AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053226


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053226.t1 MTR_4g006760 97.604 626 15 0 1 626 1 626 0.0 1244
MS.gene053226.t1 MTR_4g125920 87.440 629 75 4 1 625 1 629 0.0 1053
MS.gene053226.t1 MTR_4g131350 86.804 629 79 4 1 625 54 682 0.0 1045
MS.gene053226.t1 MTR_4g131310 72.284 451 81 5 1 446 1 412 0.0 573
MS.gene053226.t1 MTR_4g131310 86.765 68 9 0 550 617 390 457 2.86e-30 124
MS.gene053226.t1 MTR_3g067815 43.302 642 339 9 1 622 1 637 4.32e-172 504
MS.gene053226.t1 MTR_5g079940 40.979 654 348 13 5 625 472 1120 3.20e-144 447
MS.gene053226.t1 MTR_5g079940 44.231 104 54 4 1 102 1 102 4.25e-16 82.8
MS.gene053226.t1 MTR_5g079940 43.023 86 43 3 19 103 131 211 4.98e-14 76.3
MS.gene053226.t1 MTR_5g079940 41.860 86 45 2 19 103 247 328 7.09e-14 75.9
MS.gene053226.t1 MTR_5g079940 40.426 94 52 3 5 94 353 446 8.13e-12 68.9
MS.gene053226.t1 MTR_2g097020 35.180 668 345 15 13 614 10 655 6.64e-108 340
MS.gene053226.t1 MTR_2g097010 35.285 649 343 13 31 614 30 666 2.34e-101 323
MS.gene053226.t1 MTR_4g046643 36.177 633 339 15 31 608 30 652 2.45e-96 311
MS.gene053226.t1 MTR_2g095400 34.370 643 360 12 10 614 7 625 5.90e-86 281
MS.gene053226.t1 MTR_4g126200 44.275 262 115 4 381 624 3 251 1.50e-62 208
MS.gene053226.t1 MTR_2g097000 37.731 379 195 8 266 614 10 377 1.81e-57 199
MS.gene053226.t1 MTR_3g067855 50.685 219 104 4 408 625 123 338 8.35e-56 193
MS.gene053226.t1 MTR_3g067845 42.460 252 139 4 376 625 4 251 6.02e-48 169
MS.gene053226.t1 MTR_3g067825 48.000 100 42 3 533 625 7 103 1.52e-20 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053226.t1 AT1G15910 56.543 619 255 5 18 624 17 633 0.0 671
MS.gene053226.t1 AT4G00380 54.854 618 266 4 19 624 18 634 0.0 652
MS.gene053226.t1 AT4G00380 54.854 618 266 4 19 624 18 634 0.0 652
MS.gene053226.t1 AT4G00380 51.707 615 262 5 19 624 18 606 0.0 604
MS.gene053226.t1 AT1G80790 54.032 620 268 9 19 625 19 634 0.0 597
MS.gene053226.t1 AT1G80790 54.032 620 268 9 19 625 19 634 0.0 597
MS.gene053226.t1 AT3G48670 41.429 630 344 11 16 625 21 645 4.27e-149 446
MS.gene053226.t1 AT3G48670 41.429 630 344 11 16 625 21 645 4.27e-149 446
MS.gene053226.t1 AT3G48670 41.429 630 344 11 16 625 21 645 4.27e-149 446
MS.gene053226.t1 AT1G80790 53.863 453 194 7 19 459 19 468 9.55e-148 436
MS.gene053226.t1 AT3G12550 36.220 635 370 11 16 621 5 633 1.44e-116 361
MS.gene053226.t1 AT3G12550 36.164 636 370 11 16 621 5 634 8.65e-116 359
MS.gene053226.t1 AT3G12550 36.164 636 370 11 16 621 5 634 8.65e-116 359
MS.gene053226.t1 AT3G12550 36.164 636 370 11 16 621 5 634 8.65e-116 359
MS.gene053226.t1 AT1G13790 38.704 540 302 7 93 615 197 724 6.04e-109 345
MS.gene053226.t1 AT1G13790 38.272 81 50 0 12 92 3 83 2.04e-12 70.9
MS.gene053226.t1 AT1G13790 38.704 540 302 7 93 615 197 724 6.04e-109 345
MS.gene053226.t1 AT1G13790 38.272 81 50 0 12 92 3 83 2.04e-12 70.9
MS.gene053226.t1 AT3G12550 33.874 555 333 10 16 542 5 553 1.05e-88 287
MS.gene053226.t1 AT5G59390 34.381 541 307 16 113 624 30 551 1.53e-79 262
MS.gene053226.t1 AT5G59390 34.381 541 307 16 113 624 30 551 1.53e-79 262
MS.gene053226.t1 AT5G59390 34.381 541 307 16 113 624 30 551 1.53e-79 262
MS.gene053226.t1 AT5G59390 34.066 546 307 17 113 624 30 556 2.99e-77 256
MS.gene053226.t1 AT5G59390 34.066 546 307 17 113 624 30 556 2.99e-77 256
MS.gene053226.t1 AT4G01180 33.959 533 299 15 113 614 28 538 5.23e-74 248
MS.gene053226.t1 AT4G01780 33.406 458 205 8 170 625 111 470 4.83e-65 221
MS.gene053226.t1 AT3G29375 44.776 201 105 2 424 624 32 226 2.94e-46 163
MS.gene053226.t1 AT3G29375 44.776 201 105 2 424 624 155 349 1.34e-44 163
MS.gene053226.t1 AT3G29375 41.406 128 68 3 424 551 32 152 1.39e-18 84.3
MS.gene053226.t1 AT2G16490 43.243 74 42 0 551 624 75 148 8.17e-15 73.6

Find 138 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTGTAACCACTTTAAA+AGG 0.096361 4.2:+92804844 None:intergenic
CAACTGAAGGATCTTGTTTA+AGG 0.147603 4.2:+92805584 None:intergenic
CTGTCGAGCTTTGCTCTTTA+TGG 0.200712 4.2:-92804897 MS.gene053226:CDS
CTTGGTGCCAATATTAGTTT+TGG 0.243764 4.2:+92804999 None:intergenic
ATGGAAATTGAAGAACTAAA+AGG 0.270508 4.2:-92805528 MS.gene053226:CDS
GGAAGACAAAATAGAAAGTT+TGG 0.287888 4.2:-92805424 MS.gene053226:CDS
ATAAGCAAATCACATGATTC+TGG 0.315654 4.2:-92807219 MS.gene053226:CDS
TACAAAGTGAAGAACAATAA+TGG 0.316359 4.2:-92807507 MS.gene053226:CDS
TTGGAATTCCATGGACTTGC+AGG 0.324273 4.2:-92807031 MS.gene053226:CDS
AATAGAAAGTTTGGAAGATA+TGG 0.336318 4.2:-92805415 MS.gene053226:CDS
