Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052795.t1 | XP_003604555.1 | 90.8 | 218 | 17 | 1 | 1 | 218 | 1 | 215 | 1.70E-97 | 365.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052795.t1 | O80920 | 67.1 | 173 | 53 | 2 | 47 | 218 | 37 | 206 | 1.1e-60 | 234.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052795.t1 | G7JKP6 | 90.8 | 218 | 17 | 1 | 1 | 218 | 1 | 215 | 1.2e-97 | 365.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052795 | MS.gene054809 | 0.802852 | 4.61E-49 | -1.69E-46 |
| MS.gene052795 | MS.gene054810 | 0.809716 | 1.65E-50 | -1.69E-46 |
| MS.gene052795 | MS.gene055767 | 0.820675 | 6.05E-53 | -1.69E-46 |
| MS.gene052795 | MS.gene069194 | 0.819476 | 1.14E-52 | -1.69E-46 |
| MS.gene052795 | MS.gene29692 | 0.854289 | 1.36E-61 | -1.69E-46 |
| MS.gene052795 | MS.gene33451 | 0.913188 | 8.22E-84 | -1.69E-46 |
| MS.gene052795 | MS.gene51080 | 0.850322 | 1.83E-60 | -1.69E-46 |
| MS.gene052795 | MS.gene60310 | 0.803433 | 3.49E-49 | -1.69E-46 |
| MS.gene052795 | MS.gene67442 | 0.811027 | 8.60E-51 | -1.69E-46 |
| MS.gene052795 | MS.gene76095 | 0.844841 | 5.89E-59 | -1.69E-46 |
| MS.gene052795 | MS.gene93372 | 0.897313 | 1.59E-76 | -1.69E-46 |
| MS.gene052795 | MS.gene94210 | 0.848028 | 7.95E-60 | -1.69E-46 |
| MS.gene052795 | MS.gene95677 | 0.815934 | 7.17E-52 | -1.69E-46 |
| MS.gene052795 | MS.gene98039 | 0.805928 | 1.05E-49 | -1.69E-46 |
| MS.gene052795 | MS.gene99506 | 0.846667 | 1.88E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052795.t1 | MTR_4g014460 | 94.954 | 218 | 8 | 1 | 1 | 218 | 1 | 215 | 2.59e-150 | 416 |
| MS.gene052795.t1 | MTR_7g070050 | 65.775 | 187 | 56 | 3 | 36 | 215 | 1 | 186 | 8.20e-77 | 229 |
| MS.gene052795.t1 | MTR_5g083270 | 62.941 | 170 | 58 | 3 | 42 | 209 | 39 | 205 | 2.34e-70 | 213 |
| MS.gene052795.t1 | MTR_3g071740 | 61.988 | 171 | 60 | 4 | 47 | 216 | 64 | 230 | 4.13e-69 | 211 |
| MS.gene052795.t1 | MTR_1g028380 | 45.902 | 183 | 94 | 2 | 31 | 213 | 5 | 182 | 6.47e-55 | 174 |
| MS.gene052795.t1 | MTR_5g030500 | 53.659 | 164 | 72 | 2 | 49 | 208 | 44 | 207 | 6.48e-55 | 174 |
| MS.gene052795.t1 | MTR_8g027805 | 47.879 | 165 | 85 | 1 | 49 | 213 | 18 | 181 | 3.89e-54 | 172 |
| MS.gene052795.t1 | MTR_3g090980 | 44.086 | 186 | 98 | 3 | 29 | 213 | 4 | 184 | 5.55e-53 | 169 |
| MS.gene052795.t1 | MTR_1g016480 | 52.500 | 160 | 72 | 3 | 49 | 206 | 39 | 196 | 5.65e-53 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052795.t1 | AT2G38310 | 67.052 | 173 | 53 | 2 | 47 | 218 | 37 | 206 | 3.87e-73 | 221 |
