Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35166.t1 | XP_003608512.2 | 95.4 | 347 | 15 | 1 | 59 | 405 | 46 | 391 | 1.00E-180 | 642.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35166.t1 | Q43064 | 92.8 | 347 | 24 | 1 | 59 | 405 | 46 | 391 | 2.5e-180 | 632.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35166.t1 | B9V281 | 95.4 | 347 | 15 | 1 | 59 | 405 | 46 | 391 | 7.3e-181 | 642.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053226 | MS.gene35166 | 0.815484 | 9.03E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35166.t1 | MTR_4g096900 | 95.389 | 347 | 15 | 1 | 59 | 405 | 46 | 391 | 0.0 | 651 |
| MS.gene35166.t1 | MTR_4g096900 | 98.658 | 298 | 4 | 0 | 108 | 405 | 39 | 336 | 0.0 | 604 |
| MS.gene35166.t1 | MTR_5g093570 | 85.397 | 315 | 46 | 0 | 91 | 405 | 70 | 384 | 0.0 | 555 |
| MS.gene35166.t1 | MTR_5g093570 | 87.562 | 201 | 25 | 0 | 91 | 291 | 70 | 270 | 1.86e-121 | 353 |
| MS.gene35166.t1 | MTR_3g112050 | 27.707 | 314 | 205 | 10 | 99 | 402 | 66 | 367 | 5.08e-19 | 88.2 |
| MS.gene35166.t1 | MTR_1g022420 | 25.796 | 314 | 211 | 9 | 95 | 398 | 60 | 361 | 6.58e-18 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35166.t1 | AT3G20330 | 79.876 | 323 | 61 | 1 | 87 | 405 | 68 | 390 | 0.0 | 533 |
| MS.gene35166.t1 | AT3G20330 | 79.876 | 323 | 61 | 1 | 87 | 405 | 68 | 390 | 0.0 | 533 |
| MS.gene35166.t1 | AT1G75330 | 28.076 | 317 | 206 | 9 | 96 | 402 | 69 | 373 | 4.18e-17 | 82.8 |
Find 84 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCTAAAATCTGGCTTTC+AGG | 0.121468 | 4.4:+19203307 | None:intergenic |
| GTGCAAACAATTTGTCAAAA+TGG | 0.167906 | 4.4:-19203492 | MS.gene35166:CDS |
| CCGAATATATAAACCATATT+TGG | 0.195568 | 4.4:+19201558 | None:intergenic |
| CCAAATATGGTTTATATATT+CGG | 0.263369 | 4.4:-19201558 | MS.gene35166:CDS |
| GAACACTACTCAGGCACTTT+TGG | 0.269298 | 4.4:-19202355 | MS.gene35166:intron |
| TACTTTAGGCAAGCCAAATA+TGG | 0.291184 | 4.4:-19201571 | MS.gene35166:CDS |
| AGCAATAGCTGCAGCTCTTC+TGG | 0.313000 | 4.4:+19202983 | None:intergenic |
| AGAAGAGCTGCAGCTATTGC+TGG | 0.319472 | 4.4:-19202981 | MS.gene35166:CDS |
| AATGGATTCTATCTCTTTGC+CGG | 0.348065 | 4.4:+19203452 | None:intergenic |
| AGTAGAGGGCTCATAAAATA+AGG | 0.365049 | 4.4:+19203270 | None:intergenic |
| GGAGGAGAGACGGCGGCGAC+CGG | 0.375829 | 4.4:-19205029 | MS.gene35166:CDS |
| TCAGGTTTGAACTGCAAAAC+TGG | 0.382327 | 4.4:+19204603 | None:intergenic |
| GGAAGAAAGTTCTGATTTAG+TGG | 0.385877 | 4.4:-19201903 | MS.gene35166:CDS |
| AAGCTTGATGGTATTAAAGT+TGG | 0.388302 | 4.4:-19202303 | MS.gene35166:CDS |
| TATACAATTGAAAGAGAGAT+TGG | 0.400447 | 4.4:-19202327 | MS.gene35166:CDS |
| GGTATTAAAGTTGGGCTTGT+TGG | 0.405372 | 4.4:-19202294 | MS.gene35166:CDS |
| ATCCAAGGGCTGCTTACTTT+AGG | 0.405934 | 4.4:-19201585 | MS.gene35166:CDS |
| TGCAAACAATTTGTCAAAAT+GGG | 0.407714 | 4.4:-19203491 | MS.gene35166:CDS |
| TAAGATAACCCTCTAAAATC+TGG | 0.421989 | 4.4:+19203299 | None:intergenic |
| GACATCAGAAGGAGTGGATT+GGG | 0.425793 | 4.4:-19201924 | MS.gene35166:CDS |
| AGCTTGATGGTATTAAAGTT+GGG | 0.431447 | 4.4:-19202302 | MS.gene35166:CDS |
| ACCTGTGTCGGATGTTGTCC+AGG | 0.453491 | 4.4:+19202930 | None:intergenic |
| GTTTCAGTGGCAGTGCAGTC+AGG | 0.456748 | 4.4:+19204585 | None:intergenic |
| ACCTTATGATGACACATTCA+TGG | 0.457686 | 4.4:-19205067 | None:intergenic |
| ATGCTTACTTCGTCAAGTCT+TGG | 0.461945 | 4.4:+19201722 | None:intergenic |
| CGGACGGACGGTTCGATCAC+TGG | 0.466089 | 4.4:-19202259 | MS.gene35166:CDS |
| AGAGAGATTGGAAAGCTTGA+TGG | 0.470401 | 4.4:-19202315 | MS.gene35166:CDS |
| TGGCAGGTTGAAGGCGGCGG+AGG | 0.482747 | 4.4:-19205047 | MS.gene35166:CDS |
| AAGTTCTGATTTAGTGGAAG+TGG | 0.483767 | 4.4:-19201897 | MS.gene35166:CDS |
| CGAAAGTCTAGTTCTAGTAG+AGG | 0.483999 | 4.4:+19203255 | None:intergenic |
| TGATTTAGTGGAAGTGGCCT+CGG | 0.485909 | 4.4:-19201891 | MS.gene35166:CDS |
| CGGCGGCGACCGGCGGTGCA+CGG | 0.490795 | 4.4:-19205019 | MS.gene35166:CDS |
| TGCCTAAAGTAAGCAGCCCT+TGG | 0.492242 | 4.4:+19201583 | None:intergenic |
| TGACATCAGAAGGAGTGGAT+TGG | 0.493820 | 4.4:-19201925 | MS.gene35166:CDS |
| GGCGTTCCAATAGTCAATGC+GGG | 0.494144 | 4.4:-19202960 | MS.gene35166:CDS |
| TGAGTCTGCTATGAGAAGAC+TGG | 0.499266 | 4.4:-19203230 | MS.gene35166:CDS |
