AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052516


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052516.t1 MTR_4g089070 99.728 367 1 0 1 367 289 655 0.0 760
MS.gene052516.t1 MTR_7g099060 73.913 368 89 2 1 367 263 624 0.0 545
MS.gene052516.t1 MTR_4g032885 55.014 369 150 4 2 367 292 647 6.52e-140 412
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052516.t1 AT1G61040 67.391 368 113 3 1 367 282 643 2.09e-168 485
MS.gene052516.t1 AT1G61040 67.391 368 113 3 1 367 282 643 2.09e-168 485
MS.gene052516.t1 AT1G61040 67.391 368 113 3 1 367 282 643 2.09e-168 485

Find 95 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTCCACCTTCTTGAAAA+TGG 0.242437 4.3:+23607366 None:intergenic
AGGAGCTCAGGCAGGATTTA+TGG 0.245228 4.3:-23607064 MS.gene052516:CDS
GTCCAACACATCCTGCTTGC+TGG 0.246370 4.3:+23607737 None:intergenic
ACAAGTATTTGAATGTTGTT+TGG 0.305232 4.3:-23607875 MS.gene052516:CDS
TTAGCATTACTTCATAAGTA+TGG 0.312059 4.3:-23607096 MS.gene052516:CDS
GTCCTTCACCTTTGCATGTC+TGG 0.313091 4.3:+23607503 None:intergenic
CAAGTATTTGAATGTTGTTT+GGG 0.325352 4.3:-23607874 MS.gene052516:CDS
TTCAGCCAGCTTCAGAGCTT+TGG 0.335439 4.3:+23607479 None:intergenic
GGAATATAAGCAGTGGGTTA+AGG 0.335444 4.3:-23607787 MS.gene052516:CDS
TGAAGTAATGCTAATGAAAC+TGG 0.345518 4.3:+23607105 None:intergenic
GGATCGATTAAGGAGCGATT+TGG 0.360135 4.3:-23607598 MS.gene052516:CDS
TAAATCCTGCCTGAGCTCCT+TGG 0.376568 4.3:+23607067 None:intergenic
TTGGAAGCTGCTGCTGATGC+TGG 0.377240 4.3:-23607198 MS.gene052516:CDS
GCGCCAGACTCTGCAGTTAC+TGG 0.378663 4.3:+23607240 None:intergenic
AAATCCTGCCTGAGCTCCTT+GGG 0.381424 4.3:+23607068 None:intergenic
TCTAGTTTATACTGTCGATC+AGG 0.382459 4.3:+23607912 None:intergenic
TCCAACACATCCTGCTTGCT+GGG 0.387672 4.3:+23607738 None:intergenic
GGCAAGACTGCTAGAATTAG+AGG 0.388259 4.3:-23607529 MS.gene052516:CDS
GATGCAGGCGCCAACGGAAC+TGG 0.389784 4.3:-23607267 MS.gene052516:CDS
CTGCTGAGAAGGATCGATTA+AGG 0.390215 4.3:-23607608 MS.gene052516:CDS
CATCCTGCTTGCTGGGCATC+CGG 0.425090 4.3:+23607745 None:intergenic
GTTGGTTGCTTTGTAAGAGT+TGG 0.430881 4.3:-23608002 MS.gene052516:CDS
TTCTTCGAGGAGTTGATAGT+TGG 0.436708 4.3:-23608020 MS.gene052516:CDS
TGGTGGAGCCCAAGGAGCTC+AGG 0.441296 4.3:-23607076 MS.gene052516:CDS
CTCTGCTGCGAGGTGGCAAA+TGG 0.444979 4.3:-23607841 MS.gene052516:CDS
CAAGAAGGTGGACAAGATCA+AGG 0.452160 4.3:-23607359 MS.gene052516:CDS
