Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88636.t1 | XP_003589828.1 | 92.4 | 330 | 21 | 1 | 1 | 330 | 1 | 326 | 2.10E-136 | 495.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88636.t1 | Q92QG5 | 46.6 | 118 | 63 | 0 | 108 | 225 | 11 | 128 | 5.3e-19 | 96.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88636.t1 | G7IDE8 | 92.4 | 330 | 21 | 1 | 1 | 330 | 1 | 326 | 1.5e-136 | 495.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026155 | MS.gene88636 | PPI |
| MS.gene91152 | MS.gene88636 | PPI |
| MS.gene33305 | MS.gene88636 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88636.t1 | MTR_1g040020 | 94.545 | 330 | 14 | 1 | 1 | 330 | 1 | 326 | 0.0 | 632 |
| MS.gene88636.t1 | MTR_7g100410 | 31.008 | 129 | 85 | 2 | 95 | 222 | 65 | 190 | 3.36e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88636.t1 | AT4G28360 | 59.023 | 266 | 92 | 7 | 1 | 260 | 1 | 255 | 2.25e-94 | 281 |
| MS.gene88636.t1 | AT1G52370 | 57.303 | 267 | 96 | 6 | 1 | 261 | 1 | 255 | 3.79e-86 | 260 |
| MS.gene88636.t1 | AT1G52370 | 57.303 | 267 | 96 | 6 | 1 | 261 | 1 | 255 | 3.79e-86 | 260 |
| MS.gene88636.t1 | AT1G52370 | 57.303 | 267 | 96 | 6 | 1 | 261 | 1 | 255 | 3.79e-86 | 260 |
| MS.gene88636.t1 | AT1G52370 | 57.303 | 267 | 96 | 6 | 1 | 261 | 1 | 255 | 3.79e-86 | 260 |
| MS.gene88636.t1 | ATCG00810 | 31.818 | 110 | 75 | 0 | 111 | 220 | 12 | 121 | 1.18e-13 | 68.2 |
Find 64 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACCAAGTTGACCTTCTT+TGG | 0.202936 | 1.4:+24159737 | None:intergenic |
| GGTCAACTTGGTTGCTGCTT+TGG | 0.281050 | 1.4:-24159729 | MS.gene88636:CDS |
| TATTGAGACCACTCCTGTTT+GGG | 0.305553 | 1.4:-24158948 | MS.gene88636:CDS |
| AAACGAGACCACACCTGTTA+AGG | 0.357620 | 1.4:-24158804 | MS.gene88636:CDS |
| ATCACAAGACCACTCGTGTT+TGG | 0.368062 | 1.4:-24158856 | MS.gene88636:CDS |
| TTATTGAGACCACTCCTGTT+TGG | 0.371095 | 1.4:-24158949 | MS.gene88636:CDS |
| TATTCTTCGTCGCATTCATA+AGG | 0.387617 | 1.4:-24164458 | MS.gene88636:CDS |
| TCACAAGACCACTCGTGTTT+GGG | 0.406538 | 1.4:-24158855 | MS.gene88636:CDS |
| AGACGAGACCACTCCTGTTC+GGG | 0.414243 | 1.4:-24158900 | MS.gene88636:CDS |
| AGATCTTCCTTTGCCATGGA+TGG | 0.415454 | 1.4:+24159114 | None:intergenic |
| AACGAGACCACACCTGTTAA+GGG | 0.417185 | 1.4:-24158803 | MS.gene88636:CDS |
| TTGGTTGCTGCTTTGGTTCG+TGG | 0.425968 | 1.4:-24159722 | MS.gene88636:CDS |
| ATCCATGGCAAAGGAAGATC+TGG | 0.427839 | 1.4:-24159112 | MS.gene88636:CDS |
| TTATGAATGCGACGAAGAAT+AGG | 0.431850 | 1.4:+24164460 | None:intergenic |
| GATTGTGAGAAGCGTTTGCT+CGG | 0.435749 | 1.4:+24159303 | None:intergenic |
| TTAGTTCCAGTTTCATCATT+CGG | 0.436163 | 1.4:-24162363 | MS.gene88636:CDS |
| GAACTACCGAATGATGAAAC+TGG | 0.439490 | 1.4:+24162357 | None:intergenic |
| GGAACTAAAGGCGACGAAAC+AGG | 0.440525 | 1.4:+24162378 | None:intergenic |
| TAGACGAGACCACTCCTGTT+CGG | 0.444509 | 1.4:-24158901 | MS.gene88636:CDS |
| TCTTACAGCTGAAGCATTTG+TGG | 0.454900 | 1.4:-24159164 | MS.gene88636:intron |
| AAGGTTTGTAGCCGAATGAT+TGG | 0.455474 | 1.4:+24164423 | None:intergenic |
| ATTCTTCGTCGCATTCATAA+GGG | 0.459859 | 1.4:-24164457 | MS.gene88636:CDS |
| TATGAATGCGACGAAGAATA+GGG | 0.460626 | 1.4:+24164461 | None:intergenic |
| CTTACAGCTGAAGCATTTGT+GGG | 0.464301 | 1.4:-24159163 | MS.gene88636:intron |
| TATTGAAAACGGTGATCAAA+TGG | 0.476605 | 1.4:+24164213 | None:intergenic |
| ACAACAGTTAGCCTACATTC+TGG | 0.484826 | 1.4:+24159076 | None:intergenic |
| AGCTGAAGCATTTGTGGGAA+AGG | 0.485918 | 1.4:-24159158 | MS.gene88636:CDS |
| TTCCAGATCTTCCTTTGCCA+TGG | 0.488317 | 1.4:+24159110 | None:intergenic |
| TTACAGAGGCAATGGTCAAA+AGG | 0.489573 | 1.4:-24164255 | MS.gene88636:CDS |
| GCAAACGCTTCTCACAATCA+TGG | 0.490598 | 1.4:-24159299 | MS.gene88636:CDS |
| AAGAAGAGAGTTTCCATCCA+TGG | 0.493272 | 1.4:-24159127 | MS.gene88636:CDS |
| GTTGCAAGTGTTAGTAAAGC+GGG | 0.502385 | 1.4:-24159672 | MS.gene88636:CDS |
| AATGCTGATCGCCTAATTGT+TGG | 0.504719 | 1.4:-24159272 | MS.gene88636:intron |
| AATATTAAAGAAAATAAAGC+AGG | 0.507004 | 1.4:-24162280 | MS.gene88636:intron |
| TCAAATGGCCTTGAGATACT+TGG | 0.512474 | 1.4:+24164228 | None:intergenic |
| CAATCATGGTGCAGTGGCAG+AGG | 0.514969 | 1.4:-24164492 | None:intergenic |
| GCTGAAGCATTTGTGGGAAA+GGG | 0.521445 | 1.4:-24159157 | MS.gene88636:CDS |
| AAGTTACCTGATATTGAAAA+CGG | 0.524333 | 1.4:+24164202 | None:intergenic |
| AATGATGAAACTGGAACTAA+AGG | 0.526148 | 1.4:+24162366 | None:intergenic |
| TCGTCGCATTCATAAGGGAC+TGG | 0.528816 | 1.4:-24164452 | MS.gene88636:CDS |
| AGAGATTACCCCTGAAGAAG+AGG | 0.533567 | 1.4:-24159047 | MS.gene88636:CDS |
| ACTGGAGCCTGCCAATCATT+CGG | 0.535140 | 1.4:-24164434 | MS.gene88636:CDS |
| TTTGTAGCCGAATGATTGGC+AGG | 0.536529 | 1.4:+24164427 | None:intergenic |
| CAGGAGTGGTCTCAATAAGC+TGG | 0.554575 | 1.4:+24158954 | None:intergenic |
| TGTATTTCAGAGTCCAAAGA+AGG | 0.555548 | 1.4:-24159750 | MS.gene88636:intron |
| TAAGAAGCTAACTAAGAAGG+AGG | 0.559646 | 1.4:-24158993 | MS.gene88636:CDS |
| CAAACGCTTCTCACAATCAT+GGG | 0.566009 | 1.4:-24159298 | MS.gene88636:CDS |
| TAGGTCAGTTACAGAGGCAA+TGG | 0.576561 | 1.4:-24164263 | MS.gene88636:CDS |
| TCATCATTCGGTAGTTCACA+AGG | 0.579982 | 1.4:-24162351 | MS.gene88636:CDS |
| GAGTCCAAAGAAGGTCAACT+TGG | 0.587341 | 1.4:-24159741 | MS.gene88636:CDS |
| AAGAAGCTAACTAAGAAGGA+GGG | 0.588653 | 1.4:-24158992 | MS.gene88636:CDS |
| ATTGTGAGAAGCGTTTGCTC+GGG | 0.592593 | 1.4:+24159304 | None:intergenic |
