTAGTTGGA+CGG | - | chr1.1:24147097-24147116 | MS.gene33305:intron | 45.0% |
| ! | TAAGAGAGGAGTTGCTGTTC+TGG | - | chr1.1:24147553-24147572 | MS.gene33305:intron | 45.0% |
| ! | TTTGGTTTAGTTGGACGGGA+GGG | - | chr1.1:24147102-24147121 | MS.gene33305:intron | 45.0% |
| !! | AAACACGAGTGGTCTTGTGA+TGG | + | chr1.1:24151285-24151304 | None:intergenic | 45.0% |
| !! | ATTGTGAGAAGCGTTTGCTC+GGG | + | chr1.1:24150839-24150858 | None:intergenic | 45.0% |
| !! | CGGAAAGTATCGCTGAACAA+TGG | + | chr1.1:24147039-24147058 | None:intergenic | 45.0% |
| !! | CTGCAGCACTTGAGTTTTGA+CGG | + | chr1.1:24151408-24151427 | None:intergenic | 45.0% |
| !! | CTTTGAAACAGGAGACTAGC+TGG | - | chr1.1:24149324-24149343 | MS.gene33305:intron | 45.0% |
| !! | GATTGTGAGAAGCGTTTGCT+CGG | + | chr1.1:24150840-24150859 | None:intergenic | 45.0% |
| !! | TCTAAGTTCTTCTGGGGCAT+TGG | - | chr1.1:24150571-24150590 | MS.gene33305:intron | 45.0% |
| !!! | TTGCTTTTTCGGCCCTTAAC+AGG | + | chr1.1:24151352-24151371 | None:intergenic | 45.0% |
| !! | AAAACTAAAAAATATAAAAA+TGG | + | chr1.1:24146784-24146803 | None:intergenic | 5.0% |
| !! | AAACTAAAAAATATAAAAAT+GGG | + | chr1.1:24146783-24146802 | None:intergenic | 5.0% |
| !! | ATTTAATTAAAAATGAAATT+AGG | - | chr1.1:24148493-24148512 | MS.gene33305:intron | 5.0% |
| !! | CAAAATTTAATTATTTAATT+AGG | - | chr1.1:24148551-24148570 | MS.gene33305:intron | 5.0% |
| ACTGGAGCCTGCCAATCATT+CGG | - | chr1.1:24146694-24146713 | MS.gene33305:CDS | 50.0% | |
| CAGGAGTGGTCTCAATAAGC+TGG | + | chr1.1:24151189-24151208 | None:intergenic | 50.0% | |
| CGCTTCTCACAATCATGGGT+TGG | - | chr1.1:24150846-24150865 | MS.gene33305:intron | 50.0% | |
| CTTGGAGAAAAGCGGGAAGA+GGG | + | chr1.1:24150170-24150189 | None:intergenic | 50.0% | |
| GATGCAGACCGCCTAATTGT+TGG | - | chr1.1:24150868-24150887 | MS.gene33305:intron | 50.0% | |
| GCAGAGAAGGGAATTGGGAA+TGG | + | chr1.1:24150143-24150162 | None:intergenic | 50.0% | |
| GGCACAAATTGCTAGGCTGA+AGG | - | chr1.1:24151114-24151133 | MS.gene33305:intron | 50.0% | |
| GGGACACAAGTAGCTTCACT+AGG | - | chr1.1:24149747-24149766 | MS.gene33305:intron | 50.0% | |
| GTGGTCTCAATAAGCTGGTG+TGG | + | chr1.1:24151184-24151203 | None:intergenic | 50.0% | |
| TAACATGCTCGTAGCACTCC+CGG | - | chr1.1:24149184-24149203 | MS.gene33305:intron | 50.0% | |
| TCGTCGCATTCATAAGGGAC+TGG | - | chr1.1:24146676-24146695 | MS.gene33305:CDS | 50.0% | |
| TGAGCACGTGGACCATAATC+CGG | - | chr1.1:24149838-24149857 | MS.gene33305:intron | 50.0% | |
| ! | CAGGTGTGGTCTCGTTTTGA+TGG | + | chr1.1:24151333-24151352 | None:intergenic | 50.0% |
| ! | CGCTTTTCTCCAAGCTTCGT+TGG | - | chr1.1:24150176-24150195 | MS.gene33305:intron | 50.0% |
| ! | GAAGAGGGAAGTGCAGAGAA+GGG | + | chr1.1:24150155-24150174 | None:intergenic | 50.0% |
| ! | GGAAGTGCAGAGAAGGGAAT+TGG | + | chr1.1:24150149-24150168 | None:intergenic | 50.0% |
| ! | GGTCAACTTGGTTGCTGCTT+TGG | - | chr1.1:24150401-24150420 | MS.gene33305:intron | 50.0% |
