Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33451.t1 | XP_003604555.1 | 94 | 218 | 10 | 1 | 1 | 218 | 1 | 215 | 3.50E-103 | 384.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33451.t1 | O80920 | 67.1 | 173 | 53 | 2 | 47 | 218 | 37 | 206 | 1.1e-60 | 234.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33451.t1 | G7JKP6 | 94.0 | 218 | 10 | 1 | 1 | 218 | 1 | 215 | 2.5e-103 | 384.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052795 | MS.gene33451 | 0.913188 | 8.22E-84 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33451.t1 | MTR_4g014460 | 95.413 | 218 | 7 | 1 | 1 | 218 | 1 | 215 | 2.32e-151 | 419 |
MS.gene33451.t1 | MTR_7g070050 | 65.775 | 187 | 56 | 3 | 36 | 215 | 1 | 186 | 1.07e-76 | 229 |
MS.gene33451.t1 | MTR_5g083270 | 62.941 | 170 | 58 | 3 | 42 | 209 | 39 | 205 | 2.73e-70 | 213 |
MS.gene33451.t1 | MTR_3g071740 | 61.988 | 171 | 60 | 4 | 47 | 216 | 64 | 230 | 3.95e-69 | 211 |
MS.gene33451.t1 | MTR_1g028380 | 45.902 | 183 | 94 | 2 | 31 | 213 | 5 | 182 | 6.98e-55 | 174 |
MS.gene33451.t1 | MTR_5g030500 | 53.659 | 164 | 72 | 2 | 49 | 208 | 44 | 207 | 8.59e-55 | 174 |
MS.gene33451.t1 | MTR_8g027805 | 48.171 | 164 | 84 | 1 | 49 | 212 | 18 | 180 | 4.59e-54 | 171 |
MS.gene33451.t1 | MTR_1g016480 | 52.500 | 160 | 72 | 3 | 49 | 206 | 39 | 196 | 5.18e-53 | 169 |
MS.gene33451.t1 | MTR_3g090980 | 43.956 | 182 | 97 | 2 | 32 | 213 | 8 | 184 | 1.34e-52 | 168 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33451.t1 | AT2G38310 | 67.052 | 173 | 53 | 2 | 47 | 218 | 37 | 206 | 4.41e-73 | 221 |
MS.gene33451.t1 | AT5G05440 | 64.815 | 162 | 53 | 2 | 45 | 205 | 41 | 199 | 2.15e-70 | 214 |
MS.gene33451.t1 | AT2G40330 | 59.064 | 171 | 65 | 3 | 45 | 211 | 44 | 213 | 3.36e-66 | 203 |
MS.gene33451.t1 | AT5G53160 | 48.485 | 165 | 84 | 1 | 49 | 213 | 19 | 182 | 3.33e-56 | 177 |
MS.gene33451.t1 | AT1G01360 | 47.531 | 162 | 84 | 1 | 52 | 213 | 24 | 184 | 1.37e-55 | 175 |
MS.gene33451.t1 | AT4G01026 | 49.068 | 161 | 81 | 1 | 53 | 213 | 27 | 186 | 1.07e-53 | 171 |
MS.gene33451.t1 | AT2G26040 | 49.398 | 166 | 82 | 1 | 43 | 206 | 16 | 181 | 1.57e-53 | 170 |
MS.gene33451.t1 | AT4G27920 | 46.667 | 165 | 88 | 0 | 49 | 213 | 14 | 178 | 5.11e-52 | 166 |
MS.gene33451.t1 | AT4G17870 | 48.810 | 168 | 85 | 1 | 45 | 211 | 13 | 180 | 7.61e-52 | 166 |
MS.gene33451.t1 | AT1G73000 | 46.199 | 171 | 82 | 4 | 43 | 203 | 31 | 201 | 3.37e-44 | 147 |
MS.gene33451.t1 | AT5G46790 | 49.412 | 170 | 80 | 3 | 45 | 209 | 40 | 208 | 1.05e-43 | 146 |
MS.gene33451.t1 | AT5G46790 | 49.412 | 170 | 80 | 3 | 45 | 209 | 40 | 208 | 1.05e-43 | 146 |
MS.gene33451.t1 | AT5G45860 | 52.055 | 146 | 69 | 1 | 64 | 209 | 12 | 156 | 4.35e-42 | 140 |
