Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050811.t1 | XP_003626112.1 | 98.3 | 420 | 7 | 0 | 1 | 420 | 1 | 420 | 6.40E-231 | 809.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050811.t1 | Q6ZMB5 | 40.8 | 336 | 169 | 4 | 20 | 325 | 66 | 401 | 2.2e-62 | 241.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050811.t1 | Q2HUZ5 | 98.3 | 420 | 7 | 0 | 1 | 420 | 1 | 420 | 4.6e-231 | 809.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050811 | MS.gene059303 | -0.813084 | 3.06E-51 | -1.69E-46 |
| MS.gene050811 | MS.gene059512 | -0.820666 | 6.08E-53 | -1.69E-46 |
| MS.gene050811 | MS.gene071517 | -0.828647 | 8.00E-55 | -1.69E-46 |
| MS.gene050811 | MS.gene071518 | -0.830498 | 2.84E-55 | -1.69E-46 |
| MS.gene050811 | MS.gene071519 | -0.831614 | 1.51E-55 | -1.69E-46 |
| MS.gene050811 | MS.gene072612 | 0.907144 | 6.96E-81 | -1.69E-46 |
| MS.gene050811 | MS.gene072880 | 0.825026 | 5.87E-54 | -1.69E-46 |
| MS.gene050811 | MS.gene072928 | 0.826148 | 3.18E-54 | -1.69E-46 |
| MS.gene050811 | MS.gene21480 | -0.815804 | 7.66E-52 | -1.69E-46 |
| MS.gene050811 | MS.gene24781 | -0.81046 | 1.14E-50 | -1.69E-46 |
| MS.gene050811 | MS.gene25265 | -0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene050811 | MS.gene25660 | -0.819152 | 1.35E-52 | -1.69E-46 |
| MS.gene050811 | MS.gene25663 | -0.806293 | 8.83E-50 | -1.69E-46 |
| MS.gene050811 | MS.gene32602 | 0.8309 | 2.26E-55 | -1.69E-46 |
| MS.gene050811 | MS.gene32646 | 0.811513 | 6.74E-51 | -1.69E-46 |
| MS.gene050811 | MS.gene34445 | 0.825628 | 4.23E-54 | -1.69E-46 |
| MS.gene050811 | MS.gene34600 | 0.820231 | 7.65E-53 | -1.69E-46 |
| MS.gene050811 | MS.gene35712 | -0.812304 | 4.53E-51 | -1.69E-46 |
| MS.gene050811 | MS.gene41384 | 0.81394 | 1.98E-51 | -1.69E-46 |
| MS.gene050811 | MS.gene49038 | 0.825118 | 5.58E-54 | -1.69E-46 |
| MS.gene050811 | MS.gene49436 | -0.808207 | 3.47E-50 | -1.69E-46 |
| MS.gene050811 | MS.gene49971 | -0.811676 | 6.22E-51 | -1.69E-46 |
| MS.gene050811 | MS.gene52292 | 0.807347 | 5.28E-50 | -1.69E-46 |
| MS.gene050811 | MS.gene56074 | -0.832627 | 8.49E-56 | -1.69E-46 |
| MS.gene050811 | MS.gene56402 | -0.826816 | 2.20E-54 | -1.69E-46 |
| MS.gene050811 | MS.gene56403 | -0.83547 | 1.65E-56 | -1.69E-46 |
| MS.gene050811 | MS.gene61774 | 0.80641 | 8.34E-50 | -1.69E-46 |
| MS.gene050811 | MS.gene62631 | 0.841167 | 5.60E-58 | -1.69E-46 |
| MS.gene050811 | MS.gene64394 | 0.829983 | 3.79E-55 | -1.69E-46 |
| MS.gene050811 | MS.gene66921 | 0.81572 | 8.00E-52 | -1.69E-46 |
| MS.gene050811 | MS.gene67341 | 0.800609 | 1.33E-48 | -1.69E-46 |
| MS.gene050811 | MS.gene77342 | 0.836874 | 7.25E-57 | -1.69E-46 |
| MS.gene050811 | MS.gene78428 | 0.82738 | 1.62E-54 | -1.69E-46 |
| MS.gene050811 | MS.gene82495 | 0.817733 | 2.83E-52 | -1.69E-46 |
| MS.gene050811 | MS.gene83325 | 0.855423 | 6.37E-62 | -1.69E-46 |
| MS.gene050811 | MS.gene89544 | 0.808381 | 3.18E-50 | -1.69E-46 |
| MS.gene050811 | MS.gene91401 | -0.82541 | 4.76E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072612 | MS.gene050811 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050811.t1 | MTR_7g111160 | 99.762 | 420 | 1 | 0 | 1 | 420 | 1 | 420 | 0.0 | 858 |
| MS.gene050811.t1 | MTR_3g090180 | 35.955 | 267 | 149 | 3 | 20 | 265 | 28 | 293 | 2.98e-43 | 157 |
| MS.gene050811.t1 | MTR_2g042580 | 34.409 | 279 | 162 | 4 | 20 | 279 | 31 | 307 | 4.46e-40 | 148 |
| MS.gene050811.t1 | MTR_3g118470 | 34.201 | 269 | 151 | 5 | 35 | 277 | 38 | 306 | 3.40e-36 | 139 |
| MS.gene050811.t1 | MTR_3g090180 | 34.632 | 231 | 129 | 3 | 56 | 265 | 9 | 238 | 1.12e-31 | 125 |
| MS.gene050811.t1 | MTR_3g090180 | 35.211 | 213 | 116 | 3 | 74 | 265 | 13 | 224 | 1.00e-29 | 119 |
| MS.gene050811.t1 | MTR_4g050765 | 29.670 | 273 | 168 | 5 | 15 | 271 | 18 | 282 | 5.31e-26 | 107 |
| MS.gene050811.t1 | MTR_2g012360 | 29.670 | 273 | 168 | 5 | 15 | 271 | 18 | 282 | 5.31e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050811.t1 | AT3G05940 | 77.566 | 419 | 93 | 1 | 1 | 418 | 1 | 419 | 0.0 | 671 |
| MS.gene050811.t1 | AT5G26740 | 75.592 | 422 | 101 | 2 | 1 | 420 | 1 | 422 | 0.0 | 637 |
| MS.gene050811.t1 | AT5G26740 | 75.592 | 422 | 101 | 2 | 1 | 420 | 1 | 422 | 0.0 | 637 |
| MS.gene050811.t1 | AT5G26740 | 75.592 | 422 | 101 | 2 | 1 | 420 | 1 | 422 | 0.0 | 637 |
| MS.gene050811.t1 | AT1G77220 | 36.431 | 269 | 152 | 3 | 20 | 269 | 53 | 321 | 9.06e-43 | 157 |
| MS.gene050811.t1 | AT4G38360 | 34.520 | 281 | 161 | 5 | 20 | 277 | 31 | 311 | 1.38e-41 | 153 |
| MS.gene050811.t1 | AT1G23070 | 35.018 | 277 | 150 | 5 | 15 | 269 | 23 | 291 | 2.69e-37 | 140 |
| MS.gene050811.t1 | AT1G77220 | 33.333 | 273 | 163 | 3 | 17 | 270 | 50 | 322 | 5.66e-37 | 138 |
| MS.gene050811.t1 | AT4G38360 | 32.812 | 256 | 151 | 3 | 18 | 252 | 29 | 284 | 4.33e-34 | 129 |
