Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34600.t1 | XP_003605842.2 | 98.7 | 458 | 6 | 0 | 1 | 458 | 1 | 458 | 3.20E-260 | 907.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34600.t1 | O22216 | 84.0 | 450 | 72 | 0 | 7 | 456 | 12 | 461 | 1.6e-220 | 766.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34600.t1 | G7JUR3 | 98.7 | 458 | 6 | 0 | 1 | 458 | 1 | 458 | 2.3e-260 | 907.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050811 | MS.gene34600 | 0.820231 | 7.65E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34600.t1 | MTR_4g043650 | 98.690 | 458 | 6 | 0 | 1 | 458 | 1 | 458 | 0.0 | 932 |
| MS.gene34600.t1 | MTR_7g090970 | 84.444 | 450 | 70 | 0 | 8 | 457 | 8 | 457 | 0.0 | 797 |
| MS.gene34600.t1 | MTR_7g090970 | 85.366 | 410 | 60 | 0 | 8 | 417 | 8 | 417 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34600.t1 | AT2G41540 | 84.000 | 450 | 72 | 0 | 7 | 456 | 12 | 461 | 0.0 | 770 |
| MS.gene34600.t1 | AT2G41540 | 84.000 | 450 | 72 | 0 | 7 | 456 | 12 | 461 | 0.0 | 770 |
| MS.gene34600.t1 | AT2G41540 | 84.000 | 450 | 72 | 0 | 7 | 456 | 12 | 461 | 0.0 | 770 |
| MS.gene34600.t1 | AT2G41540 | 84.000 | 450 | 72 | 0 | 7 | 456 | 12 | 461 | 0.0 | 770 |
| MS.gene34600.t1 | AT3G07690 | 82.955 | 440 | 75 | 0 | 19 | 458 | 17 | 456 | 0.0 | 769 |
| MS.gene34600.t1 | AT3G07690 | 81.111 | 450 | 75 | 1 | 19 | 458 | 17 | 466 | 0.0 | 760 |
| MS.gene34600.t1 | AT5G40610 | 26.988 | 415 | 217 | 20 | 30 | 426 | 48 | 394 | 7.35e-15 | 76.6 |
Find 111 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACACAAACTATTCTTAA+TGG | 0.215988 | 4.3:-59486266 | None:intergenic |
| CATCATCAACTTTCCCCATT+AGG | 0.251148 | 4.3:-59486241 | None:intergenic |
| GGTTCTCTTCAAAGTGTAAA+TGG | 0.275107 | 4.3:+59486185 | MS.gene34600:CDS |
| ATCATCAACTTTCCCCATTA+GGG | 0.290579 | 4.3:-59486240 | None:intergenic |
| TATATAAAATACTAATATTA+AGG | 0.295699 | 4.3:+59489020 | MS.gene34600:CDS |
| TTGTGTTGGAGGTGGTGCTT+GGG | 0.318205 | 4.3:+59486280 | MS.gene34600:CDS |
| TTTGTGTTGGAGGTGGTGCT+TGG | 0.332168 | 4.3:+59486279 | MS.gene34600:CDS |
| ATTGAAAATATTCTCTATCT+TGG | 0.332464 | 4.3:+59487052 | MS.gene34600:CDS |
| TGATGCTGTCACCCATTTCA+AGG | 0.343219 | 4.3:-59488766 | None:intergenic |
| TCGAGGGGAGATTAGGTGAT+AGG | 0.347018 | 4.3:+59486489 | MS.gene34600:CDS |
| AGTTCCTGTCATTATTTCAT+TGG | 0.352790 | 4.3:+59486706 | MS.gene34600:CDS |
| CAAGGGCAAGGGGATGATTC+AGG | 0.359334 | 4.3:+59488787 | MS.gene34600:CDS |
| TGTCATTATTTCATTGGCTA+AGG | 0.362222 | 4.3:+59486712 | MS.gene34600:CDS |
| TTCAAGGCTCAATTCTCCTT+TGG | 0.370084 | 4.3:-59488750 | None:intergenic |
| AGAGGGCCTGCAAGTTTCTC+TGG | 0.371971 | 4.3:-59488665 | None:intergenic |
| CGATGAGCTTAGAACCCTAA+TGG | 0.382015 | 4.3:+59486226 | MS.gene34600:CDS |
| TAAGGGTGTGGAGGCTGAAT+TGG | 0.382414 | 4.3:+59486730 | MS.gene34600:CDS |
| GAAGAACCAGAGAAACTTGC+AGG | 0.385116 | 4.3:+59488659 | MS.gene34600:CDS |
| TACACCTGTTTGCCCTTTGA+AGG | 0.390970 | 4.3:+59486565 | MS.gene34600:CDS |
| AGGAGAATTGAGCCTTGAAA+TGG | 0.391296 | 4.3:+59488754 | MS.gene34600:CDS |
| GAAGGTTGTGACGAATTTGC+AGG | 0.392149 | 4.3:+59486583 | MS.gene34600:CDS |
| ATGTGTTGAGGAGGTTGATT+AGG | 0.393435 | 4.3:+59486444 | MS.gene34600:CDS |
| TCTTGTTACTCATGAAGTTA+TGG | 0.394359 | 4.3:+59487207 | MS.gene34600:CDS |
| TTGAAGAAATTAGTAAGTAT+TGG | 0.395541 | 4.3:+59486669 | MS.gene34600:CDS |
| GCTCTATCAACAGCTCTTCC+TGG | 0.408239 | 4.3:-59486380 | None:intergenic |
| TTAAAGAATGTATATGCAAT+TGG | 0.421984 | 4.3:+59487235 | MS.gene34600:CDS |
| GATGAGCTTAGAACCCTAAT+GGG | 0.422174 | 4.3:+59486227 | MS.gene34600:CDS |
| CTTGTTACTCATGAAGTTAT+GGG | 0.422177 | 4.3:+59487208 | MS.gene34600:CDS |
| CGAATTTGCAGGAAGCTGTA+TGG | 0.426348 | 4.3:+59486594 | MS.gene34600:CDS |
| AAATATGTCGAGGGGAGATT+AGG | 0.426665 | 4.3:+59486482 | MS.gene34600:CDS |
| TAAATCTCGGAGGCAATGTT+AGG | 0.432930 | 4.3:-59487079 | None:intergenic |
| GGTGTTATGATCCGCGGCTC+AGG | 0.435974 | 4.3:-59486755 | None:intergenic |
| ACGGTCTCGAGGATCGTTCA+TGG | 0.439816 | 4.3:-59489597 | None:intergenic |
| AAGATGGGACAAAGCTCGAC+AGG | 0.442551 | 4.3:-59488989 | None:intergenic |
| ATATTCTTTGTTGTAAATCT+CGG | 0.448562 | 4.3:-59487092 | None:intergenic |
| GAAACTTGCAGGCCCTCTCT+TGG | 0.454109 | 4.3:+59488670 | MS.gene34600:CDS |
| TATTTCATTGGCTAAGGGTG+TGG | 0.456675 | 4.3:+59486718 | MS.gene34600:CDS |
