Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34144.t1 | XP_024625122.1 | 98.7 | 374 | 4 | 1 | 1 | 374 | 1 | 373 | 2.30E-203 | 718 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34144.t1 | Q9S845 | 80.3 | 346 | 65 | 2 | 30 | 372 | 25 | 370 | 1.1e-153 | 544.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34144.t1 | G7IES6 | 98.7 | 374 | 4 | 1 | 1 | 374 | 1 | 373 | 1.6e-203 | 718.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052516 | MS.gene34144 | 0.801573 | 8.45E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34144.t1 | MTR_1g100860 | 98.663 | 374 | 4 | 1 | 1 | 374 | 1 | 373 | 0.0 | 755 |
| MS.gene34144.t1 | MTR_4g018770 | 96.257 | 374 | 7 | 2 | 1 | 374 | 1 | 367 | 0.0 | 731 |
| MS.gene34144.t1 | MTR_1g100860 | 99.636 | 275 | 1 | 0 | 100 | 374 | 1 | 275 | 0.0 | 563 |
| MS.gene34144.t1 | MTR_4g018770 | 97.818 | 275 | 6 | 0 | 100 | 374 | 1 | 275 | 0.0 | 553 |
| MS.gene34144.t1 | MTR_4g113270 | 48.378 | 339 | 157 | 4 | 42 | 374 | 15 | 341 | 1.14e-101 | 304 |
| MS.gene34144.t1 | MTR_4g113270 | 51.118 | 313 | 144 | 3 | 42 | 348 | 15 | 324 | 1.43e-101 | 304 |
| MS.gene34144.t1 | MTR_3g463360 | 23.569 | 297 | 211 | 6 | 44 | 330 | 106 | 396 | 5.76e-12 | 67.0 |
| MS.gene34144.t1 | MTR_3g096310 | 23.145 | 337 | 227 | 10 | 22 | 344 | 24 | 342 | 6.25e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34144.t1 | AT1G76340 | 80.347 | 346 | 65 | 2 | 30 | 372 | 25 | 370 | 0.0 | 546 |
| MS.gene34144.t1 | AT5G19980 | 49.091 | 330 | 161 | 3 | 36 | 358 | 10 | 339 | 3.66e-101 | 303 |
| MS.gene34144.t1 | AT2G13650 | 24.333 | 300 | 213 | 5 | 46 | 336 | 39 | 333 | 2.22e-12 | 67.8 |
| MS.gene34144.t1 | AT2G13650 | 24.333 | 300 | 213 | 5 | 46 | 336 | 39 | 333 | 2.22e-12 | 67.8 |
Find 74 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGATTAATTTGGTGATA+TGG | 0.203404 | 1.2:+75151801 | MS.gene34144:CDS |
| GTTCATCAAATTTCAGTATA+TGG | 0.213733 | 1.2:+75151011 | MS.gene34144:CDS |
| CATGTGGGCGGTGGCGTATT+TGG | 0.213873 | 1.2:+75151463 | MS.gene34144:CDS |
| TCCCCTACAGCAACGAAAAT+TGG | 0.244454 | 1.2:-75151323 | None:intergenic |
| GGTCTGGCGATCTCTTTCTT+TGG | 0.299461 | 1.2:+75151707 | MS.gene34144:CDS |
| TGCTGTCAATTATCAACAAA+TGG | 0.310945 | 1.2:+75151066 | MS.gene34144:CDS |
| TCCGCTGGAATTGTTGATAA+TGG | 0.331742 | 1.2:+75151592 | MS.gene34144:CDS |