| MS.gene050811.t1 | AT4G21570 | 31.228 | 285 | 162 | 9 | 12 | 273 | 12 | 285 | 2.74e-29 | 116 |
| MS.gene050811.t1 | AT1G11200 | 29.749 | 279 | 174 | 5 | 15 | 278 | 19 | 290 | 8.75e-29 | 114 |
| MS.gene050811.t1 | AT4G21570 | 29.114 | 316 | 158 | 11 | 12 | 273 | 12 | 315 | 1.68e-23 | 100 |
Find 97 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTGTAACAACAACTAAAA+TGG | 0.171683 | 7.1:-4109403 | None:intergenic |
| TCTGCTGCAGGAACTTCTTC+TGG | 0.174386 | 7.1:-4111543 | None:intergenic |
| TTTCTCACATTATCCATCTC+TGG | 0.262507 | 7.1:-4111318 | None:intergenic |
| TTGCTTTCCTCCTATACCTT+TGG | 0.282986 | 7.1:+4109099 | MS.gene050811:CDS |
| CTGTTGTATTCCTTACTTAC+TGG | 0.302664 | 7.1:+4109610 | MS.gene050811:CDS |
| AGTAGTACTCCCTCAAATTC+TGG | 0.343585 | 7.1:+4111402 | MS.gene050811:CDS |
| CTAGCATGGGTTGGTGGTCC+TGG | 0.350385 | 7.1:+4109016 | MS.gene050811:CDS |
| GCTCCAGCATATTCTTTGTA+TGG | 0.352134 | 7.1:-4110987 | None:intergenic |
| TCCTGTCACTTTGTCTAGCA+TGG | 0.352706 | 7.1:+4109002 | MS.gene050811:CDS |
| CACCGTCGGTGCAATCGCTT+TGG | 0.369605 | 7.1:+4107463 | MS.gene050811:CDS |
| TTCTTTCTTGCTGCAAAGTC+GGG | 0.373340 | 7.1:+4110870 | MS.gene050811:CDS |
| ATATGGTATGGACGCAGAAT+TGG | 0.374420 | 7.1:-4111484 | None:intergenic |
| AGGAACTTCTTCTGGGTAAC+TGG | 0.377025 | 7.1:-4111535 | None:intergenic |
| ACTTTATGATAATAAACTTT+GGG | 0.378211 | 7.1:-4109587 | None:intergenic |
| CAGCAGATAAAGCCGGTCTT+AGG | 0.392911 | 7.1:+4111559 | MS.gene050811:CDS |
| CGTGGTTTGACCGCTAGCCT+TGG | 0.393123 | 7.1:+4111026 | MS.gene050811:CDS |
| TTCTCACATTATCCATCTCT+GGG | 0.397889 | 7.1:-4111317 | None:intergenic |
| TACAGATAACTTACACTTCA+CGG | 0.401405 | 7.1:-4108149 | None:intergenic |
| GACTTTATGATAATAAACTT+TGG | 0.402571 | 7.1:-4109588 | None:intergenic |
| TTGTTATAAGTTTGAGTGGT+CGG | 0.403312 | 7.1:+4109044 | MS.gene050811:CDS |
| GCATCAGAGTTTGAAGCATC+AGG | 0.427306 | 7.1:-4111432 | None:intergenic |
| CTGTTTCAGCTATGAAGCTT+GGG | 0.427514 | 7.1:+4108967 | MS.gene050811:intron |
| GTTCTTTCTTGCTGCAAAGT+CGG | 0.434663 | 7.1:+4110869 | MS.gene050811:CDS |
| ACTTACCCATCCAAAGGTAT+AGG | 0.437456 | 7.1:-4109109 | None:intergenic |
| AAATTACCTGCCAGTAAGTA+AGG | 0.437928 | 7.1:-4109620 | None:intergenic |
| CCTGTCACTTTGTCTAGCAT+GGG | 0.441185 | 7.1:+4109003 | MS.gene050811:CDS |
| GTGGTTTGACCGCTAGCCTT+GGG | 0.442097 | 7.1:+4111027 | MS.gene050811:CDS |
| AGTGTAACAACAACTAAAAT+GGG | 0.443292 | 7.1:-4109402 | None:intergenic |
| CTGCTGCAGGAACTTCTTCT+GGG | 0.444198 | 7.1:-4111542 | None:intergenic |
| TCAATAAGTGTCAAATCATA+TGG | 0.449032 | 7.1:-4111501 | None:intergenic |
| AGATACAAGTATGACTGCTT+TGG | 0.453832 | 7.1:-4109468 | None:intergenic |
| GAATATGCTGGAGCTAATAT+AGG | 0.458813 | 7.1:+4110996 | MS.gene050811:CDS |
| TTTCCTCCTATACCTTTGGA+TGG | 0.458821 | 7.1:+4109103 | MS.gene050811:CDS |
| ACTGTTTCAGCTATGAAGCT+TGG | 0.464786 | 7.1:+4108966 | MS.gene050811:intron |
| TTCTTTACAACCACAGTGAA+GGG | 0.466359 | 7.1:+4111247 | MS.gene050811:CDS |
| TGTTATAAGTTTGAGTGGTC+GGG | 0.467257 | 7.1:+4109045 | MS.gene050811:CDS |
| CTTTGTCTAGCATGGGTTGG+TGG | 0.473508 | 7.1:+4109010 | MS.gene050811:CDS |
| ACACTTATTCTTTACGCTAA+GGG | 0.475471 | 7.1:+4109420 | MS.gene050811:CDS |
| AACTTTGGGACTGGATTGAA+TGG | 0.476786 | 7.1:-4109573 | None:intergenic |
| TGATTTGACACTTATTGACT+TGG | 0.478189 | 7.1:+4111506 | MS.gene050811:CDS |
| TACACTTATTCTTTACGCTA+AGG | 0.478364 | 7.1:+4109419 | MS.gene050811:CDS |
| ATGATAATAAACTTTGGGAC+TGG | 0.490038 | 7.1:-4109582 | None:intergenic |
| AAGTGTCAAATCATATGGTA+TGG | 0.493986 | 7.1:-4111496 | None:intergenic |
| TTATCCATCTCTGGGCCAAT+CGG | 0.496708 | 7.1:-4111309 | None:intergenic |
| AAGCAGCTTCGTCAGCATCC+TGG | 0.498366 | 7.1:-4110899 | None:intergenic |
| TAGGTTCAGTATAATTAAGA+AGG | 0.501333 | 7.1:-4107508 | None:intergenic |
| TTCCTCCTATACCTTTGGAT+GGG | 0.504704 | 7.1:+4109104 | MS.gene050811:CDS |
| AAACTTATAACAACTGATCC+AGG | 0.504735 | 7.1:-4109034 | None:intergenic |
| TCACGAACGTTTGTTCCGAT+TGG | 0.505852 | 7.1:+4111294 | MS.gene050811:CDS |
| TGTATTCCTTACTTACTGGC+AGG | 0.506772 | 7.1:+4109614 | MS.gene050811:CDS |
| AGGCAGTGAACCAGAATTTG+AGG | 0.509018 | 7.1:-4111412 | None:intergenic |
| TCACTTTGTCTAGCATGGGT+TGG | 0.514179 | 7.1:+4109007 | MS.gene050811:CDS |
| TGCAAAGTCGGGATTCATCC+AGG | 0.517372 | 7.1:+4110881 | MS.gene050811:CDS |
| CACTTATTCTTTACGCTAAG+GGG | 0.518846 | 7.1:+4109421 | MS.gene050811:CDS |
| AACCACAGTGAAGGGGAAGA+AGG | 0.518899 | 7.1:+4111255 | MS.gene050811:CDS |
| ACAATGAAGCGTTGATAAGT+AGG | 0.519462 | 7.1:-4107527 | None:intergenic |
| TTGAAAGCCGCGGTAAAACA+AGG | 0.520223 | 7.1:-4108110 | None:intergenic |
| TTTCCATACAAAGAATATGC+TGG | 0.525305 | 7.1:+4110984 | MS.gene050811:CDS |
| AGACCGGCTTTATCTGCTGC+AGG | 0.526348 | 7.1:-4111555 | None:intergenic |
| TTCATACGTAAGTGCAAGCA+AGG | 0.532037 | 7.1:+4109354 | MS.gene050811:CDS |