| MS.gene052795.t1 | AT5G05440 | 64.815 | 162 | 53 | 2 | 45 | 205 | 41 | 199 | 2.02e-70 | 214 |
| MS.gene052795.t1 | AT2G40330 | 59.064 | 171 | 65 | 3 | 45 | 211 | 44 | 213 | 2.73e-66 | 204 |
| MS.gene052795.t1 | AT5G53160 | 48.485 | 165 | 84 | 1 | 49 | 213 | 19 | 182 | 2.89e-56 | 177 |
| MS.gene052795.t1 | AT1G01360 | 47.531 | 162 | 84 | 1 | 52 | 213 | 24 | 184 | 1.12e-55 | 176 |
| MS.gene052795.t1 | AT4G01026 | 49.068 | 161 | 81 | 1 | 53 | 213 | 27 | 186 | 8.46e-54 | 172 |
| MS.gene052795.t1 | AT2G26040 | 49.398 | 166 | 82 | 1 | 43 | 206 | 16 | 181 | 1.49e-53 | 170 |
| MS.gene052795.t1 | AT4G27920 | 46.667 | 165 | 88 | 0 | 49 | 213 | 14 | 178 | 5.11e-52 | 166 |
| MS.gene052795.t1 | AT4G17870 | 48.810 | 168 | 85 | 1 | 45 | 211 | 13 | 180 | 6.68e-52 | 166 |
| MS.gene052795.t1 | AT1G73000 | 46.199 | 171 | 82 | 4 | 43 | 203 | 31 | 201 | 3.48e-44 | 147 |
| MS.gene052795.t1 | AT5G46790 | 49.412 | 170 | 80 | 3 | 45 | 209 | 40 | 208 | 9.56e-44 | 146 |
| MS.gene052795.t1 | AT5G46790 | 49.412 | 170 | 80 | 3 | 45 | 209 | 40 | 208 | 9.56e-44 | 146 |
| MS.gene052795.t1 | AT5G45860 | 52.055 | 146 | 69 | 1 | 64 | 209 | 12 | 156 | 4.35e-42 | 140 |
| MS.gene052795.t1 | AT5G45870 | 50.676 | 148 | 71 | 1 | 64 | 211 | 12 | 157 | 9.15e-42 | 139 |
| MS.gene052795.t1 | AT4G18620 | 45.963 | 161 | 80 | 2 | 58 | 211 | 4 | 164 | 2.07e-34 | 120 |
| MS.gene052795.t1 | AT5G53160 | 50.495 | 101 | 49 | 1 | 49 | 149 | 19 | 118 | 4.71e-32 | 114 |
Find 72 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGAAGACTTTGGTGGATT+TGG | 0.227133 | 4.4:-86285083 | None:intergenic |
| CGTTCGGTGCTGCGTGCAGC+AGG | 0.323719 | 4.4:-86285431 | None:intergenic |
| GGACGACCGCCGAGCATAAT+TGG | 0.334740 | 4.4:-86285256 | None:intergenic |
| TGATAGTGGGCTATAGTATT+AGG | 0.336898 | 4.4:-86285212 | None:intergenic |
| CAGCAGGGAGGCCAGATATA+AGG | 0.373259 | 4.4:-86285415 | None:intergenic |
| TTAGGAATGGTGTTGGTGAC+AGG | 0.377606 | 4.4:-86285194 | None:intergenic |
| TGATGGAGGCGGTTGTCTCT+TGG | 0.388404 | 4.4:-86285277 | None:intergenic |
| TCCACAGAGGGTGACTGTTC+CGG | 0.392902 | 4.4:+86285554 | MS.gene052795:CDS |
| AGGGAGGTCAACCTTATATC+TGG | 0.399072 | 4.4:+86285404 | MS.gene052795:CDS |
| CACTGACCAAACGGCGGTGA+TGG | 0.428126 | 4.4:-86285294 | None:intergenic |
| ATATTGAGTGTGTGTGATAG+TGG | 0.451535 | 4.4:-86285226 | None:intergenic |