| GCTTGAAGTATAGCCTGTAC+TGG | 0.457035 | 4.3:-59489560 | None:intergenic |
| GTCATTATTTCATTGGCTAA+GGG | 0.457401 | 4.3:+59486713 | MS.gene34600:CDS |
| TTAAGAATAGTTTGTGTTGG+AGG | 0.461442 | 4.3:+59486269 | MS.gene34600:CDS |
| TTTATATAACATCTTCAAGA+TGG | 0.462752 | 4.3:-59489005 | None:intergenic |
| CCATTAAGAATAGTTTGTGT+TGG | 0.472093 | 4.3:+59486266 | MS.gene34600:CDS |
| ACAACCTTCAAAGGGCAAAC+AGG | 0.479400 | 4.3:-59486569 | None:intergenic |
| GAAAATATTCTCTATCTTGG+AGG | 0.480816 | 4.3:+59487055 | MS.gene34600:CDS |
| GGCTCTGTGCAATCTTAATA+CGG | 0.483487 | 4.3:-59489616 | None:intergenic |
| GCTATGTTACAAGAGGCTTA+TGG | 0.483493 | 4.3:+59486317 | MS.gene34600:CDS |
| GGGTGACAGCATCAAGGGCA+AGG | 0.485731 | 4.3:+59488775 | MS.gene34600:CDS |
| GGCAAAGTAGACTGATTTGC+TGG | 0.487927 | 4.3:-59488594 | None:intergenic |
| TTATATAACATCTTCAAGAT+GGG | 0.503001 | 4.3:-59489004 | None:intergenic |
| AACCATCATGGATACTCAAA+TGG | 0.503751 | 4.3:+59486164 | MS.gene34600:CDS |
| TTCATTGGCTAAGGGTGTGG+AGG | 0.505926 | 4.3:+59486721 | MS.gene34600:CDS |
| AAATTCGTCACAACCTTCAA+AGG | 0.506986 | 4.3:-59486578 | None:intergenic |
| TAATTTCTTCAAACACCTCA+CGG | 0.507384 | 4.3:-59486658 | None:intergenic |
| AATGTATATGCAATTGGAGC+AGG | 0.513242 | 4.3:+59487241 | MS.gene34600:CDS |
| GTTTGAAGTGATTAATTCGA+GGG | 0.516179 | 4.3:+59486418 | MS.gene34600:CDS |
| AAAGGTCGTAATGCATGGTA+TGG | 0.519099 | 4.3:+59488716 | MS.gene34600:CDS |
| GGAGAATTGAGCCTTGAAAT+GGG | 0.522487 | 4.3:+59488755 | MS.gene34600:CDS |
| TATGCAAATGCTCGAATATG+TGG | 0.524238 | 4.3:+59487112 | MS.gene34600:CDS |
| CTTCAGGGAATCTCCAGTAC+AGG | 0.526916 | 4.3:+59489547 | MS.gene34600:intron |
| AGGATCTAAGACATTTAAGC+TGG | 0.528053 | 4.3:-59488945 | None:intergenic |
| ACCTCACGGGTTTCTGTCGA+TGG | 0.528482 | 4.3:-59486644 | None:intergenic |
| TGCATGGTATGGACAAAAGT+TGG | 0.531855 | 4.3:+59488727 | MS.gene34600:CDS |
| GGTGACAGCATCAAGGGCAA+GGG | 0.540284 | 4.3:+59488776 | MS.gene34600:CDS |
| GATGCTGACATTGTGATTAA+CGG | 0.543527 | 4.3:+59486617 | MS.gene34600:CDS |
| AATTTCTTCAAACACCTCAC+GGG | 0.548801 | 4.3:-59486657 | None:intergenic |
| CGAGGGGAGATTAGGTGATA+GGG | 0.549275 | 4.3:+59486490 | MS.gene34600:CDS |
| GGCTGCTGACCAAGAAGAGA+TGG | 0.553433 | 4.3:-59489653 | None:intergenic |
| TGAAATGGGTGACAGCATCA+AGG | 0.560053 | 4.3:+59488769 | MS.gene34600:CDS |
| TGTGTTGGAGGTGGTGCTTG+GGG | 0.568789 | 4.3:+59486281 | MS.gene34600:CDS |
| ACTTATGTAACCTTGTTGAA+AGG | 0.569017 | 4.3:+59488698 | MS.gene34600:CDS |
| AATTCGTCACAACCTTCAAA+GGG | 0.569811 | 4.3:-59486577 | None:intergenic |
| AGAATAGTTTGTGTTGGAGG+TGG | 0.570515 | 4.3:+59486272 | MS.gene34600:CDS |
| GAAATGGGTGACAGCATCAA+GGG | 0.570576 | 4.3:+59488770 | MS.gene34600:CDS |
| TGAAGTGATTAATTCGAGGG+AGG | 0.572910 | 4.3:+59486421 | MS.gene34600:CDS |
| TGTTTGAAGTGATTAATTCG+AGG | 0.574810 | 4.3:+59486417 | MS.gene34600:CDS |
| GAATTTGCAGGAAGCTGTAT+GGG | 0.578928 | 4.3:+59486595 | MS.gene34600:CDS |
| GGCAGGCGCACTTTATAGTG+TGG | 0.581523 | 4.3:+59487173 | MS.gene34600:CDS |
| TTAGCCAATGAAATAATGAC+AGG | 0.582773 | 4.3:-59486710 | None:intergenic |
| AATCATCTCTGATGTGCAGT+GGG | 0.583743 | 4.3:-59488615 | None:intergenic |
| GTGACAGCATCAAGGGCAAG+GGG | 0.585669 | 4.3:+59488777 | MS.gene34600:CDS |
| AACCATTTGAGTATCCATGA+TGG | 0.585718 | 4.3:-59486166 | None:intergenic |
| GTTTACAGCTATGTTACAAG+AGG | 0.586719 | 4.3:+59486310 | MS.gene34600:CDS |
| GGATCAAAGATGAACCATCA+TGG | 0.587501 | 4.3:+59486152 | None:intergenic |
| CGAGGGAGGATGTGTTGAGG+AGG | 0.589261 | 4.3:+59486435 | MS.gene34600:CDS |
| TGTTGAAAGGTCGTAATGCA+TGG | 0.592104 | 4.3:+59488711 | MS.gene34600:CDS |
| GTTACTCATGAAGTTATGGG+TGG | 0.597858 | 4.3:+59487211 | MS.gene34600:CDS |
| TTCAAACAAATGCGTAGCCG+TGG | 0.598990 | 4.3:-59486402 | None:intergenic |
| ATTAGGATATGGAGAAGACC+AGG | 0.601604 | 4.3:+59486362 | MS.gene34600:CDS |
| TGCGTATTTGAAATATGTCG+AGG | 0.602106 | 4.3:+59486472 | MS.gene34600:CDS |
| GCAGGCGCACTTTATAGTGT+GGG | 0.609902 | 4.3:+59487174 | MS.gene34600:CDS |
| CTGAATTGGTTCCTGAGCCG+CGG | 0.610242 | 4.3:+59486744 | MS.gene34600:CDS |
| GCGTATTTGAAATATGTCGA+GGG | 0.611600 | 4.3:+59486473 | MS.gene34600:CDS |
| AAATCATCTCTGATGTGCAG+TGG | 0.612190 | 4.3:-59488616 | None:intergenic |
| AGATGGGACAAAGCTCGACA+GGG | 0.616695 | 4.3:-59488988 | None:intergenic |
| TTCTTTGTTGTAAATCTCGG+AGG | 0.618426 | 4.3:-59487089 | None:intergenic |