| TTACGCTAAGGGGAAATACA+AGG | 0.532724 | 7.1:+4109431 | MS.gene050811:CDS |
| AAGAAGGAACAAGGAAGTAC+AGG | 0.535851 | 7.1:+4111271 | MS.gene050811:CDS |
| AAGGCTAGCGGTCAAACCAC+GGG | 0.540121 | 7.1:-4111024 | None:intergenic |
| AGCCAAAGCGATTGCACCGA+CGG | 0.545111 | 7.1:-4107465 | None:intergenic |
| CCTTATCGATCACCTAAGAC+CGG | 0.547244 | 7.1:-4111571 | None:intergenic |
| TGTATGGAAATGCATAAAAG+TGG | 0.547274 | 7.1:-4110971 | None:intergenic |
| GGCAGTGAACCAGAATTTGA+GGG | 0.549362 | 7.1:-4111411 | None:intergenic |
| TCACCTGGTGGACTGTATCA+TGG | 0.557444 | 7.1:-4111076 | None:intergenic |
| AATCAAATCTTCCTTGCTTG+TGG | 0.562585 | 7.1:+4111455 | MS.gene050811:CDS |
| GTTCTTTACAACCACAGTGA+AGG | 0.564984 | 7.1:+4111246 | MS.gene050811:CDS |
| CAAGGCTAGCGGTCAAACCA+CGG | 0.567441 | 7.1:-4111025 | None:intergenic |
| TACCCATCCAAAGGTATAGG+AGG | 0.567651 | 7.1:-4109106 | None:intergenic |
| TGTTCCGATTGGCCCAGAGA+TGG | 0.569333 | 7.1:+4111305 | MS.gene050811:CDS |
| CTAAGGGGAAATACAAGGAT+GGG | 0.571154 | 7.1:+4109436 | MS.gene050811:CDS |
| TCAGTTGTTATAAGTTTGAG+TGG | 0.572193 | 7.1:+4109040 | MS.gene050811:CDS |
| TGAGATGCTTATTGCTGCAG+TGG | 0.573649 | 7.1:+4110947 | MS.gene050811:CDS |
| GTTCCTGCAGCAGATAAAGC+CGG | 0.587118 | 7.1:+4111552 | MS.gene050811:CDS |
| GCTAAGGGGAAATACAAGGA+TGG | 0.587400 | 7.1:+4109435 | MS.gene050811:CDS |
| CCCATGCTAGACAAAGTGAC+AGG | 0.598216 | 7.1:-4109003 | None:intergenic |
| GAGATGCTTATTGCTGCAGT+GGG | 0.611426 | 7.1:+4110948 | MS.gene050811:CDS |
| CTATACATTCTCATATACAA+TGG | 0.615648 | 7.1:+4109500 | MS.gene050811:CDS |
| GTGAAGGGGAAGAAGGAACA+AGG | 0.618383 | 7.1:+4111262 | MS.gene050811:CDS |
| TATGCTGGAGCTAATATAGG+TGG | 0.621058 | 7.1:+4110999 | MS.gene050811:CDS |
| ATTGGACACATCCACAAGCA+AGG | 0.624740 | 7.1:-4111466 | None:intergenic |
| AGAACATAATCATGATACGT+TGG | 0.630961 | 7.1:-4111228 | None:intergenic |
| CAAAGCATGCCCAAGGCTAG+CGG | 0.631165 | 7.1:-4111036 | None:intergenic |
| TTCCTTCTTCCCCTTCACTG+TGG | 0.632503 | 7.1:-4111257 | None:intergenic |
| TTACCATGATACAGTCCACC+AGG | 0.635265 | 7.1:+4111073 | MS.gene050811:CDS |
| ATGCAAACTTACCCATCCAA+AGG | 0.637240 | 7.1:-4109115 | None:intergenic |
| TCTTTACAACCACAGTGAAG+GGG | 0.644033 | 7.1:+4111248 | MS.gene050811:CDS |
| TAAGCATATAACTGGAAACA+AGG | 0.644662 | 7.1:+4111344 | MS.gene050811:CDS |
| TCAACTTCAAAGCATGCCCA+AGG | 0.650573 | 7.1:-4111043 | None:intergenic |
| TGAAAGCCGCGGTAAAACAA+GGG | 0.670598 | 7.1:-4108109 | None:intergenic |
| CAAGTCATCAGACAGACTGA+CGG | 0.684226 | 7.1:-4109076 | None:intergenic |
| TTAAAGTAGATTGAAAGCCG+CGG | 0.686396 | 7.1:-4108120 | None:intergenic |
| TCATACGTAAGTGCAAGCAA+GGG | 0.690075 | 7.1:+4109355 | MS.gene050811:CDS |
| GCTAATATAGGTGGATCCCG+TGG | 0.715148 | 7.1:+4111008 | MS.gene050811:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAGTAAAAAAAAAAAAAA+AGG | - | chr7.1:4110337-4110356 | None:intergenic | 10.0% |
| !! | TTAATTATAATTTCAAATTC+AGG | - | chr7.1:4108892-4108911 | None:intergenic | 10.0% |
| !!! | TTTTTAAAAAAAACTTTAAG+AGG | + | chr7.1:4109255-4109274 | MS.gene050811:intron | 10.0% |
| !! | AATGTTAAAATAGTAAATGA+AGG | - | chr7.1:4108635-4108654 | None:intergenic | 15.0% |
| !! | ACTTTATGATAATAAACTTT+GGG | - | chr7.1:4109590-4109609 | None:intergenic | 15.0% |
| !! | ATATCTAAAAAATTGTCATT+GGG | + | chr7.1:4108513-4108532 | MS.gene050811:intron | 15.0% |
| !! | ATGTTAAAATAGTAAATGAA+GGG | - | chr7.1:4108634-4108653 | None:intergenic | 15.0% |
| !! | TATATCTAAAAAATTGTCAT+TGG | + | chr7.1:4108512-4108531 | MS.gene050811:intron | 15.0% |
| !!! | ATGTTTATTTTTCTAATGAT+AGG | + | chr7.1:4108538-4108557 | MS.gene050811:intron | 15.0% |
| !!! | TCAAATTAATTTTTTGAAGA+TGG | + | chr7.1:4110743-4110762 | MS.gene050811:intron | 15.0% |
| !!! | TTATACATCTTTCATTTTTA+TGG | + | chr7.1:4109643-4109662 | MS.gene050811:intron | 15.0% |
| !!! | TTTTTGTTTTTCATTTCTTA+GGG | + | chr7.1:4110840-4110859 | MS.gene050811:intron | 15.0% |
| !!! | TTTTTTGTTTTTCATTTCTT+AGG | + | chr7.1:4110839-4110858 | MS.gene050811:intron | 15.0% |
| !! | AGAAAAAATAAGCATATAAC+TGG | + | chr7.1:4111336-4111355 | MS.gene050811:CDS | 20.0% |
| !! | ATATAGAAAGTTGTAAATTG+TGG | + | chr7.1:4107847-4107866 | MS.gene050811:intron | 20.0% |
| !! | ATTATTTATTTGCATGCAAA+AGG | + | chr7.1:4110696-4110715 | MS.gene050811:intron | 20.0% |
| !! | GACTTTATGATAATAAACTT+TGG | - | chr7.1:4109591-4109610 | None:intergenic | 20.0% |
| !! | TATCTAAAAAATTGTCATTG+GGG | + | chr7.1:4108514-4108533 | MS.gene050811:intron | 20.0% |
| !! | TATGGTCATAGTAATAAAAA+AGG | + | chr7.1:4110641-4110660 | MS.gene050811:intron | 20.0% |
| !! | TGAGAATAACATTATAAGAT+GGG | - | chr7.1:4110075-4110094 | None:intergenic | 20.0% |
| !! | TGTTAAAATAGTAAATGAAG+GGG | - | chr7.1:4108633-4108652 | None:intergenic | 20.0% |