TTCTGATGAAGCTGGGATAA+AGG 0.336391 4.2:-92804920 MS.gene053226:CDS
AAAGCAGGAATTCAAATATA+AGG 0.338005 4.2:-92807451 MS.gene053226:CDS
TGTGGAACTTCAAAGAAAAT+AGG 0.338398 4.2:-92804572 MS.gene053226:CDS
ACTGGTGCCAAAACTAATAT+TGG 0.346735 4.2:-92805006 MS.gene053226:CDS
AGAAAAGTTGAGTAATGAAT+TGG 0.351658 4.2:-92806563 MS.gene053226:CDS
CCTGTAGTTCATCATTGCTT+TGG 0.360050 4.2:+92805358 None:intergenic
CAGGACAGTTCAGAGATTTA+CGG 0.365740 4.2:-92807012 MS.gene053226:CDS
TGAGGAGGTACGAAGGATAT+TGG 0.370766 4.2:-92806593 MS.gene053226:CDS
CGATCAAGAGAGGCAGAAAC+TGG 0.373050 4.2:-92806479 MS.gene053226:CDS
CCAGCCCTTAACTCTTCATA+TGG 0.378071 4.2:+92807534 None:intergenic
AGAAACCATATGAAGAGTTA+AGG 0.381900 4.2:-92807539 MS.gene053226:CDS
TCTGCTCCTTTGAGGCCAAC+TGG 0.386894 4.2:+92805788 None:intergenic
CCAGTGGTGGGTATACTGTT+TGG 0.391573 4.2:-92804599 MS.gene053226:CDS
CAGTGGTGGGTATACTGTTT+GGG 0.392443 4.2:-92804598 MS.gene053226:CDS
ACAAAGTGAAGAACAATAAT+GGG 0.394132 4.2:-92807506 MS.gene053226:CDS
GATCTGTTGCAGCATGCATC+TGG 0.396114 4.2:-92807429 MS.gene053226:CDS
AGCTATCTTCTGCTCCTTTG+AGG 0.404036 4.2:+92805780 None:intergenic
GGCTGTTCATACGTTCTTGA+TGG 0.404762 4.2:-92807160 MS.gene053226:CDS
TTAGTACCTCACGCTTGTTT+AGG 0.407923 4.2:+92806503 None:intergenic
ATAATTGTCCAGGGTCGATT+GGG 0.410920 4.2:-92806966 MS.gene053226:CDS
GTCAAGGTCTCCCATCCTCT+TGG 0.419346 4.2:+92804981 None:intergenic
CAGGCTTGTTGAAGAGCAAA+AGG 0.422308 4.2:-92805743 MS.gene053226:intron
CTTGTTTAGGTCTCTGCTCC+AGG 0.422956 4.2:+92806516 None:intergenic
TGGAAATTGAAGAACTAAAA+GGG 0.432185 4.2:-92805527 MS.gene053226:CDS
CAGTTCAGAGATTTACGGTT+GGG 0.434103 4.2:-92807007 MS.gene053226:CDS
TATAATTGTCCAGGGTCGAT+TGG 0.446459 4.2:-92806967 MS.gene053226:CDS
ACTTCAACAATGACTGGAAT+GGG 0.453119 4.2:-92807113 MS.gene053226:CDS
CTGCAAGTCATGAAACATCT+TGG 0.454930 4.2:-92805501 MS.gene053226:CDS
GAAACCATATGAAGAGTTAA+GGG 0.456039 4.2:-92807538 MS.gene053226:CDS
CAGTTTCTGCCTCTCTTGAT+CGG 0.457451 4.2:+92806480 None:intergenic
GAAGATGATTATAATTGTCC+AGG 0.464276 4.2:-92806976 MS.gene053226:CDS
TCAAAGCCGGGCGAGGTACT+TGG 0.465289 4.2:+92807310 None:intergenic
TAGCTGATGAGAATGTCTTC+AGG 0.469727 4.2:-92805762 MS.gene053226:CDS
CAACTGGAGTGATTGATTCC+TGG 0.474236 4.2:+92805804 None:intergenic
GGTATACTGTTTGGGAGCTG+TGG 0.476632 4.2:-92804590 MS.gene053226:CDS
TACAAAAGCTGAAGAAGGAA+TGG 0.478989 4.2:-92804680 MS.gene053226:CDS
TAATATCAATCTCATTTGCC+AGG 0.479312 4.2:+92806857 None:intergenic
GGAAGAGATGAATTCAGAGT+TGG 0.479922 4.2:-92805445 MS.gene053226:CDS
ATCACTCCAGTTGGCCTCAA+AGG 0.480055 4.2:-92805794 MS.gene053226:CDS
AAAACAGAAGGCAAACCATC+TGG 0.480375 4.2:-92807376 MS.gene053226:CDS
CGAGCTTTGCTCTTTATGGC+AGG 0.485391 4.2:-92804893 MS.gene053226:CDS
TCCAAGTTGAGAACTACGTT+TGG 0.494414 4.2:-92807266 MS.gene053226:CDS
TTATAGACTTCAACAATGAC+TGG 0.495035 4.2:-92807119 MS.gene053226:CDS
ACAAAAGCTGAAGAAGGAAT+GGG 0.498002 4.2:-92804679 MS.gene053226:CDS
ATCTCAACAAGATGCAGTAT+AGG 0.500867 4.2:-92806825 MS.gene053226:CDS
TCTCTGTAACCACTTTAAAA+GGG 0.509171 4.2:+92804845 None:intergenic
ACTTAGGTGTCCGTATTGCT+CGG 0.510947 4.2:-92807481 MS.gene053226:CDS
ATGCAAGCGAGCTTGAGAAA+TGG 0.512413 4.2:-92807083 MS.gene053226:CDS
AACTACGTTTGGCCGTGGAC+AGG 0.513586 4.2:-92807255 MS.gene053226:CDS
GAATTTAACGCTTATTGTCA+AGG 0.513944 4.2:-92805385 MS.gene053226:CDS
TAATATTGGCACCAAGAGGA+TGG 0.524177 4.2:-92804992 MS.gene053226:CDS
TATGTCCTTGAGTAGGATGC+TGG 0.524242 4.2:-92806788 MS.gene053226:CDS
CCAAACAGTATACCCACCAC+TGG 0.525403 4.2:+92804599 None:intergenic
CCAAAGCAATGATGAACTAC+AGG 0.526461 4.2:-92805358 MS.gene053226:CDS
CTTAAACAAGATCCTTCAGT+TGG 0.526740 4.2:-92805583 MS.gene053226:CDS
ACGTAGTTCTCAACTTGGAC+AGG 0.526836 4.2:+92807270 None:intergenic
GCCAAACGTAGTTCTCAACT+TGG 0.528155 4.2:+92807265 None:intergenic
TGAACTGTCCTGCAAGTCCA+TGG 0.528763 4.2:+92807023 None:intergenic
AAATAGCATTGTGGAAAACC+TGG 0.534545 4.2:-92806875 MS.gene053226:CDS
GACTTCAACAATGACTGGAA+TGG 0.535886 4.2:-92807114 MS.gene053226:CDS
TCAGCCTTCCTTTGTTGCGA+AGG 0.537542 4.2:+92806938 None:intergenic
CTTAGGTGTCCGTATTGCTC+GGG 0.537566 4.2:-92807480 MS.gene053226:CDS
ATCTGGAGTAGGCAAAGGTT+CGG 0.537904 4.2:-92807412 MS.gene053226:CDS
GATGGGAGACCTTGACCAGA+AGG 0.539667 4.2:-92804974 MS.gene053226:CDS
GTTCATACGTTCTTGATGGA+TGG 0.543612 4.2:-92807156 MS.gene053226:CDS
AAATGAGGAAGCTTGATACC+TGG 0.545605 4.2:-92806534 MS.gene053226:CDS
TCCAAACTACCAGAGAGAAA+AGG 0.547284 4.2:-92805613 MS.gene053226:intron
TTGAGAACTACGTTTGGCCG+TGG 0.547439 4.2:-92807260 MS.gene053226:CDS