| CATAAGTATCAGCCAAGAGA+GGG | 0.625499 | 4.3:-59488682 | None:intergenic |
| ACATAAGTATCAGCCAAGAG+AGG | 0.630335 | 4.3:-59488683 | None:intergenic |
| TGCATTACGACCTTTCAACA+AGG | 0.634314 | 4.3:-59488708 | None:intergenic |
| GCTGACCAAGAAGAGATGGC+CGG | 0.634478 | 4.3:-59489649 | None:intergenic |
| ATTCGAGGGAGGATGTGTTG+AGG | 0.636238 | 4.3:+59486432 | MS.gene34600:CDS |
| AGCGTAGGTGTTATGATCCG+CGG | 0.638818 | 4.3:-59486761 | None:intergenic |
| AAGAGCTGTTGATAGAGCCA+CGG | 0.655534 | 4.3:+59486385 | MS.gene34600:CDS |
| TATGGACAAAAGTTGGCCAA+AGG | 0.655927 | 4.3:+59488734 | MS.gene34600:CDS |
| GCTCGACTGATCATTAGCGT+AGG | 0.663687 | 4.3:-59486776 | None:intergenic |
| CGTATTTGAAATATGTCGAG+GGG | 0.666107 | 4.3:+59486474 | MS.gene34600:CDS |
| GAGATGGCCGGTAAAACACA+TGG | 0.670898 | 4.3:-59489637 | None:intergenic |
| GCAATCTTAATACGGTCTCG+AGG | 0.681700 | 4.3:-59489608 | None:intergenic |
| GATGGGACAAAGCTCGACAG+GGG | 0.689704 | 4.3:-59488987 | None:intergenic |
| ATGAGCTTAGAACCCTAATG+GGG | 0.692619 | 4.3:+59486228 | MS.gene34600:CDS |
| AAAGTAGACTGATTTGCTGG+TGG | 0.693461 | 4.3:-59488591 | None:intergenic |
| GCCATCGACAGAAACCCGTG+AGG | 0.775448 | 4.3:+59486643 | MS.gene34600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTTAAAATTTCATTTT+GGG | + | chr4.3:59487618-59487637 | MS.gene34600:intron | 10.0% |
| !! | ATTTCAATAATATTTCCTAT+TGG | - | chr4.3:59489429-59489448 | None:intergenic | 15.0% |
| !!! | CATTGTTTAAAATTTCATTT+TGG | + | chr4.3:59487617-59487636 | MS.gene34600:intron | 15.0% |
| !! | AAACAATAAATTTCATTGTG+TGG | - | chr4.3:59486869-59486888 | None:intergenic | 20.0% |
| !! | AGAAACTAAAATCAAATCAA+GGG | - | chr4.3:59486987-59487006 | None:intergenic | 20.0% |
| !! | ATTGAAAATATTCTCTATCT+TGG | + | chr4.3:59487052-59487071 | MS.gene34600:CDS | 20.0% |
| !! | TATAAACAACAATTGAATGT+AGG | - | chr4.3:59487444-59487463 | None:intergenic | 20.0% |
| !! | TTAAAGAATGTATATGCAAT+TGG | + | chr4.3:59487235-59487254 | MS.gene34600:CDS | 20.0% |
| !! | TTATATAACATCTTCAAGAT+GGG | - | chr4.3:59489007-59489026 | None:intergenic | 20.0% |
| !! | TTGAAGAAATTAGTAAGTAT+TGG | + | chr4.3:59486669-59486688 | MS.gene34600:CDS | 20.0% |
| !! | TTTATATAACATCTTCAAGA+TGG | - | chr4.3:59489008-59489027 | None:intergenic | 20.0% |
| !!! | AAATAATTACTCCTTTTGAA+TGG | - | chr4.3:59488267-59488286 | None:intergenic | 20.0% |
| !!! | AAGATAGAGAATATTTTCAA+TGG | - | chr4.3:59487053-59487072 | None:intergenic | 20.0% |
| !!! | AGATAGAGAATATTTTCAAT+GGG | - | chr4.3:59487052-59487071 | None:intergenic | 20.0% |
| !!! | ATATTCTTTGTTGTAAATCT+CGG | - | chr4.3:59487095-59487114 | None:intergenic | 20.0% |
| ! | AAAATTCATAAAAGGATTGC+TGG | - | chr4.3:59489151-59489170 | None:intergenic | 25.0% |
| ! | AACTATCAAGAAAGACTTAA+AGG | + | chr4.3:59487988-59488007 | MS.gene34600:intron | 25.0% |
| ! | CAAATCTGTCTTTAGTTAAA+AGG | - | chr4.3:59489266-59489285 | None:intergenic | 25.0% |
| ! | CAGAAACTAAAATCAAATCA+AGG | - | chr4.3:59486988-59487007 | None:intergenic | 25.0% |
| ! | CAGTTGAAATTTCATTTAAG+AGG | + | chr4.3:59487415-59487434 | MS.gene34600:intron | 25.0% |
| ! | GAAAAAGTTAGTTACATAAC+TGG | - | chr4.3:59489500-59489519 | None:intergenic | 25.0% |
| ! | GCAATTATATCAAATAAGAC+AGG | - | chr4.3:59487396-59487415 | None:intergenic | 25.0% |
| ! | GGAATATCAAGAAGAATTAT+AGG | + | chr4.3:59487962-59487981 | MS.gene34600:intron | 25.0% |
| ! | GTTGGAACAAAATTCATAAA+AGG | - | chr4.3:59489159-59489178 | None:intergenic | 25.0% |
| !! | AAGTTTTTCTACCATTCAAA+AGG | + | chr4.3:59488253-59488272 | MS.gene34600:intron | 25.0% |
| !! | ATCAATACCATTTGTTAGAA+AGG | + | chr4.3:59488128-59488147 | MS.gene34600:intron | 25.0% |
| !! | ATTTCATTCAAGTTTCTACT+TGG | + | chr4.3:59488839-59488858 | MS.gene34600:intron | 25.0% |
| !! | GATAGAGAATATTTTCAATG+GGG | - | chr4.3:59487051-59487070 | None:intergenic | 25.0% |
| !! | GATTTTTATCACTCATCTAT+TGG | + | chr4.3:59488634-59488653 | MS.gene34600:CDS | 25.0% |
| !! | TCAATCATCTTTTCTACAAT+AGG | - | chr4.3:59487766-59487785 | None:intergenic | 25.0% |
| !! | TCATTAGTTTCTTTATGTTG+TGG | + | chr4.3:59486824-59486843 | MS.gene34600:intron | 25.0% |
| !! | TGTTTTGCCAGATATTATTT+GGG | + | chr4.3:59487520-59487539 | MS.gene34600:intron | 25.0% |
| !! | TTATGATGATCGATTTAACA+GGG | + | chr4.3:59488540-59488559 | MS.gene34600:intron | 25.0% |