| CGCAGGGCTATTTCTGCAAC+TGG | 0.345581 | 1.2:+75151740 | MS.gene34144:CDS |
| GTGGCGTTGTCGTGCTTGTT+TGG | 0.347148 | 1.2:+75151686 | MS.gene34144:CDS |
| GTTGACGGTTATGATTAATT+TGG | 0.350016 | 1.2:+75151793 | MS.gene34144:CDS |
| TATGATTAATTTGGTGATAT+GGG | 0.359061 | 1.2:+75151802 | MS.gene34144:CDS |
| GCAACTGGATTTACTGTTCT+CGG | 0.370937 | 1.2:+75151755 | MS.gene34144:CDS |
| CCGCTGGAATTGTTGATAAT+GGG | 0.392791 | 1.2:+75151593 | MS.gene34144:CDS |
| AAATTCTTCACGTTACTAGT+AGG | 0.398839 | 1.2:-75150933 | None:intergenic |
| AATGAGAATGATGGTGTTGC+TGG | 0.408683 | 1.2:+75150969 | MS.gene34144:CDS |
| TTTGAAGACGTGGGCTTCGT+TGG | 0.410068 | 1.2:+75151376 | MS.gene34144:CDS |
| TTGAAGACGTGGGCTTCGTT+GGG | 0.412050 | 1.2:+75151377 | MS.gene34144:CDS |
| TAAACCGAAGGCTGCGATAC+AGG | 0.412609 | 1.2:+75151904 | MS.gene34144:CDS |
| GTTTCCTGTATCGCAGCCTT+CGG | 0.449049 | 1.2:-75151908 | None:intergenic |
| GCTGTCAATTATCAACAAAT+GGG | 0.454438 | 1.2:+75151067 | MS.gene34144:CDS |
| ATGATGGTGTTGCTGGAAAC+TGG | 0.466449 | 1.2:+75150976 | MS.gene34144:CDS |
| CAACGATTGAATTGAACACT+TGG | 0.468132 | 1.2:+75151528 | MS.gene34144:CDS |
| AATTTCAGTATCACTAATGT+TGG | 0.470014 | 1.2:-75151987 | None:intergenic |
| GTTGTCGTGCTTGTTTGGTC+TGG | 0.470531 | 1.2:+75151691 | MS.gene34144:CDS |
| ATACTGAAATTAATAAATCA+AGG | 0.471333 | 1.2:+75151999 | MS.gene34144:CDS |
| AATTCTTCACGTTACTAGTA+GGG | 0.474774 | 1.2:-75150932 | None:intergenic |
| CACTGTTGGTAAACAGTGAC+AGG | 0.483050 | 1.2:-75151247 | None:intergenic |
| TACTTTCATTGTGTTCCGAT+CGG | 0.492664 | 1.2:+75151295 | MS.gene34144:CDS |
| TCAGTATATGGTGTTGCTGC+TGG | 0.493201 | 1.2:+75151023 | MS.gene34144:CDS |
| AACGCCACAGGCAAAACCAC+AGG | 0.500816 | 1.2:-75151671 | None:intergenic |
| AACAAGCACGACAACGCCAC+AGG | 0.501250 | 1.2:-75151683 | None:intergenic |
| TGCGGCTTACATGTGGGCGG+TGG | 0.503669 | 1.2:+75151454 | MS.gene34144:CDS |
| TGTAACGCGGTAAGCGCACC+CGG | 0.509471 | 1.2:-75151110 | None:intergenic |
| CAGTGTTTCTGCATCGGCCG+TGG | 0.509990 | 1.2:+75151348 | MS.gene34144:CDS |
| TTTGATTTGTATGCTAGGTG+GGG | 0.511236 | 1.2:+75151859 | MS.gene34144:CDS |
| TCGTTGGGAACTATATTCGC+TGG | 0.512357 | 1.2:+75151392 | MS.gene34144:CDS |
| TGTCATGAAATTTCCTTACC+CGG | 0.516107 | 1.2:+75151091 | MS.gene34144:CDS |
| TATAGTGAATAAGTTGTTGA+CGG | 0.516373 | 1.2:+75151778 | MS.gene34144:CDS |