GAAACTACAAAAGCTGAAGA+AGG 0.547462 4.2:-92804685 MS.gene053226:CDS
CCATATGAAGAGTTAAGGGC+TGG 0.547915 4.2:-92807534 MS.gene053226:CDS
AAACAGAAGCACAAAACAGA+AGG 0.549041 4.2:-92807388 MS.gene053226:CDS
TGTCCTTCCAGAAAGACTCC+AGG 0.550329 4.2:-92805822 MS.gene053226:intron
ACGACAGCTAAGGTCAAAGC+CGG 0.553034 4.2:+92807297 None:intergenic
ATTTGCTAAGTACAAACCAT+TGG 0.554128 4.2:-92807181 MS.gene053226:CDS
AGCAGACCAAGTACCTCGCC+CGG 0.554305 4.2:-92807316 MS.gene053226:CDS
ACTGGAAGAGGACAAGAAGA+AGG 0.555312 4.2:-92806461 MS.gene053226:intron
TGATTCTGGATACTTGCAAA+AGG 0.555382 4.2:-92807205 MS.gene053226:CDS
AGTTCTCAACTTGGACAGGT+TGG 0.556864 4.2:+92807274 None:intergenic
GCTAAGGTCAAAGCCGGGCG+AGG 0.561717 4.2:+92807303 None:intergenic
AGAAGTGATCACTTATATTG+TGG 0.563683 4.2:-92804535 MS.gene053226:CDS
TTGCAGCATGCATCTGGAGT+AGG 0.566883 4.2:-92807423 MS.gene053226:CDS
TAAGCGCAAGAGAGGAGGAT+AGG 0.567186 4.2:-92804496 None:intergenic
CAGGAATCAATCACTCCAGT+TGG 0.571555 4.2:-92805803 MS.gene053226:CDS
ATGATGAACTACAGGAAGCT+CGG 0.574508 4.2:-92805350 MS.gene053226:CDS
AGAACAATAATGGGACACTT+AGG 0.574673 4.2:-92807497 MS.gene053226:CDS
AGGTACTCCCCAATCGACCC+TGG 0.579229 4.2:+92806958 None:intergenic
AAAACTTTGCAAGAGCCAGA+TGG 0.582131 4.2:+92807361 None:intergenic
AACGAATACAACCCCAGTGG+TGG 0.585705 4.2:-92804612 MS.gene053226:CDS
AATATTGGCACCAAGAGGAT+GGG 0.586149 4.2:-92804991 MS.gene053226:CDS
GACAGGTTGGACGACAGCTA+AGG 0.586592 4.2:+92807287 None:intergenic
AGTACCTTCGCAACAAAGGA+AGG 0.587192 4.2:-92806942 MS.gene053226:CDS
AGAGAGGCAGAAACTGGAAG+AGG 0.587763 4.2:-92806473 MS.gene053226:CDS
AAAATGTGAAGAACTCAGCT+TGG 0.590276 4.2:-92804870 MS.gene053226:CDS
CAAACAGTATACCCACCACT+GGG 0.590617 4.2:+92804600 None:intergenic
GGGGAGTACCTTCGCAACAA+AGG 0.594476 4.2:-92806946 MS.gene053226:CDS
CTCCTCCAGCATCCTACTCA+AGG 0.596087 4.2:+92806783 None:intergenic
CAACTTAAGCGCAAGAGAGG+AGG 0.597370 4.2:-92804501 MS.gene053226:CDS
GATCAGTGAGTCTGAGATCG+AGG 0.600157 4.2:-92807571 MS.gene053226:CDS
AAGCAACTTAAGCGCAAGAG+AGG 0.605662 4.2:-92804504 MS.gene053226:CDS
CGACAGCTAAGGTCAAAGCC+GGG 0.609400 4.2:+92807298 None:intergenic
CATGCATCTGGAGTAGGCAA+AGG 0.611854 4.2:-92807417 MS.gene053226:CDS
AGAAGACTATGTCCTTGAGT+AGG 0.612892 4.2:-92806795 MS.gene053226:CDS
ACAGTTCAGAGATTTACGGT+TGG 0.615927 4.2:-92807008 MS.gene053226:CDS
GAACTTCAAAGAAAATAGGA+AGG 0.621964 4.2:-92804568 MS.gene053226:CDS
AGGTACTAACCGATCAAGAG+AGG 0.623269 4.2:-92806489 MS.gene053226:CDS
AAGATGATTATAATTGTCCA+GGG 0.627300 4.2:-92806975 MS.gene053226:CDS
CATGCAGCGTAAAGCTCGTG+AGG 0.627326 4.2:-92806611 MS.gene053226:CDS
TTGACAAGTATGCCTGTCCA+CGG 0.630837 4.2:+92807243 None:intergenic
AAACTACCAGAGAGAAAAGG+AGG 0.630982 4.2:-92805610 MS.gene053226:intron
TAATTGTCCAGGGTCGATTG+GGG 0.634670 4.2:-92806965 MS.gene053226:CDS
TGGTTTGAGACTAAACGTTG+TGG 0.637320 4.2:-92807063 MS.gene053226:CDS
GTCCTTGAGTAGGATGCTGG+AGG 0.639598 4.2:-92806785 MS.gene053226:CDS
GGGTTAAATGAAATGCTGAC+TGG 0.640070 4.2:-92805024 MS.gene053226:CDS
TTCGCAACAAAGGAAGGCTG+AGG 0.640972 4.2:-92806936 MS.gene053226:CDS
AAGCTCGTGAGGAGGTACGA+AGG 0.645630 4.2:-92806600 MS.gene053226:CDS
AAGAACGTATGAACAGCCAA+TGG 0.648751 4.2:+92807165 None:intergenic
CTACCAGAGAGAAAAGGAGG+AGG 0.652051 4.2:-92805607 MS.gene053226:intron
ACGAATACAACCCCAGTGGT+GGG 0.663205 4.2:-92804611 MS.gene053226:CDS
TCTTGGAGATCAAGATGATG+CGG 0.666276 4.2:-92805484 MS.gene053226:CDS
CAAAAGCTGAAGAAGGAATG+GGG 0.672943 4.2:-92804678 MS.gene053226:CDS
TCAAAGCAGAAATAGCATTG+TGG 0.673917 4.2:-92806884 MS.gene053226:CDS
AAACTAATATTGGCACCAAG+AGG 0.676823 4.2:-92804996 MS.gene053226:CDS
GCAGCGTAAAGCTCGTGAGG+AGG 0.682044 4.2:-92806608 MS.gene053226:CDS
CAGAGACCTAAACAAGCGTG+AGG 0.704526 4.2:-92806509 MS.gene053226:CDS
CTTGATGGATGGTAACTGCG+TGG 0.712841 4.2:-92807145 MS.gene053226:CDS
TACAGAGAATGATAACCATG+TGG 0.726744 4.2:-92804830 MS.gene053226:intron
AAACAGTATACCCACCACTG+GGG 0.786062 4.2:+92804601 None:intergenic
GTTAACGAATACAACCCCAG+TGG 0.812069 4.2:-92804615 MS.gene053226:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATCAATGTAATATATA+TGG - chr4.2:92806007-92806026 MS.gene053226:intron 10.0%
!! AAATAGTGTAATAATTAACA+TGG - chr4.2:92807344-92807363 MS.gene053226:CDS 15.0%
!!! AGTAACATTTCTTTTTATAT+AGG + chr4.2:92806825-92806844 None:intergenic 15.0%
!!! CAGTTAAAAATATTTGAAAT+GGG + chr4.2:92805696-92805715 None:intergenic 15.0%
!!! TTCAAATTTCTATTGTTTTA+GGG - chr4.2:92807052-92807071 MS.gene053226:CDS 15.0%