| !! | TTTATGATGATCGATTTAAC+AGG | + | chr4.3:59488539-59488558 | MS.gene34600:intron | 25.0% |
| !!! | CTTGATTTGATTTTAGTTTC+TGG | + | chr4.3:59486986-59487005 | MS.gene34600:intron | 25.0% |
| !!! | TAAAAGGTGCATTTTAACTA+CGG | - | chr4.3:59489250-59489269 | None:intergenic | 25.0% |
| !!! | TATGTAACTAACTTTTTCTG+TGG | + | chr4.3:59489502-59489521 | MS.gene34600:intron | 25.0% |
| !!! | TTGTTTTGCCAGATATTATT+TGG | + | chr4.3:59487519-59487538 | MS.gene34600:intron | 25.0% |
| AACTAAAGACAGATTTGTGT+GGG | + | chr4.3:59489269-59489288 | MS.gene34600:intron | 30.0% | |
| AAGCTAGGAAAATAAACACA+AGG | - | chr4.3:59488293-59488312 | None:intergenic | 30.0% | |
| AATCTCGACTTAGATGATTT+GGG | + | chr4.3:59487785-59487804 | MS.gene34600:intron | 30.0% | |
| ACATTTAACTGCACTATAAG+AGG | - | chr4.3:59488490-59488509 | None:intergenic | 30.0% | |
| ACTTATGTAACCTTGTTGAA+AGG | + | chr4.3:59488698-59488717 | MS.gene34600:CDS | 30.0% | |
| AGTTCCTGTCATTATTTCAT+TGG | + | chr4.3:59486706-59486725 | MS.gene34600:CDS | 30.0% | |
| CACACATAAATAACATCAAG+AGG | - | chr4.3:59488438-59488457 | None:intergenic | 30.0% | |
| CATTTAACTGCACTATAAGA+GGG | - | chr4.3:59488489-59488508 | None:intergenic | 30.0% | |
| CCAACACAAACTATTCTTAA+TGG | - | chr4.3:59486269-59486288 | None:intergenic | 30.0% | |
| CTTGTTACTCATGAAGTTAT+GGG | + | chr4.3:59487208-59487227 | MS.gene34600:CDS | 30.0% | |
| GAAAATATTCTCTATCTTGG+AGG | + | chr4.3:59487055-59487074 | MS.gene34600:CDS | 30.0% | |
| TAACTAAAGACAGATTTGTG+TGG | + | chr4.3:59489268-59489287 | MS.gene34600:intron | 30.0% | |
| TAATTTCTTCAAACACCTCA+CGG | - | chr4.3:59486661-59486680 | None:intergenic | 30.0% | |
| TCAGTGAATCCTTATATGTA+TGG | + | chr4.3:59487684-59487703 | MS.gene34600:intron | 30.0% | |
| TCTAGTTAGAATTGTTCAGA+TGG | + | chr4.3:59488173-59488192 | MS.gene34600:intron | 30.0% | |
| TCTGTGATATCGTATTCTTT+AGG | + | chr4.3:59489201-59489220 | MS.gene34600:intron | 30.0% | |
| TCTTGTTACTCATGAAGTTA+TGG | + | chr4.3:59487207-59487226 | MS.gene34600:CDS | 30.0% | |
| TGAATGGTAGAAAAACTTGT+TGG | - | chr4.3:59488251-59488270 | None:intergenic | 30.0% | |
| TGATATTCCTTTACCTCTAA+TGG | - | chr4.3:59487951-59487970 | None:intergenic | 30.0% | |
| TTAGCCAATGAAATAATGAC+AGG | - | chr4.3:59486713-59486732 | None:intergenic | 30.0% | |
| ! | ATTTTCCTAGCTTCAATGAT+TGG | + | chr4.3:59488300-59488319 | MS.gene34600:intron | 30.0% |
| ! | CCATTAAGAATAGTTTGTGT+TGG | + | chr4.3:59486266-59486285 | MS.gene34600:CDS | 30.0% |
| ! | CTAGTTCTTCCATACATATA+AGG | - | chr4.3:59487696-59487715 | None:intergenic | 30.0% |
| ! | GTCATTATTTCATTGGCTAA+GGG | + | chr4.3:59486713-59486732 | MS.gene34600:CDS | 30.0% |
| ! | GTTTGAAGTGATTAATTCGA+GGG | + | chr4.3:59486418-59486437 | MS.gene34600:CDS | 30.0% |
| ! | TGTCATTATTTCATTGGCTA+AGG | + | chr4.3:59486712-59486731 | MS.gene34600:CDS | 30.0% |
| ! | TGTTTGAAGTGATTAATTCG+AGG | + | chr4.3:59486417-59486436 | MS.gene34600:CDS | 30.0% |
| ! | TTAAGAATAGTTTGTGTTGG+AGG | + | chr4.3:59486269-59486288 | MS.gene34600:CDS | 30.0% |
| ! | TTAGTATTTTTCTTCCATGC+CGG | + | chr4.3:59487843-59487862 | MS.gene34600:intron | 30.0% |
| !! | CAGATGAGATTTTGAAAGAT+GGG | + | chr4.3:59486522-59486541 | MS.gene34600:CDS | 30.0% |
| !! | TTAGATGATTTGGGTTTTTG+TGG | + | chr4.3:59487794-59487813 | MS.gene34600:intron | 30.0% |
| !! | TTTGGGTTGTTAGAGATTAT+GGG | + | chr4.3:59487635-59487654 | MS.gene34600:intron | 30.0% |
| !!! | ACAAGGTTTTGATTAGGATA+TGG | + | chr4.3:59486351-59486370 | MS.gene34600:CDS | 30.0% |
| !!! | AGATGGGTTTTGTTTGAATA+TGG | + | chr4.3:59486538-59486557 | MS.gene34600:CDS | 30.0% |
| !!! | TTAGAGACAAGGTTTTGATT+AGG | + | chr4.3:59486345-59486364 | MS.gene34600:CDS | 30.0% |
| !!! | TTATGGTAGTTTTAGAGACA+AGG | + | chr4.3:59486334-59486353 | MS.gene34600:CDS | 30.0% |
| !!! | TTTTCTGTGGTTTTGATTTG+TGG | + | chr4.3:59489515-59489534 | MS.gene34600:intron | 30.0% |
| !!! | TTTTGGGTTGTTAGAGATTA+TGG | + | chr4.3:59487634-59487653 | MS.gene34600:intron | 30.0% |
| AAAGTTCACGATTAGAATCC+CGG | - | chr4.3:59487865-59487884 | None:intergenic | 35.0% | |
| AAATTCGTCACAACCTTCAA+AGG | - | chr4.3:59486581-59486600 | None:intergenic | 35.0% | |
| AACCATCATGGATACTCAAA+TGG | + | chr4.3:59486164-59486183 | MS.gene34600:CDS | 35.0% | |
| AACCATTTGAGTATCCATGA+TGG | - | chr4.3:59486169-59486188 | None:intergenic | 35.0% | |