| AACGATTGAATTGAACACTT+GGG | 0.519198 | 1.2:+75151529 | MS.gene34144:CDS |
| TAGCAAAACTCCGGCAGCAC+TGG | 0.521554 | 1.2:-75151141 | None:intergenic |
| CAGTACTTCACCAGTGCTGC+CGG | 0.521678 | 1.2:+75151131 | MS.gene34144:CDS |
| CGTGGCCGTCTTTGAAGACG+TGG | 0.524674 | 1.2:+75151366 | MS.gene34144:CDS |
| GCGGTAAGCGCACCCGGGTA+AGG | 0.528937 | 1.2:-75151104 | None:intergenic |
| TCGACGTGGGTGGGTACAGT+GGG | 0.543028 | 1.2:+75151833 | MS.gene34144:CDS |
| TTTGCTATGTGGATGGCTCA+AGG | 0.548441 | 1.2:+75151157 | MS.gene34144:CDS |
| AGATCACTGATGAGTCTGAT+TGG | 0.551515 | 1.2:+75151639 | MS.gene34144:CDS |
| CGAAAATTGGAACAGCCGAT+CGG | 0.559850 | 1.2:-75151310 | None:intergenic |
| GGGAGTCAGTGTTTCTGCAT+CGG | 0.560622 | 1.2:+75151342 | MS.gene34144:CDS |
| CTCGACGTGGGTGGGTACAG+TGG | 0.569198 | 1.2:+75151832 | MS.gene34144:CDS |
| GTCATGAAATTTCCTTACCC+GGG | 0.580675 | 1.2:+75151092 | MS.gene34144:CDS |
| TGTGTTGTACAATAATATTG+AGG | 0.586598 | 1.2:+75151556 | MS.gene34144:CDS |
| GAAATTAATAAATCAAGGGA+AGG | 0.592364 | 1.2:+75152004 | MS.gene34144:CDS |
| ACGATTGAATTGAACACTTG+GGG | 0.594882 | 1.2:+75151530 | MS.gene34144:CDS |
| GAAGCCCACGTCTTCAAAGA+CGG | 0.608352 | 1.2:-75151371 | None:intergenic |
| ATGAATGTGAATGAGAATGA+TGG | 0.610284 | 1.2:+75150960 | MS.gene34144:CDS |
| CACGTCTTCAAAGACGGCCA+CGG | 0.612914 | 1.2:-75151365 | None:intergenic |
| GGATAAGCACTCGACGTGGG+TGG | 0.617289 | 1.2:+75151823 | MS.gene34144:CDS |
| GATAAGCACTCGACGTGGGT+GGG | 0.619780 | 1.2:+75151824 | MS.gene34144:CDS |
| GGAAACTACACAAGAAGATG+AGG | 0.619840 | 1.2:+75151925 | MS.gene34144:CDS |
| CCATCCACATAGCAAAACTC+CGG | 0.620293 | 1.2:-75151150 | None:intergenic |
| TACTGAAATTAATAAATCAA+GGG | 0.623472 | 1.2:+75152000 | MS.gene34144:CDS |
| CACAATGAAAGTATCTACGT+TGG | 0.624331 | 1.2:-75151285 | None:intergenic |
| GTGGCCGTCTTTGAAGACGT+GGG | 0.627250 | 1.2:+75151367 | MS.gene34144:CDS |
| TGATTGGCATTCATTCCCTG+TGG | 0.634911 | 1.2:+75151655 | MS.gene34144:CDS |
| ATGTAACAGTAACTCACTGT+TGG | 0.640519 | 1.2:-75151261 | None:intergenic |
| GCAATCAACAAGTAAACCGA+AGG | 0.642301 | 1.2:+75151892 | MS.gene34144:CDS |
| ACGCCACAGGCAAAACCACA+GGG | 0.653659 | 1.2:-75151670 | None:intergenic |
| CCCATTATCAACAATTCCAG+CGG | 0.654894 | 1.2:-75151593 | None:intergenic |
| TTGATTTGATGACAATGTGG+AGG | 0.666318 | 1.2:+75151198 | MS.gene34144:CDS |