GTACCAGTAACTGCAGAGTC+TGG 0.460446 4.3:-23607243 MS.gene052516:CDS
GGAATCGGTAGATCTAAAAC+TGG 0.468450 4.3:-23607981 MS.gene052516:CDS
GTTGGCTTAGTTTCTGATGC+AGG 0.468889 4.3:-23607282 MS.gene052516:CDS
GCTTTAAATAATAATACAGT+TGG 0.476435 4.3:-23607300 MS.gene052516:CDS
CCATTAACCGGTTTAAAAGA+AGG 0.478030 4.3:-23607405 MS.gene052516:CDS
TCTGAATTGAGGCCATTAAC+CGG 0.478837 4.3:-23607417 MS.gene052516:CDS
TTCTCAGCAGCAATATTTAG+CGG 0.479881 4.3:+23607621 None:intergenic
ACGAGTGCTCCGGTGGATCA+AGG 0.488751 4.3:-23607162 MS.gene052516:CDS
GGTTTAAAAGAAGGGGATGC+AGG 0.489652 4.3:-23607396 MS.gene052516:CDS
GGTGGCTACTGCCATTGCCT+TGG 0.489865 4.3:-23607217 MS.gene052516:CDS
TGCTGCTGATGCTGGAAAGT+TGG 0.493452 4.3:-23607190 MS.gene052516:CDS
TAAGCAGTGGGTTAAGGAAG+TGG 0.495237 4.3:-23607781 MS.gene052516:CDS
GTTTATGGAGCCTTTCTTCG+AGG 0.503115 4.3:-23608033 None:intergenic
TGGCCGGATGCCCAGCAAGC+AGG 0.503690 4.3:-23607748 MS.gene052516:CDS
GCCCAGCAAGCAGGATGTGT+TGG 0.504729 4.3:-23607739 MS.gene052516:CDS
CATTAACCGGTTTAAAAGAA+GGG 0.511793 4.3:-23607404 MS.gene052516:CDS
AAGTGGAACGGAGTGGTGGC+CGG 0.511876 4.3:-23607764 MS.gene052516:CDS
GCTAAATATTGCTGCTGAGA+AGG 0.511981 4.3:-23607619 MS.gene052516:CDS
ACTATCAACTCCTCGAAGAA+AGG 0.513788 4.3:+23608023 None:intergenic
TGTTGCAACACCTAGTGAAA+AGG 0.522228 4.3:-23607328 MS.gene052516:CDS
TTTAAACTCTCGGAAAATGA+TGG 0.524376 4.3:-23607009 MS.gene052516:CDS
TAAGAACGATGATGTGGAAG+TGG 0.526485 4.3:-23607562 MS.gene052516:CDS
TGCTTATATTCCTCTTCAAG+TGG 0.530910 4.3:+23607798 None:intergenic
CGACTCTCCTCCACTTGAAG+AGG 0.532180 4.3:-23607808 MS.gene052516:CDS
GGACGCCAAAGCTCTGAAGC+TGG 0.533086 4.3:-23607484 MS.gene052516:CDS
AACAGTTGGATTTAAACTCT+CGG 0.535156 4.3:-23607019 MS.gene052516:CDS
ACCATGCAGAGCCGATAGAT+AGG 0.535837 4.3:+23607957 None:intergenic
TACTGGTACTCCAGTTCCGT+TGG 0.535943 4.3:+23607257 None:intergenic
AACTCTCGGAAAATGATGGC+AGG 0.539618 4.3:-23607005 MS.gene052516:CDS
GGAGCCCAAGGAGCTCAGGC+AGG 0.540666 4.3:-23607072 MS.gene052516:CDS
TGCTTTGTAAGAGTTGGAAT+CGG 0.542888 4.3:-23607996 MS.gene052516:CDS
GTTTCTGATGCAGGCGCCAA+CGG 0.547991 4.3:-23607273 MS.gene052516:CDS
CTAGTTTATACTGTCGATCA+GGG 0.549414 4.3:+23607913 None:intergenic
AGCAGCAACAAATTCAAAGA+AGG 0.550571 4.3:+23606935 None:intergenic
TTGAAGAGGAATATAAGCAG+TGG 0.551720 4.3:-23607794 MS.gene052516:CDS
GATTCCGTCCCTTGATCCAC+CGG 0.555339 4.3:+23607153 None:intergenic
AGCATCAGCAGCAGCTTCCA+AGG 0.560846 4.3:+23607200 None:intergenic