| GAAGACTTTGGTGGATTTGG+AGG | 0.457214 | 4.4:-86285080 | None:intergenic |
| CCGCCTCCATCACCGCCGTT+TGG | 0.479222 | 4.4:+86285288 | MS.gene052795:CDS |
| ATCGAGGATCTCAAGGCGTT+CGG | 0.483659 | 4.4:-86285447 | None:intergenic |
| CTATGTAGTGGATATTCCTT+CGG | 0.488058 | 4.4:+86285595 | MS.gene052795:CDS |
| CGTTGGTGGCGACGGTGATG+TGG | 0.489155 | 4.4:+86285373 | MS.gene052795:CDS |
| GCGGCGAACCACTGACCAAA+CGG | 0.490188 | 4.4:-86285303 | None:intergenic |
| GCCGTTGAGGTCGTGGTGGT+TGG | 0.491967 | 4.4:-86285147 | None:intergenic |
| AGTCTTCACTTCTCCTCCAC+AGG | 0.523366 | 4.4:+86285096 | MS.gene052795:CDS |
| TGTTTGTTGATACAATTGTT+CGG | 0.525160 | 4.4:+86285642 | MS.gene052795:CDS |
| CATCACCGCCGTTTGGTCAG+TGG | 0.527329 | 4.4:+86285295 | MS.gene052795:CDS |
| TATAGTATTAGGAATGGTGT+TGG | 0.528924 | 4.4:-86285201 | None:intergenic |
| AGGAGAAGTGAAGACTTTGG+TGG | 0.533916 | 4.4:-86285089 | None:intergenic |
| ACGGTGATGTGGGCACACTC+AGG | 0.539446 | 4.4:+86285384 | MS.gene052795:CDS |
| CCAAACGGCGGTGATGGAGG+CGG | 0.539681 | 4.4:-86285288 | None:intergenic |
| TGTAACCTCGTTGGTGGCGA+CGG | 0.546094 | 4.4:+86285365 | MS.gene052795:CDS |
| ATCAAGAGTTGTAACCTCGT+TGG | 0.547255 | 4.4:+86285356 | MS.gene052795:CDS |
| GTTGGTGATGGTCGTAGTGG+TGG | 0.548645 | 4.4:-86285129 | None:intergenic |
| CGAAGGAATATCCACTACAT+AGG | 0.552473 | 4.4:-86285594 | None:intergenic |
| CGGTGATGTGGGCACACTCA+GGG | 0.556265 | 4.4:+86285385 | MS.gene052795:CDS |
| GTTCGGTGCTGCGTGCAGCA+GGG | 0.556567 | 4.4:-86285430 | None:intergenic |
| CAACACTAAAACTGATGACA+TGG | 0.557856 | 4.4:-86285478 | None:intergenic |
| GAGGTCGTGGTGGTTGGTGA+TGG | 0.563623 | 4.4:-86285141 | None:intergenic |
| GATCCTCATCGAGGATCTCA+AGG | 0.566346 | 4.4:-86285454 | None:intergenic |
| TAGGAATGGTGTTGGTGACA+GGG | 0.566710 | 4.4:-86285193 | None:intergenic |
| AAGAGTTGTAACCTCGTTGG+TGG | 0.571438 | 4.4:+86285359 | MS.gene052795:CDS |
| AGGCTTGTGGTTTGTCGAAG+CGG | 0.573243 | 4.4:-86285322 | None:intergenic |
| GGAACAGTCACCCTCTGTGG+AGG | 0.574183 | 4.4:-86285552 | None:intergenic |
| TGGTGACAGGGTTGATGAAG+AGG | 0.574991 | 4.4:-86285181 | None:intergenic |
| TGGTGGTGTGGTTGATCCTG+TGG | 0.579437 | 4.4:-86285112 | None:intergenic |
| TCCTTCGGAAAATACTAAAG+AGG | 0.584494 | 4.4:+86285610 | MS.gene052795:CDS |
| ATCATCCGACCAATTATGCT+CGG | 0.584649 | 4.4:+86285247 | MS.gene052795:CDS |
| TGACCAAACGGCGGTGATGG+AGG | 0.585643 | 4.4:-86285291 | None:intergenic |