| ATGGGATAAGCACTCGACGT+GGG | 0.666646 | 1.2:+75151820 | MS.gene34144:CDS |
| TATGGGATAAGCACTCGACG+TGG | 0.700984 | 1.2:+75151819 | MS.gene34144:CDS |
| AGCTTGATTTGATGACAATG+TGG | 0.707635 | 1.2:+75151195 | MS.gene34144:CDS |
| GTAACGCGGTAAGCGCACCC+GGG | 0.720177 | 1.2:-75151109 | None:intergenic |
| ACTGGTGAAGTACTGTAACG+CGG | 0.793914 | 1.2:-75151123 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTGAAATTAATAAATCA+AGG | + | chr1.2:75151999-75152018 | MS.gene34144:CDS | 15.0% |
| !! | TACTGAAATTAATAAATCAA+GGG | + | chr1.2:75152000-75152019 | MS.gene34144:CDS | 15.0% |
| !!! | TATGATTAATTTGGTGATAT+GGG | + | chr1.2:75151802-75151821 | MS.gene34144:CDS | 20.0% |
| !!! | TTATGATTAATTTGGTGATA+TGG | + | chr1.2:75151801-75151820 | MS.gene34144:CDS | 20.0% |
| ! | AATTTCAGTATCACTAATGT+TGG | - | chr1.2:75151990-75152009 | None:intergenic | 25.0% |
| ! | GAAATTAATAAATCAAGGGA+AGG | + | chr1.2:75152004-75152023 | MS.gene34144:CDS | 25.0% |
| ! | GTTCATCAAATTTCAGTATA+TGG | + | chr1.2:75151011-75151030 | MS.gene34144:CDS | 25.0% |
| ! | TATAGTGAATAAGTTGTTGA+CGG | + | chr1.2:75151778-75151797 | MS.gene34144:CDS | 25.0% |
| ! | TGTGTTGTACAATAATATTG+AGG | + | chr1.2:75151556-75151575 | MS.gene34144:CDS | 25.0% |
| !!! | TGATTATCAGTTTACTTTTG+CGG | + | chr1.2:75151436-75151455 | MS.gene34144:CDS | 25.0% |
| !!! | TTTTGTTTACATAAAGCATG+TGG | + | chr1.2:75151502-75151521 | MS.gene34144:CDS | 25.0% |
| AAATTCTTCACGTTACTAGT+AGG | - | chr1.2:75150936-75150955 | None:intergenic | 30.0% | |
| AACGATTGAATTGAACACTT+GGG | + | chr1.2:75151529-75151548 | MS.gene34144:CDS | 30.0% | |
| AATTCTTCACGTTACTAGTA+GGG | - | chr1.2:75150935-75150954 | None:intergenic | 30.0% | |
| ATGAATGTGAATGAGAATGA+TGG | + | chr1.2:75150960-75150979 | MS.gene34144:CDS | 30.0% | |
| GCTGTCAATTATCAACAAAT+GGG | + | chr1.2:75151067-75151086 | MS.gene34144:CDS | 30.0% | |
| GTTGACGGTTATGATTAATT+TGG | + | chr1.2:75151793-75151812 | MS.gene34144:CDS | 30.0% | |
| TGCTGTCAATTATCAACAAA+TGG | + | chr1.2:75151066-75151085 | MS.gene34144:CDS | 30.0% | |
| !!! | TTTTGATTTGTATGCTAGGT+GGG | + | chr1.2:75151858-75151877 | MS.gene34144:CDS | 30.0% |
| ACGATTGAATTGAACACTTG+GGG | + | chr1.2:75151530-75151549 | MS.gene34144:CDS | 35.0% | |
| ATGTAACAGTAACTCACTGT+TGG | - | chr1.2:75151264-75151283 | None:intergenic | 35.0% | |