!!! TTTCAAATTTCTATTGTTTT+AGG - chr4.2:92807051-92807070 MS.gene053226:CDS 15.0%
!! AAATTTGAAAAAAATGAGAG+GGG + chr4.2:92807041-92807060 None:intergenic 20.0%
!! AGAAATTTGAAAAAAATGAG+AGG + chr4.2:92807043-92807062 None:intergenic 20.0%
!! GAAATTTGAAAAAAATGAGA+GGG + chr4.2:92807042-92807061 None:intergenic 20.0%
!! GCAGTTAAAAATATTTGAAA+TGG + chr4.2:92805697-92805716 None:intergenic 20.0%
!!! AAAAAAATGAGACATTTTTG+TGG + chr4.2:92805451-92805470 None:intergenic 20.0%
!!! CACTTTTTTATTCAAATCAA+GGG + chr4.2:92805873-92805892 None:intergenic 20.0%
!!! TCAAATTTCTATTGTTTTAG+GGG - chr4.2:92807053-92807072 MS.gene053226:CDS 20.0%
! AAAGCAGGAATTCAAATATA+AGG - chr4.2:92804646-92804665 MS.gene053226:CDS 25.0%
! AAATGAATCCCAACTTTAAT+TGG - chr4.2:92805921-92805940 MS.gene053226:intron 25.0%
! AAGATGATTATAATTGTCCA+GGG - chr4.2:92805122-92805141 MS.gene053226:intron 25.0%
! AATAGAAAGTTTGGAAGATA+TGG - chr4.2:92806682-92806701 MS.gene053226:intron 25.0%
! ACAAAGTGAAGAACAATAAT+GGG - chr4.2:92804591-92804610 MS.gene053226:CDS 25.0%
! ACATGGTAATATTGTTGTAT+TGG - chr4.2:92807361-92807380 MS.gene053226:CDS 25.0%
! AGAAAAGTTGAGTAATGAAT+TGG - chr4.2:92805534-92805553 MS.gene053226:CDS 25.0%
! ATGAATTGGATGAAAAAATG+AGG - chr4.2:92805548-92805567 MS.gene053226:CDS 25.0%
! ATGGAAATTGAAGAACTAAA+AGG - chr4.2:92806569-92806588 MS.gene053226:CDS 25.0%
! ATTTCAACTCTACATAAATG+AGG + chr4.2:92806047-92806066 None:intergenic 25.0%
! TACAAAGTGAAGAACAATAA+TGG - chr4.2:92804590-92804609 MS.gene053226:CDS 25.0%
! TGGAAATTGAAGAACTAAAA+GGG - chr4.2:92806570-92806589 MS.gene053226:CDS 25.0%
!! AAATCTTATTTCCTAAAGAG+AGG + chr4.2:92806967-92806986 None:intergenic 25.0%
!! ATTACACTATTTCTCTATTG+AGG + chr4.2:92807336-92807355 None:intergenic 25.0%
!! GTATTCGTTAACTTCTTTTA+AGG + chr4.2:92807474-92807493 None:intergenic 25.0%
!! TTCCATTTCCAATTTTTGTT+TGG + chr4.2:92806555-92806574 None:intergenic 25.0%
!! TTGCCTTATTGTATAGAATA+GGG - chr4.2:92805397-92805416 MS.gene053226:CDS 25.0%
!! TTTGCCTTATTGTATAGAAT+AGG - chr4.2:92805396-92805415 MS.gene053226:CDS 25.0%
!!! AAAAGCTTTTGATTATTGTG+AGG - chr4.2:92805984-92806003 MS.gene053226:intron 25.0%
!!! GCACTTTTTTATTCAAATCA+AGG + chr4.2:92805874-92805893 None:intergenic 25.0%
AAAAAAGGATTGGAATTCCA+TGG - chr4.2:92805057-92805076 MS.gene053226:intron 30.0%
ACTAGATGCCAAACAAAAAT+TGG - chr4.2:92806544-92806563 MS.gene053226:CDS 30.0%
ACTGATGATTCAAAGTCTTA+AGG + chr4.2:92806216-92806235 None:intergenic 30.0%
AGAAACCATATGAAGAGTTA+AGG - chr4.2:92804558-92804577 MS.gene053226:CDS 30.0%
AGAAGTGATCACTTATATTG+TGG - chr4.2:92807562-92807581 MS.gene053226:CDS 30.0%
ATAAGCAAATCACATGATTC+TGG - chr4.2:92804878-92804897 MS.gene053226:CDS 30.0%
GAAACCATATGAAGAGTTAA+GGG - chr4.2:92804559-92804578 MS.gene053226:CDS 30.0%
GAACTTCAAAGAAAATAGGA+AGG - chr4.2:92807529-92807548 MS.gene053226:CDS 30.0%
GAAGATGATTATAATTGTCC+AGG - chr4.2:92805121-92805140 MS.gene053226:intron 30.0%
GAATTTAACGCTTATTGTCA+AGG - chr4.2:92806712-92806731 MS.gene053226:intron 30.0%
GATTTGAATAACAATGTCCT+TGG - chr4.2:92805844-92805863 MS.gene053226:intron 30.0%
GGAAGACAAAATAGAAAGTT+TGG - chr4.2:92806673-92806692 MS.gene053226:intron 30.0%
TAATATCAATCTCATTTGCC+AGG + chr4.2:92805243-92805262 None:intergenic 30.0%
TGAAGAATACACGAAGATAA+AGG + chr4.2:92806870-92806889 None:intergenic 30.0%
TGCCAAACAAAAATTGGAAA+TGG - chr4.2:92806550-92806569 MS.gene053226:CDS 30.0%
TGCGGCTATTAAGAAAAAAA+TGG - chr4.2:92806631-92806650 MS.gene053226:intron 30.0%
TGTGGAACTTCAAAGAAAAT+AGG - chr4.2:92807525-92807544 MS.gene053226:CDS 30.0%
TTATAGACTTCAACAATGAC+TGG - chr4.2:92804978-92804997 MS.gene053226:CDS 30.0%
TTCAAGATAACCAACTAACA+AGG - chr4.2:92806886-92806905 MS.gene053226:CDS 30.0%
TTCATTTAAAGAGAGTCAGT+AGG + chr4.2:92805908-92805927 None:intergenic 30.0%
TTCCCCTATTCTATACAATA+AGG + chr4.2:92805403-92805422 None:intergenic 30.0%
TTCTCTGTAACCACTTTAAA+AGG + chr4.2:92807256-92807275 None:intergenic 30.0%
! AGAAGAAAATCTTTTCTTGC+AGG + chr4.2:92807161-92807180 None:intergenic 30.0%
! ATTTGCTAAGTACAAACCAT+TGG - chr4.2:92804916-92804935 MS.gene053226:CDS 30.0%
! GCATTTTATATATTAGTGCG+TGG - chr4.2:92806096-92806115 MS.gene053226:intron 30.0%
! TCTCTGTAACCACTTTAAAA+GGG + chr4.2:92807255-92807274 None:intergenic 30.0%
! TGCCTTATTGTATAGAATAG+GGG - chr4.2:92805398-92805417 MS.gene053226:CDS 30.0%
! TTTTCATAACCAAGTGAGTA+GGG + chr4.2:92806384-92806403 None:intergenic 30.0%
!!! AGCACATCTGGTTTTTTTTA+TGG + chr4.2:92806153-92806172 None:intergenic 30.0%
!!! CAAATTTTTTGCAAGGACAA+TGG + chr4.2:92805747-92805766 None:intergenic 30.0%