| ACACTTCATCCCTCCACAGA+GGG | 0.594198 | 4.4:+86285542 | MS.gene052795:CDS |
| CGGTTTGTGCAAGTGACTGA+AGG | 0.594264 | 4.4:-86285670 | None:intergenic |
| GATAGTTGAGTCCTATGTAG+TGG | 0.595701 | 4.4:+86285583 | MS.gene052795:CDS |
| GGTGACAGGGTTGATGAAGA+GGG | 0.596139 | 4.4:-86285180 | None:intergenic |
| GCCGGAACAGTCACCCTCTG+TGG | 0.599614 | 4.4:-86285555 | None:intergenic |
| GGACTCAACTATCACCGTGC+CGG | 0.603129 | 4.4:-86285573 | None:intergenic |
| GAACAGTCACCCTCTGTGGA+GGG | 0.606405 | 4.4:-86285551 | None:intergenic |
| GACCGCCGAGCATAATTGGT+CGG | 0.608055 | 4.4:-86285252 | None:intergenic |
| GTGGGCTATAGTATTAGGAA+TGG | 0.608376 | 4.4:-86285207 | None:intergenic |
| GTTGGTGGCGACGGTGATGT+GGG | 0.610157 | 4.4:+86285374 | MS.gene052795:CDS |
| TGGAGGAGAAGTGAAGACTT+TGG | 0.627794 | 4.4:-86285092 | None:intergenic |
| ACCAACCACCACGACCTCAA+CGG | 0.633346 | 4.4:+86285146 | MS.gene052795:CDS |
| AGAGGGTGACTGTTCCGGCA+CGG | 0.639448 | 4.4:+86285559 | MS.gene052795:CDS |
| GGAGGGATGAAGTGTAGTAA+CGG | 0.646842 | 4.4:-86285534 | None:intergenic |
| TGATGGTCGTAGTGGTGGTG+TGG | 0.646910 | 4.4:-86285124 | None:intergenic |
| GTGGTTGGTGATGGTCGTAG+TGG | 0.657655 | 4.4:-86285132 | None:intergenic |
| CGGTGCTGCGTGCAGCAGGG+AGG | 0.659975 | 4.4:-86285427 | None:intergenic |
| TATTGAGTGTGTGTGATAGT+GGG | 0.661022 | 4.4:-86285225 | None:intergenic |
| TGGTGTGGTTGATCCTGTGG+AGG | 0.662950 | 4.4:-86285109 | None:intergenic |
| GATGAAGTGTAGTAACGGAA+CGG | 0.672049 | 4.4:-86285529 | None:intergenic |
| ACGCCTTGAGATCCTCGATG+AGG | 0.696994 | 4.4:+86285451 | MS.gene052795:CDS |
| ATCCGACCAATTATGCTCGG+CGG | 0.704061 | 4.4:+86285250 | MS.gene052795:CDS |
| TTGCTGTGTAATGTTCTCTG+CGG | 0.706407 | 4.4:-86285690 | None:intergenic |
| TTTCGCCGTTGAGGTCGTGG+TGG | 0.717570 | 4.4:-86285151 | None:intergenic |
| TGATGTGGGCACACTCAGGG+AGG | 0.725955 | 4.4:+86285388 | MS.gene052795:CDS |
| CATCACCGTCGCCACCAACG+AGG | 0.726271 | 4.4:-86285370 | None:intergenic |
| TACACTTCATCCCTCCACAG+AGG | 0.732326 | 4.4:+86285541 | MS.gene052795:CDS |
| TGACATGGCGATCCTCATCG+AGG | 0.742190 | 4.4:-86285463 | None:intergenic |
| GCGAACCACTGACCAAACGG+CGG | 0.744614 | 4.4:-86285300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTCTTGATGAAATTTTTGT+AGG | - | chr4.4:86285345-86285364 | None:intergenic | 25.0% |
| !! | TGTTTGTTGATACAATTGTT+CGG | + | chr4.4:86285642-86285661 | MS.gene052795:CDS | 25.0% |
| TATAGTATTAGGAATGGTGT+TGG | - | chr4.4:86285204-86285223 | None:intergenic | 30.0% | |