| GAACCGTCCGTCCGTTGGCT+AGG | 0.499830 | 4.4:+19202268 | None:intergenic |
| CTTGTACTTTGCAAGCAAGT+AGG | 0.506586 | 4.4:+19202236 | None:intergenic |
| GCTAAAGGAGAGACGCTTGA+AGG | 0.514422 | 4.4:-19203160 | MS.gene35166:intron |
| ACACATTCATGGCAGGTTGA+AGG | 0.516034 | 4.4:-19205056 | MS.gene35166:CDS |
| CTGCACTGCCACTGAAACAC+AGG | 0.525690 | 4.4:-19204580 | MS.gene35166:intron |
| TGAAGGCGGCGGAGGAGAGA+CGG | 0.526257 | 4.4:-19205039 | MS.gene35166:CDS |
| TGGATGTTGACGCTGATCCA+AGG | 0.527758 | 4.4:-19201600 | MS.gene35166:CDS |
| AAAGACTATTTGACATCAGA+AGG | 0.528017 | 4.4:-19201935 | MS.gene35166:CDS |
| CTACTTGCTTGCAAAGTACA+AGG | 0.530311 | 4.4:-19202235 | MS.gene35166:CDS |
| TCATGGCAGGTTGAAGGCGG+CGG | 0.531144 | 4.4:-19205050 | MS.gene35166:CDS |
| TGTGAATTTGAATATTCTCA+AGG | 0.534658 | 4.4:-19201780 | MS.gene35166:CDS |
| TGATCGAACCGTCCGTCCGT+TGG | 0.560820 | 4.4:+19202263 | None:intergenic |
| GGAGAGACGGCGGCGACCGG+CGG | 0.562146 | 4.4:-19205026 | MS.gene35166:CDS |
| CTATTTGACATCAGAAGGAG+TGG | 0.562247 | 4.4:-19201930 | MS.gene35166:CDS |
| ACTTCGTCAAGTCTTGGAAG+AGG | 0.562949 | 4.4:+19201728 | None:intergenic |
| GATACAATAAGAACAGTTGA+GGG | 0.568220 | 4.4:-19203050 | MS.gene35166:CDS |
| TCTGCCCCTCTGAAAAGCAA+TGG | 0.569434 | 4.4:+19203434 | None:intergenic |
| AATCAGTTTCCGTGCACCGC+CGG | 0.576698 | 4.4:+19205010 | None:intergenic |
| ATATGGTTTATATATTCGGA+TGG | 0.577869 | 4.4:-19201554 | MS.gene35166:CDS |
| TATGATGACACATTCATGGC+AGG | 0.579474 | 4.4:-19205063 | None:intergenic |
| GTGCTTCGACACTTTGAAAG+TGG | 0.579532 | 4.4:-19203011 | MS.gene35166:CDS |
| CTTCGTCAAGTCTTGGAAGA+GGG | 0.584979 | 4.4:+19201729 | None:intergenic |
| AGATACAATAAGAACAGTTG+AGG | 0.586714 | 4.4:-19203051 | MS.gene35166:CDS |
| GGCGATGCAAAGACATGCCG+TGG | 0.595306 | 4.4:-19201759 | MS.gene35166:CDS |
| GGATGTTGACGCTGATCCAA+GGG | 0.614934 | 4.4:-19201599 | MS.gene35166:CDS |
| AAGCGTCTCTCCTTTAGCCG+CGG | 0.617353 | 4.4:+19203165 | None:intergenic |
| TTGGTGTACCTGTGTTTCAG+TGG | 0.618005 | 4.4:+19204572 | None:intergenic |
| GAGTCTGCTATGAGAAGACT+GGG | 0.620320 | 4.4:-19203229 | MS.gene35166:CDS |
| TGAAACTCTTGCTTGTTGGG+TGG | 0.621861 | 4.4:-19201525 | MS.gene35166:CDS |
| GCGTTCCAATAGTCAATGCG+GGG | 0.634493 | 4.4:-19202959 | MS.gene35166:CDS |
| GAATGCATGCCTACCTGTGT+CGG | 0.638231 | 4.4:+19202918 | None:intergenic |
| TGCACGGAAACTGATTATGA+TGG | 0.639062 | 4.4:-19205003 | MS.gene35166:CDS |
| TATGAGAAGACTGGGTGGAG+AGG | 0.641183 | 4.4:-19203221 | MS.gene35166:CDS |
| TGGCGTTCCAATAGTCAATG+CGG | 0.643059 | 4.4:-19202961 | MS.gene35166:CDS |
| GAAAGTCTAGTTCTAGTAGA+GGG | 0.643557 | 4.4:+19203256 | None:intergenic |
| AGACCTAGCCAACGGACGGA+CGG | 0.644006 | 4.4:-19202271 | MS.gene35166:CDS |
| ACGGAAACTGATTATGATGG+TGG | 0.644574 | 4.4:-19205000 | MS.gene35166:CDS |
| CATTCATGGCAGGTTGAAGG+CGG | 0.649986 | 4.4:-19205053 | MS.gene35166:CDS |
| TCCTGGACAACATCCGACAC+AGG | 0.657570 | 4.4:-19202931 | MS.gene35166:intron |
| TGGAAGAGGGTGCATAACCA+CGG | 0.659443 | 4.4:+19201742 | None:intergenic |
| AGGCGGCGGAGGAGAGACGG+CGG | 0.661548 | 4.4:-19205036 | MS.gene35166:CDS |
| TTGGAGACCTAGCCAACGGA+CGG | 0.663036 | 4.4:-19202275 | MS.gene35166:CDS |
| CGGAAACTGATTATGATGGT+GGG | 0.665193 | 4.4:-19204999 | MS.gene35166:intron |
| CTTGTTGGAGACCTAGCCAA+CGG | 0.678794 | 4.4:-19202279 | MS.gene35166:CDS |
| CGTTCCAATAGTCAATGCGG+GGG | 0.688550 | 4.4:-19202958 | MS.gene35166:CDS |
| ATAAACCACGTCACACTCCG+AGG | 0.690679 | 4.4:+19201874 | None:intergenic |
| AGTGGCCTCGGAGTGTGACG+TGG | 0.692222 | 4.4:-19201879 | MS.gene35166:CDS |
| TCTGCTATGAGAAGACTGGG+TGG | 0.712126 | 4.4:-19203226 | MS.gene35166:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTTATTTATATTGTG+CGG | + | chr4.4:19202089-19202108 | None:intergenic | 10.0% |
| !! | AAATTATTATAAGTATAAGA+AGG | + | chr4.4:19201848-19201867 | None:intergenic | 10.0% |
| !!! | TAAAATTTTCATCAAATTTT+GGG | + | chr4.4:19203931-19203950 | None:intergenic | 10.0% |
| !!! | TTAAAATTTTCATCAAATTT+TGG | + | chr4.4:19203932-19203951 | None:intergenic | 10.0% |
| !! | AAAGAAAATATATTGTTAGT+TGG | + | chr4.4:19202764-19202783 | None:intergenic | 15.0% |
| !! | ATTTAAACTATTGATCAAAA+TGG | + | chr4.4:19202661-19202680 | None:intergenic | 15.0% |