!!! GACAGATCAAATTTTTTGCA+AGG + chr4.2:92805754-92805773 None:intergenic 30.0%
!!! TCATTTTTTTGTCAGAGTCA+AGG - chr4.2:92805461-92805480 MS.gene053226:CDS 30.0%
AAAATGTGAAGAACTCAGCT+TGG - chr4.2:92807227-92807246 MS.gene053226:CDS 35.0%
AAACTAATATTGGCACCAAG+AGG - chr4.2:92807101-92807120 MS.gene053226:CDS 35.0%
AAATAGCATTGTGGAAAACC+TGG - chr4.2:92805222-92805241 MS.gene053226:intron 35.0%
AACGTTGTGGAAAAAAGGAT+TGG - chr4.2:92805047-92805066 MS.gene053226:intron 35.0%
AATCTATGCACCTTGTTAGT+TGG + chr4.2:92806899-92806918 None:intergenic 35.0%
ACAAAAGCTGAAGAAGGAAT+GGG - chr4.2:92807418-92807437 MS.gene053226:CDS 35.0%
ACACGAAGATAAAGGTTAGA+AGG + chr4.2:92806862-92806881 None:intergenic 35.0%
ACTTCAACAATGACTGGAAT+GGG - chr4.2:92804984-92805003 MS.gene053226:CDS 35.0%
AGCATGTAAAGGTTAGAAAG+TGG + chr4.2:92806186-92806205 None:intergenic 35.0%
ATCTCAACAAGATGCAGTAT+AGG - chr4.2:92805272-92805291 MS.gene053226:intron 35.0%
ATTTGATCTGTCTTTCTCTG+TGG - chr4.2:92805762-92805781 MS.gene053226:CDS 35.0%
CTTAAACAAGATCCTTCAGT+TGG - chr4.2:92806514-92806533 MS.gene053226:CDS 35.0%
GAAACTACAAAAGCTGAAGA+AGG - chr4.2:92807412-92807431 MS.gene053226:CDS 35.0%
GACTAAACGTTGTGGAAAAA+AGG - chr4.2:92805042-92805061 MS.gene053226:intron 35.0%
GATCAACCAAGAACATTAGT+AGG + chr4.2:92805791-92805810 None:intergenic 35.0%
GATTTGACTAACAATGTCGT+TGG - chr4.2:92805813-92805832 MS.gene053226:CDS 35.0%
GCATGTAAAGGTTAGAAAGT+GGG + chr4.2:92806185-92806204 None:intergenic 35.0%
GTTCTGCTGTGAATATATTG+TGG - chr4.2:92807000-92807019 MS.gene053226:CDS 35.0%
TACAAAAGCTGAAGAAGGAA+TGG - chr4.2:92807417-92807436 MS.gene053226:CDS 35.0%
TACAGAGAATGATAACCATG+TGG - chr4.2:92807267-92807286 MS.gene053226:CDS 35.0%
TCAAAGCAGAAATAGCATTG+TGG - chr4.2:92805213-92805232 MS.gene053226:intron 35.0%
TCAGTTGAAGACATTCACAA+TGG + chr4.2:92806456-92806475 None:intergenic 35.0%
TGATTCTGGATACTTGCAAA+AGG - chr4.2:92804892-92804911 MS.gene053226:CDS 35.0%
TTCTAACCTTTACATGCTTG+AGG - chr4.2:92806188-92806207 MS.gene053226:intron 35.0%
TTGAAGACATTCACAATGGA+TGG + chr4.2:92806452-92806471 None:intergenic 35.0%
! AAACAGAAGCACAAAACAGA+AGG - chr4.2:92804709-92804728 MS.gene053226:CDS 35.0%
! ACTGGTGCCAAAACTAATAT+TGG - chr4.2:92807091-92807110 MS.gene053226:CDS 35.0%
! AGAACAATAATGGGACACTT+AGG - chr4.2:92804600-92804619 MS.gene053226:CDS 35.0%
! AGATTTTCTTCTGATGAAGC+TGG - chr4.2:92807169-92807188 MS.gene053226:CDS 35.0%
! AGCTTTTAGCATATAGACTC+TGG + chr4.2:92805971-92805990 None:intergenic 35.0%
! CAACTGAAGGATCTTGTTTA+AGG + chr4.2:92806516-92806535 None:intergenic 35.0%
! CTTCACAATGCTTTTGTTGA+AGG - chr4.2:92805346-92805365 MS.gene053226:CDS 35.0%
! CTTTTCATAACCAAGTGAGT+AGG + chr4.2:92806385-92806404 None:intergenic 35.0%
! GATTTTCTTCTGATGAAGCT+GGG - chr4.2:92807170-92807189 MS.gene053226:CDS 35.0%
! GCTTTTAGCATATAGACTCT+GGG + chr4.2:92805970-92805989 None:intergenic 35.0%
! TCTTATTTCCTAAAGAGAGG+TGG + chr4.2:92806964-92806983 None:intergenic 35.0%
! TTTTTCTTTCCCGAGCAATA+CGG + chr4.2:92804629-92804648 None:intergenic 35.0%
!!! CTTGGTGCCAATATTAGTTT+TGG + chr4.2:92807101-92807120 None:intergenic 35.0%
AAAACAGAAGGCAAACCATC+TGG - chr4.2:92804721-92804740 MS.gene053226:intron 40.0%
AAAACTTTGCAAGAGCCAGA+TGG + chr4.2:92804739-92804758 None:intergenic 40.0%
AAACTACCAGAGAGAAAAGG+AGG - chr4.2:92806487-92806506 MS.gene053226:CDS 40.0%
AAATGAGGAAGCTTGATACC+TGG - chr4.2:92805563-92805582 MS.gene053226:CDS 40.0%
AAGAACGTATGAACAGCCAA+TGG + chr4.2:92804935-92804954 None:intergenic 40.0%
AATATTGGCACCAAGAGGAT+GGG - chr4.2:92807106-92807125 MS.gene053226:CDS 40.0%
ACAGTTCAGAGATTTACGGT+TGG - chr4.2:92805089-92805108 MS.gene053226:intron 40.0%
AGAAGACTATGTCCTTGAGT+AGG - chr4.2:92805302-92805321 MS.gene053226:intron 40.0%
AGGCATTCACAAAAACCTTC+TGG + chr4.2:92807141-92807160 None:intergenic 40.0%
ATAATTGTCCAGGGTCGATT+GGG - chr4.2:92805131-92805150 MS.gene053226:intron 40.0%
ATGATGAACTACAGGAAGCT+CGG - chr4.2:92806747-92806766 MS.gene053226:intron 40.0%
ATTCAAATCAAGGGCAACCA+AGG + chr4.2:92805864-92805883 None:intergenic 40.0%
CAAAAGCTGAAGAAGGAATG+GGG - chr4.2:92807419-92807438 MS.gene053226:CDS 40.0%
CAGGACAGTTCAGAGATTTA+CGG - chr4.2:92805085-92805104 MS.gene053226:intron 40.0%
CAGTTCAGAGATTTACGGTT+GGG - chr4.2:92805090-92805109 MS.gene053226:intron 40.0%
CCAAAGCAATGATGAACTAC+AGG - chr4.2:92806739-92806758 MS.gene053226:intron 40.0%
CCTGTAGTTCATCATTGCTT+TGG + chr4.2:92806742-92806761 None:intergenic 40.0%
CTGCAAGTCATGAAACATCT+TGG - chr4.2:92806596-92806615 MS.gene053226:CDS 40.0%