| CAACGATTGAATTGAACACT+TGG | + | chr1.2:75151528-75151547 | MS.gene34144:CDS | 35.0% | |
| TACTTTCATTGTGTTCCGAT+CGG | + | chr1.2:75151295-75151314 | MS.gene34144:CDS | 35.0% | |
| TGTCATGAAATTTCCTTACC+CGG | + | chr1.2:75151091-75151110 | MS.gene34144:CDS | 35.0% | |
| ! | AGCTTGATTTGATGACAATG+TGG | + | chr1.2:75151195-75151214 | MS.gene34144:CDS | 35.0% |
| ! | TTCCAATTTTCGTTGCTGTA+GGG | + | chr1.2:75151321-75151340 | MS.gene34144:CDS | 35.0% |
| ! | TTGATTTGATGACAATGTGG+AGG | + | chr1.2:75151198-75151217 | MS.gene34144:CDS | 35.0% |
| !! | CACAATGAAAGTATCTACGT+TGG | - | chr1.2:75151288-75151307 | None:intergenic | 35.0% |
| !! | TTTGATTTGTATGCTAGGTG+GGG | + | chr1.2:75151859-75151878 | MS.gene34144:CDS | 35.0% |
| !!! | CTTTTGATTTGTATGCTAGG+TGG | + | chr1.2:75151857-75151876 | MS.gene34144:CDS | 35.0% |
| !!! | GGACTTTTGATTTGTATGCT+AGG | + | chr1.2:75151854-75151873 | MS.gene34144:CDS | 35.0% |
| AGATCACTGATGAGTCTGAT+TGG | + | chr1.2:75151639-75151658 | MS.gene34144:CDS | 40.0% | |
| AGGTAAAAAATCACAGCAGC+CGG | - | chr1.2:75151230-75151249 | None:intergenic | 40.0% | |
| CCCATTATCAACAATTCCAG+CGG | - | chr1.2:75151596-75151615 | None:intergenic | 40.0% | |
| GCAACTGGATTTACTGTTCT+CGG | + | chr1.2:75151755-75151774 | MS.gene34144:CDS | 40.0% | |
| GCAATCAACAAGTAAACCGA+AGG | + | chr1.2:75151892-75151911 | MS.gene34144:CDS | 40.0% | |
| GGAAACTACACAAGAAGATG+AGG | + | chr1.2:75151925-75151944 | MS.gene34144:CDS | 40.0% | |
| GTCATGAAATTTCCTTACCC+GGG | + | chr1.2:75151092-75151111 | MS.gene34144:CDS | 40.0% | |
| ! | GTTCCAATTTTCGTTGCTGT+AGG | + | chr1.2:75151320-75151339 | MS.gene34144:CDS | 40.0% |
| ! | TACTTTTGCGGCTTACATGT+GGG | + | chr1.2:75151448-75151467 | MS.gene34144:CDS | 40.0% |
| ! | TCCAATTTTCGTTGCTGTAG+GGG | + | chr1.2:75151322-75151341 | MS.gene34144:CDS | 40.0% |
| ! | TCCGCTGGAATTGTTGATAA+TGG | + | chr1.2:75151592-75151611 | MS.gene34144:CDS | 40.0% |
| !! | AATGAGAATGATGGTGTTGC+TGG | + | chr1.2:75150969-75150988 | MS.gene34144:CDS | 40.0% |
| !! | CCGCTGGAATTGTTGATAAT+GGG | + | chr1.2:75151593-75151612 | MS.gene34144:CDS | 40.0% |
| !! | TTACTTTTGCGGCTTACATG+TGG | + | chr1.2:75151447-75151466 | MS.gene34144:CDS | 40.0% |
| CCATCCACATAGCAAAACTC+CGG | - | chr1.2:75151153-75151172 | None:intergenic | 45.0% | |