| !! | CTAATGATATTTACATTTAT+AGG | - | chr4.4:19204615-19204634 | MS.gene35166:CDS | 15.0% |
| !! | CTTAATTATTACTATCAAAA+AGG | + | chr4.4:19201899-19201918 | None:intergenic | 15.0% |
| !! | TTATTAATAGCTTATTAAAG+TGG | + | chr4.4:19204064-19204083 | None:intergenic | 15.0% |
| !!! | AAAATTAATTTGAGATTAAG+TGG | - | chr4.4:19204500-19204519 | MS.gene35166:intron | 15.0% |
| !! | AAAAAATCAATTAAACCTGA+TGG | + | chr4.4:19201697-19201716 | None:intergenic | 20.0% |
| !! | AAATAGATTGGATAAAATGT+AGG | - | chr4.4:19203764-19203783 | MS.gene35166:intron | 20.0% |
| !! | AACATCAAACTTGAAATTAA+GGG | + | chr4.4:19203471-19203490 | None:intergenic | 20.0% |
| !! | AGATATTATAATCCAAAACA+CGG | + | chr4.4:19203718-19203737 | None:intergenic | 20.0% |
| !! | ATGTTAGTCGTAAATAATTA+TGG | - | chr4.4:19204122-19204141 | MS.gene35166:intron | 20.0% |
| !! | CCAAATATGGTTTATATATT+CGG | - | chr4.4:19205023-19205042 | MS.gene35166:CDS | 20.0% |
| !! | GTAAATAATTATGGGATAAA+GGG | - | chr4.4:19204131-19204150 | MS.gene35166:intron | 20.0% |
| !! | TATTACTATCAAAAAGGAAA+GGG | + | chr4.4:19201893-19201912 | None:intergenic | 20.0% |
| !! | TCATGACAAAAATACTTATA+TGG | + | chr4.4:19202172-19202191 | None:intergenic | 20.0% |
| !! | TGATCAATAGTTTAAATTGT+TGG | - | chr4.4:19202664-19202683 | MS.gene35166:intron | 20.0% |
| !! | TGTTAGTCGTAAATAATTAT+GGG | - | chr4.4:19204123-19204142 | MS.gene35166:intron | 20.0% |
| !! | TTATTACTATCAAAAAGGAA+AGG | + | chr4.4:19201894-19201913 | None:intergenic | 20.0% |
| !! | TTTAAAAACATCAAACATGA+TGG | - | chr4.4:19203947-19203966 | MS.gene35166:intron | 20.0% |
| !!! | CTTTTAATATTTGCATTTCA+TGG | + | chr4.4:19203989-19204008 | None:intergenic | 20.0% |
| !!! | TACTAATACTATTTTGTCAT+GGG | - | chr4.4:19202057-19202076 | MS.gene35166:intron | 20.0% |
| !!! | TGTTTTGGATTATAATATCT+TGG | - | chr4.4:19203718-19203737 | MS.gene35166:intron | 20.0% |
| !!! | TTACTAATACTATTTTGTCA+TGG | - | chr4.4:19202056-19202075 | MS.gene35166:intron | 20.0% |
| !!! | TTCTTTAAAGAATTTCATTG+TGG | - | chr4.4:19203498-19203517 | MS.gene35166:CDS | 20.0% |
| ! | ATATGGTTTATATATTCGGA+TGG | - | chr4.4:19205027-19205046 | MS.gene35166:CDS | 25.0% |
| ! | ATTACTATCAAAAAGGAAAG+GGG | + | chr4.4:19201892-19201911 | None:intergenic | 25.0% |
| ! | CAACATCAAACTTGAAATTA+AGG | + | chr4.4:19203472-19203491 | None:intergenic | 25.0% |
| ! | CCGAATATATAAACCATATT+TGG | + | chr4.4:19205026-19205045 | None:intergenic | 25.0% |
| ! | CGTAAATAATTATGGGATAA+AGG | - | chr4.4:19204130-19204149 | MS.gene35166:intron | 25.0% |
| ! | CTGTATTATGTCAAATAGAT+TGG | - | chr4.4:19203752-19203771 | MS.gene35166:intron | 25.0% |
| ! | CTTATATGGTCAAAATCATT+TGG | + | chr4.4:19202158-19202177 | None:intergenic | 25.0% |
| ! | GATATTATAATCCAAAACAC+GGG | + | chr4.4:19203717-19203736 | None:intergenic | 25.0% |
| ! | GCACATAAAAATCTAGAAAT+AGG | + | chr4.4:19203073-19203092 | None:intergenic | 25.0% |
| ! | GGAAAAGGAAAATTTCAAAA+TGG | + | chr4.4:19202628-19202647 | None:intergenic | 25.0% |
| ! | TAACACAAGTATATACATTC+TGG | - | chr4.4:19203883-19203902 | MS.gene35166:intron | 25.0% |
| ! | TAATAGCTTATTAAAGTGGA+TGG | + | chr4.4:19204060-19204079 | None:intergenic | 25.0% |
| ! | TATACAATTGAAAGAGAGAT+TGG | - | chr4.4:19204254-19204273 | MS.gene35166:intron | 25.0% |
| ! | TGCAAACAATTTGTCAAAAT+GGG | - | chr4.4:19203090-19203109 | MS.gene35166:intron | 25.0% |
| ! | TGTGAATTTGAATATTCTCA+AGG | - | chr4.4:19204801-19204820 | MS.gene35166:intron | 25.0% |
| ! | TTGCATGAAAAAGATAGATT+TGG | + | chr4.4:19202031-19202050 | None:intergenic | 25.0% |
| ! | TTGGAGAACTAACAATTTAA+AGG | - | chr4.4:19202692-19202711 | MS.gene35166:intron | 25.0% |
| !! | AATTTTCATCAAATTTTGGG+TGG | + | chr4.4:19203928-19203947 | None:intergenic | 25.0% |
| !! | TATGTTTGAGATTTATGAGT+AGG | - | chr4.4:19204448-19204467 | MS.gene35166:intron | 25.0% |
| !!! | AAATGGTAATGTGTGTTTTT+TGG | - | chr4.4:19202334-19202353 | MS.gene35166:CDS | 25.0% |
| !!! | ATAGAGCATTTTGATATCTT+CGG | + | chr4.4:19202989-19203008 | None:intergenic | 25.0% |
| !!! | CAACTAGAAGTTTTGAAAAA+TGG | + | chr4.4:19203838-19203857 | None:intergenic | 25.0% |
| AAAGACTATTTGACATCAGA+AGG | - | chr4.4:19204646-19204665 | MS.gene35166:CDS | 30.0% | |
| AACTATTGATCAAAATGGTG+AGG | + | chr4.4:19202656-19202675 | None:intergenic | 30.0% | |