CGAGTGCTCCGGTGGATCAA+GGG 0.561052 4.3:-23607161 MS.gene052516:CDS
CATAAGTATGGTGGAGCCCA+AGG 0.561256 4.3:-23607084 MS.gene052516:CDS
GGTGATTACAAAAGAAGAAG+AGG 0.564617 4.3:-23606958 MS.gene052516:CDS
AGCAGCAGCTTCCAAGGCAA+TGG 0.566339 4.3:+23607206 None:intergenic
ACCTATCTATCGGCTCTGCA+TGG 0.568699 4.3:-23607958 MS.gene052516:CDS
GTTGGTGGATACGAGTGCTC+CGG 0.569612 4.3:-23607172 MS.gene052516:CDS
CTAAAACTGGACCTATCTAT+CGG 0.572540 4.3:-23607968 MS.gene052516:CDS
CAAAGAATAGAATCAACAGT+TGG 0.573933 4.3:-23607033 MS.gene052516:CDS
TGCTGATGCTGGAAAGTTGG+TGG 0.573970 4.3:-23607187 MS.gene052516:CDS
TGTGGAAGTGGAGAGGATCA+AGG 0.577964 4.3:-23607550 MS.gene052516:CDS
GCATTACTTCATAAGTATGG+TGG 0.585022 4.3:-23607093 MS.gene052516:CDS
GGTGGATACGAGTGCTCCGG+TGG 0.588884 4.3:-23607169 MS.gene052516:CDS
ATCCAGACATGCAAAGGTGA+AGG 0.594199 4.3:-23607505 MS.gene052516:CDS
ATTAACCGGTTTAAAAGAAG+GGG 0.598511 4.3:-23607403 MS.gene052516:CDS
AATATTTAGCGGCCTTGACG+AGG 0.600006 4.3:+23607632 None:intergenic
AGAGGCATCCAGACATGCAA+AGG 0.600916 4.3:-23607511 MS.gene052516:CDS
AAGTATTTGAATGTTGTTTG+GGG 0.602265 4.3:-23607873 MS.gene052516:CDS
TTATATTCCTCTTCAAGTGG+AGG 0.604750 4.3:+23607801 None:intergenic
AACTGCAGAGTCTGGCGCGG+TGG 0.610976 4.3:-23607235 MS.gene052516:CDS
TGAAGAGGAATATAAGCAGT+GGG 0.622796 4.3:-23607793 MS.gene052516:CDS
TGCTCCGGTGGATCAAGGGA+CGG 0.626963 4.3:-23607157 MS.gene052516:CDS
ATACTGTCGATCAGGGTCTG+AGG 0.628006 4.3:+23607920 None:intergenic
CATGTATTGACTCTGTCAGT+TGG 0.631980 4.3:-23606979 MS.gene052516:CDS
ACGATGATGTGGAAGTGGAG+AGG 0.638337 4.3:-23607557 MS.gene052516:CDS
GTTAAGGAAGTGGAACGGAG+TGG 0.638804 4.3:-23607771 MS.gene052516:CDS
AAGGAAGTGGAACGGAGTGG+TGG 0.642363 4.3:-23607768 MS.gene052516:CDS
ATGAAAGCTCTGCTGCGAGG+TGG 0.660569 4.3:-23607848 MS.gene052516:CDS
AGCGATTTGGAAAGAGCACA+AGG 0.666283 4.3:-23607585 MS.gene052516:CDS
ACAAGGTAAGAACGATGATG+TGG 0.678810 4.3:-23607568 MS.gene052516:CDS
AGTGGGTTAAGGAAGTGGAA+CGG 0.697326 4.3:-23607776 MS.gene052516:CDS
AGTAACTGCAGAGTCTGGCG+CGG 0.702682 4.3:-23607238 MS.gene052516:CDS
GAAATGAAAGCTCTGCTGCG+AGG 0.724498 4.3:-23607851 MS.gene052516:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GCTTTAAATAATAATACAGT+TGG - chr4.3:23607677-23607696 MS.gene052516:CDS 20.0%
! ACAAGTATTTGAATGTTGTT+TGG - chr4.3:23607102-23607121 MS.gene052516:CDS 25.0%