MS.gene33451.t1 | AT5G45870 | 50.676 | 148 | 71 | 1 | 64 | 211 | 12 | 157 | 9.77e-42 | 139 |
MS.gene33451.t1 | AT4G18620 | 45.963 | 161 | 80 | 2 | 58 | 211 | 4 | 164 | 2.16e-34 | 120 |
MS.gene33451.t1 | AT5G53160 | 50.495 | 101 | 49 | 1 | 49 | 149 | 19 | 118 | 5.59e-32 | 114 |
Find 73 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTGAAGACTTTGGTGGATT+TGG | 0.227133 | 4.2:-86741194 | None:intergenic |
CGTTCGGTGCTGCGTGCAGC+AGG | 0.323719 | 4.2:-86741542 | None:intergenic |
GGACGACCGCCGAGCATAAT+TGG | 0.334740 | 4.2:-86741367 | None:intergenic |
TGATAGTGGGCTATAGTATT+AGG | 0.336898 | 4.2:-86741323 | None:intergenic |
CAGCAGGGAGGCCAGATATA+AGG | 0.373259 | 4.2:-86741526 | None:intergenic |
TTAGGAATGGTGTTGGTGAC+AGG | 0.377606 | 4.2:-86741305 | None:intergenic |
TGATGGAGGCGGTTGTCTCT+TGG | 0.388404 | 4.2:-86741388 | None:intergenic |
TCCACAGAGGGTGACTGTTC+CGG | 0.392902 | 4.2:+86741665 | MS.gene33451:CDS |
AGGGAGGTCAACCTTATATC+TGG | 0.399072 | 4.2:+86741515 | MS.gene33451:CDS |
CACTGACCAAACGGCGGTGA+TGG | 0.428126 | 4.2:-86741405 | None:intergenic |
ATATTGAGTGTGTGTGATAG+TGG | 0.451535 | 4.2:-86741337 | None:intergenic |
GAAGACTTTGGTGGATTTGG+AGG | 0.457214 | 4.2:-86741191 | None:intergenic |
CCGCCTCCATCACCGCCGTT+TGG | 0.479222 | 4.2:+86741399 | MS.gene33451:CDS |
ATCGAGGATCTCAAGGCGTT+CGG | 0.483659 | 4.2:-86741558 | None:intergenic |
CGTTGGTGGCGACGGTGATG+TGG | 0.489155 | 4.2:+86741484 | MS.gene33451:CDS |
GCGGCGAACCACTGACCAAA+CGG | 0.490188 | 4.2:-86741414 | None:intergenic |
CTATGTGGTGGATATTCCTT+CGG | 0.490303 | 4.2:+86741706 | MS.gene33451:CDS |
GAGGTCGTGGTGGTTGGTGA+TGG | 0.514354 | 4.2:-86741252 | None:intergenic |
GCCGTGGAGGTCGTGGTGGT+TGG | 0.515521 | 4.2:-86741258 | None:intergenic |
AGTCTTCACTTCTCCTCCAC+AGG | 0.523366 | 4.2:+86741207 | MS.gene33451:CDS |
TGTTTGTTGATACAATTGTT+CGG | 0.525160 | 4.2:+86741753 | MS.gene33451:CDS |
CATCACCGCCGTTTGGTCAG+TGG | 0.527329 | 4.2:+86741406 | MS.gene33451:CDS |
TATAGTATTAGGAATGGTGT+TGG | 0.528924 | 4.2:-86741312 | None:intergenic |
AGGAGAAGTGAAGACTTTGG+TGG | 0.533916 | 4.2:-86741200 | None:intergenic |
ACGGTGATGTGGGCACACTC+AGG | 0.539446 | 4.2:+86741495 | MS.gene33451:CDS |
CCAAACGGCGGTGATGGAGG+CGG | 0.539681 | 4.2:-86741399 | None:intergenic |
TGTAACCTCGTTGGTGGCGA+CGG | 0.546094 | 4.2:+86741476 | MS.gene33451:CDS |
ATCAAGAGTTGTAACCTCGT+TGG | 0.547255 | 4.2:+86741467 | MS.gene33451:CDS |
GTTGGTGATGGTCGTAGTGG+TGG | 0.548645 | 4.2:-86741240 | None:intergenic |
CGGTGATGTGGGCACACTCA+GGG | 0.556265 | 4.2:+86741496 | MS.gene33451:CDS |
GTTCGGTGCTGCGTGCAGCA+GGG | 0.556567 | 4.2:-86741541 | None:intergenic |