| AATTCTATCCTTGAAACTTC+TGG | + | chr4.4:19202389-19202408 | None:intergenic | 30.0% | |
| AGATACAATAAGAACAGTTG+AGG | - | chr4.4:19203530-19203549 | MS.gene35166:intron | 30.0% | |
| AGTTGTAAATCACGTAAACT+CGG | + | chr4.4:19204934-19204953 | None:intergenic | 30.0% | |
| ATTACAAGTAGAGGAAAGAA+AGG | + | chr4.4:19201808-19201827 | None:intergenic | 30.0% | |
| CGTATTCAAAAAGAACGATT+TGG | - | chr4.4:19204736-19204755 | MS.gene35166:intron | 30.0% | |
| CTGACAATGTGTTTAAAAGT+GGG | + | chr4.4:19202862-19202881 | None:intergenic | 30.0% | |
| GATACAATAAGAACAGTTGA+GGG | - | chr4.4:19203531-19203550 | MS.gene35166:intron | 30.0% | |
| GCATGAAAAATCTTGAATCA+TGG | - | chr4.4:19202281-19202300 | MS.gene35166:CDS | 30.0% | |
| GTGCAAACAATTTGTCAAAA+TGG | - | chr4.4:19203089-19203108 | MS.gene35166:intron | 30.0% | |
| GTTTAAATTGTTGGAGAACT+TGG | - | chr4.4:19202673-19202692 | MS.gene35166:intron | 30.0% | |
| GTTTACGTGATTTACAACTT+TGG | - | chr4.4:19204935-19204954 | MS.gene35166:intron | 30.0% | |
| GTTTATGTATAGTTCGTATC+AGG | - | chr4.4:19202235-19202254 | MS.gene35166:CDS | 30.0% | |
| GTTTCTTAGAAATTGTGGTT+GGG | - | chr4.4:19202793-19202812 | MS.gene35166:intron | 30.0% | |
| TAAAGGATCAATGAACTGTT+TGG | - | chr4.4:19202709-19202728 | MS.gene35166:intron | 30.0% | |
| TAGGTCATAAATTGTTTGGA+GGG | - | chr4.4:19202462-19202481 | MS.gene35166:intron | 30.0% | |
| TATATAACATTGCCCAATCA+GGG | + | chr4.4:19201751-19201770 | None:intergenic | 30.0% | |
| TCATAGCAAAATCTCCTATA+CGG | - | chr4.4:19203024-19203043 | MS.gene35166:CDS | 30.0% | |
| TCCTGAAAAATTACAAGTAG+AGG | + | chr4.4:19201817-19201836 | None:intergenic | 30.0% | |
| TCGAAGAAAGAAAGACAAAA+GGG | - | chr4.4:19201622-19201641 | MS.gene35166:intron | 30.0% | |
| TGACAATGTGTTTAAAAGTG+GGG | + | chr4.4:19202861-19202880 | None:intergenic | 30.0% | |
| TGTCTAGGTCATAAATTGTT+TGG | - | chr4.4:19202458-19202477 | MS.gene35166:intron | 30.0% | |
| TGTGGTAAAAATGAAGGTAA+TGG | - | chr4.4:19204397-19204416 | MS.gene35166:intron | 30.0% | |
| TTACAAGTAGAGGAAAGAAA+GGG | + | chr4.4:19201807-19201826 | None:intergenic | 30.0% | |
| TTAGGGTTTCTTAGAAATTG+TGG | - | chr4.4:19202788-19202807 | MS.gene35166:intron | 30.0% | |
| TTATATAACATTGCCCAATC+AGG | + | chr4.4:19201752-19201771 | None:intergenic | 30.0% | |
| ! | AAATGGTGTCAAACTAAAAC+TGG | + | chr4.4:19202611-19202630 | None:intergenic | 30.0% |
| ! | AAGCTTGATGGTATTAAAGT+TGG | - | chr4.4:19204278-19204297 | MS.gene35166:intron | 30.0% |
| ! | AATACTATTTTGTCATGGGT+GGG | - | chr4.4:19202061-19202080 | MS.gene35166:intron | 30.0% |
| ! | ACAAGTTCAAGCTAACATTT+TGG | + | chr4.4:19204195-19204214 | None:intergenic | 30.0% |
| ! | AGCTTGATGGTATTAAAGTT+GGG | - | chr4.4:19204279-19204298 | MS.gene35166:intron | 30.0% |
| ! | CAAAACTTCTAGTTGTATCA+TGG | - | chr4.4:19203843-19203862 | MS.gene35166:intron | 30.0% |
| ! | TAATACTATTTTGTCATGGG+TGG | - | chr4.4:19202060-19202079 | MS.gene35166:intron | 30.0% |
| ! | TCCTCTACTTGTAATTTTTC+AGG | - | chr4.4:19201813-19201832 | MS.gene35166:CDS | 30.0% |
| ! | TCTTTTGCTTCTTGCTTTAT+TGG | - | chr4.4:19202435-19202454 | MS.gene35166:intron | 30.0% |
| ! | TGATTTTATAGGTTCCGTAT+AGG | + | chr4.4:19203041-19203060 | None:intergenic | 30.0% |
| !! | ATCATTTTTGAACACTACTC+AGG | - | chr4.4:19204217-19204236 | MS.gene35166:intron | 30.0% |
| !! | TAAGATAACCCTCTAAAATC+TGG | + | chr4.4:19203285-19203304 | None:intergenic | 30.0% |
| !!! | ATTTTGAAACTCTTGCTTGT+TGG | - | chr4.4:19205052-19205071 | MS.gene35166:CDS | 30.0% |
| !!! | CTTGTAATTTTTCAGGACTA+AGG | - | chr4.4:19201820-19201839 | MS.gene35166:CDS | 30.0% |
| !!! | GGATAGCATGTTGATTTTAT+AGG | + | chr4.4:19203052-19203071 | None:intergenic | 30.0% |
| !!! | TATTGCTGTGGTTTTAGAAT+GGG | - | chr4.4:19202310-19202329 | MS.gene35166:CDS | 30.0% |
| !!! | TTTTGAAACTCTTGCTTGTT+GGG | - | chr4.4:19205053-19205072 | MS.gene35166:CDS | 30.0% |
| AAAAGTTGCCAGAAGTTTCA+AGG | - | chr4.4:19202378-19202397 | MS.gene35166:intron | 35.0% | |
| AGTAGAGGGCTCATAAAATA+AGG | + | chr4.4:19203314-19203333 | None:intergenic | 35.0% | |
| CAGAACTACTAGGAAATAAG+AGG | + | chr4.4:19201658-19201677 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTAAAAG+TGG | + | chr4.4:19202863-19202882 | None:intergenic | 35.0% | |