| ! | TTTTCGGCCCTTAACAGGTG+TGG | + | chr1.1:24151347-24151366 | None:intergenic | 50.0% |
| ! | TTTTCGGTCCCAAACAGGAG+TGG | + | chr1.1:24151251-24151270 | None:intergenic | 50.0% |
| ! | TTTTCGTCCCCAAACAGGAG+TGG | + | chr1.1:24151203-24151222 | None:intergenic | 50.0% |
| !! | TTGGTTGCTGCTTTGGTTCG+TGG | - | chr1.1:24150408-24150427 | MS.gene33305:intron | 50.0% |
| AAGCAAGAGGGGTGAGTGCT+AGG | + | chr1.1:24150073-24150092 | None:intergenic | 55.0% | |
| AGCAAGAGGGGTGAGTGCTA+GGG | + | chr1.1:24150072-24150091 | None:intergenic | 55.0% | |
| GCATAACCAACCGGCACACA+AGG | + | chr1.1:24149219-24149238 | None:intergenic | 55.0% | |
| GCTTGGAGAAAAGCGGGAAG+AGG | + | chr1.1:24150171-24150190 | None:intergenic | 55.0% | |
| ! | GGAAGAGGGAAGTGCAGAGA+AGG | + | chr1.1:24150156-24150175 | None:intergenic | 55.0% |
| !! | TCACCCGGGACTTGTTACAG+AGG | - | chr1.1:24149909-24149928 | MS.gene33305:intron | 55.0% |
| AACCAACCGGCACACAAGGC+AGG | + | chr1.1:24149215-24149234 | None:intergenic | 60.0% | |
| ACCAACCGGCACACAAGGCA+GGG | + | chr1.1:24149214-24149233 | None:intergenic | 60.0% | |
| CACACAAGGCAGGGAATGCC+GGG | + | chr1.1:24149205-24149224 | None:intergenic | 60.0% | |
| GCACACAAGGCAGGGAATGC+CGG | + | chr1.1:24149206-24149225 | None:intergenic | 60.0% | |
| GCATTCCCTGCCTTGTGTGC+CGG | - | chr1.1:24149206-24149225 | MS.gene33305:intron | 60.0% | |
| ! | TCCCTGCCTTGTGTGCCGGT+TGG | - | chr1.1:24149210-24149229 | MS.gene33305:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 24146641 | 24151435 | 24146641 | ID=MS.gene33305 |
| chr1.1 | mRNA | 24146641 | 24151435 | 24146641 | ID=MS.gene33305.t1;Parent=MS.gene33305 |
| chr1.1 | exon | 24151315 | 24151435 | 24151315 | ID=MS.gene33305.t1.exon1;Parent=MS.gene33305.t1 |
| chr1.1 | CDS | 24151315 | 24151435 | 24151315 | ID=cds.MS.gene33305.t1;Parent=MS.gene33305.t1 |
| chr1.1 | exon | 24151135 | 24151208 | 24151135 | ID=MS.gene33305.t1.exon2;Parent=MS.gene33305.t1 |
| chr1.1 | CDS | 24151135 | 24151208 | 24151135 | ID=cds.MS.gene33305.t1;Parent=MS.gene33305.t1 |
| chr1.1 | exon | 24150026 | 24150193 | 24150026 | ID=MS.gene33305.t1.exon3;Parent=MS.gene33305.t1 |
| chr1.1 | CDS | 24150026 | 24150193 | 24150026 | ID=cds.MS.gene33305.t1;Parent=MS.gene33305.t1 |
| chr1.1 | exon | 24147576 | 24147686 | 24147576 | ID=MS.gene33305.t1.exon4;Parent=MS.gene33305.t1 |
| chr1.1 | CDS | 24147576 | 24147686 | 24147576 | ID=cds.MS.gene33305.t1;Parent=MS.gene33305.t1 |
| chr1.1 | exon | 24147187 | 24147253 | 24147187 | ID=MS.gene33305.t1.exon5;Parent=MS.gene33305.t1 |
| chr1.1 | CDS | 24147187 | 24147253 | 24147187 | ID=cds.MS.gene33305.t1;Parent=MS.gene33305.t1 |
| chr1.1 | exon | 24146641 | 24147092 | 24146641 | ID=MS.gene33305.t1.exon6;Parent=MS.gene33305.t1 |
| chr1.1 | CDS | 24146641 | 24147092 | 24146641 | ID=cds.MS.gene33305.t1;Parent=MS.gene33305.t1 |
| Gene Sequence |
| Protein sequence |