| !! | TTGAGAATAACATTATAAGA+TGG | - | chr7.1:4110076-4110095 | None:intergenic | 20.0% |
| !!! | AAATTCTAAGCTTGTTTATA+TGG | + | chr7.1:4110623-4110642 | MS.gene050811:intron | 20.0% |
| !!! | TGTTTTATGTTACCATAAAA+AGG | + | chr7.1:4109757-4109776 | MS.gene050811:intron | 20.0% |
| !!! | TTTTGTTTTTCATTTCTTAG+GGG | + | chr7.1:4110841-4110860 | MS.gene050811:intron | 20.0% |
| ! | AAACCTTGAGAAATAGAAAA+CGG | - | chr7.1:4110586-4110605 | None:intergenic | 25.0% |
| ! | AACCAAATAGGTAAAACAAT+GGG | - | chr7.1:4107902-4107921 | None:intergenic | 25.0% |
| ! | AAGTGTAACAACAACTAAAA+TGG | - | chr7.1:4109406-4109425 | None:intergenic | 25.0% |
| ! | AATCAATTATGGAGTAAAGA+TGG | - | chr7.1:4110470-4110489 | None:intergenic | 25.0% |
| ! | ACACAAGGAACTATAAAATA+TGG | - | chr7.1:4111132-4111151 | None:intergenic | 25.0% |
| ! | AGTAGTATCAGGTTATTAAT+TGG | - | chr7.1:4111188-4111207 | None:intergenic | 25.0% |
| ! | AGTGTAACAACAACTAAAAT+GGG | - | chr7.1:4109405-4109424 | None:intergenic | 25.0% |
| ! | CATCTATGAAACAAATTCAA+AGG | - | chr7.1:4109208-4109227 | None:intergenic | 25.0% |
| ! | CTATACATTCTCATATACAA+TGG | + | chr7.1:4109500-4109519 | MS.gene050811:CDS | 25.0% |
| ! | GAAAATGAAGAAGAAATCAA+AGG | - | chr7.1:4107950-4107969 | None:intergenic | 25.0% |
| ! | GTTAAAATAGTAAATGAAGG+GGG | - | chr7.1:4108632-4108651 | None:intergenic | 25.0% |
| ! | TAACCAATAAGCTAACATAT+AGG | - | chr7.1:4110775-4110794 | None:intergenic | 25.0% |
| ! | TACATAAACAAAGAAAAACG+TGG | - | chr7.1:4107615-4107634 | None:intergenic | 25.0% |
| ! | TAGGTTCAGTATAATTAAGA+AGG | - | chr7.1:4107511-4107530 | None:intergenic | 25.0% |
| ! | TCAATAAGTGTCAAATCATA+TGG | - | chr7.1:4111504-4111523 | None:intergenic | 25.0% |
| ! | TCTTTACTCCATAATTGATT+TGG | + | chr7.1:4110470-4110489 | MS.gene050811:intron | 25.0% |
| ! | TTAAAATAGTAAATGAAGGG+GGG | - | chr7.1:4108631-4108650 | None:intergenic | 25.0% |
| ! | TTTGTTAATTGCTTTGTAGT+GGG | + | chr7.1:4110719-4110738 | MS.gene050811:intron | 25.0% |
| !! | AAAAAAAACTTTAAGAGGCT+AGG | + | chr7.1:4109260-4109279 | MS.gene050811:intron | 25.0% |
| !! | ACAACATCATGATTGATTTA+AGG | + | chr7.1:4108346-4108365 | MS.gene050811:intron | 25.0% |
| !! | ACATTATAAGATGGGATTTT+TGG | - | chr7.1:4110067-4110086 | None:intergenic | 25.0% |
| !! | AGGTATATATAACCATTTTC+AGG | - | chr7.1:4109174-4109193 | None:intergenic | 25.0% |
| !! | CTATGCTTTTCTCATATTTT+CGG | + | chr7.1:4109667-4109686 | MS.gene050811:intron | 25.0% |
| !! | TCATTGGTGTATTTGTTAAT+TGG | + | chr7.1:4107656-4107675 | MS.gene050811:intron | 25.0% |
| !! | TGTTTTTCACTTAGTTGAAA+GGG | + | chr7.1:4107764-4107783 | MS.gene050811:intron | 25.0% |
| !! | TTGCATCTGATTCATATTTT+TGG | + | chr7.1:4109132-4109151 | MS.gene050811:intron | 25.0% |
| !! | TTTGTATTTTCTTTTGCTAG+AGG | + | chr7.1:4108665-4108684 | MS.gene050811:intron | 25.0% |
| !!! | AAACTTTAATTTTCTCTGAC+AGG | + | chr7.1:4108062-4108081 | MS.gene050811:intron | 25.0% |
| !!! | ACTGTTTTTTCTTATACACA+AGG | + | chr7.1:4110355-4110374 | MS.gene050811:intron | 25.0% |
| !!! | CTGTTTTTTCTTATACACAA+GGG | + | chr7.1:4110356-4110375 | MS.gene050811:intron | 25.0% |
| !!! | TTGTTTTTCACTTAGTTGAA+AGG | + | chr7.1:4107763-4107782 | MS.gene050811:intron | 25.0% |
| !!! | TTTGTTTTTCATTTCTTAGG+GGG | + | chr7.1:4110842-4110861 | MS.gene050811:intron | 25.0% |
| AAACAGTTGAGAAGAGAAAA+TGG | - | chr7.1:4108953-4108972 | None:intergenic | 30.0% | |
| AAACTTATAACAACTGATCC+AGG | - | chr7.1:4109037-4109056 | None:intergenic | 30.0% | |
| AAAGGAAGTTGACATTCATA+TGG | + | chr7.1:4110659-4110678 | MS.gene050811:intron | 30.0% | |
| AAAGTGTATTTCCATACAGT+GGG | - | chr7.1:4109299-4109318 | None:intergenic | 30.0% | |
| AACCTTGAGAAATAGAAAAC+GGG | - | chr7.1:4110585-4110604 | None:intergenic | 30.0% | |
| AAGAAGAGAAATTAACTGAC+CGG | - | chr7.1:4107572-4107591 | None:intergenic | 30.0% | |
| AAGCTTGAATGTTGAAAAGA+CGG | - | chr7.1:4110041-4110060 | None:intergenic | 30.0% | |
| AAGTGCTCTTGAAAATCTAA+TGG | + | chr7.1:4107972-4107991 | MS.gene050811:intron | 30.0% | |
| AAGTGTCAAATCATATGGTA+TGG | - | chr7.1:4111499-4111518 | None:intergenic | 30.0% | |
| ACACTTATTCTTTACGCTAA+GGG | + | chr7.1:4109420-4109439 | MS.gene050811:CDS | 30.0% | |
| ACTTCATCGTATACATATCA+AGG | - | chr7.1:4108401-4108420 | None:intergenic | 30.0% | |
| AGAACATAATCATGATACGT+TGG | - | chr7.1:4111231-4111250 | None:intergenic | 30.0% | |
| AGAATAACCAATGAACTAGA+AGG | - | chr7.1:4108486-4108505 | None:intergenic | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | + | chr7.1:4108723-4108742 | MS.gene050811:intron | 30.0% | |
| AGCTATGTATGATATATCAC+TGG | - | chr7.1:4108306-4108325 | None:intergenic | 30.0% | |
| AGGTAAGTTAAAAACGTAGT+TGG | - | chr7.1:4110562-4110581 | None:intergenic | 30.0% | |
| AGTGCTCTTGAAAATCTAAT+GGG | + | chr7.1:4107973-4107992 | MS.gene050811:intron | 30.0% | |