| CTAGGTCATAAATTGTTTGG+AGG | - | chr4.4:19202461-19202480 | MS.gene35166:intron | 35.0% | |
| GAAAGAAAGACAAAAGGGAT+TGG | - | chr4.4:19201627-19201646 | MS.gene35166:intron | 35.0% | |
| GACAATGTGTTTAAAAGTGG+GGG | + | chr4.4:19202860-19202879 | None:intergenic | 35.0% | |
| GACCTTTATGAAAAAGCTAG+AGG | - | chr4.4:19204769-19204788 | MS.gene35166:intron | 35.0% | |
| GGGACAAAGTGAAAAAATTC+CGG | - | chr4.4:19203110-19203129 | MS.gene35166:intron | 35.0% | |
| GGTTTCTTAGAAATTGTGGT+TGG | - | chr4.4:19202792-19202811 | MS.gene35166:intron | 35.0% | |
| GTCATGATTGTGACCAAATA+TGG | - | chr4.4:19202185-19202204 | MS.gene35166:intron | 35.0% | |
| GTCGAAGAAAGAAAGACAAA+AGG | - | chr4.4:19201621-19201640 | MS.gene35166:intron | 35.0% | |
| TACAAGTAGAGGAAAGAAAG+GGG | + | chr4.4:19201806-19201825 | None:intergenic | 35.0% | |
| TACTTTAGGCAAGCCAAATA+TGG | - | chr4.4:19205010-19205029 | MS.gene35166:CDS | 35.0% | |
| TATACCCAATGTTACACAAG+TGG | - | chr4.4:19201778-19201797 | MS.gene35166:CDS | 35.0% | |
| TCCAGATGTGGTAAAAATGA+AGG | - | chr4.4:19204391-19204410 | MS.gene35166:intron | 35.0% | |
| TGTATAGTTCGTATCAGGAT+CGG | - | chr4.4:19202240-19202259 | MS.gene35166:CDS | 35.0% | |
| TTGAGATTTATGAGTAGGCT+TGG | - | chr4.4:19204453-19204472 | MS.gene35166:intron | 35.0% | |
| TTGTGCGTTAGCGATAAAAT+GGG | + | chr4.4:19204582-19204601 | None:intergenic | 35.0% | |
| ! | AAGTTCTGATTTAGTGGAAG+TGG | - | chr4.4:19204684-19204703 | MS.gene35166:intron | 35.0% |
| ! | AATGGATTCTATCTCTTTGC+CGG | + | chr4.4:19203132-19203151 | None:intergenic | 35.0% |
| ! | ATCTCGCGCAACTTTAAAAA+TGG | + | chr4.4:19203230-19203249 | None:intergenic | 35.0% |
| ! | CATGATGGAGATCAAAATAG+AGG | - | chr4.4:19203962-19203981 | MS.gene35166:intron | 35.0% |
| ! | GGAAGAAAGTTCTGATTTAG+TGG | - | chr4.4:19204678-19204697 | MS.gene35166:intron | 35.0% |
| ! | TTCTTGCTTTATTGGTGTCT+AGG | - | chr4.4:19202443-19202462 | MS.gene35166:intron | 35.0% |
| !! | ACCTTCATTTTTACCACATC+TGG | + | chr4.4:19204395-19204414 | None:intergenic | 35.0% |
| !! | ACTGGAAAGCATTCAAGTAA+AGG | + | chr4.4:19202593-19202612 | None:intergenic | 35.0% |
| !! | AGAATCCATTGCTTTTCAGA+GGG | - | chr4.4:19203142-19203161 | MS.gene35166:intron | 35.0% |
| !! | CCACTTTTAAACACATTGTC+AGG | - | chr4.4:19202860-19202879 | MS.gene35166:intron | 35.0% |
| !! | GAAAGTCTAGTTCTAGTAGA+GGG | + | chr4.4:19203328-19203347 | None:intergenic | 35.0% |
| !! | TAGAATCCATTGCTTTTCAG+AGG | - | chr4.4:19203141-19203160 | MS.gene35166:intron | 35.0% |
| !! | TTATTTTGTCTCTCCAGATG+TGG | - | chr4.4:19204379-19204398 | MS.gene35166:intron | 35.0% |
| !! | TTGTTAGTTGGCTTGTTAGT+TGG | + | chr4.4:19202752-19202771 | None:intergenic | 35.0% |
| !!! | ATTGCTGTGGTTTTAGAATG+GGG | - | chr4.4:19202311-19202330 | MS.gene35166:CDS | 35.0% |
| !!! | GTATTGCTGTGGTTTTAGAA+TGG | - | chr4.4:19202309-19202328 | MS.gene35166:CDS | 35.0% |
| !!! | TATTTTGATGCAGATCACTG+TGG | - | chr4.4:19204961-19204980 | MS.gene35166:intron | 35.0% |
| !!! | TGCCTCTAGCTTTTTCATAA+AGG | + | chr4.4:19204774-19204793 | None:intergenic | 35.0% |
| !!! | TTTTAAAGTTGCGCGAGATA+TGG | - | chr4.4:19203231-19203250 | MS.gene35166:CDS | 35.0% |
| AAACATTTGACCAAGCGCAA+AGG | + | chr4.4:19204102-19204121 | None:intergenic | 40.0% | |
| AATCCAAAACACGGGAACTT+TGG | + | chr4.4:19203709-19203728 | None:intergenic | 40.0% | |
| AATGGTGAGGAGAAAGGAAA+AGG | + | chr4.4:19202643-19202662 | None:intergenic | 40.0% | |
| ACGGAAACTGATTATGATGG+TGG | - | chr4.4:19201581-19201600 | MS.gene35166:CDS | 40.0% | |
| AGAGAGATTGGAAAGCTTGA+TGG | - | chr4.4:19204266-19204285 | MS.gene35166:intron | 40.0% | |
| ATGCTTACTTCGTCAAGTCT+TGG | + | chr4.4:19204862-19204881 | None:intergenic | 40.0% | |
| CGGAAACTGATTATGATGGT+GGG | - | chr4.4:19201582-19201601 | MS.gene35166:CDS | 40.0% | |
| CTACTTGCTTGCAAAGTACA+AGG | - | chr4.4:19204346-19204365 | MS.gene35166:intron | 40.0% | |
| CTATTTGACATCAGAAGGAG+TGG | - | chr4.4:19204651-19204670 | MS.gene35166:CDS | 40.0% | |
| CTGATGCAGAGACAATTTGT+GGG | - | chr4.4:19202411-19202430 | MS.gene35166:intron | 40.0% | |
| CTTGTACTTTGCAAGCAAGT+AGG | + | chr4.4:19204348-19204367 | None:intergenic | 40.0% | |