! TGAAATGAACAGAAAAAACA+GGG - chr4.3:23607517-23607536 MS.gene052516:CDS 25.0%
! TTAGCATTACTTCATAAGTA+TGG - chr4.3:23607881-23607900 MS.gene052516:CDS 25.0%
!! AAGTATTTGAATGTTGTTTG+GGG - chr4.3:23607104-23607123 MS.gene052516:CDS 25.0%
!! CAAGTATTTGAATGTTGTTT+GGG - chr4.3:23607103-23607122 MS.gene052516:CDS 25.0%
AACAGTTGGATTTAAACTCT+CGG - chr4.3:23607958-23607977 MS.gene052516:CDS 30.0%
CAAAGAATAGAATCAACAGT+TGG - chr4.3:23607944-23607963 MS.gene052516:CDS 30.0%
CTGAAATGAACAGAAAAAAC+AGG - chr4.3:23607516-23607535 MS.gene052516:CDS 30.0%
TCAAAAATGCTTCTGAATTG+AGG - chr4.3:23607549-23607568 MS.gene052516:CDS 30.0%
TGAAGTAATGCTAATGAAAC+TGG + chr4.3:23607875-23607894 None:intergenic 30.0%
TTTAAACTCTCGGAAAATGA+TGG - chr4.3:23607968-23607987 MS.gene052516:CDS 30.0%
! ATTAACCGGTTTAAAAGAAG+GGG - chr4.3:23607574-23607593 MS.gene052516:CDS 30.0%
! CATTAACCGGTTTAAAAGAA+GGG - chr4.3:23607573-23607592 MS.gene052516:CDS 30.0%
!! GTTATGATCCATTTTCAAGA+AGG - chr4.3:23607603-23607622 MS.gene052516:CDS 30.0%
CTAAAACTGGACCTATCTAT+CGG - chr4.3:23607009-23607028 MS.gene052516:CDS 35.0%
CTAGTTTATACTGTCGATCA+GGG + chr4.3:23607067-23607086 None:intergenic 35.0%
GCATTACTTCATAAGTATGG+TGG - chr4.3:23607884-23607903 MS.gene052516:CDS 35.0%
GGTGATTACAAAAGAAGAAG+AGG - chr4.3:23608019-23608038 MS.gene052516:CDS 35.0%
TGAAGAGGAATATAAGCAGT+GGG - chr4.3:23607184-23607203 MS.gene052516:CDS 35.0%
TGCTTATATTCCTCTTCAAG+TGG + chr4.3:23607182-23607201 None:intergenic 35.0%
TGCTTTGTAAGAGTTGGAAT+CGG - chr4.3:23606981-23607000 MS.gene052516:CDS 35.0%
TTATATTCCTCTTCAAGTGG+AGG + chr4.3:23607179-23607198 None:intergenic 35.0%
TTCTCAGCAGCAATATTTAG+CGG + chr4.3:23607359-23607378 None:intergenic 35.0%
TTGAAGAGGAATATAAGCAG+TGG - chr4.3:23607183-23607202 MS.gene052516:CDS 35.0%
! CCATTAACCGGTTTAAAAGA+AGG - chr4.3:23607572-23607591 MS.gene052516:CDS 35.0%
! CCTTCTTTTAAACCGGTTAA+TGG + chr4.3:23607575-23607594 None:intergenic 35.0%
! TCTAGTTTATACTGTCGATC+AGG + chr4.3:23607068-23607087 None:intergenic 35.0%
!! ATGATCCATTTTCAAGAAGG+TGG - chr4.3:23607606-23607625 MS.gene052516:CDS 35.0%
ACAAGGTAAGAACGATGATG+TGG - chr4.3:23607409-23607428 MS.gene052516:CDS 40.0%
ACTATCAACTCCTCGAAGAA+AGG + chr4.3:23606957-23606976 None:intergenic 40.0%
CTTGTCCACCTTCTTGAAAA+TGG + chr4.3:23607614-23607633 None:intergenic 40.0%
GCTAAATATTGCTGCTGAGA+AGG - chr4.3:23607358-23607377 MS.gene052516:CDS 40.0%