| ATACGATGAAGTCTCTATTA+TGG | + | chr7.1:4108409-4108428 | MS.gene050811:intron | 30.0% | |
| ATTCATTGCACGTTATTGTT+AGG | + | chr7.1:4109921-4109940 | MS.gene050811:intron | 30.0% | |
| ATTCTAACACTACTTGGATA+AGG | - | chr7.1:4109903-4109922 | None:intergenic | 30.0% | |
| ATTTCAACAGTGACACATTT+AGG | - | chr7.1:4107728-4107747 | None:intergenic | 30.0% | |
| CAATGAATTCTAACACTACT+TGG | - | chr7.1:4109909-4109928 | None:intergenic | 30.0% | |
| CAGGGAGGAAAAAAAATATA+CGG | - | chr7.1:4108235-4108254 | None:intergenic | 30.0% | |
| CTAAATAACAGCAACAACAA+AGG | - | chr7.1:4108198-4108217 | None:intergenic | 30.0% | |
| CTTCATCGTATACATATCAA+GGG | - | chr7.1:4108400-4108419 | None:intergenic | 30.0% | |
| GAACCAAATAGGTAAAACAA+TGG | - | chr7.1:4107903-4107922 | None:intergenic | 30.0% | |
| GCGATAACATAGAAAAAAAG+CGG | - | chr7.1:4107434-4107453 | None:intergenic | 30.0% | |
| GGAAGAAGAAGAAAAAACAA+AGG | - | chr7.1:4111167-4111186 | None:intergenic | 30.0% | |
| GGATAATCAAACAACACAAA+TGG | - | chr7.1:4110449-4110468 | None:intergenic | 30.0% | |
| GTTGGATCAAAATATGACTA+TGG | + | chr7.1:4108741-4108760 | MS.gene050811:intron | 30.0% | |
| TAAGCATATAACTGGAAACA+AGG | + | chr7.1:4111344-4111363 | MS.gene050811:CDS | 30.0% | |
| TACACTTATTCTTTACGCTA+AGG | + | chr7.1:4109419-4109438 | MS.gene050811:CDS | 30.0% | |
| TACAGATAACTTACACTTCA+CGG | - | chr7.1:4108152-4108171 | None:intergenic | 30.0% | |
| TATGTATTGTATTCCCTACT+AGG | + | chr7.1:4107629-4107648 | MS.gene050811:intron | 30.0% | |
| TCAGTTGTTATAAGTTTGAG+TGG | + | chr7.1:4109040-4109059 | MS.gene050811:CDS | 30.0% | |
| TGATGACTTTCACAAACAAA+AGG | - | chr7.1:4110538-4110557 | None:intergenic | 30.0% | |
| TGTATGGAAATGCATAAAAG+TGG | - | chr7.1:4110974-4110993 | None:intergenic | 30.0% | |
| TTCTAACACTACTTGGATAA+GGG | - | chr7.1:4109902-4109921 | None:intergenic | 30.0% | |
| TTGGATGACCAAATCAATTA+TGG | - | chr7.1:4110481-4110500 | None:intergenic | 30.0% | |
| TTGTTATAAGTTTGAGTGGT+CGG | + | chr7.1:4109044-4109063 | MS.gene050811:CDS | 30.0% | |
| TTTCAACAGTGACACATTTA+GGG | - | chr7.1:4107727-4107746 | None:intergenic | 30.0% | |
| TTTCCATACAAAGAATATGC+TGG | + | chr7.1:4110984-4111003 | MS.gene050811:CDS | 30.0% | |
| ! | AAAAGTGTATTTCCATACAG+TGG | - | chr7.1:4109300-4109319 | None:intergenic | 30.0% |
| ! | CATGATTGATTTAAGGTTCT+AGG | + | chr7.1:4108353-4108372 | MS.gene050811:intron | 30.0% |
| ! | CTAGTTCATTGGTTATTCTT+TGG | + | chr7.1:4108487-4108506 | MS.gene050811:intron | 30.0% |
| ! | GTTTGTTAATTGCTTTGTAG+TGG | + | chr7.1:4110718-4110737 | MS.gene050811:intron | 30.0% |
| ! | TAGCCTATATGTTAGCTTAT+TGG | + | chr7.1:4110769-4110788 | MS.gene050811:intron | 30.0% |
| ! | TGACATCAAGATCCTTTTTA+TGG | - | chr7.1:4109772-4109791 | None:intergenic | 30.0% |
| ! | TGATTTGACACTTATTGACT+TGG | + | chr7.1:4111506-4111525 | MS.gene050811:CDS | 30.0% |
| ! | TTATTCTCAAGTTGCTATCA+GGG | + | chr7.1:4110086-4110105 | MS.gene050811:intron | 30.0% |
| ! | TTTTCTCTGTATGCTAAACT+TGG | - | chr7.1:4110500-4110519 | None:intergenic | 30.0% |
| !! | AACTTGTTGGTTGTGATTAA+GGG | + | chr7.1:4108266-4108285 | MS.gene050811:intron | 30.0% |
| !! | AAGATGATCAGTAACTTGTT+TGG | + | chr7.1:4109837-4109856 | MS.gene050811:intron | 30.0% |
| !! | ACCTCTAAAACTTCTATTGT+AGG | + | chr7.1:4109328-4109347 | MS.gene050811:intron | 30.0% |
| !! | ATCAGTAACTTGTTTGGATT+CGG | + | chr7.1:4109843-4109862 | MS.gene050811:intron | 30.0% |
| !! | ATGATAATAAACTTTGGGAC+TGG | - | chr7.1:4109585-4109604 | None:intergenic | 30.0% |
| !! | TACCCATTGTTTTACCTATT+TGG | + | chr7.1:4107897-4107916 | MS.gene050811:intron | 30.0% |
| !!! | GCATTTGCTTTTTACACTAA+AGG | + | chr7.1:4110801-4110820 | MS.gene050811:intron | 30.0% |
| AAAATAGATGTAGTGTGTGC+TGG | - | chr7.1:4110233-4110252 | None:intergenic | 35.0% | |
| AAAGTTGTCATGCCTGAAAA+TGG | + | chr7.1:4109159-4109178 | MS.gene050811:intron | 35.0% | |
| AAATTACCTGCCAGTAAGTA+AGG | - | chr7.1:4109623-4109642 | None:intergenic | 35.0% | |
| AATCAAATCTTCCTTGCTTG+TGG | + | chr7.1:4111455-4111474 | MS.gene050811:CDS | 35.0% | |
| ACACCAATGAAAAACCTAGT+AGG | - | chr7.1:4107646-4107665 | None:intergenic | 35.0% | |
| ACCAAATAGAAAGAACTACG+AGG | - | chr7.1:4110275-4110294 | None:intergenic | 35.0% | |
| ACGTGGATAACAAACATTGA+AGG | - | chr7.1:4107598-4107617 | None:intergenic | 35.0% | |
| AGATACAAGTATGACTGCTT+TGG | - | chr7.1:4109471-4109490 | None:intergenic | 35.0% | |
| ATGGAAGTGAAAATGAGAAG+TGG | - | chr7.1:4110123-4110142 | None:intergenic | 35.0% | |
| CACAAACAAAAGGATCATCA+AGG | - | chr7.1:4110528-4110547 | None:intergenic | 35.0% | |
| CACCAATGAAAAACCTAGTA+GGG | - | chr7.1:4107645-4107664 | None:intergenic | 35.0% | |
| CACTTATTCTTTACGCTAAG+GGG | + | chr7.1:4109421-4109440 | MS.gene050811:CDS | 35.0% | |
| CCACAAATTTGAGTAGTATC+AGG | - | chr7.1:4111199-4111218 | None:intergenic | 35.0% | |