| GATCAAAATGGTGAGGAGAA+AGG | + | chr4.4:19202649-19202668 | None:intergenic | 40.0% | |
| GGCTTTCTCAAACTCATTTG+TGG | - | chr4.4:19202483-19202502 | MS.gene35166:intron | 40.0% | |
| GGTATTAAAGTTGGGCTTGT+TGG | - | chr4.4:19204287-19204306 | MS.gene35166:intron | 40.0% | |
| GGTTCCACTTGTGTAACATT+GGG | + | chr4.4:19201785-19201804 | None:intergenic | 40.0% | |
| GTATCAGGATCGGACAAAAT+TGG | - | chr4.4:19202250-19202269 | MS.gene35166:CDS | 40.0% | |
| GTTGTGCGTTAGCGATAAAA+TGG | + | chr4.4:19204583-19204602 | None:intergenic | 40.0% | |
| TCACGCAGTTACTCCATATT+TGG | + | chr4.4:19202201-19202220 | None:intergenic | 40.0% | |
| TCAGGTTTGAACTGCAAAAC+TGG | + | chr4.4:19201981-19202000 | None:intergenic | 40.0% | |
| TCTGATGCAGAGACAATTTG+TGG | - | chr4.4:19202410-19202429 | MS.gene35166:intron | 40.0% | |
| TGCACGGAAACTGATTATGA+TGG | - | chr4.4:19201578-19201597 | MS.gene35166:CDS | 40.0% | |
| TTATCGCTAACGCACAACAT+TGG | - | chr4.4:19204585-19204604 | MS.gene35166:CDS | 40.0% | |
| ! | CCTGAAAGCCAGATTTTAGA+GGG | - | chr4.4:19203274-19203293 | MS.gene35166:CDS | 40.0% |
| ! | CTGCGAGATGAAACTGATTT+AGG | - | chr4.4:19203792-19203811 | MS.gene35166:intron | 40.0% |
| ! | TCAAATGTTGTGACTTGTGC+AGG | - | chr4.4:19204888-19204907 | MS.gene35166:intron | 40.0% |
| ! | TCATGGTTTGAGTATTGCTG+TGG | - | chr4.4:19202298-19202317 | MS.gene35166:CDS | 40.0% |
| ! | TCCTGAAAGCCAGATTTTAG+AGG | - | chr4.4:19203273-19203292 | MS.gene35166:CDS | 40.0% |
| !! | AGGGTTGGTTTCTTCTTCAA+TGG | - | chr4.4:19202913-19202932 | MS.gene35166:intron | 40.0% |
| !! | CGAAAGTCTAGTTCTAGTAG+AGG | + | chr4.4:19203329-19203348 | None:intergenic | 40.0% |
| !! | GAATCCATTGCTTTTCAGAG+GGG | - | chr4.4:19203143-19203162 | MS.gene35166:intron | 40.0% |
| !! | GCTTGGTGTGAGAAAAGAAT+TGG | - | chr4.4:19204470-19204489 | MS.gene35166:intron | 40.0% |
| !! | TTGTTTCTGCTATGCTTGCT+TGG | - | chr4.4:19204024-19204043 | MS.gene35166:intron | 40.0% |
| !!! | GTGGTTTTAGAATGGGGAAA+TGG | - | chr4.4:19202317-19202336 | MS.gene35166:CDS | 40.0% |
| ACACGTGAGACAGAACTACT+AGG | + | chr4.4:19201668-19201687 | None:intergenic | 45.0% | |
| ACTTCGTCAAGTCTTGGAAG+AGG | + | chr4.4:19204856-19204875 | None:intergenic | 45.0% | |
| ATCCAAGGGCTGCTTACTTT+AGG | - | chr4.4:19204996-19205015 | MS.gene35166:intron | 45.0% | |
| CTCACGTGTTTCTTTCCATC+AGG | - | chr4.4:19201679-19201698 | MS.gene35166:intron | 45.0% | |
| CTTCGTCAAGTCTTGGAAGA+GGG | + | chr4.4:19204855-19204874 | None:intergenic | 45.0% | |
| GAGTCTGCTATGAGAAGACT+GGG | - | chr4.4:19203352-19203371 | MS.gene35166:CDS | 45.0% | |
| GCGTTAGCGATAAAATGGGA+AGG | + | chr4.4:19204578-19204597 | None:intergenic | 45.0% | |
| GGGTTCCACTTGTGTAACAT+TGG | + | chr4.4:19201786-19201805 | None:intergenic | 45.0% | |
| GGTTGCAGTAGAATCCAACA+TGG | + | chr4.4:19203688-19203707 | None:intergenic | 45.0% | |
| TGACATCAGAAGGAGTGGAT+TGG | - | chr4.4:19204656-19204675 | MS.gene35166:CDS | 45.0% | |
| TGAGTCTGCTATGAGAAGAC+TGG | - | chr4.4:19203351-19203370 | MS.gene35166:CDS | 45.0% | |
| TGATTTAGTGGAAGTGGCCT+CGG | - | chr4.4:19204690-19204709 | MS.gene35166:intron | 45.0% | |
| TGGCGTTCCAATAGTCAATG+CGG | - | chr4.4:19203620-19203639 | MS.gene35166:intron | 45.0% | |
| TTGGTGTACCTGTGTTTCAG+TGG | + | chr4.4:19202012-19202031 | None:intergenic | 45.0% | |
| TTTCTCCTGCTCAATGCACA+TGG | - | chr4.4:19202952-19202971 | MS.gene35166:CDS | 45.0% | |
| ! | AAAAAAAAGGGTGTGCCACG+TGG | - | chr4.4:19201721-19201740 | MS.gene35166:intron | 45.0% |
| ! | ACACATTCATGGCAGGTTGA+AGG | - | chr4.4:19201525-19201544 | MS.gene35166:CDS | 45.0% |
| ! | CAACCAAAGTTCCCGTGTTT+TGG | - | chr4.4:19203703-19203722 | MS.gene35166:intron | 45.0% |
| ! | GAACACTACTCAGGCACTTT+TGG | - | chr4.4:19204226-19204245 | MS.gene35166:intron | 45.0% |
| ! | GACATCAGAAGGAGTGGATT+GGG | - | chr4.4:19204657-19204676 | MS.gene35166:CDS | 45.0% |
| ! | GTGCTTCGACACTTTGAAAG+TGG | - | chr4.4:19203570-19203589 | MS.gene35166:intron | 45.0% |
| ! | TGAAACTCTTGCTTGTTGGG+TGG | - | chr4.4:19205056-19205075 | MS.gene35166:CDS | 45.0% |
| ! | TGCTAGAGAATTTTCGTCCG+CGG | - | chr4.4:19203399-19203418 | MS.gene35166:CDS | 45.0% |
| ! | TTAAGAGACCCACATCGGTT+AGG | + | chr4.4:19202892-19202911 | None:intergenic | 45.0% |
| !! | CCCTCTAAAATCTGGCTTTC+AGG | + | chr4.4:19203277-19203296 | None:intergenic | 45.0% |