| AACTCAACCATTAGAGGTAA+AGG | + | chr4.3:59487941-59487960 | MS.gene34600:intron | 35.0% | |
| AATACGATATCACAGAACAG+CGG | - | chr4.3:59489197-59489216 | None:intergenic | 35.0% | |
| AATGTATATGCAATTGGAGC+AGG | + | chr4.3:59487241-59487260 | MS.gene34600:CDS | 35.0% | |
| AATTCGTCACAACCTTCAAA+GGG | - | chr4.3:59486580-59486599 | None:intergenic | 35.0% | |
| AATTTCTTCAAACACCTCAC+GGG | - | chr4.3:59486660-59486679 | None:intergenic | 35.0% | |
| AGAAAAATGGAGGAAACCAT+TGG | + | chr4.3:59487138-59487157 | MS.gene34600:CDS | 35.0% | |
| AGACTTAAAGGTCAGTGATT+TGG | + | chr4.3:59488000-59488019 | MS.gene34600:intron | 35.0% | |
| ATAATATTTCCTATTGGCGC+AGG | - | chr4.3:59489423-59489442 | None:intergenic | 35.0% | |
| ATCATCAACTTTCCCCATTA+GGG | - | chr4.3:59486243-59486262 | None:intergenic | 35.0% | |
| ATTCATAAAAGGATTGCTGG+AGG | - | chr4.3:59489148-59489167 | None:intergenic | 35.0% | |
| GAATATGTGGAGCAGAAAAA+TGG | + | chr4.3:59487125-59487144 | MS.gene34600:CDS | 35.0% | |
| GAATCTCGACTTAGATGATT+TGG | + | chr4.3:59487784-59487803 | MS.gene34600:intron | 35.0% | |
| GATGCTGACATTGTGATTAA+CGG | + | chr4.3:59486617-59486636 | MS.gene34600:CDS | 35.0% | |
| GGTTCTCTTCAAAGTGTAAA+TGG | + | chr4.3:59486185-59486204 | MS.gene34600:CDS | 35.0% | |
| GTTGTTAGAGATTATGGGTT+GGG | + | chr4.3:59487640-59487659 | MS.gene34600:intron | 35.0% | |
| GTTTACAGCTATGTTACAAG+AGG | + | chr4.3:59486310-59486329 | MS.gene34600:CDS | 35.0% | |
| TATGCAAATGCTCGAATATG+TGG | + | chr4.3:59487112-59487131 | MS.gene34600:CDS | 35.0% | |
| TTCATAAAAGGATTGCTGGA+GGG | - | chr4.3:59489147-59489166 | None:intergenic | 35.0% | |
| TTGAGCTCCTTTCTAACAAA+TGG | - | chr4.3:59488138-59488157 | None:intergenic | 35.0% | |
| TTGATATTATGCTTTGCAGC+TGG | + | chr4.3:59487022-59487041 | MS.gene34600:intron | 35.0% | |
| TTGCCAGATATTATTTGGGA+GGG | + | chr4.3:59487524-59487543 | MS.gene34600:intron | 35.0% | |
| TTTAACTACGGACAAAACTG+TGG | - | chr4.3:59489238-59489257 | None:intergenic | 35.0% | |
| TTTGCCAGATATTATTTGGG+AGG | + | chr4.3:59487523-59487542 | MS.gene34600:intron | 35.0% | |
| ! | AAAATCAGCCTTATCACACT+AGG | - | chr4.3:59488091-59488110 | None:intergenic | 35.0% |
| ! | AACCATTGGCAAAGTTTTTG+AGG | + | chr4.3:59487152-59487171 | MS.gene34600:CDS | 35.0% |
| ! | AGGATCTAAGACATTTAAGC+TGG | - | chr4.3:59488948-59488967 | None:intergenic | 35.0% |
| ! | ATTTTGCCTTCCATCTTGTA+GGG | + | chr4.3:59488881-59488900 | MS.gene34600:intron | 35.0% |
| ! | CGTATTTGAAATATGTCGAG+GGG | + | chr4.3:59486474-59486493 | MS.gene34600:CDS | 35.0% |
| ! | CTGTTTTCTCATTCAAAGAG+AGG | - | chr4.3:59489085-59489104 | None:intergenic | 35.0% |
| ! | GCGTATTTGAAATATGTCGA+GGG | + | chr4.3:59486473-59486492 | MS.gene34600:CDS | 35.0% |
| ! | TAGTATTTTTCTTCCATGCC+GGG | + | chr4.3:59487844-59487863 | MS.gene34600:intron | 35.0% |
| ! | TATTTTGCCTTCCATCTTGT+AGG | + | chr4.3:59488880-59488899 | MS.gene34600:intron | 35.0% |
| ! | TGCGTATTTGAAATATGTCG+AGG | + | chr4.3:59486472-59486491 | MS.gene34600:CDS | 35.0% |
| ! | TTCTTTGTTGTAAATCTCGG+AGG | - | chr4.3:59487092-59487111 | None:intergenic | 35.0% |
| ! | TTGTTAGAGATTATGGGTTG+GGG | + | chr4.3:59487641-59487660 | MS.gene34600:intron | 35.0% |
| !! | AAGTGTCGTTCTTTTAAGCT+AGG | - | chr4.3:59487593-59487612 | None:intergenic | 35.0% |
| !! | GCAGATGAGATTTTGAAAGA+TGG | + | chr4.3:59486521-59486540 | MS.gene34600:CDS | 35.0% |
| AAAAACCGTTCAGCAGACTT+TGG | + | chr4.3:59489325-59489344 | MS.gene34600:intron | 40.0% | |
| AAAACCGTTCAGCAGACTTT+GGG | + | chr4.3:59489326-59489345 | MS.gene34600:intron | 40.0% | |
| AAAGGTCGTAATGCATGGTA+TGG | + | chr4.3:59488716-59488735 | MS.gene34600:CDS | 40.0% | |
| AAATATGTCGAGGGGAGATT+AGG | + | chr4.3:59486482-59486501 | MS.gene34600:CDS | 40.0% | |
| AAATCATCTCTGATGTGCAG+TGG | - | chr4.3:59488619-59488638 | None:intergenic | 40.0% | |
| AACATGCATTCAAATGCTCG+AGG | - | chr4.3:59486908-59486927 | None:intergenic | 40.0% | |
| AATCATCTCTGATGTGCAGT+GGG | - | chr4.3:59488618-59488637 | None:intergenic | 40.0% | |
| ACATAAGTATCAGCCAAGAG+AGG | - | chr4.3:59488686-59488705 | None:intergenic | 40.0% | |
| ACATGCATTCAAATGCTCGA+GGG | - | chr4.3:59486907-59486926 | None:intergenic | 40.0% | |
| ACGAACCAATCATTGAAGCT+AGG | - | chr4.3:59488308-59488327 | None:intergenic | 40.0% | |
| AGGAGAATTGAGCCTTGAAA+TGG | + | chr4.3:59488754-59488773 | MS.gene34600:CDS | 40.0% | |