TAAGAACGATGATGTGGAAG+TGG - chr4.3:23607415-23607434 MS.gene052516:CDS 40.0%
TCTGAATTGAGGCCATTAAC+CGG - chr4.3:23607560-23607579 MS.gene052516:CDS 40.0%
TGTTGCAACACCTAGTGAAA+AGG - chr4.3:23607649-23607668 MS.gene052516:CDS 40.0%
! GGAATCGGTAGATCTAAAAC+TGG - chr4.3:23606996-23607015 MS.gene052516:CDS 40.0%
! GTTGGTTGCTTTGTAAGAGT+TGG - chr4.3:23606975-23606994 MS.gene052516:CDS 40.0%
! TGCATCCCCTTCTTTTAAAC+CGG + chr4.3:23607582-23607601 None:intergenic 40.0%
!! CATGTATTGACTCTGTCAGT+TGG - chr4.3:23607998-23608017 MS.gene052516:CDS 40.0%
!! GGAATATAAGCAGTGGGTTA+AGG - chr4.3:23607190-23607209 MS.gene052516:CDS 40.0%
!! TTCTTCGAGGAGTTGATAGT+TGG - chr4.3:23606957-23606976 MS.gene052516:CDS 40.0%
AACTCTCGGAAAATGATGGC+AGG - chr4.3:23607972-23607991 MS.gene052516:CDS 45.0%
AATATTTAGCGGCCTTGACG+AGG + chr4.3:23607348-23607367 None:intergenic 45.0%
AGAAAAAGTCTGCCTCGTCA+AGG - chr4.3:23607333-23607352 MS.gene052516:CDS 45.0%
ATCCAGACATGCAAAGGTGA+AGG - chr4.3:23607472-23607491 MS.gene052516:CDS 45.0%
CAAGAAGGTGGACAAGATCA+AGG - chr4.3:23607618-23607637 MS.gene052516:CDS 45.0%
CTGCTGAGAAGGATCGATTA+AGG - chr4.3:23607369-23607388 MS.gene052516:CDS 45.0%
GGATCGATTAAGGAGCGATT+TGG - chr4.3:23607379-23607398 MS.gene052516:CDS 45.0%
GGCAAGACTGCTAGAATTAG+AGG - chr4.3:23607448-23607467 MS.gene052516:CDS 45.0%
GGTTTAAAAGAAGGGGATGC+AGG - chr4.3:23607581-23607600 MS.gene052516:CDS 45.0%
! AAAGCAGCAGCCTTTTCACT+AGG + chr4.3:23607662-23607681 None:intergenic 45.0%
! AGCGATTTGGAAAGAGCACA+AGG - chr4.3:23607392-23607411 MS.gene052516:CDS 45.0%
! GTTGGCTTAGTTTCTGATGC+AGG - chr4.3:23607695-23607714 MS.gene052516:CDS 45.0%
!! AGTGGGTTAAGGAAGTGGAA+CGG - chr4.3:23607201-23607220 MS.gene052516:CDS 45.0%
!! TAAGCAGTGGGTTAAGGAAG+TGG - chr4.3:23607196-23607215 MS.gene052516:CDS 45.0%
AAATCCTGCCTGAGCTCCTT+GGG + chr4.3:23607912-23607931 None:intergenic 50.0%
ACCATGCAGAGCCGATAGAT+AGG + chr4.3:23607023-23607042 None:intergenic 50.0%
ACGATGATGTGGAAGTGGAG+AGG - chr4.3:23607420-23607439 MS.gene052516:CDS 50.0%
AGGAGCTCAGGCAGGATTTA+TGG - chr4.3:23607913-23607932 MS.gene052516:CDS 50.0%
ATACTGTCGATCAGGGTCTG+AGG + chr4.3:23607060-23607079 None:intergenic 50.0%
GAAATGAAAGCTCTGCTGCG+AGG - chr4.3:23607126-23607145 MS.gene052516:CDS 50.0%
GTACCAGTAACTGCAGAGTC+TGG - chr4.3:23607734-23607753 MS.gene052516:CDS 50.0%
GTCCTTCACCTTTGCATGTC+TGG + chr4.3:23607477-23607496 None:intergenic 50.0%