GACTTCAACAATGACTGGAA+TGG - chr4.2:92804983-92805002 MS.gene053226:CDS 40.0%
GATTATCTCCACCTCTCTTT+AGG - chr4.2:92806953-92806972 MS.gene053226:CDS 40.0%
GCTTTATGGTACATACCACA+TGG + chr4.2:92807285-92807304 None:intergenic 40.0%
GGAAGAGATGAATTCAGAGT+TGG - chr4.2:92806652-92806671 MS.gene053226:intron 40.0%
GGGGAAAAAAACACTTGCAT+TGG - chr4.2:92805417-92805436 MS.gene053226:CDS 40.0%
GGGTTAAATGAAATGCTGAC+TGG - chr4.2:92807073-92807092 MS.gene053226:CDS 40.0%
GTGAATGTCTTCAACTGATG+TGG - chr4.2:92806458-92806477 MS.gene053226:intron 40.0%
GTGGAAGGCCAATTAAAGTT+GGG + chr4.2:92805932-92805951 None:intergenic 40.0%
GTTCATACGTTCTTGATGGA+TGG - chr4.2:92804941-92804960 MS.gene053226:CDS 40.0%
TAATATTGGCACCAAGAGGA+TGG - chr4.2:92807105-92807124 MS.gene053226:CDS 40.0%
TACGCAAAAAACACAGAGCA+TGG + chr4.2:92807307-92807326 None:intergenic 40.0%
TAGCTGATGAGAATGTCTTC+AGG - chr4.2:92806335-92806354 MS.gene053226:intron 40.0%
TATAATTGTCCAGGGTCGAT+TGG - chr4.2:92805130-92805149 MS.gene053226:intron 40.0%
TCACAAAAACCTTCTGGTCA+AGG + chr4.2:92807135-92807154 None:intergenic 40.0%
TCCAAACTACCAGAGAGAAA+AGG - chr4.2:92806484-92806503 MS.gene053226:CDS 40.0%
TCTTGGAGATCAAGATGATG+CGG - chr4.2:92806613-92806632 MS.gene053226:CDS 40.0%
TGGTCTCCTACTAATGTTCT+TGG - chr4.2:92805782-92805801 MS.gene053226:CDS 40.0%
TGTGGAAGGCCAATTAAAGT+TGG + chr4.2:92805933-92805952 None:intergenic 40.0%
TTAGTACCTCACGCTTGTTT+AGG + chr4.2:92805597-92805616 None:intergenic 40.0%
TTCTGATGAAGCTGGGATAA+AGG - chr4.2:92807177-92807196 MS.gene053226:CDS 40.0%
! AAACACAGAGCATGGCTTTA+TGG + chr4.2:92807299-92807318 None:intergenic 40.0%
! ATTGATTCCTGGAGTCTTTC+TGG + chr4.2:92806285-92806304 None:intergenic 40.0%
! TCCAAGTTGAGAACTACGTT+TGG - chr4.2:92804831-92804850 MS.gene053226:CDS 40.0%
! TCCTTTTCTCTCTGGTAGTT+TGG + chr4.2:92806488-92806507 None:intergenic 40.0%
! TGGCTCTTGCAAAGTTTTTG+AGG - chr4.2:92804741-92804760 MS.gene053226:intron 40.0%
! TGGTTTGAGACTAAACGTTG+TGG - chr4.2:92805034-92805053 MS.gene053226:intron 40.0%
!! TAGACTCTGGGACAAATTAG+CGG + chr4.2:92805958-92805977 None:intergenic 40.0%
!!! CTAGTTGCTTTTCCAACTGA+AGG + chr4.2:92806529-92806548 None:intergenic 40.0%
AAACAGTATACCCACCACTG+GGG + chr4.2:92807499-92807518 None:intergenic 45.0%
AAAGGTTTGCCCTACTCACT+TGG - chr4.2:92806372-92806391 MS.gene053226:intron 45.0%
AAGCAACTTAAGCGCAAGAG+AGG - chr4.2:92807593-92807612 MS.gene053226:CDS 45.0%
AAGGCTCCTCAAGCATGTAA+AGG + chr4.2:92806197-92806216 None:intergenic 45.0%
ACGTAGTTCTCAACTTGGAC+AGG + chr4.2:92804830-92804849 None:intergenic 45.0%
ACTGGAAGAGGACAAGAAGA+AGG - chr4.2:92805636-92805655 MS.gene053226:intron 45.0%
ACTTAGGTGTCCGTATTGCT+CGG - chr4.2:92804616-92804635 MS.gene053226:CDS 45.0%
AGCTATCTTCTGCTCCTTTG+AGG + chr4.2:92806320-92806339 None:intergenic 45.0%
AGGTACTAACCGATCAAGAG+AGG - chr4.2:92805608-92805627 MS.gene053226:intron 45.0%
AGTACCTTCGCAACAAAGGA+AGG - chr4.2:92805155-92805174 MS.gene053226:intron 45.0%
AGTTCTCAACTTGGACAGGT+TGG + chr4.2:92804826-92804845 None:intergenic 45.0%
ATGCAAGCGAGCTTGAGAAA+TGG - chr4.2:92805014-92805033 MS.gene053226:CDS 45.0%
ATTCCTGGAGTCTTTCTGGA+AGG + chr4.2:92806281-92806300 None:intergenic 45.0%
CAAACAGTATACCCACCACT+GGG + chr4.2:92807500-92807519 None:intergenic 45.0%
CAGGAATCAATCACTCCAGT+TGG - chr4.2:92806294-92806313 MS.gene053226:intron 45.0%
CAGTTTCTGCCTCTCTTGAT+CGG + chr4.2:92805620-92805639 None:intergenic 45.0%
CCAGCCCTTAACTCTTCATA+TGG + chr4.2:92804566-92804585 None:intergenic 45.0%
CCATATGAAGAGTTAAGGGC+TGG - chr4.2:92804563-92804582 MS.gene053226:CDS 45.0%
CTGTCGAGCTTTGCTCTTTA+TGG - chr4.2:92807200-92807219 MS.gene053226:CDS 45.0%
GCCAAACGTAGTTCTCAACT+TGG + chr4.2:92804835-92804854 None:intergenic 45.0%
GGCTGTTCATACGTTCTTGA+TGG - chr4.2:92804937-92804956 MS.gene053226:CDS 45.0%
GGTGGAGATAATCTTCATGC+AGG + chr4.2:92806946-92806965 None:intergenic 45.0%
GTTAACGAATACAACCCCAG+TGG - chr4.2:92807482-92807501 MS.gene053226:CDS 45.0%
TAATTGTCCAGGGTCGATTG+GGG - chr4.2:92805132-92805151 MS.gene053226:intron 45.0%
TATGTCCTTGAGTAGGATGC+TGG - chr4.2:92805309-92805328 MS.gene053226:intron 45.0%
TTGACAAGTATGCCTGTCCA+CGG + chr4.2:92804857-92804876 None:intergenic 45.0%
TTGCTCGGGAAAGAAAAAGC+AGG - chr4.2:92804631-92804650 MS.gene053226:CDS 45.0%
TTGGAATTCCATGGACTTGC+AGG - chr4.2:92805066-92805085 MS.gene053226:intron 45.0%
! ATCTGGAGTAGGCAAAGGTT+CGG - chr4.2:92804685-92804704 MS.gene053226:CDS 45.0%
! CAACTGGAGTGATTGATTCC+TGG + chr4.2:92806296-92806315 None:intergenic 45.0%