| CGAAAATTGGAACAGCCGAT+CGG | - | chr1.2:75151313-75151332 | None:intergenic | 45.0% | |
| TCCCCTACAGCAACGAAAAT+TGG | - | chr1.2:75151326-75151345 | None:intergenic | 45.0% | |
| TCGTTGGGAACTATATTCGC+TGG | + | chr1.2:75151392-75151411 | MS.gene34144:CDS | 45.0% | |
| TGATTGGCATTCATTCCCTG+TGG | + | chr1.2:75151655-75151674 | MS.gene34144:CDS | 45.0% | |
| ! | CACTGTTGGTAAACAGTGAC+AGG | - | chr1.2:75151250-75151269 | None:intergenic | 45.0% |
| ! | CTTTGGATTTTCGTGTCGCA+GGG | + | chr1.2:75151724-75151743 | MS.gene34144:CDS | 45.0% |
| ! | GACAATGTGGAGGTTTTTGC+CGG | + | chr1.2:75151208-75151227 | MS.gene34144:CDS | 45.0% |
| ! | TCTTTGGATTTTCGTGTCGC+AGG | + | chr1.2:75151723-75151742 | MS.gene34144:CDS | 45.0% |
| ! | TTTGCTATGTGGATGGCTCA+AGG | + | chr1.2:75151157-75151176 | MS.gene34144:CDS | 45.0% |
| !! | ACTGGTGAAGTACTGTAACG+CGG | - | chr1.2:75151126-75151145 | None:intergenic | 45.0% |
| !! | ATGATGGTGTTGCTGGAAAC+TGG | + | chr1.2:75150976-75150995 | MS.gene34144:CDS | 45.0% |
| !! | TCAGTATATGGTGTTGCTGC+TGG | + | chr1.2:75151023-75151042 | MS.gene34144:CDS | 45.0% |
| ATGGGATAAGCACTCGACGT+GGG | + | chr1.2:75151820-75151839 | MS.gene34144:CDS | 50.0% | |
| GAAGCCCACGTCTTCAAAGA+CGG | - | chr1.2:75151374-75151393 | None:intergenic | 50.0% | |
| GGTCTGGCGATCTCTTTCTT+TGG | + | chr1.2:75151707-75151726 | MS.gene34144:CDS | 50.0% | |
| GTTGTCGTGCTTGTTTGGTC+TGG | + | chr1.2:75151691-75151710 | MS.gene34144:CDS | 50.0% | |
| GTTTCCTGTATCGCAGCCTT+CGG | - | chr1.2:75151911-75151930 | None:intergenic | 50.0% | |
| TAAACCGAAGGCTGCGATAC+AGG | + | chr1.2:75151904-75151923 | MS.gene34144:CDS | 50.0% | |
| TATGGGATAAGCACTCGACG+TGG | + | chr1.2:75151819-75151838 | MS.gene34144:CDS | 50.0% | |
| TTGAAGACGTGGGCTTCGTT+GGG | + | chr1.2:75151377-75151396 | MS.gene34144:CDS | 50.0% | |
| TTTGAAGACGTGGGCTTCGT+TGG | + | chr1.2:75151376-75151395 | MS.gene34144:CDS | 50.0% | |
| ! | GGGAGTCAGTGTTTCTGCAT+CGG | + | chr1.2:75151342-75151361 | MS.gene34144:CDS | 50.0% |
| ! | TTTTGCGGCTTACATGTGGG+CGG | + | chr1.2:75151451-75151470 | MS.gene34144:CDS | 50.0% |
| !! | ATTCCCTGTGGTTTTGCCTG+TGG | + | chr1.2:75151667-75151686 | MS.gene34144:CDS | 50.0% |
| !! | CCGGAGTTTTGCTATGTGGA+TGG | + | chr1.2:75151150-75151169 | MS.gene34144:CDS | 50.0% |
| AACAAGCACGACAACGCCAC+AGG | - | chr1.2:75151686-75151705 | None:intergenic | 55.0% | |