| ATTGAGACCACTCCTGTTTG+GGG | 0.595488 | 1.4:-24158947 | MS.gene88636:CDS |
| TCATGCACAGACCAGAATGT+AGG | 0.597465 | 1.4:-24159087 | MS.gene88636:CDS |
| AACGAGAGTGATAAAGTGCA+AGG | 0.597474 | 1.4:+24164404 | None:intergenic |
| TCTCGTTCTTCTCTTTCACA+AGG | 0.601562 | 1.4:-24164388 | MS.gene88636:intron |
| AGAGTTTCCATCCATGGCAA+AGG | 0.604435 | 1.4:-24159121 | MS.gene88636:CDS |
| GTGGTCTCAATAAGCTGGTG+TGG | 0.608149 | 1.4:+24158959 | None:intergenic |
| AAATACGAAAGCTATTGCTA+AGG | 0.609994 | 1.4:-24162319 | MS.gene88636:CDS |
| AAGGTTTGCCAAGTATCTCA+AGG | 0.614639 | 1.4:-24164236 | MS.gene88636:CDS |
| AGAAAACAATCATGGTGCAG+TGG | 0.621743 | 1.4:-24164498 | None:intergenic |
| GTATTGTAGGTCAGTTACAG+AGG | 0.626522 | 1.4:-24164269 | MS.gene88636:intron |
| AAACACGAGTGGTCTTGTGA+TGG | 0.636084 | 1.4:+24158858 | None:intergenic |
| AGTTGCAAGTGTTAGTAAAG+CGG | 0.658625 | 1.4:-24159673 | MS.gene88636:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATATATTATATTTAA+TGG | + | chr1.4:24162940-24162959 | None:intergenic | 0.0% |
| !! | ATTTAATTAAAAATTAAATT+AGG | - | chr1.4:24161462-24161481 | MS.gene88636:intron | 0.0% |
| !! | ACTAAATATAAATTAATTGA+AGG | - | chr1.4:24161992-24162011 | MS.gene88636:intron | 10.0% |
| !! | CTAAATATAAATTAATTGAA+GGG | - | chr1.4:24161993-24162012 | MS.gene88636:intron | 10.0% |
| !! | CTAATACAATAAAATATATA+TGG | + | chr1.4:24163775-24163794 | None:intergenic | 10.0% |
| !!! | ATTTTAATTTATCACTAAAA+TGG | - | chr1.4:24161135-24161154 | MS.gene88636:intron | 10.0% |
| !!! | TACTTTTATCATATTTAATT+GGG | + | chr1.4:24162067-24162086 | None:intergenic | 10.0% |
| !!! | TTTTAATTTATCACTAAAAT+GGG | - | chr1.4:24161136-24161155 | MS.gene88636:intron | 10.0% |
| !! | AAAAAATATTACCAACAATT+AGG | + | chr1.4:24163956-24163975 | None:intergenic | 15.0% |
| !! | AAAAATAGGTTAAGATTATT+TGG | - | chr1.4:24160290-24160309 | MS.gene88636:intron | 15.0% |
| !! | AAATAAAAGAATTTACATCT+TGG | - | chr1.4:24161562-24161581 | MS.gene88636:intron | 15.0% |
| !! | AATAAAAGAATTTACATCTT+GGG | - | chr1.4:24161563-24161582 | MS.gene88636:intron | 15.0% |
| !! | AATATTAAAGAAAATAAAGC+AGG | - | chr1.4:24160934-24160953 | MS.gene88636:intron | 15.0% |
| !! | ATACAATAAAATATATATGG+CGG | + | chr1.4:24163772-24163791 | None:intergenic | 15.0% |
| !! | GTTAGTAATTTAAATAAATG+AGG | + | chr1.4:24162243-24162262 | None:intergenic | 15.0% |
| !!! | ATAATAGCATTGAATTAAAT+AGG | - | chr1.4:24162026-24162045 | MS.gene88636:intron | 15.0% |
| !!! | CTACTTTTATCATATTTAAT+TGG | + | chr1.4:24162068-24162087 | None:intergenic | 15.0% |
| !!! | TAATAGCATTGAATTAAATA+GGG | - | chr1.4:24162027-24162046 | MS.gene88636:intron | 15.0% |
| !!! | TGGTTTTCATATAATAAATA+GGG | - | chr1.4:24161173-24161192 | MS.gene88636:intron | 15.0% |
| !!! | TTGGTTTTCATATAATAAAT+AGG | - | chr1.4:24161172-24161191 | MS.gene88636:intron | 15.0% |
| !! | AAATTAATTGAAGGGATATT+AGG | - | chr1.4:24162001-24162020 | MS.gene88636:intron | 20.0% |
| !! | AAGTTAAAGATTACATAAAG+TGG | + | chr1.4:24161250-24161269 | None:intergenic | 20.0% |
| !! | AATTAATTGAAGGGATATTA+GGG | - | chr1.4:24162002-24162021 | MS.gene88636:intron | 20.0% |
| !! | ATATAATAACAATGTAGTGT+AGG | - | chr1.4:24159171-24159190 | MS.gene88636:intron | 20.0% |
| !! | ATCTTCAATTGAAATCAAAA+AGG | + | chr1.4:24163811-24163830 | None:intergenic | 20.0% |
| !! | ATTGTATTAGATTTCATTTG+AGG | - | chr1.4:24163785-24163804 | MS.gene88636:intron | 20.0% |
| !! | CTTAACAAATTATTCACTAA+GGG | - | chr1.4:24159407-24159426 | MS.gene88636:intron | 20.0% |
| !! | GAGGTTAAATACATAATTTA+TGG | - | chr1.4:24163002-24163021 | MS.gene88636:intron | 20.0% |
| !! | TAATTTAAATAAATGAGGCT+AGG | + | chr1.4:24162238-24162257 | None:intergenic | 20.0% |
| !! | TATAAACAAGTTATGTTTGT+TGG | + | chr1.4:24162115-24162134 | None:intergenic | 20.0% |
| !! | TATATTATATTTAATGGCAC+CGG | + | chr1.4:24162934-24162953 | None:intergenic | 20.0% |
| !! | TATGCTCATGATTTAATATA+GGG | + | chr1.4:24161757-24161776 | None:intergenic | 20.0% |
| !! | TCATCATTTAATGATTTAGA+TGG | - | chr1.4:24161213-24161232 | MS.gene88636:intron | 20.0% |
| !! | TCTTAACAAATTATTCACTA+AGG | - | chr1.4:24159406-24159425 | MS.gene88636:intron | 20.0% |
| !! | TGTACAAATGTTTGAAAATA+AGG | - | chr1.4:24159476-24159495 | MS.gene88636:intron | 20.0% |
| !! | TTAAGAAAGAATACTCTTAA+TGG | + | chr1.4:24160085-24160104 | None:intergenic | 20.0% |
| !! | TTTCTTAATCTTTATAAGTG+TGG | - | chr1.4:24160097-24160116 | MS.gene88636:intron | 20.0% |
| !! | TTTGTGATTAAAAGTGAAAA+TGG | - | chr1.4:24159505-24159524 | MS.gene88636:intron | 20.0% |
| !!! | AAAGTCTATTTGATGATTAT+AGG | + | chr1.4:24162470-24162489 | None:intergenic | 20.0% |
| !!! | ATTGTTTGCTAAATTGTTTT+TGG | - | chr1.4:24160396-24160415 | MS.gene88636:intron | 20.0% |
| !!! | ATTTGTGTTATTCTATTTCA+GGG | - | chr1.4:24160767-24160786 | MS.gene88636:intron | 20.0% |
| !!! | GCTTAAAATCCATATTTTTA+TGG | - | chr1.4:24162642-24162661 | MS.gene88636:intron | 20.0% |
| !!! | TAAAGTTTTATTCAAATTGC+AGG | - | chr1.4:24163875-24163894 | MS.gene88636:intron | 20.0% |
| !!! | TATTTGTGTTATTCTATTTC+AGG | - | chr1.4:24160766-24160785 | MS.gene88636:intron | 20.0% |
| !!! | TTATTTTCAAACATTTGTAC+AGG | + | chr1.4:24159477-24159496 | None:intergenic | 20.0% |
| !!! | TTGTTTGCTAAATTGTTTTT+GGG | - | chr1.4:24160397-24160416 | MS.gene88636:intron | 20.0% |
| !!! | TTTACATTCAATTTTACACT+GGG | - | chr1.4:24161032-24161051 | MS.gene88636:intron | 20.0% |