GTTAAGGAAGTGGAACGGAG+TGG - chr4.3:23607206-23607225 MS.gene052516:CDS 50.0%
TAAATCCTGCCTGAGCTCCT+TGG + chr4.3:23607913-23607932 None:intergenic 50.0%
TACTGGTACTCCAGTTCCGT+TGG + chr4.3:23607723-23607742 None:intergenic 50.0%
TCCAACACATCCTGCTTGCT+GGG + chr4.3:23607242-23607261 None:intergenic 50.0%
TGCTGATGCTGGAAAGTTGG+TGG - chr4.3:23607790-23607809 MS.gene052516:CDS 50.0%
TGCTGCTGATGCTGGAAAGT+TGG - chr4.3:23607787-23607806 MS.gene052516:CDS 50.0%
TGTGGAAGTGGAGAGGATCA+AGG - chr4.3:23607427-23607446 MS.gene052516:CDS 50.0%
TTCAGCCAGCTTCAGAGCTT+TGG + chr4.3:23607501-23607520 None:intergenic 50.0%
! CATAAGTATGGTGGAGCCCA+AGG - chr4.3:23607893-23607912 MS.gene052516:CDS 50.0%
!! ACCTATCTATCGGCTCTGCA+TGG - chr4.3:23607019-23607038 MS.gene052516:CDS 50.0%
!! AGAGGCATCCAGACATGCAA+AGG - chr4.3:23607466-23607485 MS.gene052516:CDS 50.0%
AAGGAAGTGGAACGGAGTGG+TGG - chr4.3:23607209-23607228 MS.gene052516:CDS 55.0%
AGCAGCAGCTTCCAAGGCAA+TGG + chr4.3:23607774-23607793 None:intergenic 55.0%
AGCATCAGCAGCAGCTTCCA+AGG + chr4.3:23607780-23607799 None:intergenic 55.0%
AGTAACTGCAGAGTCTGGCG+CGG - chr4.3:23607739-23607758 MS.gene052516:CDS 55.0%
ATGAAAGCTCTGCTGCGAGG+TGG - chr4.3:23607129-23607148 MS.gene052516:CDS 55.0%
CGACTCTCCTCCACTTGAAG+AGG - chr4.3:23607169-23607188 MS.gene052516:CDS 55.0%
GATTCCGTCCCTTGATCCAC+CGG + chr4.3:23607827-23607846 None:intergenic 55.0%
GTCCAACACATCCTGCTTGC+TGG + chr4.3:23607243-23607262 None:intergenic 55.0%
GTTTCTGATGCAGGCGCCAA+CGG - chr4.3:23607704-23607723 MS.gene052516:CDS 55.0%
TTGGAAGCTGCTGCTGATGC+TGG - chr4.3:23607779-23607798 MS.gene052516:CDS 55.0%
! GTTGGTGGATACGAGTGCTC+CGG - chr4.3:23607805-23607824 MS.gene052516:CDS 55.0%
AAGTGGAACGGAGTGGTGGC+CGG - chr4.3:23607213-23607232 MS.gene052516:CDS 60.0%
ACGAGTGCTCCGGTGGATCA+AGG - chr4.3:23607815-23607834 MS.gene052516:CDS 60.0%
CGAGTGCTCCGGTGGATCAA+GGG - chr4.3:23607816-23607835 MS.gene052516:CDS 60.0%
CTCTGCTGCGAGGTGGCAAA+TGG - chr4.3:23607136-23607155 MS.gene052516:CDS 60.0%
GCCCAGCAAGCAGGATGTGT+TGG - chr4.3:23607238-23607257 MS.gene052516:CDS 60.0%
GCGCCAGACTCTGCAGTTAC+TGG + chr4.3:23607740-23607759 None:intergenic 60.0%
GGTGGCTACTGCCATTGCCT+TGG - chr4.3:23607760-23607779 MS.gene052516:CDS 60.0%
TGCTCCGGTGGATCAAGGGA+CGG - chr4.3:23607820-23607839 MS.gene052516:CDS 60.0%
! CATCCTGCTTGCTGGGCATC+CGG + chr4.3:23607235-23607254 None:intergenic 60.0%