| !! | GGGTGGAGAGGTTTTAACAA+CGG | - | chr4.4:19203372-19203391 | MS.gene35166:CDS | 45.0% |
| !!! | AATATATTTTCTTTATTATT+AGG | - | chr4.4:19202770-19202789 | MS.gene35166:intron | 5.0% |
| !!! | ATATATTTTCTTTATTATTA+GGG | - | chr4.4:19202771-19202790 | MS.gene35166:intron | 5.0% |
| !!! | GATTTTTTTTTAAAAAAAAA+GGG | - | chr4.4:19201709-19201728 | MS.gene35166:intron | 5.0% |
| !!! | TAAAATAATTAAATGTATTT+TGG | - | chr4.4:19202108-19202127 | MS.gene35166:intron | 5.0% |
| !!! | TGATTTTTTTTTAAAAAAAA+AGG | - | chr4.4:19201708-19201727 | MS.gene35166:intron | 5.0% |
| ACCGATGTGGGTCTCTTAAC+AGG | - | chr4.4:19202893-19202912 | MS.gene35166:intron | 50.0% | |
| AGAAGAGCTGCAGCTATTGC+TGG | - | chr4.4:19203600-19203619 | MS.gene35166:intron | 50.0% | |
| AGCAATAGCTGCAGCTCTTC+TGG | + | chr4.4:19203601-19203620 | None:intergenic | 50.0% | |
| ATAAACCACGTCACACTCCG+AGG | + | chr4.4:19204710-19204729 | None:intergenic | 50.0% | |
| ATACCCTCATCCTTTGCGCT+TGG | - | chr4.4:19204089-19204108 | MS.gene35166:intron | 50.0% | |
| CAACTCCATGTGCATTGAGC+AGG | + | chr4.4:19202960-19202979 | None:intergenic | 50.0% | |
| CCCTGTTAAGAGACCCACAT+CGG | + | chr4.4:19202897-19202916 | None:intergenic | 50.0% | |
| CCGATGTGGGTCTCTTAACA+GGG | - | chr4.4:19202894-19202913 | MS.gene35166:intron | 50.0% | |
| CCTAACACAACCCCACAAAC+CGG | - | chr4.4:19202816-19202835 | MS.gene35166:intron | 50.0% | |
| CGTTCCAATAGTCAATGCGG+GGG | - | chr4.4:19203623-19203642 | MS.gene35166:intron | 50.0% | |
| CTTGTTGGAGACCTAGCCAA+CGG | - | chr4.4:19204302-19204321 | MS.gene35166:intron | 50.0% | |
| GAATGCATGCCTACCTGTGT+CGG | + | chr4.4:19203666-19203685 | None:intergenic | 50.0% | |
| GCGTTCCAATAGTCAATGCG+GGG | - | chr4.4:19203622-19203641 | MS.gene35166:intron | 50.0% | |
| GCTAAAGGAGAGACGCTTGA+AGG | - | chr4.4:19203421-19203440 | MS.gene35166:CDS | 50.0% | |
| GGATCGGACAAAATTGGCGA+CGG | - | chr4.4:19202256-19202275 | MS.gene35166:CDS | 50.0% | |
| GGATGTTGACGCTGATCCAA+GGG | - | chr4.4:19204982-19205001 | MS.gene35166:intron | 50.0% | |
| GGCGTTCCAATAGTCAATGC+GGG | - | chr4.4:19203621-19203640 | MS.gene35166:intron | 50.0% | |
| GGTAGGCATGCATTCCATGT+TGG | - | chr4.4:19203671-19203690 | MS.gene35166:intron | 50.0% | |
| TATGAGAAGACTGGGTGGAG+AGG | - | chr4.4:19203360-19203379 | MS.gene35166:CDS | 50.0% | |
| TCTGCTATGAGAAGACTGGG+TGG | - | chr4.4:19203355-19203374 | MS.gene35166:CDS | 50.0% | |
| TGACCAAGCGCAAAGGATGA+GGG | + | chr4.4:19204095-19204114 | None:intergenic | 50.0% | |
| TGCCTAAAGTAAGCAGCCCT+TGG | + | chr4.4:19205001-19205020 | None:intergenic | 50.0% | |
| TGGATGTTGACGCTGATCCA+AGG | - | chr4.4:19204981-19205000 | MS.gene35166:intron | 50.0% | |
| TGTGGGTCTCTTAACAGGGT+TGG | - | chr4.4:19202898-19202917 | MS.gene35166:intron | 50.0% | |
| TTGACCAAGCGCAAAGGATG+AGG | + | chr4.4:19204096-19204115 | None:intergenic | 50.0% | |
| ! | AGCGCAAAGGATGAGGGTAT+TGG | + | chr4.4:19204089-19204108 | None:intergenic | 50.0% |
| ! | CATTCATGGCAGGTTGAAGG+CGG | - | chr4.4:19201528-19201547 | MS.gene35166:CDS | 50.0% |
| ! | GAATTTTCGTCCGCGGCTAA+AGG | - | chr4.4:19203406-19203425 | MS.gene35166:CDS | 50.0% |
| ! | TCTGCCCCTCTGAAAAGCAA+TGG | + | chr4.4:19203150-19203169 | None:intergenic | 50.0% |
| ! | TGGAAGAGGGTGCATAACCA+CGG | + | chr4.4:19204842-19204861 | None:intergenic | 50.0% |
| AAGCGTCTCTCCTTTAGCCG+CGG | + | chr4.4:19203419-19203438 | None:intergenic | 55.0% | |
| AATCAGTTTCCGTGCACCGC+CGG | + | chr4.4:19201574-19201593 | None:intergenic | 55.0% | |
| ACCTGTGTCGGATGTTGTCC+AGG | + | chr4.4:19203654-19203673 | None:intergenic | 55.0% | |
| AGGCCATCTCCTAACCGATG+TGG | - | chr4.4:19202880-19202899 | MS.gene35166:intron | 55.0% | |
| CCAATAGTCAATGCGGGGGA+TGG | - | chr4.4:19203627-19203646 | MS.gene35166:intron | 55.0% | |
| CTGCACTGCCACTGAAACAC+AGG | - | chr4.4:19202001-19202020 | MS.gene35166:intron | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr4.4:19202838-19202857 | None:intergenic | 55.0% | |
| GGACAACATCCGACACAGGT+AGG | - | chr4.4:19203654-19203673 | MS.gene35166:intron | 55.0% | |
| GGCCATCTCCTAACCGATGT+GGG | - | chr4.4:19202881-19202900 | MS.gene35166:intron | 55.0% | |
| GTTTCAGTGGCAGTGCAGTC+AGG | + | chr4.4:19201999-19202018 | None:intergenic | 55.0% | |