! GGGATATCAGAAAGCACATC+TGG + chr4.2:92806165-92806184 None:intergenic 45.0%
! TGAGGAGGTACGAAGGATAT+TGG - chr4.2:92805504-92805523 MS.gene053226:CDS 45.0%
!! AGACTCTGGGACAAATTAGC+GGG + chr4.2:92805957-92805976 None:intergenic 45.0%
!! AGCTTGGCACCCTTTTAAAG+TGG - chr4.2:92807243-92807262 MS.gene053226:CDS 45.0%
!! CAGGCTTGTTGAAGAGCAAA+AGG - chr4.2:92806354-92806373 MS.gene053226:intron 45.0%
!! CAGTGGTGGGTATACTGTTT+GGG - chr4.2:92807499-92807518 MS.gene053226:CDS 45.0%
AACGAATACAACCCCAGTGG+TGG - chr4.2:92807485-92807504 MS.gene053226:CDS 50.0%
ACGAATACAACCCCAGTGGT+GGG - chr4.2:92807486-92807505 MS.gene053226:CDS 50.0%
ACGACAGCTAAGGTCAAAGC+CGG + chr4.2:92804803-92804822 None:intergenic 50.0%
AGAGAGGCAGAAACTGGAAG+AGG - chr4.2:92805624-92805643 MS.gene053226:intron 50.0%
CAACTTAAGCGCAAGAGAGG+AGG - chr4.2:92807596-92807615 MS.gene053226:CDS 50.0%
CAGAGACCTAAACAAGCGTG+AGG - chr4.2:92805588-92805607 MS.gene053226:CDS 50.0%
CCAAACAGTATACCCACCAC+TGG + chr4.2:92807501-92807520 None:intergenic 50.0%
CGAGCTTTGCTCTTTATGGC+AGG - chr4.2:92807204-92807223 MS.gene053226:CDS 50.0%
CGATCAAGAGAGGCAGAAAC+TGG - chr4.2:92805618-92805637 MS.gene053226:intron 50.0%
CTACCAGAGAGAAAAGGAGG+AGG - chr4.2:92806490-92806509 MS.gene053226:CDS 50.0%
CTTAGGTGTCCGTATTGCTC+GGG - chr4.2:92804617-92804636 MS.gene053226:CDS 50.0%
CTTGTTTAGGTCTCTGCTCC+AGG + chr4.2:92805584-92805603 None:intergenic 50.0%
GATCTGTTGCAGCATGCATC+TGG - chr4.2:92804668-92804687 MS.gene053226:CDS 50.0%
GGTATACTGTTTGGGAGCTG+TGG - chr4.2:92807507-92807526 MS.gene053226:CDS 50.0%
TCAGCCTTCCTTTGTTGCGA+AGG + chr4.2:92805162-92805181 None:intergenic 50.0%
TGAACTGTCCTGCAAGTCCA+TGG + chr4.2:92805077-92805096 None:intergenic 50.0%
TGTCCTTCCAGAAAGACTCC+AGG - chr4.2:92806275-92806294 MS.gene053226:intron 50.0%
TTCGCAACAAAGGAAGGCTG+AGG - chr4.2:92805161-92805180 MS.gene053226:intron 50.0%
TTGAGAACTACGTTTGGCCG+TGG - chr4.2:92804837-92804856 MS.gene053226:CDS 50.0%
! ATCACTCCAGTTGGCCTCAA+AGG - chr4.2:92806303-92806322 MS.gene053226:intron 50.0%
! CATGCATCTGGAGTAGGCAA+AGG - chr4.2:92804680-92804699 MS.gene053226:CDS 50.0%
! CTTGATGGATGGTAACTGCG+TGG - chr4.2:92804952-92804971 MS.gene053226:CDS 50.0%
! GATCAGTGAGTCTGAGATCG+AGG - chr4.2:92804526-92804545 MS.gene053226:CDS 50.0%
! TTGCAGCATGCATCTGGAGT+AGG - chr4.2:92804674-92804693 MS.gene053226:CDS 50.0%
!! ACAAATTAGCGGGCTGTGGA+AGG + chr4.2:92805947-92805966 None:intergenic 50.0%
!! CCAGTGGTGGGTATACTGTT+TGG - chr4.2:92807498-92807517 MS.gene053226:CDS 50.0%
AACTACGTTTGGCCGTGGAC+AGG - chr4.2:92804842-92804861 MS.gene053226:CDS 55.0%
CATGCAGCGTAAAGCTCGTG+AGG - chr4.2:92805486-92805505 MS.gene053226:CDS 55.0%
CGACAGCTAAGGTCAAAGCC+GGG + chr4.2:92804802-92804821 None:intergenic 55.0%
CTCCTCCAGCATCCTACTCA+AGG + chr4.2:92805317-92805336 None:intergenic 55.0%
GATGGGAGACCTTGACCAGA+AGG - chr4.2:92807123-92807142 MS.gene053226:CDS 55.0%
GTCAAGGTCTCCCATCCTCT+TGG + chr4.2:92807119-92807138 None:intergenic 55.0%
GTCCTTGAGTAGGATGCTGG+AGG - chr4.2:92805312-92805331 MS.gene053226:intron 55.0%
! AAGCTCGTGAGGAGGTACGA+AGG - chr4.2:92805497-92805516 MS.gene053226:CDS 55.0%
! AGGCCTCCTCCTTTTCTCTC+TGG + chr4.2:92806496-92806515 None:intergenic 55.0%
! GACAGGTTGGACGACAGCTA+AGG + chr4.2:92804813-92804832 None:intergenic 55.0%
!! GGGGAGTACCTTCGCAACAA+AGG - chr4.2:92805151-92805170 MS.gene053226:intron 55.0%
!! TCTGCTCCTTTGAGGCCAAC+TGG + chr4.2:92806312-92806331 None:intergenic 55.0%
!! TGGGACAAATTAGCGGGCTG+TGG + chr4.2:92805951-92805970 None:intergenic 55.0%
AGCAGACCAAGTACCTCGCC+CGG - chr4.2:92804781-92804800 MS.gene053226:intron 60.0%
AGGTACTCCCCAATCGACCC+TGG + chr4.2:92805142-92805161 None:intergenic 60.0%
GCAGCGTAAAGCTCGTGAGG+AGG - chr4.2:92805489-92805508 MS.gene053226:CDS 60.0%
! TCAAAGCCGGGCGAGGTACT+TGG + chr4.2:92804790-92804809 None:intergenic 60.0%
GCTAAGGTCAAAGCCGGGCG+AGG + chr4.2:92804797-92804816 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 92804497 92807622 92804497 ID=MS.gene053226
chr4.2 mRNA 92804497 92807622 92804497 ID=MS.gene053226.t1;Parent=MS.gene053226
chr4.2 exon 92806752 92807622 92806752 ID=MS.gene053226.t1.exon1;Parent=MS.gene053226.t1
chr4.2 CDS 92806752 92807622 92806752 ID=cds.MS.gene053226.t1;Parent=MS.gene053226.t1
chr4.2 exon 92806462 92806643 92806462 ID=MS.gene053226.t1.exon2;Parent=MS.gene053226.t1
chr4.2 CDS 92806462 92806643 92806462 ID=cds.MS.gene053226.t1;Parent=MS.gene053226.t1
chr4.2 exon 92805744 92805833 92805744 ID=MS.gene053226.t1.exon3;Parent=MS.gene053226.t1