| ! | AAAAAACAAATCTATCCGTA+GGG | - | chr1.4:24164437-24164456 | MS.gene88636:CDS | 25.0% |
| ! | AAGACCGGTTAAAATTAATT+GGG | + | chr1.4:24159378-24159397 | None:intergenic | 25.0% |
| ! | AAGTTACCTGATATTGAAAA+CGG | + | chr1.4:24159015-24159034 | None:intergenic | 25.0% |
| ! | AATCAGAAACAAAAAGGAAA+AGG | + | chr1.4:24163707-24163726 | None:intergenic | 25.0% |
| ! | AATTTGTGGTTTATGTTTCA+AGG | - | chr1.4:24163414-24163433 | MS.gene88636:intron | 25.0% |
| ! | ACATGAAATCAGAAACAAAA+AGG | + | chr1.4:24163713-24163732 | None:intergenic | 25.0% |
| ! | ACATTATTCTCTTTATCTAC+AGG | - | chr1.4:24161617-24161636 | MS.gene88636:intron | 25.0% |
| ! | AGGTTTGAACAAGAAAAAAT+AGG | - | chr1.4:24160276-24160295 | MS.gene88636:intron | 25.0% |
| ! | ATAAAGAGAATAATGTGTTC+TGG | + | chr1.4:24161613-24161632 | None:intergenic | 25.0% |
| ! | ATAGGTTAAGATTATTTGGT+TGG | - | chr1.4:24160294-24160313 | MS.gene88636:intron | 25.0% |
| ! | ATATTATATTTAATGGCACC+GGG | + | chr1.4:24162933-24162952 | None:intergenic | 25.0% |
| ! | ATCAGAAACAAAAAGGAAAA+GGG | + | chr1.4:24163706-24163725 | None:intergenic | 25.0% |
| ! | ATGAGAGTTATATAAAGGAT+AGG | + | chr1.4:24159816-24159835 | None:intergenic | 25.0% |
| ! | ATTTACATCTTGGGTAAAAT+TGG | - | chr1.4:24161572-24161591 | MS.gene88636:intron | 25.0% |
| ! | ATTTGTGGTTTATGTTTCAA+GGG | - | chr1.4:24163415-24163434 | MS.gene88636:intron | 25.0% |
| ! | CAACAACTAATATTCATTCA+GGG | - | chr1.4:24161662-24161681 | MS.gene88636:intron | 25.0% |
| ! | CAATTCACTCAATAAATTAG+GGG | - | chr1.4:24161723-24161742 | MS.gene88636:intron | 25.0% |
| ! | CTACAATACCAAAAATAAAG+CGG | + | chr1.4:24158934-24158953 | None:intergenic | 25.0% |
| ! | CTATGCTCATGATTTAATAT+AGG | + | chr1.4:24161758-24161777 | None:intergenic | 25.0% |
| ! | GAACATAAATTGAGACATTT+AGG | + | chr1.4:24162581-24162600 | None:intergenic | 25.0% |
| ! | GAAGAATGAGAGTTATATAA+AGG | + | chr1.4:24159821-24159840 | None:intergenic | 25.0% |
| ! | GCAATTCACTCAATAAATTA+GGG | - | chr1.4:24161722-24161741 | MS.gene88636:intron | 25.0% |
| ! | TAAGACCGGTTAAAATTAAT+TGG | + | chr1.4:24159379-24159398 | None:intergenic | 25.0% |
| ! | TATAGTAGAAAGAGTTGAAA+GGG | + | chr1.4:24162376-24162395 | None:intergenic | 25.0% |
| ! | TATTCAAACCGACATAAATA+AGG | + | chr1.4:24159959-24159978 | None:intergenic | 25.0% |
| ! | TGAGAGTTATATAAAGGATA+GGG | + | chr1.4:24159815-24159834 | None:intergenic | 25.0% |
| ! | TGCAATTCACTCAATAAATT+AGG | - | chr1.4:24161721-24161740 | MS.gene88636:intron | 25.0% |
| ! | TTAAGCAGTTGAATCAAAAT+TGG | + | chr1.4:24162628-24162647 | None:intergenic | 25.0% |
| ! | TTATTCAGATAAAAGCCTTA+TGG | + | chr1.4:24159768-24159787 | None:intergenic | 25.0% |
| ! | TTTGATATACACGACAATAT+AGG | + | chr1.4:24159301-24159320 | None:intergenic | 25.0% |
| !! | AACGTTTTCTCAAAGTAAAT+AGG | - | chr1.4:24159530-24159549 | MS.gene88636:intron | 25.0% |
| !! | AACTTGTTTATATTTGAGAC+TGG | - | chr1.4:24162123-24162142 | MS.gene88636:intron | 25.0% |
| !! | CTTTACATTCAATTTTACAC+TGG | - | chr1.4:24161031-24161050 | MS.gene88636:intron | 25.0% |
| !! | TAACCAGTATTGAAAATCAT+GGG | + | chr1.4:24159235-24159254 | None:intergenic | 25.0% |
| !! | TTTTTGTGTTATCGTTGTTT+AGG | - | chr1.4:24162746-24162765 | MS.gene88636:intron | 25.0% |
| !!! | AATTGTTTTTGGGAACATTA+AGG | - | chr1.4:24160407-24160426 | MS.gene88636:intron | 25.0% |
| !!! | AGATGAATTTTTTAGCAACT+GGG | + | chr1.4:24160807-24160826 | None:intergenic | 25.0% |
| !!! | GACTAACTACTTTTCTTAAT+AGG | + | chr1.4:24161874-24161893 | None:intergenic | 25.0% |
| !!! | GATTATTTTGGTTTTCTTGT+AGG | - | chr1.4:24160990-24161009 | MS.gene88636:intron | 25.0% |
| !!! | GTAACCCAATTAATTTTAAC+CGG | - | chr1.4:24159371-24159390 | MS.gene88636:intron | 25.0% |
| !!! | GTTAAGAAATTTGTTAAGAC+CGG | + | chr1.4:24159393-24159412 | None:intergenic | 25.0% |
| !!! | GTTCAGGATAGATTATTTTT+TGG | - | chr1.4:24162602-24162621 | MS.gene88636:intron | 25.0% |
| !!! | TACGGATAGATTTGTTTTTT+CGG | + | chr1.4:24164437-24164456 | None:intergenic | 25.0% |
| !!! | TCCTATTTAACACGTTTTTT+GGG | - | chr1.4:24159881-24159900 | MS.gene88636:intron | 25.0% |
| !!! | TGAGTTTTCCTTATTTATGT+CGG | - | chr1.4:24159948-24159967 | MS.gene88636:intron | 25.0% |
| !!! | TTTGTTTCTGATTTCATGTT+GGG | - | chr1.4:24163714-24163733 | MS.gene88636:intron | 25.0% |
| !!! | TTTTAAGAAGCTAACTAAGA+AGG | - | chr1.4:24164218-24164237 | MS.gene88636:CDS | 25.0% |
| !!! | TTTTGTTTCTGATTTCATGT+TGG | - | chr1.4:24163713-24163732 | MS.gene88636:intron | 25.0% |
| AAAAACAAATCTATCCGTAG+GGG | - | chr1.4:24164438-24164457 | MS.gene88636:CDS | 30.0% | |
| AAAACGTGTTAAATAGGAGT+TGG | + | chr1.4:24159879-24159898 | None:intergenic | 30.0% | |
| AAATACGAAAGCTATTGCTA+AGG | - | chr1.4:24160895-24160914 | MS.gene88636:intron | 30.0% | |
| AACGCTCAACCATAAAAATA+TGG | + | chr1.4:24162654-24162673 | None:intergenic | 30.0% | |
| AACTAACCAAATCACAATCT+TGG | - | chr1.4:24160650-24160669 | MS.gene88636:intron | 30.0% | |
| AATAAGGAAAACTCAATCAC+TGG | + | chr1.4:24159943-24159962 | None:intergenic | 30.0% | |
| AATAGAGTATAGCTGAACAA+TGG | + | chr1.4:24159125-24159144 | None:intergenic | 30.0% | |
| AATGATGAAACTGGAACTAA+AGG | + | chr1.4:24160851-24160870 | None:intergenic | 30.0% | |
| AATGGGCATTAATGAAAACT+TGG | - | chr1.4:24161153-24161172 | MS.gene88636:intron | 30.0% | |
| AATGTTCACTAAATTGCTTG+AGG | + | chr1.4:24160059-24160078 | None:intergenic | 30.0% | |