| ATGAGCTTAGAACCCTAATG+GGG | + | chr4.3:59486228-59486247 | MS.gene34600:CDS | 40.0% | |
| ATGATTGCGTTAGAGAGAGT+TGG | + | chr4.3:59487733-59487752 | MS.gene34600:intron | 40.0% | |
| ATGGAAGAACTAGACGAGAT+AGG | + | chr4.3:59487703-59487722 | MS.gene34600:intron | 40.0% | |
| ATTAGGATATGGAGAAGACC+AGG | + | chr4.3:59486362-59486381 | MS.gene34600:CDS | 40.0% | |
| CATAAGTATCAGCCAAGAGA+GGG | - | chr4.3:59488685-59488704 | None:intergenic | 40.0% | |
| CATCATCAACTTTCCCCATT+AGG | - | chr4.3:59486244-59486263 | None:intergenic | 40.0% | |
| CTCTCTAACGCAATCATTTC+TGG | - | chr4.3:59487730-59487749 | None:intergenic | 40.0% | |
| GAATTTGCAGGAAGCTGTAT+GGG | + | chr4.3:59486595-59486614 | MS.gene34600:CDS | 40.0% | |
| GATGAGCTTAGAACCCTAAT+GGG | + | chr4.3:59486227-59486246 | MS.gene34600:CDS | 40.0% | |
| GCTATGTTACAAGAGGCTTA+TGG | + | chr4.3:59486317-59486336 | MS.gene34600:CDS | 40.0% | |
| GGAGAATTGAGCCTTGAAAT+GGG | + | chr4.3:59488755-59488774 | MS.gene34600:CDS | 40.0% | |
| GGCTCTGTGCAATCTTAATA+CGG | - | chr4.3:59489619-59489638 | None:intergenic | 40.0% | |
| GGTTGTTAGAGATTATGGGT+TGG | + | chr4.3:59487639-59487658 | MS.gene34600:intron | 40.0% | |
| GTTACTCATGAAGTTATGGG+TGG | + | chr4.3:59487211-59487230 | MS.gene34600:CDS | 40.0% | |
| TAAATCTCGGAGGCAATGTT+AGG | - | chr4.3:59487082-59487101 | None:intergenic | 40.0% | |
| TAGCCCTCCCAAATAATATC+TGG | - | chr4.3:59487530-59487549 | None:intergenic | 40.0% | |
| TATGGACAAAAGTTGGCCAA+AGG | + | chr4.3:59488734-59488753 | MS.gene34600:CDS | 40.0% | |
| TATGTGGAGCAGAAAAATGG+AGG | + | chr4.3:59487128-59487147 | MS.gene34600:CDS | 40.0% | |
| TCACTTGGTTGAGGGATTAA+AGG | - | chr4.3:59487900-59487919 | None:intergenic | 40.0% | |
| TGAAGTGATTAATTCGAGGG+AGG | + | chr4.3:59486421-59486440 | MS.gene34600:CDS | 40.0% | |
| TGCATGGTATGGACAAAAGT+TGG | + | chr4.3:59488727-59488746 | MS.gene34600:CDS | 40.0% | |
| TGCATTACGACCTTTCAACA+AGG | - | chr4.3:59488711-59488730 | None:intergenic | 40.0% | |
| TGCCTCAAAAACTTTGCCAA+TGG | - | chr4.3:59487157-59487176 | None:intergenic | 40.0% | |
| TGGAAGAACTAGACGAGATA+GGG | + | chr4.3:59487704-59487723 | MS.gene34600:intron | 40.0% | |
| TGTTGAAAGGTCGTAATGCA+TGG | + | chr4.3:59488711-59488730 | MS.gene34600:CDS | 40.0% | |
| TTCAAGGCTCAATTCTCCTT+TGG | - | chr4.3:59488753-59488772 | None:intergenic | 40.0% | |
| TTGAGGGATTAAAGGAGGTA+AGG | - | chr4.3:59487892-59487911 | None:intergenic | 40.0% | |
| TTGTGGACCTCTTATCTTCA+GGG | + | chr4.3:59489532-59489551 | MS.gene34600:intron | 40.0% | |
| TTTGTGGACCTCTTATCTTC+AGG | + | chr4.3:59489531-59489550 | MS.gene34600:intron | 40.0% | |
| ! | AAGGTCAGTGATTTGGATAG+TGG | + | chr4.3:59488007-59488026 | MS.gene34600:intron | 40.0% |
| ! | AGAATAGTTTGTGTTGGAGG+TGG | + | chr4.3:59486272-59486291 | MS.gene34600:CDS | 40.0% |
| ! | ATGTGTTGAGGAGGTTGATT+AGG | + | chr4.3:59486444-59486463 | MS.gene34600:CDS | 40.0% |
| ! | GATGATCGATTTAACAGGGA+TGG | + | chr4.3:59488544-59488563 | MS.gene34600:intron | 40.0% |
| ! | TATTTCATTGGCTAAGGGTG+TGG | + | chr4.3:59486718-59486737 | MS.gene34600:CDS | 40.0% |
| !! | AAAGTAGACTGATTTGCTGG+TGG | - | chr4.3:59488594-59488613 | None:intergenic | 40.0% |
| !! | GATGATTTGGGTTTTTGTGG+AGG | + | chr4.3:59487797-59487816 | MS.gene34600:intron | 40.0% |
| !! | GCAACATGCTTGTTTTCATC+AGG | - | chr4.3:59488968-59488987 | None:intergenic | 40.0% |
| !! | TCGAAGGTATTAACCGCTTT+GGG | - | chr4.3:59489306-59489325 | None:intergenic | 40.0% |
| !! | TTCGAAGGTATTAACCGCTT+TGG | - | chr4.3:59489307-59489326 | None:intergenic | 40.0% |
| !!! | ATTGGCAAAGTTTTTGAGGC+AGG | + | chr4.3:59487156-59487175 | MS.gene34600:CDS | 40.0% |
| ACAACCTTCAAAGGGCAAAC+AGG | - | chr4.3:59486572-59486591 | None:intergenic | 45.0% | |
| ATGAGTAGCTCACTTGGTTG+AGG | - | chr4.3:59487909-59487928 | None:intergenic | 45.0% | |
| CAGGAGCTCAAAAGTTAGGT+AGG | - | chr4.3:59489404-59489423 | None:intergenic | 45.0% | |
| CGAATTTGCAGGAAGCTGTA+TGG | + | chr4.3:59486594-59486613 | MS.gene34600:CDS | 45.0% | |
| CGATGAGCTTAGAACCCTAA+TGG | + | chr4.3:59486226-59486245 | MS.gene34600:CDS | 45.0% | |
| CTTATCACACTAGGTGGGAT+CGG | - | chr4.3:59488082-59488101 | None:intergenic | 45.0% | |
| CTTGGTTGAGGGATTAAAGG+AGG | - | chr4.3:59487897-59487916 | None:intergenic | 45.0% | |
| GAAATGGGTGACAGCATCAA+GGG | + | chr4.3:59488770-59488789 | MS.gene34600:CDS | 45.0% | |