CAACACTAAAACTGATGACA+TGG | 0.557856 | 4.2:-86741589 | None:intergenic |
GATCCTCATCGAGGATCTCA+AGG | 0.566346 | 4.2:-86741565 | None:intergenic |
TAGGAATGGTGTTGGTGACA+GGG | 0.566710 | 4.2:-86741304 | None:intergenic |
AAGAGTTGTAACCTCGTTGG+TGG | 0.571438 | 4.2:+86741470 | MS.gene33451:CDS |
AGGCTTGTGGTTTGTCGAAG+CGG | 0.573243 | 4.2:-86741433 | None:intergenic |
GGAACAGTCACCCTCTGTGG+AGG | 0.574183 | 4.2:-86741663 | None:intergenic |
TGGTGACAGGGTTGATGAAG+AGG | 0.574991 | 4.2:-86741292 | None:intergenic |
TGGTGGTGTGGTTGATCCTG+TGG | 0.579437 | 4.2:-86741223 | None:intergenic |
TCCTTCGGAAAATACTAAAG+AGG | 0.584494 | 4.2:+86741721 | MS.gene33451:CDS |
ATCATCCGACCAATTATGCT+CGG | 0.584649 | 4.2:+86741358 | MS.gene33451:CDS |
TGACCAAACGGCGGTGATGG+AGG | 0.585643 | 4.2:-86741402 | None:intergenic |
ACACTTCATCCCTCCACAGA+GGG | 0.594198 | 4.2:+86741653 | MS.gene33451:CDS |
CGGTTTGTGCAAGTGACTGA+AGG | 0.594264 | 4.2:-86741781 | None:intergenic |
GGTGACAGGGTTGATGAAGA+GGG | 0.596139 | 4.2:-86741291 | None:intergenic |
GCCGGAACAGTCACCCTCTG+TGG | 0.599614 | 4.2:-86741666 | None:intergenic |
GGACTCAACTATCACCGTGC+CGG | 0.603129 | 4.2:-86741684 | None:intergenic |
GAACAGTCACCCTCTGTGGA+GGG | 0.606405 | 4.2:-86741662 | None:intergenic |
GACCGCCGAGCATAATTGGT+CGG | 0.608055 | 4.2:-86741363 | None:intergenic |
GTGGGCTATAGTATTAGGAA+TGG | 0.608376 | 4.2:-86741318 | None:intergenic |
GTTGGTGGCGACGGTGATGT+GGG | 0.610157 | 4.2:+86741485 | MS.gene33451:CDS |
CGAAGGAATATCCACCACAT+AGG | 0.619850 | 4.2:-86741705 | None:intergenic |
TGGAGGAGAAGTGAAGACTT+TGG | 0.627794 | 4.2:-86741203 | None:intergenic |
ACCAACCACCACGACCTCCA+CGG | 0.628316 | 4.2:+86741257 | MS.gene33451:CDS |
AGAGGGTGACTGTTCCGGCA+CGG | 0.639448 | 4.2:+86741670 | MS.gene33451:CDS |
GGAGGGATGAAGTGTAGTAA+CGG | 0.646842 | 4.2:-86741645 | None:intergenic |
TGATGGTCGTAGTGGTGGTG+TGG | 0.646910 | 4.2:-86741235 | None:intergenic |
GTGGTTGGTGATGGTCGTAG+TGG | 0.657655 | 4.2:-86741243 | None:intergenic |
CGGTGCTGCGTGCAGCAGGG+AGG | 0.659975 | 4.2:-86741538 | None:intergenic |
TATTGAGTGTGTGTGATAGT+GGG | 0.661022 | 4.2:-86741336 | None:intergenic |
TGGTGTGGTTGATCCTGTGG+AGG | 0.662950 | 4.2:-86741220 | None:intergenic |
GATGAAGTGTAGTAACGGAA+CGG | 0.672049 | 4.2:-86741640 | None:intergenic |
ACGCCTTGAGATCCTCGATG+AGG | 0.696994 | 4.2:+86741562 | MS.gene33451:CDS |
TTTCGCCGTGGAGGTCGTGG+TGG | 0.698954 | 4.2:-86741262 | None:intergenic |
ATCCGACCAATTATGCTCGG+CGG | 0.704061 | 4.2:+86741361 | MS.gene33451:CDS |
TTGCTGTGTAATGTTCTCTG+CGG | 0.706407 | 4.2:-86741801 | None:intergenic |
GATAGTTGAGTCCTATGTGG+TGG | 0.708119 | 4.2:+86741694 | MS.gene33451:CDS |
GGTGATAGTTGAGTCCTATG+TGG | 0.715010 | 4.2:+86741691 | MS.gene33451:CDS |