| ! | ATGAAATTTTTGTAGGCTTG+TGG | - | chr4.4:86285338-86285357 | None:intergenic | 30.0% |
| ATATTGAGTGTGTGTGATAG+TGG | - | chr4.4:86285229-86285248 | None:intergenic | 35.0% | |
| CAACACTAAAACTGATGACA+TGG | - | chr4.4:86285481-86285500 | None:intergenic | 35.0% | |
| TATTGAGTGTGTGTGATAGT+GGG | - | chr4.4:86285228-86285247 | None:intergenic | 35.0% | |
| TCCTTCGGAAAATACTAAAG+AGG | + | chr4.4:86285610-86285629 | MS.gene052795:CDS | 35.0% | |
| ! | TCCTCTTTAGTATTTTCCGA+AGG | - | chr4.4:86285614-86285633 | None:intergenic | 35.0% |
| !! | ATCAGTTTTAGTGTTGTTGG+TGG | + | chr4.4:86285485-86285504 | MS.gene052795:CDS | 35.0% |
| !! | CTATGTAGTGGATATTCCTT+CGG | + | chr4.4:86285595-86285614 | MS.gene052795:CDS | 35.0% |
| !! | GTCATCAGTTTTAGTGTTGT+TGG | + | chr4.4:86285482-86285501 | MS.gene052795:CDS | 35.0% |
| !! | TGATAGTGGGCTATAGTATT+AGG | - | chr4.4:86285215-86285234 | None:intergenic | 35.0% |
| ATCAAGAGTTGTAACCTCGT+TGG | + | chr4.4:86285356-86285375 | MS.gene052795:CDS | 40.0% | |
| ATCATCCGACCAATTATGCT+CGG | + | chr4.4:86285247-86285266 | MS.gene052795:CDS | 40.0% | |
| CGAAGGAATATCCACTACAT+AGG | - | chr4.4:86285597-86285616 | None:intergenic | 40.0% | |
| GATAGTTGAGTCCTATGTAG+TGG | + | chr4.4:86285583-86285602 | MS.gene052795:CDS | 40.0% | |
| TTGCTGTGTAATGTTCTCTG+CGG | - | chr4.4:86285693-86285712 | None:intergenic | 40.0% | |
| ! | GATGAAGTGTAGTAACGGAA+CGG | - | chr4.4:86285532-86285551 | None:intergenic | 40.0% |
| ! | GTGGGCTATAGTATTAGGAA+TGG | - | chr4.4:86285210-86285229 | None:intergenic | 40.0% |
| !! | AGTGAAGACTTTGGTGGATT+TGG | - | chr4.4:86285086-86285105 | None:intergenic | 40.0% |
| AAGAGTTGTAACCTCGTTGG+TGG | + | chr4.4:86285359-86285378 | MS.gene052795:CDS | 45.0% | |
| AGGAGAAGTGAAGACTTTGG+TGG | - | chr4.4:86285092-86285111 | None:intergenic | 45.0% | |
| AGGGAGGTCAACCTTATATC+TGG | + | chr4.4:86285404-86285423 | MS.gene052795:CDS | 45.0% | |
| GGAGGGATGAAGTGTAGTAA+CGG | - | chr4.4:86285537-86285556 | None:intergenic | 45.0% | |
| TGGAGGAGAAGTGAAGACTT+TGG | - | chr4.4:86285095-86285114 | None:intergenic | 45.0% | |
| !! | GAAGACTTTGGTGGATTTGG+AGG | - | chr4.4:86285083-86285102 | None:intergenic | 45.0% |
| !! | TAGGAATGGTGTTGGTGACA+GGG | - | chr4.4:86285196-86285215 | None:intergenic | 45.0% |
| !! | TTAGGAATGGTGTTGGTGAC+AGG | - | chr4.4:86285197-86285216 | None:intergenic | 45.0% |
| ACACTTCATCCCTCCACAGA+GGG | + | chr4.4:86285542-86285561 | MS.gene052795:CDS | 50.0% | |