| CCTGATACTACTCAAATTTG+TGG | + | chr7.1:4111196-4111215 | MS.gene050811:intron | 35.0% | |
| CTGTTGTATTCCTTACTTAC+TGG | + | chr7.1:4109610-4109629 | MS.gene050811:CDS | 35.0% | |
| GAATATGCTGGAGCTAATAT+AGG | + | chr7.1:4110996-4111015 | MS.gene050811:CDS | 35.0% | |
| GTCATTGAAAGATTCAGAGT+TGG | - | chr7.1:4110315-4110334 | None:intergenic | 35.0% | |
| GTTCCTTGTGTTGAAATTTC+TGG | + | chr7.1:4111141-4111160 | MS.gene050811:intron | 35.0% | |
| TATTGTGATGCTAGATGAAC+AGG | + | chr7.1:4109709-4109728 | MS.gene050811:intron | 35.0% | |
| TCCTCGTAGTTCTTTCTATT+TGG | + | chr7.1:4110271-4110290 | MS.gene050811:intron | 35.0% | |
| TGCACGTTATTGTTAGGAAT+TGG | + | chr7.1:4109927-4109946 | MS.gene050811:intron | 35.0% | |
| TGGAAGTGAAAATGAGAAGT+GGG | - | chr7.1:4110122-4110141 | None:intergenic | 35.0% | |
| TGTTATAAGTTTGAGTGGTC+GGG | + | chr7.1:4109045-4109064 | MS.gene050811:CDS | 35.0% | |
| TGTTTCATGGTTCAACTTGT+TGG | + | chr7.1:4108253-4108272 | MS.gene050811:intron | 35.0% | |
| TTAAAGTAGATTGAAAGCCG+CGG | - | chr7.1:4108123-4108142 | None:intergenic | 35.0% | |
| TTCTCACATTATCCATCTCT+GGG | - | chr7.1:4111320-4111339 | None:intergenic | 35.0% | |
| TTCTTTACAACCACAGTGAA+GGG | + | chr7.1:4111247-4111266 | MS.gene050811:CDS | 35.0% | |
| TTTCTCACATTATCCATCTC+TGG | - | chr7.1:4111321-4111340 | None:intergenic | 35.0% | |
| ! | AACAAGTTGAACCATGAAAC+AGG | - | chr7.1:4108254-4108273 | None:intergenic | 35.0% |
| ! | ACAAGTTGAACCATGAAACA+GGG | - | chr7.1:4108253-4108272 | None:intergenic | 35.0% |
| ! | AGCACACACTACATCTATTT+TGG | + | chr7.1:4110232-4110251 | MS.gene050811:intron | 35.0% |
| ! | GTTATTCTCAAGTTGCTATC+AGG | + | chr7.1:4110085-4110104 | MS.gene050811:intron | 35.0% |
| ! | TTCCCTACTAGGTTTTTCAT+TGG | + | chr7.1:4107640-4107659 | MS.gene050811:intron | 35.0% |
| ! | TTTTCTTTTGCTAGAGGTAG+AGG | + | chr7.1:4108671-4108690 | MS.gene050811:intron | 35.0% |
| !! | ACAATGAAGCGTTGATAAGT+AGG | - | chr7.1:4107530-4107549 | None:intergenic | 35.0% |
| !! | ATCTAGTCCTTCTAGTTCAT+TGG | + | chr7.1:4108476-4108495 | MS.gene050811:intron | 35.0% |
| !! | CAACTTGTTGGTTGTGATTA+AGG | + | chr7.1:4108265-4108284 | MS.gene050811:intron | 35.0% |
| !! | GCCTACAATAGAAGTTTTAG+AGG | - | chr7.1:4109332-4109351 | None:intergenic | 35.0% |
| !!! | TTTTTTTCCTCCCTGTTTCA+TGG | + | chr7.1:4108240-4108259 | MS.gene050811:intron | 35.0% |
| AAGAACTACGAGGAATGAGA+AGG | - | chr7.1:4110265-4110284 | None:intergenic | 40.0% | |
| AATGGGTAATTCAGTCAGTG+AGG | - | chr7.1:4107885-4107904 | None:intergenic | 40.0% | |
| ACTGTTTCAGCTATGAAGCT+TGG | + | chr7.1:4108966-4108985 | MS.gene050811:intron | 40.0% | |
| AGGACAGTCAACAATTGTCA+GGG | - | chr7.1:4108872-4108891 | None:intergenic | 40.0% | |
| AGGACCTAATAAGAGACTGT+TGG | - | chr7.1:4107930-4107949 | None:intergenic | 40.0% | |
| AGGCCAGAAATTTCAACACA+AGG | - | chr7.1:4111147-4111166 | None:intergenic | 40.0% | |
| AGTTGAAAGGGTTTCGAACT+TGG | + | chr7.1:4107776-4107795 | MS.gene050811:intron | 40.0% | |
| ATATGGTATGGACGCAGAAT+TGG | - | chr7.1:4111487-4111506 | None:intergenic | 40.0% | |
| ATGCAAACTTACCCATCCAA+AGG | - | chr7.1:4109118-4109137 | None:intergenic | 40.0% | |
| ATTCAAAGGCTCAGATCTCA+AGG | - | chr7.1:4109194-4109213 | None:intergenic | 40.0% | |
| CACTTCTTATCCTACGAACA+TGG | - | chr7.1:4108455-4108474 | None:intergenic | 40.0% | |
| CATATAAAGTGAGACTCACC+TGG | - | chr7.1:4111094-4111113 | None:intergenic | 40.0% | |
| CGAACTTGGAAGGTCAAAAT+GGG | + | chr7.1:4107790-4107809 | MS.gene050811:intron | 40.0% | |
| CTAAGGGGAAATACAAGGAT+GGG | + | chr7.1:4109436-4109455 | MS.gene050811:CDS | 40.0% | |
| CTGTTTCAGCTATGAAGCTT+GGG | + | chr7.1:4108967-4108986 | MS.gene050811:intron | 40.0% | |
| CTTGAGAAATAGAAAACGGG+AGG | - | chr7.1:4110582-4110601 | None:intergenic | 40.0% | |
| GAACTTGGAAGGTCAAAATG+GGG | + | chr7.1:4107791-4107810 | MS.gene050811:intron | 40.0% | |
| GCTCCAGCATATTCTTTGTA+TGG | - | chr7.1:4110990-4111009 | None:intergenic | 40.0% | |
| GTCAGGGTGAACTTAGATTA+CGG | - | chr7.1:4108856-4108875 | None:intergenic | 40.0% | |
| GTTCTTTACAACCACAGTGA+AGG | + | chr7.1:4111246-4111265 | MS.gene050811:CDS | 40.0% | |
| GTTCTTTCTTGCTGCAAAGT+CGG | + | chr7.1:4110869-4110888 | MS.gene050811:CDS | 40.0% | |
| TAGATAGAGTCCATGTTCGT+AGG | + | chr7.1:4108442-4108461 | MS.gene050811:intron | 40.0% | |
| TATGCTGGAGCTAATATAGG+TGG | + | chr7.1:4110999-4111018 | MS.gene050811:CDS | 40.0% | |
| TCAAACAACACAAATGGTGC+AGG | - | chr7.1:4110443-4110462 | None:intergenic | 40.0% | |
| TCATACGTAAGTGCAAGCAA+GGG | + | chr7.1:4109355-4109374 | MS.gene050811:CDS | 40.0% | |
| TCGAACTTGGAAGGTCAAAA+TGG | + | chr7.1:4107789-4107808 | MS.gene050811:intron | 40.0% | |
| TCTTTACAACCACAGTGAAG+GGG | + | chr7.1:4111248-4111267 | MS.gene050811:CDS | 40.0% | |