TGATGTGGGCACACTCAGGG+AGG | 0.725955 | 4.2:+86741499 | MS.gene33451:CDS |
CATCACCGTCGCCACCAACG+AGG | 0.726271 | 4.2:-86741481 | None:intergenic |
TACACTTCATCCCTCCACAG+AGG | 0.732326 | 4.2:+86741652 | MS.gene33451:CDS |
TGACATGGCGATCCTCATCG+AGG | 0.742190 | 4.2:-86741574 | None:intergenic |
GCGAACCACTGACCAAACGG+CGG | 0.744614 | 4.2:-86741411 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTCTTGATGAAATTTTTGT+AGG | - | chr4.2:86741456-86741475 | None:intergenic | 25.0% |
!! | TGTTTGTTGATACAATTGTT+CGG | + | chr4.2:86741753-86741772 | MS.gene33451:CDS | 25.0% |
TATAGTATTAGGAATGGTGT+TGG | - | chr4.2:86741315-86741334 | None:intergenic | 30.0% | |
! | ATGAAATTTTTGTAGGCTTG+TGG | - | chr4.2:86741449-86741468 | None:intergenic | 30.0% |
ATATTGAGTGTGTGTGATAG+TGG | - | chr4.2:86741340-86741359 | None:intergenic | 35.0% | |
CAACACTAAAACTGATGACA+TGG | - | chr4.2:86741592-86741611 | None:intergenic | 35.0% | |
TATTGAGTGTGTGTGATAGT+GGG | - | chr4.2:86741339-86741358 | None:intergenic | 35.0% | |
TCCTTCGGAAAATACTAAAG+AGG | + | chr4.2:86741721-86741740 | MS.gene33451:CDS | 35.0% | |
! | TCCTCTTTAGTATTTTCCGA+AGG | - | chr4.2:86741725-86741744 | None:intergenic | 35.0% |
!! | ATCAGTTTTAGTGTTGTTGG+TGG | + | chr4.2:86741596-86741615 | MS.gene33451:CDS | 35.0% |
!! | GTCATCAGTTTTAGTGTTGT+TGG | + | chr4.2:86741593-86741612 | MS.gene33451:CDS | 35.0% |
!! | TGATAGTGGGCTATAGTATT+AGG | - | chr4.2:86741326-86741345 | None:intergenic | 35.0% |
ATCAAGAGTTGTAACCTCGT+TGG | + | chr4.2:86741467-86741486 | MS.gene33451:CDS | 40.0% | |
ATCATCCGACCAATTATGCT+CGG | + | chr4.2:86741358-86741377 | MS.gene33451:CDS | 40.0% | |
TTGCTGTGTAATGTTCTCTG+CGG | - | chr4.2:86741804-86741823 | None:intergenic | 40.0% | |
! | GATGAAGTGTAGTAACGGAA+CGG | - | chr4.2:86741643-86741662 | None:intergenic | 40.0% |
! | GTGGGCTATAGTATTAGGAA+TGG | - | chr4.2:86741321-86741340 | None:intergenic | 40.0% |
!! | AGTGAAGACTTTGGTGGATT+TGG | - | chr4.2:86741197-86741216 | None:intergenic | 40.0% |
!! | CTATGTGGTGGATATTCCTT+CGG | + | chr4.2:86741706-86741725 | MS.gene33451:CDS | 40.0% |
AAGAGTTGTAACCTCGTTGG+TGG | + | chr4.2:86741470-86741489 | MS.gene33451:CDS | 45.0% | |
AGGAGAAGTGAAGACTTTGG+TGG | - | chr4.2:86741203-86741222 | None:intergenic | 45.0% | |
AGGGAGGTCAACCTTATATC+TGG | + | chr4.2:86741515-86741534 | MS.gene33451:CDS | 45.0% | |
CGAAGGAATATCCACCACAT+AGG | - | chr4.2:86741708-86741727 | None:intergenic | 45.0% | |
GATAGTTGAGTCCTATGTGG+TGG | + | chr4.2:86741694-86741713 | MS.gene33451:CDS | 45.0% | |
GGAGGGATGAAGTGTAGTAA+CGG | - | chr4.2:86741648-86741667 | None:intergenic | 45.0% | |