chr4.2 CDS 92805744 92805833 92805744 ID=cds.MS.gene053226.t1;Parent=MS.gene053226.t1
chr4.2 exon 92805335 92805622 92805335 ID=MS.gene053226.t1.exon4;Parent=MS.gene053226.t1
chr4.2 CDS 92805335 92805622 92805335 ID=cds.MS.gene053226.t1;Parent=MS.gene053226.t1
chr4.2 exon 92804831 92805046 92804831 ID=MS.gene053226.t1.exon5;Parent=MS.gene053226.t1
chr4.2 CDS 92804831 92805046 92804831 ID=cds.MS.gene053226.t1;Parent=MS.gene053226.t1
chr4.2 exon 92804497 92804730 92804497 ID=MS.gene053226.t1.exon6;Parent=MS.gene053226.t1
chr4.2 CDS 92804497 92804730 92804497 ID=cds.MS.gene053226.t1;Parent=MS.gene053226.t1
Gene Sequence

>MS.gene053226

ATGGACTACAGCTCTGAAGAAGAGTCAGAGATCAGTGAGTCTGAGATCGAGGAATACTCTGAGAAACCATATGAAGAGTTAAGGGCTGGTAAATACAAAGTGAAGAACAATAATGGGACACTTAGGTGTCCGTATTGCTCGGGAAAGAAAAAGCAGGAATTCAAATATAAGGATCTGTTGCAGCATGCATCTGGAGTAGGCAAAGGTTCGGCAAACAGAAGCACAAAACAGAAGGCAAACCATCTGGCTCTTGCAAAGTTTTTGAGGACTGACTTAGCAAATGAAGCAGACCAAGTACCTCGCCCGGCTTTGACCTTAGCTGTCGTCCAACCTGTCCAAGTTGAGAACTACGTTTGGCCGTGGACAGGCATACTTGTCAATATAAGCAAATCACATGATTCTGGATACTTGCAAAAGGAATTTGCTAAGTACAAACCATTGGCTGTTCATACGTTCTTGATGGATGGTAACTGCGTGGCTGTTATAGACTTCAACAATGACTGGAATGGGTTTATGAATGCAAGCGAGCTTGAGAAATGGTTTGAGACTAAACGTTGTGGAAAAAAGGATTGGAATTCCATGGACTTGCAGGACAGTTCAGAGATTTACGGTTGGGTTGCACGTGAAGATGATTATAATTGTCCAGGGTCGATTGGGGAGTACCTTCGCAACAAAGGAAGGCTGAGGACAATTTCAGATATAGTTCAAGAAGCATCTCAAAGCAGAAATAGCATTGTGGAAAACCTGGCAAATGAGATTGATATTACTAATGAAAATCTCAACAAGATGCAGTATAGGTATAATGAGAAGACTATGTCCTTGAGTAGGATGCTGGAGGAGAAAGACAAACTTCACAATGCTTTTGTTGAAGGTTTGTATAATTTCTGTTATAATCTGATTTTGCCTTATTGTATAGAATAGGGGAAAAAAACACTTGCATTGGTTTTAATGCCACAAAAATGTCTCATTTTTTTGTCAGAGTCAAGGAGCATGCAGCGTAAAGCTCGTGAGGAGGTACGAAGGATATTGGAAGAACAAGAAAAGTTGAGTAATGAATTGGATGAAAAAATGAGGAAGCTTGATACCTGGAGCAGAGACCTAAACAAGCGTGAGGTACTAACCGATCAAGAGAGGCAGAAACTGGAAGAGGACAAGAAGAAGGTAATGTATAATACACTTTTAGCAATCAGTATATGCCCATTTCAAATATTTTTAACTGCTAACTGCTAATCTTACGCTCTTATCTACCATTGTCCTTGCAAAAAATTTGATCTGTCTTTCTCTGTGGTCTCCTACTAATGTTCTTGGTTGATCTTGATTTGACTAACAATGTCGTTGGTTGCTCTTGATTTGAATAACAATGTCCTTGGTTGCCCTTGATTTGAATAAAAAAGTGCTTTATTTTGATCCTACTGACTCTCTTTAAATGAATCCCAACTTTAATTGGCCTTCCACAGCCCGCTAATTTGTCCCAGAGTCTATATGCTAAAAGCTTTTGATTATTGTGAGGAAATATCAATGTAATATATATGGTTTTAGTTTAAATACCTCATTTATGTAGAGTTGAAATTTTGTTATAAAGATTTGTATTTTCATATAGCATTTTATATATTAGTGCGTGGATTTTTTCATTTAAAAAAAAACTTTTAAAATCCATAAAAAAAACCAGATGTGCTTTCTGATATCCCACTTTCTAACCTTTACATGCTTGAGGAGCCTTAAGACTTTGAATCATCAGTTTTTACATGTGCTTTCACAAAATTCTAATAGTACGTCTTTGTCCTTCCAGAAAGACTCCAGGAATCAATCACTCCAGTTGGCCTCAAAGGAGCAGAAGATAGCTGATGAGAATGTCTTCAGGCTTGTTGAAGAGCAAAAGGTTTGCCCTACTCACTTGGTTATGAAAAGACAATACTACAGTAGTGTATGTTGTTTATCACTTATCAATGTTACCATCCATTGTGAATGTCTTCAACTGATGTGGATTTCCAAACTACCAGAGAGAAAAGGAGGAGGCCTTAAACAAGATCCTTCAGTTGGAAAAGCAACTAGATGCCAAACAAAAATTGGAAATGGAAATTGAAGAACTAAAAGGGAAACTGCAAGTCATGAAACATCTTGGAGATCAAGATGATGCGGCTATTAAGAAAAAAATGGAAGAGATGAATTCAGAGTTGGAAGACAAAATAGAAAGTTTGGAAGATATGGAGTCTATGAATTTAACGCTTATTGTCAAGGAGCGCCAAAGCAATGATGAACTACAGGAAGCTCGGAAAGAATTAATAGAAGTACGATCTCATTTATTTTCTCTCAATTGTTTTTTATCCTATATAAAAAGAAATGTTACTCATACTTGTTGCATCCTTCTAACCTTTATCTTCGTGTATTCTTCAAGATAACCAACTAACAAGGTGCATAGATTTCTTCATGCTATGCTGTAAAAGTACCTGCATGAAGATTATCTCCACCTCTCTTTAGGAAATAAGATTTTTGATATTTTGTTGTTCTGCTGTGAATATATTGTGGAGACTAAAGTTGATACCCCTCTCATTTTTTTCAAATTTCTATTGTTTTAGGGGTTAAATGAAATGCTGACTGGTGCCAAAACTAATATTGGCACCAAGAGGATGGGAGACCTTGACCAGAAGGTTTTTGTGAATGCCTGCAAGAAAAGATTTTCTTCTGATGAAGCTGGGATAAAGGCTGTCGAGCTTTGCTCTTTATGGCAGGAAAATGTGAAGAACTCAGCTTGGCACCCTTTTAAAGTGGTTACAGAGAATGATAACCATGTGGTATGTACCATAAAGCCATGCTCTGTGTTTTTTGCGTAGCTAAGCCTCAATAGAGAAATAGTGTAATAATTAACATGGTAATATTGTTGTATTGGCACAGTCAGTTATAGATGAGAAAGATGAGAAACTACAAAAGCTGAAGAAGGAATGGGGAGACGAGATATATTCAGCTGTTGTAACAGCCTTAAAAGAAGTTAACGAATACAACCCCAGTGGTGGGTATACTGTTTGGGAGCTGTGGAACTTCAAAGAAAATAGGAAGGCAACACTGAAAGAAGTGATCACTTATATTGTGGATCACATGAAGCAACTTAAGCGCAAGAGAGGAGGATAG

Protein sequence

>MS.gene053226.t1

MDYSSEEESEISESEIEEYSEKPYEELRAGKYKVKNNNGTLRCPYCSGKKKQEFKYKDLLQHASGVGKGSANRSTKQKANHLALAKFLRTDLANEADQVPRPALTLAVVQPVQVENYVWPWTGILVNISKSHDSGYLQKEFAKYKPLAVHTFLMDGNCVAVIDFNNDWNGFMNASELEKWFETKRCGKKDWNSMDLQDSSEIYGWVAREDDYNCPGSIGEYLRNKGRLRTISDIVQEASQSRNSIVENLANEIDITNENLNKMQYRYNEKTMSLSRMLEEKDKLHNAFVEESRSMQRKAREEVRRILEEQEKLSNELDEKMRKLDTWSRDLNKREVLTDQERQKLEEDKKKKDSRNQSLQLASKEQKIADENVFRLVEEQKREKEEALNKILQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDQDDAAIKKKMEEMNSELEDKIESLEDMESMNLTLIVKERQSNDELQEARKELIEGLNEMLTGAKTNIGTKRMGDLDQKVFVNACKKRFSSDEAGIKAVELCSLWQENVKNSAWHPFKVVTENDNHVSVIDEKDEKLQKLKKEWGDEIYSAVVTALKEVNEYNPSGGYTVWELWNFKENRKATLKEVITYIVDHMKQLKRKRGG