| GAAGAACCAGAGAAACTTGC+AGG | + | chr4.3:59488659-59488678 | MS.gene34600:CDS | 45.0% | |
| GAAGGTTGTGACGAATTTGC+AGG | + | chr4.3:59486583-59486602 | MS.gene34600:CDS | 45.0% | |
| GCAATCTTAATACGGTCTCG+AGG | - | chr4.3:59489611-59489630 | None:intergenic | 45.0% | |
| GCTTGAAGTATAGCCTGTAC+TGG | - | chr4.3:59489563-59489582 | None:intergenic | 45.0% | |
| GGAGATTCCCTGAAGATAAG+AGG | - | chr4.3:59489542-59489561 | None:intergenic | 45.0% | |
| GGAGGGCTAAAAGATTAGAG+GGG | + | chr4.3:59487541-59487560 | MS.gene34600:intron | 45.0% | |
| GGGAGGGCTAAAAGATTAGA+GGG | + | chr4.3:59487540-59487559 | MS.gene34600:intron | 45.0% | |
| TACACCTGTTTGCCCTTTGA+AGG | + | chr4.3:59486565-59486584 | MS.gene34600:CDS | 45.0% | |
| TGAAATGGGTGACAGCATCA+AGG | + | chr4.3:59488769-59488788 | MS.gene34600:CDS | 45.0% | |
| TGAGTAGCTCACTTGGTTGA+GGG | - | chr4.3:59487908-59487927 | None:intergenic | 45.0% | |
| TGATCCCAAAGTCTGCTGAA+CGG | - | chr4.3:59489333-59489352 | None:intergenic | 45.0% | |
| TGATGCTGTCACCCATTTCA+AGG | - | chr4.3:59488769-59488788 | None:intergenic | 45.0% | |
| TGGGAGGGCTAAAAGATTAG+AGG | + | chr4.3:59487539-59487558 | MS.gene34600:intron | 45.0% | |
| TTCAAACAAATGCGTAGCCG+TGG | - | chr4.3:59486405-59486424 | None:intergenic | 45.0% | |
| ! | AAGAGCTGTTGATAGAGCCA+CGG | + | chr4.3:59486385-59486404 | MS.gene34600:CDS | 45.0% |
| ! | ATCAGCCTTATCACACTAGG+TGG | - | chr4.3:59488088-59488107 | None:intergenic | 45.0% |
| ! | CACAGAGCCATGTGTTTTAC+CGG | + | chr4.3:59489630-59489649 | MS.gene34600:CDS | 45.0% |
| ! | CAGATGAACCTGAGCTTTAG+CGG | + | chr4.3:59489102-59489121 | MS.gene34600:intron | 45.0% |
| ! | TCAGCCTTATCACACTAGGT+GGG | - | chr4.3:59488087-59488106 | None:intergenic | 45.0% |
| ! | TTTTACCGGCCATCTCTTCT+TGG | + | chr4.3:59489644-59489663 | MS.gene34600:CDS | 45.0% |
| !! | ATTATGGGTTGGGGATGAGT+AGG | + | chr4.3:59487650-59487669 | MS.gene34600:intron | 45.0% |
| !! | GGCAAAGTAGACTGATTTGC+TGG | - | chr4.3:59488597-59488616 | None:intergenic | 45.0% |
| !! | TCTGCTGAACGGTTTTTCGA+AGG | - | chr4.3:59489322-59489341 | None:intergenic | 45.0% |
| !! | TTATGGGTTGGGGATGAGTA+GGG | + | chr4.3:59487651-59487670 | MS.gene34600:intron | 45.0% |
| !! | TATATAAAATACTAATATTA+AGG | + | chr4.3:59489020-59489039 | MS.gene34600:CDS | 5.0% |
| AACAGCGGTTCAACAGACTC+GGG | - | chr4.3:59489182-59489201 | None:intergenic | 50.0% | |
| AAGATGGGACAAAGCTCGAC+AGG | - | chr4.3:59488992-59489011 | None:intergenic | 50.0% | |
| AGATGGGACAAAGCTCGACA+GGG | - | chr4.3:59488991-59489010 | None:intergenic | 50.0% | |
| AGCAGAGACTCCCTACAAGA+TGG | - | chr4.3:59488894-59488913 | None:intergenic | 50.0% | |
| ATTCGAGGGAGGATGTGTTG+AGG | + | chr4.3:59486432-59486451 | MS.gene34600:CDS | 50.0% | |
| CGAGGGGAGATTAGGTGATA+GGG | + | chr4.3:59486490-59486509 | MS.gene34600:CDS | 50.0% | |
| CGATCCCACCTAGTGTGATA+AGG | + | chr4.3:59488080-59488099 | MS.gene34600:intron | 50.0% | |
| CTTCAGGGAATCTCCAGTAC+AGG | + | chr4.3:59489547-59489566 | MS.gene34600:intron | 50.0% | |
| GAACAGCGGTTCAACAGACT+CGG | - | chr4.3:59489183-59489202 | None:intergenic | 50.0% | |
| GAGACTCCCTACAAGATGGA+AGG | - | chr4.3:59488890-59488909 | None:intergenic | 50.0% | |
| GAGATGGCCGGTAAAACACA+TGG | - | chr4.3:59489640-59489659 | None:intergenic | 50.0% | |
| GCAGGCGCACTTTATAGTGT+GGG | + | chr4.3:59487174-59487193 | MS.gene34600:CDS | 50.0% | |
| GCTCGACTGATCATTAGCGT+AGG | - | chr4.3:59486779-59486798 | None:intergenic | 50.0% | |
| GCTCTATCAACAGCTCTTCC+TGG | - | chr4.3:59486383-59486402 | None:intergenic | 50.0% | |
| GGCTTACACAAGACCCAAAG+CGG | + | chr4.3:59489290-59489309 | MS.gene34600:intron | 50.0% | |
| GGGGATGAGTAGGGAGTTAT+TGG | + | chr4.3:59487660-59487679 | MS.gene34600:intron | 50.0% | |
| GGGGGTAACTCAACCATTAG+AGG | + | chr4.3:59487935-59487954 | MS.gene34600:intron | 50.0% | |
| TAATGGTTGAGTTACCCCCC+CGG | - | chr4.3:59487934-59487953 | None:intergenic | 50.0% | |
| TCACGATTAGAATCCCGGCA+TGG | - | chr4.3:59487860-59487879 | None:intergenic | 50.0% | |
| TCGAGGGGAGATTAGGTGAT+AGG | + | chr4.3:59486489-59486508 | MS.gene34600:CDS | 50.0% | |
| TTGTGTTGGAGGTGGTGCTT+GGG | + | chr4.3:59486280-59486299 | MS.gene34600:CDS | 50.0% | |
| TTTGTGTTGGAGGTGGTGCT+TGG | + | chr4.3:59486279-59486298 | MS.gene34600:CDS | 50.0% | |
| ! | AGCGTAGGTGTTATGATCCG+CGG | - | chr4.3:59486764-59486783 | None:intergenic | 50.0% |