GGTGATAGTTGAGTCCTATG+TGG | + | chr4.2:86741691-86741710 | MS.gene33451:CDS | 45.0% | |
TGGAGGAGAAGTGAAGACTT+TGG | - | chr4.2:86741206-86741225 | None:intergenic | 45.0% | |
!! | GAAGACTTTGGTGGATTTGG+AGG | - | chr4.2:86741194-86741213 | None:intergenic | 45.0% |
!! | TAGGAATGGTGTTGGTGACA+GGG | - | chr4.2:86741307-86741326 | None:intergenic | 45.0% |
!! | TTAGGAATGGTGTTGGTGAC+AGG | - | chr4.2:86741308-86741327 | None:intergenic | 45.0% |
ACACTTCATCCCTCCACAGA+GGG | + | chr4.2:86741653-86741672 | MS.gene33451:CDS | 50.0% | |
AGTCTTCACTTCTCCTCCAC+AGG | + | chr4.2:86741207-86741226 | MS.gene33451:CDS | 50.0% | |
ATCCGACCAATTATGCTCGG+CGG | + | chr4.2:86741361-86741380 | MS.gene33451:CDS | 50.0% | |
CGGTTTGTGCAAGTGACTGA+AGG | - | chr4.2:86741784-86741803 | None:intergenic | 50.0% | |
GATCCTCATCGAGGATCTCA+AGG | - | chr4.2:86741568-86741587 | None:intergenic | 50.0% | |
TACACTTCATCCCTCCACAG+AGG | + | chr4.2:86741652-86741671 | MS.gene33451:CDS | 50.0% | |
! | AGGCTTGTGGTTTGTCGAAG+CGG | - | chr4.2:86741436-86741455 | None:intergenic | 50.0% |
! | ATCGAGGATCTCAAGGCGTT+CGG | - | chr4.2:86741561-86741580 | None:intergenic | 50.0% |
!! | GGTGACAGGGTTGATGAAGA+GGG | - | chr4.2:86741294-86741313 | None:intergenic | 50.0% |
!! | TGGTGACAGGGTTGATGAAG+AGG | - | chr4.2:86741295-86741314 | None:intergenic | 50.0% |
ACGCCTTGAGATCCTCGATG+AGG | + | chr4.2:86741562-86741581 | MS.gene33451:CDS | 55.0% | |
CAGCAGGGAGGCCAGATATA+AGG | - | chr4.2:86741529-86741548 | None:intergenic | 55.0% | |
GAACAGTCACCCTCTGTGGA+GGG | - | chr4.2:86741665-86741684 | None:intergenic | 55.0% | |
GACCGCCGAGCATAATTGGT+CGG | - | chr4.2:86741366-86741385 | None:intergenic | 55.0% | |
GGACTCAACTATCACCGTGC+CGG | - | chr4.2:86741687-86741706 | None:intergenic | 55.0% | |
TCCACAGAGGGTGACTGTTC+CGG | + | chr4.2:86741665-86741684 | MS.gene33451:CDS | 55.0% | |
TGACATGGCGATCCTCATCG+AGG | - | chr4.2:86741577-86741596 | None:intergenic | 55.0% | |
TGATGGAGGCGGTTGTCTCT+TGG | - | chr4.2:86741391-86741410 | None:intergenic | 55.0% | |
TGGTGTGGTTGATCCTGTGG+AGG | - | chr4.2:86741223-86741242 | None:intergenic | 55.0% | |
! | TGATGGTCGTAGTGGTGGTG+TGG | - | chr4.2:86741238-86741257 | None:intergenic | 55.0% |
! | TGGTGGTGTGGTTGATCCTG+TGG | - | chr4.2:86741226-86741245 | None:intergenic | 55.0% |
!! | GTGGTTGGTGATGGTCGTAG+TGG | - | chr4.2:86741246-86741265 | None:intergenic | 55.0% |
!! | GTTGGTGATGGTCGTAGTGG+TGG | - | chr4.2:86741243-86741262 | None:intergenic | 55.0% |
!! | TGTAACCTCGTTGGTGGCGA+CGG | + | chr4.2:86741476-86741495 | MS.gene33451:CDS | 55.0% |
!!! | AGAGGGTGTTGTTTTCGCCG+TGG | - | chr4.2:86741277-86741296 | None:intergenic | 55.0% |