!! GGACGCCAAAGCTCTGAAGC+TGG - chr4.3:23607493-23607512 MS.gene052516:CDS 60.0%
AACTGCAGAGTCTGGCGCGG+TGG - chr4.3:23607742-23607761 MS.gene052516:CDS 65.0%
GATGCAGGCGCCAACGGAAC+TGG - chr4.3:23607710-23607729 MS.gene052516:CDS 65.0%
GGTGGATACGAGTGCTCCGG+TGG - chr4.3:23607808-23607827 MS.gene052516:CDS 65.0%
TGGTGGAGCCCAAGGAGCTC+AGG - chr4.3:23607901-23607920 MS.gene052516:CDS 65.0%
GGAGCCCAAGGAGCTCAGGC+AGG - chr4.3:23607905-23607924 MS.gene052516:CDS 70.0%
TGGCCGGATGCCCAGCAAGC+AGG - chr4.3:23607229-23607248 MS.gene052516:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 23606948 23608051 23606948 ID=MS.gene052516
chr4.3 mRNA 23606948 23608051 23606948 ID=MS.gene052516.t1;Parent=MS.gene052516
chr4.3 exon 23606948 23608051 23606948 ID=MS.gene052516.t1.exon1;Parent=MS.gene052516.t1
chr4.3 CDS 23606948 23608051 23606948 ID=cds.MS.gene052516.t1;Parent=MS.gene052516.t1
Gene Sequence

>MS.gene052516

ATGGAGCCTTTCTTCGAGGAGTTGATAGTTGGTTGCTTTGTAAGAGTTGGAATCGGTAGATCTAAAACTGGACCTATCTATCGGCTCTGCATGGTGAAAAATGTTGATTCCTCAGACCCTGATCGACAGTATAAACTAGAGAACAAAACTACATACAAGTATTTGAATGTTGTTTGGGGAAATGAAAGCTCTGCTGCGAGGTGGCAAATGGCTATGATAAGCGACTCTCCTCCACTTGAAGAGGAATATAAGCAGTGGGTTAAGGAAGTGGAACGGAGTGGTGGCCGGATGCCCAGCAAGCAGGATGTGTTGGACAAAAAACAAGCTATAAATAAAATCATCACATTTGTCTACTCTGCTGCTACTGTGAAGCAGATGATACAAGAGAAAAAGTCTGCCTCGTCAAGGCCGCTAAATATTGCTGCTGAGAAGGATCGATTAAGGAGCGATTTGGAAAGAGCACAAGGTAAGAACGATGATGTGGAAGTGGAGAGGATCAAGGCAAGACTGCTAGAATTAGAGGCATCCAGACATGCAAAGGTGAAGGACGCCAAAGCTCTGAAGCTGGCTGAAATGAACAGAAAAAACAGGGTTGAAAATTTCAAAAATGCTTCTGAATTGAGGCCATTAACCGGTTTAAAAGAAGGGGATGCAGGTTATGATCCATTTTCAAGAAGGTGGACAAGATCAAGGAACTACTATGTTGCAACACCTAGTGAAAAGGCTGCTGCTTTAAATAATAATACAGTTGGCTTAGTTTCTGATGCAGGCGCCAACGGAACTGGAGTACCAGTAACTGCAGAGTCTGGCGCGGTGGCTACTGCCATTGCCTTGGAAGCTGCTGCTGATGCTGGAAAGTTGGTGGATACGAGTGCTCCGGTGGATCAAGGGACGGAATCGAATACACTGCACAACTTTGAGCTGCCAGTTTCATTAGCATTACTTCATAAGTATGGTGGAGCCCAAGGAGCTCAGGCAGGATTTATGGCAAGAAAACAAAGAATAGAATCAACAGTTGGATTTAAACTCTCGGAAAATGATGGCAGGAGACATGTATTGACTCTGTCAGTTGGTGATTACAAAAGAAGAAGAGGCCTTCTTTGA

Protein sequence

>MS.gene052516.t1

MEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMISDSPPLEEEYKQWVKEVERSGGRMPSKQDVLDKKQAINKIITFVYSAATVKQMIQEKKSASSRPLNIAAEKDRLRSDLERAQGKNDDVEVERIKARLLELEASRHAKVKDAKALKLAEMNRKNRVENFKNASELRPLTGLKEGDAGYDPFSRRWTRSRNYYVATPSEKAAALNNNTVGLVSDAGANGTGVPVTAESGAVATAIALEAAADAGKLVDTSAPVDQGTESNTLHNFELPVSLALLHKYGGAQGAQAGFMARKQRIESTVGFKLSENDGRRHVLTLSVGDYKRRRGLL