| TCCTGGACAACATCCGACAC+AGG | - | chr4.4:19203650-19203669 | MS.gene35166:intron | 55.0% | |
| TTGGAGACCTAGCCAACGGA+CGG | - | chr4.4:19204306-19204325 | MS.gene35166:intron | 55.0% | |
| ! | CCGGTTTGTGGGGTTGTGTT+AGG | + | chr4.4:19202819-19202838 | None:intergenic | 55.0% |
| ! | GACCCACATCGGTTAGGAGA+TGG | + | chr4.4:19202886-19202905 | None:intergenic | 55.0% |
| ! | TGACTTGTGCAGGTCTCGCT+AGG | - | chr4.4:19204898-19204917 | MS.gene35166:intron | 55.0% |
| !! | ACAAACCGGCTTGTGAGGTG+AGG | - | chr4.4:19202830-19202849 | MS.gene35166:intron | 55.0% |
| !! | ACCTCACAAGCCGGTTTGTG+GGG | + | chr4.4:19202829-19202848 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTGT+GGG | + | chr4.4:19202830-19202849 | None:intergenic | 55.0% |
| !! | CCATCCCCCGCATTGACTAT+TGG | + | chr4.4:19203630-19203649 | None:intergenic | 55.0% |
| !! | TCACCTCACAAGCCGGTTTG+TGG | + | chr4.4:19202831-19202850 | None:intergenic | 55.0% |
| AGACCTAGCCAACGGACGGA+CGG | - | chr4.4:19204310-19204329 | MS.gene35166:intron | 60.0% | |
| CCACGTGGCACACCCTGATT+GGG | - | chr4.4:19201736-19201755 | MS.gene35166:CDS | 60.0% | |
| GGCGATGCAAAGACATGCCG+TGG | - | chr4.4:19204822-19204841 | MS.gene35166:intron | 60.0% | |
| TGATCGAACCGTCCGTCCGT+TGG | + | chr4.4:19204321-19204340 | None:intergenic | 60.0% | |
| ! | TCATGGCAGGTTGAAGGCGG+CGG | - | chr4.4:19201531-19201550 | MS.gene35166:CDS | 60.0% |
| !! | ACCCCACAAACCGGCTTGTG+AGG | - | chr4.4:19202825-19202844 | MS.gene35166:intron | 60.0% |
| AGTGGCCTCGGAGTGTGACG+TGG | - | chr4.4:19204702-19204721 | MS.gene35166:intron | 65.0% | |
| CCCAATCAGGGTGTGCCACG+TGG | + | chr4.4:19201739-19201758 | None:intergenic | 65.0% | |
| CGGACGGACGGTTCGATCAC+TGG | - | chr4.4:19204322-19204341 | MS.gene35166:intron | 65.0% | |
| GCCACGTGGCACACCCTGAT+TGG | - | chr4.4:19201735-19201754 | MS.gene35166:CDS | 65.0% | |
| GTCAATGCGGGGGATGGTCC+TGG | - | chr4.4:19203633-19203652 | MS.gene35166:intron | 65.0% | |
| TGAAGGCGGCGGAGGAGAGA+CGG | - | chr4.4:19201542-19201561 | MS.gene35166:CDS | 65.0% | |
| ! | GAACCGTCCGTCCGTTGGCT+AGG | + | chr4.4:19204316-19204335 | None:intergenic | 65.0% |
| ! | TGGCAGGTTGAAGGCGGCGG+AGG | - | chr4.4:19201534-19201553 | MS.gene35166:CDS | 70.0% |
| AGGCGGCGGAGGAGAGACGG+CGG | - | chr4.4:19201545-19201564 | MS.gene35166:CDS | 75.0% | |
| GGAGGAGAGACGGCGGCGAC+CGG | - | chr4.4:19201552-19201571 | MS.gene35166:CDS | 75.0% | |
| ! | GGAGAGACGGCGGCGACCGG+CGG | - | chr4.4:19201555-19201574 | MS.gene35166:CDS | 80.0% |
| ! | CGGCGGCGACCGGCGGTGCA+CGG | - | chr4.4:19201562-19201581 | MS.gene35166:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 19201522 | 19205081 | 19201522 | ID=MS.gene35166 |
| chr4.4 | mRNA | 19201522 | 19205081 | 19201522 | ID=MS.gene35166.t1;Parent=MS.gene35166 |
| chr4.4 | exon | 19205000 | 19205081 | 19205000 | ID=MS.gene35166.t1.exon1;Parent=MS.gene35166.t1 |
| chr4.4 | CDS | 19205000 | 19205081 | 19205000 | ID=cds.MS.gene35166.t1;Parent=MS.gene35166.t1 |
| chr4.4 | exon | 19204581 | 19204695 | 19204581 | ID=MS.gene35166.t1.exon2;Parent=MS.gene35166.t1 |
| chr4.4 | CDS | 19204581 | 19204695 | 19204581 | ID=cds.MS.gene35166.t1;Parent=MS.gene35166.t1 |
| chr4.4 | exon | 19203161 | 19203522 | 19203161 | ID=MS.gene35166.t1.exon3;Parent=MS.gene35166.t1 |
| chr4.4 | CDS | 19203161 | 19203522 | 19203161 | ID=cds.MS.gene35166.t1;Parent=MS.gene35166.t1 |
| chr4.4 | exon | 19202932 | 19203071 | 19202932 | ID=MS.gene35166.t1.exon4;Parent=MS.gene35166.t1 |
| chr4.4 | CDS | 19202932 | 19203071 | 19202932 | ID=cds.MS.gene35166.t1;Parent=MS.gene35166.t1 |
| chr4.4 | exon | 19202191 | 19202364 | 19202191 | ID=MS.gene35166.t1.exon5;Parent=MS.gene35166.t1 |
| chr4.4 | CDS | 19202191 | 19202364 | 19202191 | ID=cds.MS.gene35166.t1;Parent=MS.gene35166.t1 |
| chr4.4 | exon | 19201730 | 19201966 | 19201730 | ID=MS.gene35166.t1.exon6;Parent=MS.gene35166.t1 |
| chr4.4 | CDS | 19201730 | 19201966 | 19201730 | ID=cds.MS.gene35166.t1;Parent=MS.gene35166.t1 |
| chr4.4 | exon | 19201522 | 19201629 | 19201522 | ID=MS.gene35166.t1.exon7;Parent=MS.gene35166.t1 |
| chr4.4 | CDS | 19201522 | 19201629 | 19201522 | ID=cds.MS.gene35166.t1;Parent=MS.gene35166.t1 |
| Gene Sequence |
| Protein sequence |