| TGCACCAACAGTCTCTTATT+AGG | + | chr7.1:4107923-4107942 | MS.gene050811:intron | 40.0% | |
| TGTATTCCTTACTTACTGGC+AGG | + | chr7.1:4109614-4109633 | MS.gene050811:CDS | 40.0% | |
| TTACGCTAAGGGGAAATACA+AGG | + | chr7.1:4109431-4109450 | MS.gene050811:CDS | 40.0% | |
| TTCATACGTAAGTGCAAGCA+AGG | + | chr7.1:4109354-4109373 | MS.gene050811:CDS | 40.0% | |
| TTCCTCCTATACCTTTGGAT+GGG | + | chr7.1:4109104-4109123 | MS.gene050811:CDS | 40.0% | |
| TTCTTTCTTGCTGCAAAGTC+GGG | + | chr7.1:4110870-4110889 | MS.gene050811:CDS | 40.0% | |
| TTGCTTTCCTCCTATACCTT+TGG | + | chr7.1:4109099-4109118 | MS.gene050811:CDS | 40.0% | |
| TTGTATAGTTTAGCCCGTCA+AGG | + | chr7.1:4110142-4110161 | MS.gene050811:intron | 40.0% | |
| TTTCCTCCTATACCTTTGGA+TGG | + | chr7.1:4109103-4109122 | MS.gene050811:CDS | 40.0% | |
| ! | AAGAAGGAACAAGGAAGTAC+AGG | + | chr7.1:4111271-4111290 | MS.gene050811:CDS | 40.0% |
| ! | ACAGTGACACATTTAGGGTT+AGG | - | chr7.1:4107722-4107741 | None:intergenic | 40.0% |
| ! | ACTTACCCATCCAAAGGTAT+AGG | - | chr7.1:4109112-4109131 | None:intergenic | 40.0% |
| ! | CATTGTTCGCATCGTTTTCA+TGG | + | chr7.1:4107544-4107563 | MS.gene050811:CDS | 40.0% |
| !! | AACTTTGGGACTGGATTGAA+TGG | - | chr7.1:4109576-4109595 | None:intergenic | 40.0% |
| !! | ACAAGGGAGTACTAAACAGA+TGG | + | chr7.1:4110372-4110391 | MS.gene050811:intron | 40.0% |
| !! | ATTGTTTTACGTGGCATGCA+AGG | + | chr7.1:4109539-4109558 | MS.gene050811:CDS | 40.0% |
| !! | CTCCCGTTTTCTATTTCTCA+AGG | + | chr7.1:4110580-4110599 | MS.gene050811:intron | 40.0% |
| !! | TGACGGGCTAAACTATACAA+TGG | - | chr7.1:4110142-4110161 | None:intergenic | 40.0% |
| !! | TGCTCTTGCATTGTTTTACG+TGG | + | chr7.1:4109530-4109549 | MS.gene050811:CDS | 40.0% |
| AGAACAGAGCAAAGCCTTGA+CGG | - | chr7.1:4110159-4110178 | None:intergenic | 45.0% | |
| AGGAACTTCTTCTGGGTAAC+TGG | - | chr7.1:4111538-4111557 | None:intergenic | 45.0% | |
| AGTTGAACCATGAAACAGGG+AGG | - | chr7.1:4108250-4108269 | None:intergenic | 45.0% | |
| ATAAAGTGAGACTCACCTGG+TGG | - | chr7.1:4111091-4111110 | None:intergenic | 45.0% | |
| ATGTAGTGTGTGCTGGAATG+AGG | - | chr7.1:4110226-4110245 | None:intergenic | 45.0% | |
| ATTGGACACATCCACAAGCA+AGG | - | chr7.1:4111469-4111488 | None:intergenic | 45.0% | |
| CAAGTCATCAGACAGACTGA+CGG | - | chr7.1:4109079-4109098 | None:intergenic | 45.0% | |
| CAGGACAGTCAACAATTGTC+AGG | - | chr7.1:4108873-4108892 | None:intergenic | 45.0% | |
| CTGTTGGTGCAGAACCAAAT+AGG | - | chr7.1:4107914-4107933 | None:intergenic | 45.0% | |
| GAAAGGGTTTCGAACTTGGA+AGG | + | chr7.1:4107780-4107799 | MS.gene050811:intron | 45.0% | |
| GAGATGCTTATTGCTGCAGT+GGG | + | chr7.1:4110948-4110967 | MS.gene050811:CDS | 45.0% | |
| GCTAAGGGGAAATACAAGGA+TGG | + | chr7.1:4109435-4109454 | MS.gene050811:CDS | 45.0% | |
| TCAACTTCAAAGCATGCCCA+AGG | - | chr7.1:4111046-4111065 | None:intergenic | 45.0% | |
| TCACGAACGTTTGTTCCGAT+TGG | + | chr7.1:4111294-4111313 | MS.gene050811:CDS | 45.0% | |
| TCACTTTGTCTAGCATGGGT+TGG | + | chr7.1:4109007-4109026 | MS.gene050811:CDS | 45.0% | |
| TGAAAGCCGCGGTAAAACAA+GGG | - | chr7.1:4108112-4108131 | None:intergenic | 45.0% | |
| TGAGATGCTTATTGCTGCAG+TGG | + | chr7.1:4110947-4110966 | MS.gene050811:CDS | 45.0% | |
| TTACCATGATACAGTCCACC+AGG | + | chr7.1:4111073-4111092 | MS.gene050811:CDS | 45.0% | |
| TTATCCATCTCTGGGCCAAT+CGG | - | chr7.1:4111312-4111331 | None:intergenic | 45.0% | |
| TTCCCACTCTTGTGATTGCA+CGG | - | chr7.1:4108601-4108620 | None:intergenic | 45.0% | |
| TTGAAAGCCGCGGTAAAACA+AGG | - | chr7.1:4108113-4108132 | None:intergenic | 45.0% | |
| ! | ATCGCTTTCTTTTGCACCGT+CGG | + | chr7.1:4107449-4107468 | MS.gene050811:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr7.1:4108791-4108810 | None:intergenic | 45.0% |
| ! | CTTATCCCACTAAGTGGGTT+CGG | - | chr7.1:4108786-4108805 | None:intergenic | 45.0% |
| ! | GCATCAGAGTTTGAAGCATC+AGG | - | chr7.1:4111435-4111454 | None:intergenic | 45.0% |
| ! | TACCCATCCAAAGGTATAGG+AGG | - | chr7.1:4109109-4109128 | None:intergenic | 45.0% |
| ! | TCGCATCGTTTTCATGGTTC+CGG | + | chr7.1:4107550-4107569 | MS.gene050811:CDS | 45.0% |
| ! | TCTCAAGTTGCTATCAGGGT+GGG | + | chr7.1:4110090-4110109 | MS.gene050811:intron | 45.0% |
| ! | TTCTCAAGTTGCTATCAGGG+TGG | + | chr7.1:4110089-4110108 | MS.gene050811:intron | 45.0% |
| !! | CCTGTCACTTTGTCTAGCAT+GGG | + | chr7.1:4109003-4109022 | MS.gene050811:CDS | 45.0% |
| !! | TCCTGTCACTTTGTCTAGCA+TGG | + | chr7.1:4109002-4109021 | MS.gene050811:CDS | 45.0% |
| !!! | TCTTGTCCCTTGTTTTACCG+CGG | + | chr7.1:4108103-4108122 | MS.gene050811:CDS | 45.0% |
| !! | TAAAAAAAAAAAAAAAAAAC+AGG | - | chr7.1:4109241-4109260 | None:intergenic | 5.0% |
| !!! | AATAAAAACTAATTTTTATA+TGG | + | chr7.1:4109797-4109816 | MS.gene050811:intron | 5.0% |
| AACCACAGTGAAGGGGAAGA+AGG | + | chr7.1:4111255-4111274 | MS.gene050811:CDS | 50.0% | |