| AACGCCACAGGCAAAACCAC+AGG | - | chr1.2:75151674-75151693 | None:intergenic | 55.0% | |
| ACGCCACAGGCAAAACCACA+GGG | - | chr1.2:75151673-75151692 | None:intergenic | 55.0% | |
| CACGTCTTCAAAGACGGCCA+CGG | - | chr1.2:75151368-75151387 | None:intergenic | 55.0% | |
| CAGTACTTCACCAGTGCTGC+CGG | + | chr1.2:75151131-75151150 | MS.gene34144:CDS | 55.0% | |
| GATAAGCACTCGACGTGGGT+GGG | + | chr1.2:75151824-75151843 | MS.gene34144:CDS | 55.0% | |
| GTGGCGTTGTCGTGCTTGTT+TGG | + | chr1.2:75151686-75151705 | MS.gene34144:CDS | 55.0% | |
| TAGCAAAACTCCGGCAGCAC+TGG | - | chr1.2:75151144-75151163 | None:intergenic | 55.0% | |
| ! | GTGGCCGTCTTTGAAGACGT+GGG | + | chr1.2:75151367-75151386 | MS.gene34144:CDS | 55.0% |
| !! | CGCAGGGCTATTTCTGCAAC+TGG | + | chr1.2:75151740-75151759 | MS.gene34144:CDS | 55.0% |
| !! | GCTGCCGGAGTTTTGCTATG+TGG | + | chr1.2:75151146-75151165 | MS.gene34144:CDS | 55.0% |
| !!! | GGCTCTTCTGCTTTTTCCGC+TGG | + | chr1.2:75151577-75151596 | MS.gene34144:CDS | 55.0% |
| CATGTGGGCGGTGGCGTATT+TGG | + | chr1.2:75151463-75151482 | MS.gene34144:CDS | 60.0% | |
| GGATAAGCACTCGACGTGGG+TGG | + | chr1.2:75151823-75151842 | MS.gene34144:CDS | 60.0% | |
| TCGACGTGGGTGGGTACAGT+GGG | + | chr1.2:75151833-75151852 | MS.gene34144:CDS | 60.0% | |
| TGTAACGCGGTAAGCGCACC+CGG | - | chr1.2:75151113-75151132 | None:intergenic | 60.0% | |
| ! | CAGTGTTTCTGCATCGGCCG+TGG | + | chr1.2:75151348-75151367 | MS.gene34144:CDS | 60.0% |
| ! | CGTGGCCGTCTTTGAAGACG+TGG | + | chr1.2:75151366-75151385 | MS.gene34144:CDS | 60.0% |
| CTCGACGTGGGTGGGTACAG+TGG | + | chr1.2:75151832-75151851 | MS.gene34144:CDS | 65.0% | |
| GTAACGCGGTAAGCGCACCC+GGG | - | chr1.2:75151112-75151131 | None:intergenic | 65.0% | |
| TGCGGCTTACATGTGGGCGG+TGG | + | chr1.2:75151454-75151473 | MS.gene34144:CDS | 65.0% | |
| GCGGTAAGCGCACCCGGGTA+AGG | - | chr1.2:75151107-75151126 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 75150909 | 75152033 | 75150909 | ID=MS.gene34144 |
| chr1.2 | mRNA | 75150909 | 75152033 | 75150909 | ID=MS.gene34144.t1;Parent=MS.gene34144 |
| chr1.2 | exon | 75150909 | 75152033 | 75150909 | ID=MS.gene34144.t1.exon1;Parent=MS.gene34144.t1 |
| chr1.2 | CDS | 75150909 | 75152033 | 75150909 | ID=cds.MS.gene34144.t1;Parent=MS.gene34144.t1 |
| Gene Sequence |
| Protein sequence |