| AATTGCTTTCTAAGTTCTTC+TGG | - | chr1.4:24163644-24163663 | MS.gene88636:intron | 30.0% | |
| ACTAACCAAATCACAATCTT+GGG | - | chr1.4:24160651-24160670 | MS.gene88636:intron | 30.0% | |
| AGATATAATAACACCAACAC+AGG | + | chr1.4:24160687-24160706 | None:intergenic | 30.0% | |
| AGTGCTCAATATGATAGATT+AGG | - | chr1.4:24161690-24161709 | MS.gene88636:intron | 30.0% | |
| AGTTATATATAGTACTCCCT+CGG | - | chr1.4:24161813-24161832 | MS.gene88636:intron | 30.0% | |
| ATAAGGAAAACTCAATCACT+GGG | + | chr1.4:24159942-24159961 | None:intergenic | 30.0% | |
| ATTGCTTTCTAAGTTCTTCT+GGG | - | chr1.4:24163645-24163664 | MS.gene88636:intron | 30.0% | |
| GAAAAAACAAATCTATCCGT+AGG | - | chr1.4:24164436-24164455 | MS.gene88636:CDS | 30.0% | |
| GATCTTCTATTACTCTTCAT+AGG | - | chr1.4:24163828-24163847 | MS.gene88636:intron | 30.0% | |
| GCAACAACTAATATTCATTC+AGG | - | chr1.4:24161661-24161680 | MS.gene88636:intron | 30.0% | |
| GCTATACTCTATTTAGTAGA+AGG | - | chr1.4:24159132-24159151 | MS.gene88636:CDS | 30.0% | |
| GTATAGTAGAAAGAGTTGAA+AGG | + | chr1.4:24162377-24162396 | None:intergenic | 30.0% | |
| GTGATAACAATAACTAGTGT+TGG | + | chr1.4:24163591-24163610 | None:intergenic | 30.0% | |
| GTGCTCAATATGATAGATTA+GGG | - | chr1.4:24161691-24161710 | MS.gene88636:intron | 30.0% | |
| GTTGCTAAAAAATTCATCTG+AGG | - | chr1.4:24160808-24160827 | MS.gene88636:intron | 30.0% | |
| TATCTACAGGTATAAGCTAA+AGG | - | chr1.4:24161630-24161649 | MS.gene88636:intron | 30.0% | |
| TATTGAAAACGGTGATCAAA+TGG | + | chr1.4:24159004-24159023 | None:intergenic | 30.0% | |
| TCAAGTTTGTAAGGGTTTAT+GGG | - | chr1.4:24158905-24158924 | MS.gene88636:CDS | 30.0% | |
| TCAATATGATAGATTAGGGT+GGG | - | chr1.4:24161695-24161714 | MS.gene88636:intron | 30.0% | |
| TCATCAGTAAAGAGAAAACA+AGG | + | chr1.4:24164015-24164034 | None:intergenic | 30.0% | |
| TCTCAATTTATGTTCTGTTC+AGG | - | chr1.4:24162586-24162605 | MS.gene88636:intron | 30.0% | |
| TTAGTTCCAGTTTCATCATT+CGG | - | chr1.4:24160851-24160870 | MS.gene88636:intron | 30.0% | |
| TTTCTTTAGTAAGCACTTTG+TGG | - | chr1.4:24160206-24160225 | MS.gene88636:intron | 30.0% | |
| ! | AACAATTTTCGCAGATGATT+TGG | - | chr1.4:24163329-24163348 | MS.gene88636:intron | 30.0% |
| ! | ACGAGTTATTCAAGTTTGTA+AGG | - | chr1.4:24158896-24158915 | MS.gene88636:CDS | 30.0% |
| ! | AGATAAAAGCCTTATGGTTT+AGG | + | chr1.4:24159762-24159781 | None:intergenic | 30.0% |
| ! | AGGAATTCTTGGATTTTTCA+AGG | - | chr1.4:24160367-24160386 | MS.gene88636:intron | 30.0% |
| ! | AGTTTTCTCCTATAGATAAG+TGG | - | chr1.4:24159600-24159619 | MS.gene88636:intron | 30.0% |
| ! | ATTTAAAATTGATCTTGCCG+AGG | - | chr1.4:24160029-24160048 | MS.gene88636:intron | 30.0% |
| ! | ATTTTCCAAATTATCCCTCA+TGG | - | chr1.4:24161932-24161951 | MS.gene88636:intron | 30.0% |
| ! | CATTCCATTATCAGTTTTTC+AGG | + | chr1.4:24161099-24161118 | None:intergenic | 30.0% |
| ! | CCTGTTTACTTTGAGAAATT+GGG | - | chr1.4:24159430-24159449 | MS.gene88636:intron | 30.0% |
| ! | CGAGTTATTCAAGTTTGTAA+GGG | - | chr1.4:24158897-24158916 | MS.gene88636:CDS | 30.0% |
| ! | CTAACCAGTATTGAAAATCA+TGG | + | chr1.4:24159236-24159255 | None:intergenic | 30.0% |
| ! | GTTGGTTATATTTGATGACA+TGG | + | chr1.4:24159861-24159880 | None:intergenic | 30.0% |
| ! | TAGTTAGTCTCCTATTTCAA+AGG | + | chr1.4:24162401-24162420 | None:intergenic | 30.0% |
| ! | TCCAGTATACTTGTTAAAGT+GGG | - | chr1.4:24162801-24162820 | MS.gene88636:intron | 30.0% |
| ! | TGTTTATATTTGAGACTGGA+GGG | - | chr1.4:24162127-24162146 | MS.gene88636:intron | 30.0% |
| ! | TGTTTCTTTTCTGTGAATTC+AGG | + | chr1.4:24159644-24159663 | None:intergenic | 30.0% |
| ! | TTCAAGTTTGTAAGGGTTTA+TGG | - | chr1.4:24158904-24158923 | MS.gene88636:CDS | 30.0% |
| ! | TTGTAAGTATTAGCTTCCTT+AGG | + | chr1.4:24160123-24160142 | None:intergenic | 30.0% |
| ! | TTGTTTATATTTGAGACTGG+AGG | - | chr1.4:24162126-24162145 | MS.gene88636:intron | 30.0% |
| ! | TTTAAAATTGATCTTGCCGA+GGG | - | chr1.4:24160030-24160049 | MS.gene88636:intron | 30.0% |
| ! | TTTTCCAAATTATCCCTCAT+GGG | - | chr1.4:24161933-24161952 | MS.gene88636:intron | 30.0% |
| !! | AAGATTGTGATTTGGTTAGT+TGG | + | chr1.4:24160651-24160670 | None:intergenic | 30.0% |
| !! | CTACTATACTCCTTTGAAAT+AGG | - | chr1.4:24162388-24162407 | MS.gene88636:CDS | 30.0% |
| !! | TTTTCTCTTTACTGATGATG+CGG | - | chr1.4:24164017-24164036 | MS.gene88636:intron | 30.0% |
| !!! | ATGCTCTTGATGGATTATTT+TGG | - | chr1.4:24160978-24160997 | MS.gene88636:intron | 30.0% |
| !!! | CAGATGAATTTTTTAGCAAC+TGG | + | chr1.4:24160808-24160827 | None:intergenic | 30.0% |
| !!! | CAGTAACACTTTTTTTCTCA+TGG | + | chr1.4:24161968-24161987 | None:intergenic | 30.0% |
| !!! | CGCTTTATTTTTGGTATTGT+AGG | - | chr1.4:24158932-24158951 | MS.gene88636:CDS | 30.0% |
| !!! | CTCCTATTTAACACGTTTTT+TGG | - | chr1.4:24159880-24159899 | MS.gene88636:intron | 30.0% |
| !!! | GATGGCTAGATTTGTTTTTT+CGG | + | chr1.4:24164341-24164360 | None:intergenic | 30.0% |
| !!! | TGTTTTTTCGCTTTTCTCAA+AGG | - | chr1.4:24161307-24161326 | MS.gene88636:intron | 30.0% |
| AAACAAAAAGGAAAAGGGCT+AGG | + | chr1.4:24163701-24163720 | None:intergenic | 35.0% | |
| AACAAAAGCTGTTAGGTACT+GGG | + | chr1.4:24159919-24159938 | None:intergenic | 35.0% | |
| AAGAAGAGGCAAAAATTGCT+AGG | - | chr1.4:24164181-24164200 | MS.gene88636:intron | 35.0% | |
| AAGAAGCTAACTAAGAAGGA+GGG | - | chr1.4:24164222-24164241 | MS.gene88636:CDS | 35.0% | |
| AAGAATTTCACTCCTTCTAG+CGG | - | chr1.4:24160183-24160202 | MS.gene88636:intron | 35.0% | |