| ! | TAAGGGTGTGGAGGCTGAAT+TGG | + | chr4.3:59486730-59486749 | MS.gene34600:CDS | 50.0% |
| ! | TTCATTGGCTAAGGGTGTGG+AGG | + | chr4.3:59486721-59486740 | MS.gene34600:CDS | 50.0% |
| ! | TTTTGAGCTCCTGCGCCAAT+AGG | + | chr4.3:59489411-59489430 | MS.gene34600:intron | 50.0% |
| AAGTGAGCTACTCATCCCCG+GGG | + | chr4.3:59487914-59487933 | MS.gene34600:intron | 55.0% | |
| AATGGTTGAGTTACCCCCCC+GGG | - | chr4.3:59487933-59487952 | None:intergenic | 55.0% | |
| ACAGCGGTTCAACAGACTCG+GGG | - | chr4.3:59489181-59489200 | None:intergenic | 55.0% | |
| ACCTCACGGGTTTCTGTCGA+TGG | - | chr4.3:59486647-59486666 | None:intergenic | 55.0% | |
| ACGGTCTCGAGGATCGTTCA+TGG | - | chr4.3:59489600-59489619 | None:intergenic | 55.0% | |
| ACTAGGTGGGATCGGCTACA+TGG | - | chr4.3:59488074-59488093 | None:intergenic | 55.0% | |
| AGAGGGCCTGCAAGTTTCTC+TGG | - | chr4.3:59488668-59488687 | None:intergenic | 55.0% | |
| CAAGGGCAAGGGGATGATTC+AGG | + | chr4.3:59488787-59488806 | MS.gene34600:CDS | 55.0% | |
| CAAGTGAGCTACTCATCCCC+GGG | + | chr4.3:59487913-59487932 | MS.gene34600:intron | 55.0% | |
| CACTTGAGCCGCTAAAGCTC+AGG | - | chr4.3:59489113-59489132 | None:intergenic | 55.0% | |
| CCAAGTGAGCTACTCATCCC+CGG | + | chr4.3:59487912-59487931 | MS.gene34600:intron | 55.0% | |
| GAAACTTGCAGGCCCTCTCT+TGG | + | chr4.3:59488670-59488689 | MS.gene34600:CDS | 55.0% | |
| GATGGGACAAAGCTCGACAG+GGG | - | chr4.3:59488990-59489009 | None:intergenic | 55.0% | |
| GCTGACCAAGAAGAGATGGC+CGG | - | chr4.3:59489652-59489671 | None:intergenic | 55.0% | |
| GGCAGGCGCACTTTATAGTG+TGG | + | chr4.3:59487173-59487192 | MS.gene34600:CDS | 55.0% | |
| GGCGCAGGAGCTCAAAAGTT+AGG | - | chr4.3:59489408-59489427 | None:intergenic | 55.0% | |
| GGCTGCTGACCAAGAAGAGA+TGG | - | chr4.3:59489656-59489675 | None:intergenic | 55.0% | |
| GGTGACAGCATCAAGGGCAA+GGG | + | chr4.3:59488776-59488795 | MS.gene34600:CDS | 55.0% | |
| GTGACAGCATCAAGGGCAAG+GGG | + | chr4.3:59488777-59488796 | MS.gene34600:CDS | 55.0% | |
| TGTGTTGGAGGTGGTGCTTG+GGG | + | chr4.3:59486281-59486300 | MS.gene34600:CDS | 55.0% | |
| ! | CTGAATTGGTTCCTGAGCCG+CGG | + | chr4.3:59486744-59486763 | MS.gene34600:CDS | 55.0% |
| AGTGAGCTACTCATCCCCGG+GGG | + | chr4.3:59487915-59487934 | MS.gene34600:intron | 60.0% | |
| ATGGTTGAGTTACCCCCCCG+GGG | - | chr4.3:59487932-59487951 | None:intergenic | 60.0% | |
| CCGGGGATGAGTAGCTCACT+TGG | - | chr4.3:59487915-59487934 | None:intergenic | 60.0% | |
| CGAGGGAGGATGTGTTGAGG+AGG | + | chr4.3:59486435-59486454 | MS.gene34600:CDS | 60.0% | |
| CGGTTCAACAGACTCGGGGT+TGG | - | chr4.3:59489177-59489196 | None:intergenic | 60.0% | |
| GCCATCGACAGAAACCCGTG+AGG | + | chr4.3:59486643-59486662 | MS.gene34600:CDS | 60.0% | |
| GGGTGACAGCATCAAGGGCA+AGG | + | chr4.3:59488775-59488794 | MS.gene34600:CDS | 60.0% | |
| ! | GGTGTTATGATCCGCGGCTC+AGG | - | chr4.3:59486758-59486777 | None:intergenic | 60.0% |
| GTGAGCTACTCATCCCCGGG+GGG | + | chr4.3:59487916-59487935 | MS.gene34600:intron | 65.0% | |
| TGAGCTACTCATCCCCGGGG+GGG | + | chr4.3:59487917-59487936 | MS.gene34600:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 59486161 | 59489679 | 59486161 | ID=MS.gene34600 |
| chr4.3 | mRNA | 59486161 | 59489679 | 59486161 | ID=MS.gene34600.t1;Parent=MS.gene34600 |
| chr4.3 | exon | 59486161 | 59486800 | 59486161 | ID=MS.gene34600.t1.exon1;Parent=MS.gene34600.t1 |
| chr4.3 | CDS | 59486161 | 59486800 | 59486161 | ID=cds.MS.gene34600.t1;Parent=MS.gene34600.t1 |
| chr4.3 | exon | 59487041 | 59487262 | 59487041 | ID=MS.gene34600.t1.exon2;Parent=MS.gene34600.t1 |
| chr4.3 | CDS | 59487041 | 59487262 | 59487041 | ID=cds.MS.gene34600.t1;Parent=MS.gene34600.t1 |
| chr4.3 | exon | 59488561 | 59488808 | 59488561 | ID=MS.gene34600.t1.exon3;Parent=MS.gene34600.t1 |
| chr4.3 | CDS | 59488561 | 59488808 | 59488561 | ID=cds.MS.gene34600.t1;Parent=MS.gene34600.t1 |
| chr4.3 | exon | 59488902 | 59489041 | 59488902 | ID=MS.gene34600.t1.exon4;Parent=MS.gene34600.t1 |
| chr4.3 | CDS | 59488902 | 59489041 | 59488902 | ID=cds.MS.gene34600.t1;Parent=MS.gene34600.t1 |
| chr4.3 | exon | 59489553 | 59489679 | 59489553 | ID=MS.gene34600.t1.exon5;Parent=MS.gene34600.t1 |
| chr4.3 | CDS | 59489553 | 59489679 | 59489553 | ID=cds.MS.gene34600.t1;Parent=MS.gene34600.t1 |
| Gene Sequence |
| Protein sequence |