| AGTCTTCACTTCTCCTCCAC+AGG | + | chr4.4:86285096-86285115 | MS.gene052795:CDS | 50.0% | |
| ATCCGACCAATTATGCTCGG+CGG | + | chr4.4:86285250-86285269 | MS.gene052795:CDS | 50.0% | |
| CGGTTTGTGCAAGTGACTGA+AGG | - | chr4.4:86285673-86285692 | None:intergenic | 50.0% | |
| GATCCTCATCGAGGATCTCA+AGG | - | chr4.4:86285457-86285476 | None:intergenic | 50.0% | |
| TACACTTCATCCCTCCACAG+AGG | + | chr4.4:86285541-86285560 | MS.gene052795:CDS | 50.0% | |
| ! | AGGCTTGTGGTTTGTCGAAG+CGG | - | chr4.4:86285325-86285344 | None:intergenic | 50.0% |
| ! | ATCGAGGATCTCAAGGCGTT+CGG | - | chr4.4:86285450-86285469 | None:intergenic | 50.0% |
| !! | GGTGACAGGGTTGATGAAGA+GGG | - | chr4.4:86285183-86285202 | None:intergenic | 50.0% |
| !! | TGGTGACAGGGTTGATGAAG+AGG | - | chr4.4:86285184-86285203 | None:intergenic | 50.0% |
| ACCAACCACCACGACCTCAA+CGG | + | chr4.4:86285146-86285165 | MS.gene052795:CDS | 55.0% | |
| ACGCCTTGAGATCCTCGATG+AGG | + | chr4.4:86285451-86285470 | MS.gene052795:CDS | 55.0% | |
| CAGCAGGGAGGCCAGATATA+AGG | - | chr4.4:86285418-86285437 | None:intergenic | 55.0% | |
| GAACAGTCACCCTCTGTGGA+GGG | - | chr4.4:86285554-86285573 | None:intergenic | 55.0% | |
| GACCGCCGAGCATAATTGGT+CGG | - | chr4.4:86285255-86285274 | None:intergenic | 55.0% | |
| GGACTCAACTATCACCGTGC+CGG | - | chr4.4:86285576-86285595 | None:intergenic | 55.0% | |
| TCCACAGAGGGTGACTGTTC+CGG | + | chr4.4:86285554-86285573 | MS.gene052795:CDS | 55.0% | |
| TGACATGGCGATCCTCATCG+AGG | - | chr4.4:86285466-86285485 | None:intergenic | 55.0% | |
| TGATGGAGGCGGTTGTCTCT+TGG | - | chr4.4:86285280-86285299 | None:intergenic | 55.0% | |
| TGGTGTGGTTGATCCTGTGG+AGG | - | chr4.4:86285112-86285131 | None:intergenic | 55.0% | |
| ! | TGATGGTCGTAGTGGTGGTG+TGG | - | chr4.4:86285127-86285146 | None:intergenic | 55.0% |
| ! | TGGTGGTGTGGTTGATCCTG+TGG | - | chr4.4:86285115-86285134 | None:intergenic | 55.0% |
| ! | TGTTTTCGCCGTTGAGGTCG+TGG | - | chr4.4:86285157-86285176 | None:intergenic | 55.0% |
| !! | GTGGTTGGTGATGGTCGTAG+TGG | - | chr4.4:86285135-86285154 | None:intergenic | 55.0% |
| !! | GTTGGTGATGGTCGTAGTGG+TGG | - | chr4.4:86285132-86285151 | None:intergenic | 55.0% |
| !! | TGTAACCTCGTTGGTGGCGA+CGG | + | chr4.4:86285365-86285384 | MS.gene052795:CDS | 55.0% |
| !!! | GGGTGTTGTTTTCGCCGTTG+AGG | - | chr4.4:86285163-86285182 | None:intergenic | 55.0% |
| ACGGTGATGTGGGCACACTC+AGG | + | chr4.4:86285384-86285403 | MS.gene052795:CDS | 60.0% | |