| AAGCACTTCCACTTATCTAT+AGG | + | chr1.4:24159611-24159630 | None:intergenic | 35.0% | |
| AATAGAGGGAATAATGTGAG+TGG | + | chr1.4:24163197-24163216 | None:intergenic | 35.0% | |
| ACTAGACATGCTGTTATTGT+AGG | - | chr1.4:24160481-24160500 | MS.gene88636:intron | 35.0% | |
| AGAGAAATATCTCTTCTCTG+AGG | + | chr1.4:24159734-24159753 | None:intergenic | 35.0% | |
| AGAGCAATCAAGATCTACAA+GGG | + | chr1.4:24163384-24163403 | None:intergenic | 35.0% | |
| AGCAACTATTTGACAACACT+GGG | + | chr1.4:24159075-24159094 | None:intergenic | 35.0% | |
| AGTTGCAAGTGTTAGTAAAG+CGG | - | chr1.4:24163541-24163560 | MS.gene88636:intron | 35.0% | |
| ATCATGAAGTCCAAGAAAAC+AGG | + | chr1.4:24160579-24160598 | None:intergenic | 35.0% | |
| ATCTTTATAAGTGTGGCCTA+AGG | - | chr1.4:24160104-24160123 | MS.gene88636:intron | 35.0% | |
| ATTCTTCGTCGCATTCATAA+GGG | - | chr1.4:24158757-24158776 | MS.gene88636:CDS | 35.0% | |
| CAAGTTTGTAAGGGTTTATG+GGG | - | chr1.4:24158906-24158925 | MS.gene88636:CDS | 35.0% | |
| CAGAATTTCAATGATCTGCT+TGG | - | chr1.4:24162188-24162207 | MS.gene88636:intron | 35.0% | |
| CAGTCCTGAAAAACTGATAA+TGG | - | chr1.4:24161092-24161111 | MS.gene88636:intron | 35.0% | |
| CCCAATTTCTCAAAGTAAAC+AGG | + | chr1.4:24159433-24159452 | None:intergenic | 35.0% | |
| CTCAATATGATAGATTAGGG+TGG | - | chr1.4:24161694-24161713 | MS.gene88636:intron | 35.0% | |
| GAATGGGATACAATCATGAA+AGG | + | chr1.4:24162521-24162540 | None:intergenic | 35.0% | |
| GACCAATACAACAATGATGA+TGG | + | chr1.4:24159053-24159072 | None:intergenic | 35.0% | |
| GCCCAAAAAACGTGTTAAAT+AGG | + | chr1.4:24159885-24159904 | None:intergenic | 35.0% | |
| GGCTTCAAAAACTGTATATC+AGG | - | chr1.4:24163563-24163582 | MS.gene88636:intron | 35.0% | |
| GTTGTGATAAAAGTCAACAG+AGG | + | chr1.4:24161337-24161356 | None:intergenic | 35.0% | |
| TAAGAAGCTAACTAAGAAGG+AGG | - | chr1.4:24164221-24164240 | MS.gene88636:CDS | 35.0% | |
| TAATGATCAATCCCTCTTTC+TGG | - | chr1.4:24159785-24159804 | MS.gene88636:intron | 35.0% | |
| TAGCAACTATTTGACAACAC+TGG | + | chr1.4:24159076-24159095 | None:intergenic | 35.0% | |
| TATGAATGCGACGAAGAATA+GGG | + | chr1.4:24158756-24158775 | None:intergenic | 35.0% | |
| TATTCTTCGTCGCATTCATA+AGG | - | chr1.4:24158756-24158775 | MS.gene88636:CDS | 35.0% | |
| TCCCACTTTAACAAGTATAC+TGG | + | chr1.4:24162805-24162824 | None:intergenic | 35.0% | |
| TGGTGGAATTGTACAAGTTA+CGG | + | chr1.4:24162350-24162369 | None:intergenic | 35.0% | |
| TGTATTTCAGAGTCCAAAGA+AGG | - | chr1.4:24163464-24163483 | MS.gene88636:intron | 35.0% | |
| TTACTAAAGAAACCGCTAGA+AGG | + | chr1.4:24160198-24160217 | None:intergenic | 35.0% | |
| TTATCTCTTCATGCTCTTGA+TGG | - | chr1.4:24160968-24160987 | MS.gene88636:intron | 35.0% | |
| TTATGAATGCGACGAAGAAT+AGG | + | chr1.4:24158757-24158776 | None:intergenic | 35.0% | |
| TTCATGATTGTATCCCATTC+AGG | - | chr1.4:24162521-24162540 | MS.gene88636:intron | 35.0% | |
| TTGCTTTCTAAGTTCTTCTG+GGG | - | chr1.4:24163646-24163665 | MS.gene88636:intron | 35.0% | |
| TTTCCAAATTATCCCTCATG+GGG | - | chr1.4:24161934-24161953 | MS.gene88636:intron | 35.0% | |
| TTTGGGAACATTAAGGTTGT+TGG | - | chr1.4:24160414-24160433 | MS.gene88636:intron | 35.0% | |
| ! | AATTTTTGCCTCTTCTTCAG+GGG | + | chr1.4:24164178-24164197 | None:intergenic | 35.0% |
| ! | ACTGGTTAGTTCACAAGTTT+GGG | - | chr1.4:24159247-24159266 | MS.gene88636:intron | 35.0% |
| ! | AGAAAGAGTTGAAAGGGTAT+TGG | + | chr1.4:24162370-24162389 | None:intergenic | 35.0% |
| ! | ATCAAGAGCATGAAGAGATA+AGG | + | chr1.4:24160969-24160988 | None:intergenic | 35.0% |
| ! | CAATTTTTGCCTCTTCTTCA+GGG | + | chr1.4:24164179-24164198 | None:intergenic | 35.0% |
| ! | CTCCAGTATACTTGTTAAAG+TGG | - | chr1.4:24162800-24162819 | MS.gene88636:intron | 35.0% |
| ! | CTCTGGAAACTCAAAATTTG+TGG | - | chr1.4:24163400-24163419 | MS.gene88636:intron | 35.0% |
| ! | GCCTGTTTACTTTGAGAAAT+TGG | - | chr1.4:24159429-24159448 | MS.gene88636:intron | 35.0% |
| ! | TACTGGTTAGTTCACAAGTT+TGG | - | chr1.4:24159246-24159265 | MS.gene88636:intron | 35.0% |
| ! | TGATCACCGTTTTCAATATC+AGG | - | chr1.4:24159006-24159025 | MS.gene88636:CDS | 35.0% |
| ! | TGCTTTTATATGAGATCCGA+GGG | + | chr1.4:24161832-24161851 | None:intergenic | 35.0% |
| !! | TTGCTTTTATATGAGATCCG+AGG | + | chr1.4:24161833-24161852 | None:intergenic | 35.0% |
| !!! | GACGGCTAGATTTGTTTTTT+CGG | + | chr1.4:24164464-24164483 | None:intergenic | 35.0% |
| !!! | TAAGTGGAAGTGCTTTTGAT+AGG | - | chr1.4:24159616-24159635 | MS.gene88636:intron | 35.0% |
| !!! | TTAACACGTTTTTTGGGCTT+AGG | - | chr1.4:24159887-24159906 | MS.gene88636:intron | 35.0% |
| !!! | TTATTTTTTCGTCCCCAAAC+AGG | + | chr1.4:24164282-24164301 | None:intergenic | 35.0% |
| AAATTACACTAGCGTGCAGA+CGG | - | chr1.4:24161271-24161290 | MS.gene88636:intron | 40.0% | |
| AAATTGCTTGAGGAAACCCT+CGG | + | chr1.4:24160049-24160068 | None:intergenic | 40.0% | |
| AACGAGAGTGATAAAGTGCA+AGG | + | chr1.4:24158813-24158832 | None:intergenic | 40.0% | |
| AAGAAGAGAGTTTCCATCCA+TGG | - | chr1.4:24164087-24164106 | MS.gene88636:intron | 40.0% | |
| AAGGTTTGCCAAGTATCTCA+AGG | - | chr1.4:24158978-24158997 | MS.gene88636:CDS | 40.0% | |
| AAGGTTTGTAGCCGAATGAT+TGG | + | chr1.4:24158794-24158813 | None:intergenic | 40.0% | |
| AATAAATGAGGCTAGGCAAG+AGG | + | chr1.4:24162231-24162250 | None:intergenic | 40.0% | |
| AATGCTGATCGCCTAATTGT+TGG | - | chr1.4:24163942-24163961 | MS.gene88636:intron | 40.0% | |