ACCAACCACCACGACCTCCA+CGG | + | chr4.2:86741257-86741276 | MS.gene33451:CDS | 60.0% | |
ACGGTGATGTGGGCACACTC+AGG | + | chr4.2:86741495-86741514 | MS.gene33451:CDS | 60.0% | |
AGAGGGTGACTGTTCCGGCA+CGG | + | chr4.2:86741670-86741689 | MS.gene33451:CDS | 60.0% | |
CACTGACCAAACGGCGGTGA+TGG | - | chr4.2:86741408-86741427 | None:intergenic | 60.0% | |
CATCACCGCCGTTTGGTCAG+TGG | + | chr4.2:86741406-86741425 | MS.gene33451:CDS | 60.0% | |
CGGTGATGTGGGCACACTCA+GGG | + | chr4.2:86741496-86741515 | MS.gene33451:CDS | 60.0% | |
GCGAACCACTGACCAAACGG+CGG | - | chr4.2:86741414-86741433 | None:intergenic | 60.0% | |
GCGGCGAACCACTGACCAAA+CGG | - | chr4.2:86741417-86741436 | None:intergenic | 60.0% | |
GGAACAGTCACCCTCTGTGG+AGG | - | chr4.2:86741666-86741685 | None:intergenic | 60.0% | |
GGACGACCGCCGAGCATAAT+TGG | - | chr4.2:86741370-86741389 | None:intergenic | 60.0% | |
TGATGTGGGCACACTCAGGG+AGG | + | chr4.2:86741499-86741518 | MS.gene33451:CDS | 60.0% | |
! | TGACCAAACGGCGGTGATGG+AGG | - | chr4.2:86741405-86741424 | None:intergenic | 60.0% |
! | TGTTTTCGCCGTGGAGGTCG+TGG | - | chr4.2:86741268-86741287 | None:intergenic | 60.0% |
!! | GAGGTCGTGGTGGTTGGTGA+TGG | - | chr4.2:86741255-86741274 | None:intergenic | 60.0% |
!! | GTTGGTGGCGACGGTGATGT+GGG | + | chr4.2:86741485-86741504 | MS.gene33451:CDS | 60.0% |
!!! | GGGTGTTGTTTTCGCCGTGG+AGG | - | chr4.2:86741274-86741293 | None:intergenic | 60.0% |
CATCACCGTCGCCACCAACG+AGG | - | chr4.2:86741484-86741503 | None:intergenic | 65.0% | |
GCCGGAACAGTCACCCTCTG+TGG | - | chr4.2:86741669-86741688 | None:intergenic | 65.0% | |
TTTCGCCGTGGAGGTCGTGG+TGG | - | chr4.2:86741265-86741284 | None:intergenic | 65.0% | |
!! | CCAAACGGCGGTGATGGAGG+CGG | - | chr4.2:86741402-86741421 | None:intergenic | 65.0% |
!! | CGTTGGTGGCGACGGTGATG+TGG | + | chr4.2:86741484-86741503 | MS.gene33451:CDS | 65.0% |
!! | GTTCGGTGCTGCGTGCAGCA+GGG | - | chr4.2:86741544-86741563 | None:intergenic | 65.0% |
CCGCCTCCATCACCGCCGTT+TGG | + | chr4.2:86741399-86741418 | MS.gene33451:CDS | 70.0% | |
GCCGTGGAGGTCGTGGTGGT+TGG | - | chr4.2:86741261-86741280 | None:intergenic | 70.0% | |
!! | CGTTCGGTGCTGCGTGCAGC+AGG | - | chr4.2:86741545-86741564 | None:intergenic | 70.0% |
!! | CGGTGCTGCGTGCAGCAGGG+AGG | - | chr4.2:86741541-86741560 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 86741188 | 86741844 | 86741188 | ID=MS.gene33451 |
chr4.2 | mRNA | 86741188 | 86741844 | 86741188 | ID=MS.gene33451.t1;Parent=MS.gene33451 |
chr4.2 | exon | 86741188 | 86741844 | 86741188 | ID=MS.gene33451.t1.exon1;Parent=MS.gene33451.t1 |
chr4.2 | CDS | 86741188 | 86741844 | 86741188 | ID=cds.MS.gene33451.t1;Parent=MS.gene33451.t1 |
Gene Sequence |
Protein sequence |