| AGAGGGTGACTGTTCCGGCA+CGG | + | chr4.4:86285559-86285578 | MS.gene052795:CDS | 60.0% | |
| CACTGACCAAACGGCGGTGA+TGG | - | chr4.4:86285297-86285316 | None:intergenic | 60.0% | |
| CATCACCGCCGTTTGGTCAG+TGG | + | chr4.4:86285295-86285314 | MS.gene052795:CDS | 60.0% | |
| CGGTGATGTGGGCACACTCA+GGG | + | chr4.4:86285385-86285404 | MS.gene052795:CDS | 60.0% | |
| GCGAACCACTGACCAAACGG+CGG | - | chr4.4:86285303-86285322 | None:intergenic | 60.0% | |
| GCGGCGAACCACTGACCAAA+CGG | - | chr4.4:86285306-86285325 | None:intergenic | 60.0% | |
| GGAACAGTCACCCTCTGTGG+AGG | - | chr4.4:86285555-86285574 | None:intergenic | 60.0% | |
| GGACGACCGCCGAGCATAAT+TGG | - | chr4.4:86285259-86285278 | None:intergenic | 60.0% | |
| TGATGTGGGCACACTCAGGG+AGG | + | chr4.4:86285388-86285407 | MS.gene052795:CDS | 60.0% | |
| TTTCGCCGTTGAGGTCGTGG+TGG | - | chr4.4:86285154-86285173 | None:intergenic | 60.0% | |
| ! | TGACCAAACGGCGGTGATGG+AGG | - | chr4.4:86285294-86285313 | None:intergenic | 60.0% |
| !! | GAGGTCGTGGTGGTTGGTGA+TGG | - | chr4.4:86285144-86285163 | None:intergenic | 60.0% |
| !! | GTTGGTGGCGACGGTGATGT+GGG | + | chr4.4:86285374-86285393 | MS.gene052795:CDS | 60.0% |
| CATCACCGTCGCCACCAACG+AGG | - | chr4.4:86285373-86285392 | None:intergenic | 65.0% | |
| GCCGGAACAGTCACCCTCTG+TGG | - | chr4.4:86285558-86285577 | None:intergenic | 65.0% | |
| GCCGTTGAGGTCGTGGTGGT+TGG | - | chr4.4:86285150-86285169 | None:intergenic | 65.0% | |
| !! | CCAAACGGCGGTGATGGAGG+CGG | - | chr4.4:86285291-86285310 | None:intergenic | 65.0% |
| !! | CGTTGGTGGCGACGGTGATG+TGG | + | chr4.4:86285373-86285392 | MS.gene052795:CDS | 65.0% |
| !! | GTTCGGTGCTGCGTGCAGCA+GGG | - | chr4.4:86285433-86285452 | None:intergenic | 65.0% |
| CCGCCTCCATCACCGCCGTT+TGG | + | chr4.4:86285288-86285307 | MS.gene052795:CDS | 70.0% | |
| !! | CGTTCGGTGCTGCGTGCAGC+AGG | - | chr4.4:86285434-86285453 | None:intergenic | 70.0% |
| !! | CGGTGCTGCGTGCAGCAGGG+AGG | - | chr4.4:86285430-86285449 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 86285077 | 86285733 | 86285077 | ID=MS.gene052795 |
| chr4.4 | mRNA | 86285077 | 86285733 | 86285077 | ID=MS.gene052795.t1;Parent=MS.gene052795 |
| chr4.4 | exon | 86285077 | 86285733 | 86285077 | ID=MS.gene052795.t1.exon1;Parent=MS.gene052795.t1 |
| chr4.4 | CDS | 86285077 | 86285733 | 86285077 | ID=cds.MS.gene052795.t1;Parent=MS.gene052795.t1 |
| Gene Sequence |
| Protein sequence |