| ACAAGCAGTTACACCTGAAT+GGG | + | chr1.4:24162537-24162556 | None:intergenic | 40.0% | |
| ACAGTCTGTGCATAACAAAC+CGG | + | chr1.4:24162303-24162322 | None:intergenic | 40.0% | |
| AGCACTTTGTGGAGTGTATT+AGG | - | chr1.4:24160217-24160236 | MS.gene88636:intron | 40.0% | |
| ATACGCACAATGATGGTATC+AGG | + | chr1.4:24163069-24163088 | None:intergenic | 40.0% | |
| ATGGAATAAGTTCCCCATGA+GGG | + | chr1.4:24161949-24161968 | None:intergenic | 40.0% | |
| ATTCAAGTATGATGAGCACG+TGG | - | chr1.4:24162900-24162919 | MS.gene88636:intron | 40.0% | |
| ATTGTGAAGAGAAAGCGAGA+GGG | + | chr1.4:24163166-24163185 | None:intergenic | 40.0% | |
| CAAACGCTTCTCACAATCAT+GGG | - | chr1.4:24163916-24163935 | MS.gene88636:intron | 40.0% | |
| CAGAGCAATCAAGATCTACA+AGG | + | chr1.4:24163385-24163404 | None:intergenic | 40.0% | |
| CGCCATCATCATTGTTGTAT+TGG | - | chr1.4:24159048-24159067 | MS.gene88636:CDS | 40.0% | |
| CGTGCTCATCATACTTGAAT+TGG | + | chr1.4:24162900-24162919 | None:intergenic | 40.0% | |
| CTACAGTATGATTCATCACC+CGG | - | chr1.4:24162968-24162987 | MS.gene88636:intron | 40.0% | |
| CTTGTAGATCTTGATTGCTC+TGG | - | chr1.4:24163383-24163402 | MS.gene88636:intron | 40.0% | |
| GAACAAAAGCTGTTAGGTAC+TGG | + | chr1.4:24159920-24159939 | None:intergenic | 40.0% | |
| GAACTACCGAATGATGAAAC+TGG | + | chr1.4:24160860-24160879 | None:intergenic | 40.0% | |
| GAGCATCTTGAAGGCAAAAA+TGG | - | chr1.4:24162149-24162168 | MS.gene88636:intron | 40.0% | |
| GATACCATCATTGTGCGTAT+GGG | - | chr1.4:24163069-24163088 | MS.gene88636:intron | 40.0% | |
| GTATTGTAGGTCAGTTACAG+AGG | - | chr1.4:24158945-24158964 | MS.gene88636:CDS | 40.0% | |
| GTTGCAAGTGTTAGTAAAGC+GGG | - | chr1.4:24163542-24163561 | MS.gene88636:intron | 40.0% | |
| TACAAGCAGTTACACCTGAA+TGG | + | chr1.4:24162538-24162557 | None:intergenic | 40.0% | |
| TACAGTATGATTCATCACCC+GGG | - | chr1.4:24162969-24162988 | MS.gene88636:intron | 40.0% | |
| TATTGAGACCACTCCTGTTT+GGG | - | chr1.4:24164266-24164285 | MS.gene88636:intron | 40.0% | |
| TCATCATTCGGTAGTTCACA+AGG | - | chr1.4:24160863-24160882 | MS.gene88636:intron | 40.0% | |
| TCTCGTTCTTCTCTTTCACA+AGG | - | chr1.4:24158826-24158845 | MS.gene88636:CDS | 40.0% | |
| TGATACCATCATTGTGCGTA+TGG | - | chr1.4:24163068-24163087 | MS.gene88636:intron | 40.0% | |
| TGGAATTGTACAAGTTACGG+AGG | + | chr1.4:24162347-24162366 | None:intergenic | 40.0% | |
| TGTGACCCAAGATTGTGATT+TGG | + | chr1.4:24160659-24160678 | None:intergenic | 40.0% | |
| TTAACCTCTGTAACAAGTCC+CGG | + | chr1.4:24162990-24163009 | None:intergenic | 40.0% | |
| TTACAGAGGCAATGGTCAAA+AGG | - | chr1.4:24158959-24158978 | MS.gene88636:CDS | 40.0% | |
| TTATTGAGACCACTCCTGTT+TGG | - | chr1.4:24164265-24164284 | MS.gene88636:intron | 40.0% | |
| TTGCTTCTGACAAAAGTGAG+AGG | + | chr1.4:24161782-24161801 | None:intergenic | 40.0% | |
| ! | ACAACAGTTAGCCTACATTC+TGG | + | chr1.4:24164141-24164160 | None:intergenic | 40.0% |
| ! | ACTGTGTCAACCTGTTTTCT+TGG | - | chr1.4:24160566-24160585 | MS.gene88636:intron | 40.0% |
| ! | ATTTTTGTCCCAAACACGAG+TGG | + | chr1.4:24164370-24164389 | None:intergenic | 40.0% |
| ! | CGACCCATGATTTTCAATAC+TGG | - | chr1.4:24159229-24159248 | MS.gene88636:intron | 40.0% |
| ! | CTGGTTAGTTCACAAGTTTG+GGG | - | chr1.4:24159248-24159267 | MS.gene88636:intron | 40.0% |
| ! | CTTACAGCTGAAGCATTTGT+GGG | - | chr1.4:24164051-24164070 | MS.gene88636:intron | 40.0% |
| ! | GCAATTTTTGCCTCTTCTTC+AGG | + | chr1.4:24164180-24164199 | None:intergenic | 40.0% |
| ! | GGTTTTCTTGTAGGCATGAT+TGG | - | chr1.4:24160999-24161018 | MS.gene88636:intron | 40.0% |
| ! | TATTTAATGGCACCGGGTTA+TGG | + | chr1.4:24162927-24162946 | None:intergenic | 40.0% |
| ! | TCAAATGGCCTTGAGATACT+TGG | + | chr1.4:24158989-24159008 | None:intergenic | 40.0% |
| ! | TCTTACAGCTGAAGCATTTG+TGG | - | chr1.4:24164050-24164069 | MS.gene88636:intron | 40.0% |
| ! | TTGGGACTGTGTTAGTTTGA+AGG | - | chr1.4:24163732-24163751 | MS.gene88636:intron | 40.0% |
| ! | TTTGGTTTAGTTGGAAGGGA+GGG | - | chr1.4:24159272-24159291 | MS.gene88636:intron | 40.0% |
| !! | AAGAGTTGAAAGGGTATTGG+TGG | + | chr1.4:24162367-24162386 | None:intergenic | 40.0% |
| !!! | ATGGGGAACCGCTTTATTTT+TGG | - | chr1.4:24158923-24158942 | MS.gene88636:CDS | 40.0% |
| !!! | ATTTGTTTTTTCGGCCCCTA+CGG | + | chr1.4:24164455-24164474 | None:intergenic | 40.0% |
| !!! | TTGTTTTTTCGGCCCTTAAC+AGG | + | chr1.4:24164426-24164445 | None:intergenic | 40.0% |
| AAAAGGAAAAGGGCTAGGAG+TGG | + | chr1.4:24163696-24163715 | None:intergenic | 45.0% | |
| AAACGAGACCACACCTGTTA+AGG | - | chr1.4:24164410-24164429 | MS.gene88636:CDS | 45.0% | |
| AAAGGGCTAGGAGTGGAAAA+AGG | + | chr1.4:24163689-24163708 | None:intergenic | 45.0% | |
| AACGAAGCTTGGAGAAAAGC+AGG | + | chr1.4:24163260-24163279 | None:intergenic | 45.0% | |
| AACGAGACCACACCTGTTAA+GGG | - | chr1.4:24164411-24164430 | MS.gene88636:CDS | 45.0% | |
| AATTACACTAGCGTGCAGAC+GGG | - | chr1.4:24161272-24161291 | MS.gene88636:intron | 45.0% | |
| ACCTTGTAAACCCTATCGTC+AGG | + | chr1.4:24160260-24160279 | None:intergenic | 45.0% | |
| AGAGATTACCCCTGAAGAAG+AGG | - | chr1.4:24164167-24164186 | MS.gene88636:intron | 45.0% | |
| AGAGTTTCCATCCATGGCAA+AGG | - | chr1.4:24164093-24164112 | MS.gene88636:intron | 45.0% | |
| AGATCCACCACAAAACAGCA+AGG | + | chr1.4:24160331-24160350 | None:intergenic | 45.0% | |
| AGATCTTCCTTTGCCATGGA+TGG | + | chr1.4:24164103-24164122 | None:intergenic | 45.0% | |