| ACCCGTGCAATCACAAGAGT+GGG | + | chr7.1:4108596-4108615 | MS.gene050811:intron | 50.0% | |
| AGAGGCTAGGATGACACATG+TGG | + | chr7.1:4109273-4109292 | MS.gene050811:intron | 50.0% | |
| CAGCAGATAAAGCCGGTCTT+AGG | + | chr7.1:4111559-4111578 | MS.gene050811:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr7.1:4108789-4108808 | MS.gene050811:intron | 50.0% | |
| CCCATGCTAGACAAAGTGAC+AGG | - | chr7.1:4109006-4109025 | None:intergenic | 50.0% | |
| CGAACCCACTTAGTGGGATA+AGG | + | chr7.1:4108784-4108803 | MS.gene050811:intron | 50.0% | |
| CTGCTGCAGGAACTTCTTCT+GGG | - | chr7.1:4111545-4111564 | None:intergenic | 50.0% | |
| GAACAGAGCAAAGCCTTGAC+GGG | - | chr7.1:4110158-4110177 | None:intergenic | 50.0% | |
| GCTAATATAGGTGGATCCCG+TGG | + | chr7.1:4111008-4111027 | MS.gene050811:CDS | 50.0% | |
| GGAAGGTCAAAATGGGGTGA+AGG | + | chr7.1:4107797-4107816 | MS.gene050811:intron | 50.0% | |
| GTGAAGGGGAAGAAGGAACA+AGG | + | chr7.1:4111262-4111281 | MS.gene050811:CDS | 50.0% | |
| GTGCAATCACAAGAGTGGGA+AGG | + | chr7.1:4108600-4108619 | MS.gene050811:intron | 50.0% | |
| GTTCCTGCAGCAGATAAAGC+CGG | + | chr7.1:4111552-4111571 | MS.gene050811:CDS | 50.0% | |
| TACCCGTGCAATCACAAGAG+TGG | + | chr7.1:4108595-4108614 | MS.gene050811:intron | 50.0% | |
| TCCCACTCTTGTGATTGCAC+GGG | - | chr7.1:4108600-4108619 | None:intergenic | 50.0% | |
| TCTGCTGCAGGAACTTCTTC+TGG | - | chr7.1:4111546-4111565 | None:intergenic | 50.0% | |
| TGCAAAGTCGGGATTCATCC+AGG | + | chr7.1:4110881-4110900 | MS.gene050811:CDS | 50.0% | |
| TGTGTGCTGGAATGAGGACA+CGG | - | chr7.1:4110220-4110239 | None:intergenic | 50.0% | |
| TTCCTTCTTCCCCTTCACTG+TGG | - | chr7.1:4111260-4111279 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr7.1:4108792-4108811 | None:intergenic | 50.0% |
| ! | GGGATAAGGCTTGGTTGTTG+TGG | + | chr7.1:4108798-4108817 | MS.gene050811:intron | 50.0% |
| !! | CTTTGTCTAGCATGGGTTGG+TGG | + | chr7.1:4109010-4109029 | MS.gene050811:CDS | 50.0% |
| !! | TCACCTGGTGGACTGTATCA+TGG | - | chr7.1:4111079-4111098 | None:intergenic | 50.0% |
| AAGCAGCTTCGTCAGCATCC+TGG | - | chr7.1:4110902-4110921 | None:intergenic | 55.0% | |
| AAGGCTAGCGGTCAAACCAC+GGG | - | chr7.1:4111027-4111046 | None:intergenic | 55.0% | |
| AGCCAAAGCGATTGCACCGA+CGG | - | chr7.1:4107468-4107487 | None:intergenic | 55.0% | |
| ATGCAGCCGAACCCACTTAG+TGG | + | chr7.1:4108777-4108796 | MS.gene050811:intron | 55.0% | |
| CAAAGCATGCCCAAGGCTAG+CGG | - | chr7.1:4111039-4111058 | None:intergenic | 55.0% | |
| CAAGGCTAGCGGTCAAACCA+CGG | - | chr7.1:4111028-4111047 | None:intergenic | 55.0% | |
| GACACATGTGGCCCACTGTA+TGG | + | chr7.1:4109285-4109304 | MS.gene050811:intron | 55.0% | |
| TGCAGCCGAACCCACTTAGT+GGG | + | chr7.1:4108778-4108797 | MS.gene050811:intron | 55.0% | |
| ! | ACTAAGTGGGTTCGGCTGCA+TGG | - | chr7.1:4108778-4108797 | None:intergenic | 55.0% |
| ! | AGACCGGCTTTATCTGCTGC+AGG | - | chr7.1:4111558-4111577 | None:intergenic | 55.0% |
| ! | TGTTCCGATTGGCCCAGAGA+TGG | + | chr7.1:4111305-4111324 | MS.gene050811:CDS | 55.0% |
| !! | GTGGTTTGACCGCTAGCCTT+GGG | + | chr7.1:4111027-4111046 | MS.gene050811:CDS | 55.0% |
| CACCGTCGGTGCAATCGCTT+TGG | + | chr7.1:4107463-4107482 | MS.gene050811:CDS | 60.0% | |
| ! | CGTGGTTTGACCGCTAGCCT+TGG | + | chr7.1:4111026-4111045 | MS.gene050811:CDS | 60.0% |
| !! | CTAGCATGGGTTGGTGGTCC+TGG | + | chr7.1:4109016-4109035 | MS.gene050811:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 4107416 | 4111584 | 4107416 | ID=MS.gene050811 |
| chr7.1 | mRNA | 4107416 | 4111584 | 4107416 | ID=MS.gene050811.t1;Parent=MS.gene050811 |
| chr7.1 | exon | 4107416 | 4107571 | 4107416 | ID=MS.gene050811.t1.exon1;Parent=MS.gene050811.t1 |
| chr7.1 | CDS | 4107416 | 4107571 | 4107416 | ID=cds.MS.gene050811.t1;Parent=MS.gene050811.t1 |
| chr7.1 | exon | 4108084 | 4108157 | 4108084 | ID=MS.gene050811.t1.exon2;Parent=MS.gene050811.t1 |
| chr7.1 | CDS | 4108084 | 4108157 | 4108084 | ID=cds.MS.gene050811.t1;Parent=MS.gene050811.t1 |
| chr7.1 | exon | 4108976 | 4109125 | 4108976 | ID=MS.gene050811.t1.exon3;Parent=MS.gene050811.t1 |
| chr7.1 | CDS | 4108976 | 4109125 | 4108976 | ID=cds.MS.gene050811.t1;Parent=MS.gene050811.t1 |
| chr7.1 | exon | 4109350 | 4109635 | 4109350 | ID=MS.gene050811.t1.exon4;Parent=MS.gene050811.t1 |
| chr7.1 | CDS | 4109350 | 4109635 | 4109350 | ID=cds.MS.gene050811.t1;Parent=MS.gene050811.t1 |
| chr7.1 | exon | 4110861 | 4111094 | 4110861 | ID=MS.gene050811.t1.exon5;Parent=MS.gene050811.t1 |
| chr7.1 | CDS | 4110861 | 4111094 | 4110861 | ID=cds.MS.gene050811.t1;Parent=MS.gene050811.t1 |
| chr7.1 | exon | 4111222 | 4111584 | 4111222 | ID=MS.gene050811.t1.exon6;Parent=MS.gene050811.t1 |
| chr7.1 | CDS | 4111222 | 4111584 | 4111222 | ID=cds.MS.gene050811.t1;Parent=MS.gene050811.t1 |
| Gene Sequence |
| Protein sequence |