| ATCACAAGACCACTCGTGTT+TGG | - | chr1.4:24164358-24164377 | MS.gene88636:intron | 45.0% | |
| ATCCATGGCAAAGGAAGATC+TGG | - | chr1.4:24164102-24164121 | MS.gene88636:intron | 45.0% | |
| ATTGAGACCACTCCTGTTTG+GGG | - | chr1.4:24164267-24164286 | MS.gene88636:intron | 45.0% | |
| CACTGGGAACAAAAGCTGTT+AGG | + | chr1.4:24159926-24159945 | None:intergenic | 45.0% | |
| CAGAGAAGGGAATTGGGAAT+GGG | + | chr1.4:24163225-24163244 | None:intergenic | 45.0% | |
| CATCATTGTGCGTATGGGAA+TGG | - | chr1.4:24163074-24163093 | MS.gene88636:intron | 45.0% | |
| CATGGAATAAGTTCCCCATG+AGG | + | chr1.4:24161950-24161969 | None:intergenic | 45.0% | |
| CATTCCCATACGCACAATGA+TGG | + | chr1.4:24163076-24163095 | None:intergenic | 45.0% | |
| CATTGTGAAGAGAAAGCGAG+AGG | + | chr1.4:24163167-24163186 | None:intergenic | 45.0% | |
| CTCTCGCTTTCTCTTCACAA+TGG | - | chr1.4:24163165-24163184 | MS.gene88636:intron | 45.0% | |
| CTCTCTCTGCCTAAACCATA+AGG | - | chr1.4:24159750-24159769 | MS.gene88636:intron | 45.0% | |
| CTTGGAGAAAAGCAGGAAGA+GGG | + | chr1.4:24163253-24163272 | None:intergenic | 45.0% | |
| GAAGTGCAGAGAAGGGAATT+GGG | + | chr1.4:24163231-24163250 | None:intergenic | 45.0% | |
| GAGTCCAAAGAAGGTCAACT+TGG | - | chr1.4:24163473-24163492 | MS.gene88636:intron | 45.0% | |
| GAGTCTTGGAGAGGAATTCT+TGG | - | chr1.4:24160356-24160375 | MS.gene88636:intron | 45.0% | |
| GATAGGGATAGCCAGAAAGA+GGG | + | chr1.4:24159799-24159818 | None:intergenic | 45.0% | |
| GCAAACGCTTCTCACAATCA+TGG | - | chr1.4:24163915-24163934 | MS.gene88636:intron | 45.0% | |
| GCAATCAAGATCTACAAGGG+AGG | + | chr1.4:24163381-24163400 | None:intergenic | 45.0% | |
| GGCAAAAATTGCTAGGCTGA+AGG | - | chr1.4:24164188-24164207 | MS.gene88636:intron | 45.0% | |
| GGGAATGGGAGAGAAATAGA+GGG | + | chr1.4:24163211-24163230 | None:intergenic | 45.0% | |
| GTTCCCCATGAGGGATAATT+TGG | + | chr1.4:24161940-24161959 | None:intergenic | 45.0% | |
| TAACATACTCGTAGCACTCC+CGG | - | chr1.4:24162259-24162278 | MS.gene88636:intron | 45.0% | |
| TAACCTCTGTAACAAGTCCC+GGG | + | chr1.4:24162989-24163008 | None:intergenic | 45.0% | |
| TAGGTCAGTTACAGAGGCAA+TGG | - | chr1.4:24158951-24158970 | MS.gene88636:CDS | 45.0% | |
| TCACAAGACCACTCGTGTTT+GGG | - | chr1.4:24164359-24164378 | MS.gene88636:intron | 45.0% | |
| TCATGCACAGACCAGAATGT+AGG | - | chr1.4:24164127-24164146 | MS.gene88636:intron | 45.0% | |
| TCATGGGTCGTAGAAAGTAG+CGG | + | chr1.4:24159219-24159238 | None:intergenic | 45.0% | |
| TCCTGACGATAGGGTTTACA+AGG | - | chr1.4:24160256-24160275 | MS.gene88636:intron | 45.0% | |
| TGGGAATGGGAGAGAAATAG+AGG | + | chr1.4:24163212-24163231 | None:intergenic | 45.0% | |
| TGTAAACCCTATCGTCAGGA+AGG | + | chr1.4:24160256-24160275 | None:intergenic | 45.0% | |
| TTCCAGATCTTCCTTTGCCA+TGG | + | chr1.4:24164107-24164126 | None:intergenic | 45.0% | |
| TTGTCAGAAGCAACACGATG+AGG | - | chr1.4:24161789-24161808 | MS.gene88636:intron | 45.0% | |
| TTGTGAAGAGAAAGCGAGAG+GGG | + | chr1.4:24163165-24163184 | None:intergenic | 45.0% | |
| TTTGTAGCCGAATGATTGGC+AGG | + | chr1.4:24158790-24158809 | None:intergenic | 45.0% | |
| ! | AATGTAGTGTAGGAGCGTAG+TGG | - | chr1.4:24159181-24159200 | MS.gene88636:intron | 45.0% |
| ! | AGCTGAAGCATTTGTGGGAA+AGG | - | chr1.4:24164056-24164075 | MS.gene88636:intron | 45.0% |
| ! | AGTTCACAAGTTTGGGGCTT+TGG | - | chr1.4:24159254-24159273 | MS.gene88636:intron | 45.0% |
| ! | ATTCAGAGGAGTTGCTGTTC+TGG | - | chr1.4:24160458-24160477 | MS.gene88636:intron | 45.0% |
| ! | CTTTGGTTTAGTTGGAAGGG+AGG | - | chr1.4:24159271-24159290 | MS.gene88636:intron | 45.0% |
| ! | GCAACCAAGTTGACCTTCTT+TGG | + | chr1.4:24163480-24163499 | None:intergenic | 45.0% |
| ! | GCTGAAGCATTTGTGGGAAA+GGG | - | chr1.4:24164057-24164076 | MS.gene88636:intron | 45.0% |
| ! | GGGCTTTGGTTTAGTTGGAA+GGG | - | chr1.4:24159268-24159287 | MS.gene88636:intron | 45.0% |
| ! | GTTTGGGGCTTTGGTTTAGT+TGG | - | chr1.4:24159263-24159282 | MS.gene88636:intron | 45.0% |
| ! | TGCTTTTCTCCAAGCTTCGT+TGG | - | chr1.4:24163259-24163278 | MS.gene88636:intron | 45.0% |
| !! | AAACACGAGTGGTCTTGTGA+TGG | + | chr1.4:24164359-24164378 | None:intergenic | 45.0% |
| !! | AAGCTGTTAGGTACTGGGTT+TGG | + | chr1.4:24159914-24159933 | None:intergenic | 45.0% |
| !! | AGCTGTTAGGTACTGGGTTT+GGG | + | chr1.4:24159913-24159932 | None:intergenic | 45.0% |
| !! | ATTGTGAGAAGCGTTTGCTC+GGG | + | chr1.4:24163913-24163932 | None:intergenic | 45.0% |
| !! | CTGCAGCACTTGAGTTTTGA+CGG | + | chr1.4:24164482-24164501 | None:intergenic | 45.0% |
| !! | GATTGTGAGAAGCGTTTGCT+CGG | + | chr1.4:24163914-24163933 | None:intergenic | 45.0% |
| !! | TCTAAGTTCTTCTGGGGCAT+TGG | - | chr1.4:24163652-24163671 | MS.gene88636:intron | 45.0% |
| !!! | CTTTCCTTGCTGTTTTGTGG+TGG | - | chr1.4:24160324-24160343 | MS.gene88636:intron | 45.0% |
| !!! | CTTTTGCTCTGGGGTTACAA+GGG | + | chr1.4:24159709-24159728 | None:intergenic | 45.0% |
| !!! | GAGCTTTCCTTGCTGTTTTG+TGG | - | chr1.4:24160321-24160340 | MS.gene88636:intron | 45.0% |
| !!! | TGTTTTGTGGTGGATCTGGT+TGG | - | chr1.4:24160334-24160353 | MS.gene88636:intron | 45.0% |
| !!! | TTGCTGTTTTGTGGTGGATC+TGG | - | chr1.4:24160330-24160349 | MS.gene88636:intron | 45.0% |
| !!! | TTGTTTTTTCGGTCCCGAAC+AGG | + | chr1.4:24164330-24164349 | None:intergenic | 45.0% |
| !! | AAAACTAAAAAATATAAAAA+TGG | + | chr1.4:24158870-24158889 | None:intergenic | 5.0% |
| !! | AAACTAAAAAATATAAAAAT+GGG | + | chr1.4:24158869-24158888 | None:intergenic | 5.0% |
| !! | CAAAATTTAATTATTTAATT+AGG | - | chr1.4:24161520-24161539 | MS.gene88636:intron | 5.0% |
| ACTGGAGCCTGCCAATCATT+CGG | - | chr1.4:24158780-24158799 | MS.gene88636:CDS | 50.0% | |
| ATCTGGTTGGAGTCTTGGAG+AGG | - | chr1.4:24160347-24160366 | MS.gene88636:intron | 50.0% | |
| CACACAAGGCAGTGAATACC+GGG | + | chr1.4:24162280-24162299 | None:intergenic | 50.0% | |
| CAGGAGTGGTCTCAATAAGC+TGG | + | chr1.4:24164263-24164282 | None:intergenic | 50.0% | |
| CTTGAGCCTTCCTGACGATA+GGG | - | chr1.4:24160247-24160266 | MS.gene88636:intron | 50.0% | |
| GCACACAAGGCAGTGAATAC+CGG | + | chr1.4:24162281-24162300 | None:intergenic | 50.0% | |
| GCAGAGAAGGGAATTGGGAA+TGG | + | chr1.4:24163226-24163245 | None:intergenic | 50.0% | |
| GCATAACAAACCGGCACACA+AGG | + | chr1.4:24162294-24162313 | None:intergenic | 50.0% | |
| GCTTGGAGAAAAGCAGGAAG+AGG | + | chr1.4:24163254-24163273 | None:intergenic | 50.0% | |
| GGAACTAAAGGCGACGAAAC+AGG | + | chr1.4:24160839-24160858 | None:intergenic | 50.0% | |
| GGATAGGGATAGCCAGAAAG+AGG | + | chr1.4:24159800-24159819 | None:intergenic | 50.0% | |
| GGGACACAAGTAGCTTCACT+AGG | - | chr1.4:24162821-24162840 | MS.gene88636:intron | 50.0% | |
| GTATTCACTGCCTTGTGTGC+CGG | - | chr1.4:24162281-24162300 | MS.gene88636:CDS | 50.0% | |
| GTGGTCTCAATAAGCTGGTG+TGG | + | chr1.4:24164258-24164277 | None:intergenic | 50.0% | |
| TAGACGAGACCACTCCTGTT+CGG | - | chr1.4:24164313-24164332 | MS.gene88636:intron | 50.0% | |
| TCGTCGCATTCATAAGGGAC+TGG | - | chr1.4:24158762-24158781 | MS.gene88636:CDS | 50.0% | |
| TCTTGAGCCTTCCTGACGAT+AGG | - | chr1.4:24160246-24160265 | MS.gene88636:intron | 50.0% | |
| TTAGCGCTTCGCTCATTCAG+AGG | - | chr1.4:24160444-24160463 | MS.gene88636:intron | 50.0% | |
| TTGACACGTCCAACGAAGCT+TGG | + | chr1.4:24163271-24163290 | None:intergenic | 50.0% | |
| ! | CAGGTGTGGTCTCGTTTTGA+TGG | + | chr1.4:24164407-24164426 | None:intergenic | 50.0% |
| ! | GAAGAGGGAAGTGCAGAGAA+GGG | + | chr1.4:24163238-24163257 | None:intergenic | 50.0% |
| ! | GGAAGTGCAGAGAAGGGAAT+TGG | + | chr1.4:24163232-24163251 | None:intergenic | 50.0% |
| ! | GGGGCTTTGGTTTAGTTGGA+AGG | - | chr1.4:24159267-24159286 | MS.gene88636:intron | 50.0% |
| ! | GGTCAACTTGGTTGCTGCTT+TGG | - | chr1.4:24163485-24163504 | MS.gene88636:intron | 50.0% |
| ! | TCTGAGGAGCTTTTGCTCTG+GGG | + | chr1.4:24159718-24159737 | None:intergenic | 50.0% |
| ! | TTTTCGGCCCTTAACAGGTG+TGG | + | chr1.4:24164421-24164440 | None:intergenic | 50.0% |
| ! | TTTTCGTCCCCAAACAGGAG+TGG | + | chr1.4:24164277-24164296 | None:intergenic | 50.0% |
| !! | CTCTGAGGAGCTTTTGCTCT+GGG | + | chr1.4:24159719-24159738 | None:intergenic | 50.0% |
| !! | TCTCTGAGGAGCTTTTGCTC+TGG | + | chr1.4:24159720-24159739 | None:intergenic | 50.0% |
| !! | TTGGTTGCTGCTTTGGTTCG+TGG | - | chr1.4:24163492-24163511 | MS.gene88636:intron | 50.0% |
| !!! | GCTTTTGCTCTGGGGTTACA+AGG | + | chr1.4:24159710-24159729 | None:intergenic | 50.0% |
| AGACGAGACCACTCCTGTTC+GGG | - | chr1.4:24164314-24164333 | MS.gene88636:intron | 55.0% | |
| GGTGGATCTGGTTGGAGTCT+TGG | - | chr1.4:24160342-24160361 | MS.gene88636:intron | 55.0% | |
| TGAGCACGTGGACCATAACC+CGG | - | chr1.4:24162912-24162931 | MS.gene88636:intron | 55.0% | |
| ! | GGAAGAGGGAAGTGCAGAGA+AGG | + | chr1.4:24163239-24163258 | None:intergenic | 55.0% |
| ! | TTTTCGGTCCCGAACAGGAG+TGG | + | chr1.4:24164325-24164344 | None:intergenic | 55.0% |
| !! | GACTGGAGGGAGCATCTTGA+AGG | - | chr1.4:24162140-24162159 | MS.gene88636:intron | 55.0% |
| !! | TCACCCGGGACTTGTTACAG+AGG | - | chr1.4:24162983-24163002 | MS.gene88636:intron | 55.0% |
| AGGGGTGACTGGTGAGTGCT+AGG | + | chr1.4:24163147-24163166 | None:intergenic | 60.0% | |
| GAGAAAGCGAGAGGGGTGAC+TGG | + | chr1.4:24163158-24163177 | None:intergenic | 60.0% | |
| GGGGTGACTGGTGAGTGCTA+GGG | + | chr1.4:24163146-24163165 | None:intergenic | 60.0% | |
| GGGTCACACTGAGCCTGTGT+TGG | - | chr1.4:24160671-24160690 | MS.gene88636:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 24158727 | 24164509 | 24158727 | ID=MS.gene88636 |
| chr1.4 | mRNA | 24158727 | 24164509 | 24158727 | ID=MS.gene88636.t1;Parent=MS.gene88636 |
| chr1.4 | exon | 24164389 | 24164509 | 24164389 | ID=MS.gene88636.t1.exon1;Parent=MS.gene88636.t1 |
| chr1.4 | CDS | 24164389 | 24164509 | 24164389 | ID=cds.MS.gene88636.t1;Parent=MS.gene88636.t1 |
| chr1.4 | exon | 24164209 | 24164282 | 24164209 | ID=MS.gene88636.t1.exon2;Parent=MS.gene88636.t1 |
| chr1.4 | CDS | 24164209 | 24164282 | 24164209 | ID=cds.MS.gene88636.t1;Parent=MS.gene88636.t1 |
| chr1.4 | exon | 24162281 | 24162448 | 24162281 | ID=MS.gene88636.t1.exon3;Parent=MS.gene88636.t1 |
| chr1.4 | CDS | 24162281 | 24162448 | 24162281 | ID=cds.MS.gene88636.t1;Parent=MS.gene88636.t1 |
| chr1.4 | exon | 24159652 | 24159762 | 24159652 | ID=MS.gene88636.t1.exon4;Parent=MS.gene88636.t1 |
| chr1.4 | CDS | 24159652 | 24159762 | 24159652 | ID=cds.MS.gene88636.t1;Parent=MS.gene88636.t1 |
| chr1.4 | exon | 24159273 | 24159339 | 24159273 | ID=MS.gene88636.t1.exon5;Parent=MS.gene88636.t1 |
| chr1.4 | CDS | 24159273 | 24159339 | 24159273 | ID=cds.MS.gene88636.t1;Parent=MS.gene88636.t1 |
| chr1.4 | exon | 24158727 | 24159178 | 24158727 | ID=MS.gene88636.t1.exon6;Parent=MS.gene88636.t1 |
| chr1.4 | CDS | 24158727 | 24159178 | 24158727 | ID=cds.MS.gene88636.t1;Parent=MS.gene88636.t1 |
| Gene Sequence |
| Protein sequence |
