Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35513.t1 | KEH17837.1 | 97.8 | 184 | 4 | 0 | 1 | 184 | 37 | 220 | 8.50E-95 | 356.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35513.t1 | A0A072TK62 | 97.8 | 184 | 4 | 0 | 1 | 184 | 37 | 220 | 6.2e-95 | 356.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051926 | MS.gene35513 | 0.800487 | 1.41E-48 | -1.69E-46 |
MS.gene055701 | MS.gene35513 | -0.8161 | 6.58E-52 | -1.69E-46 |
MS.gene057156 | MS.gene35513 | 0.858893 | 6.03E-63 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35513.t1 | MTR_8g006800 | 97.826 | 184 | 4 | 0 | 1 | 184 | 37 | 220 | 3.64e-131 | 367 |
MS.gene35513.t1 | MTR_2g087760 | 96.739 | 184 | 6 | 0 | 1 | 184 | 1 | 184 | 3.84e-129 | 360 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35513.t1 | AT1G26750 | 52.604 | 192 | 83 | 2 | 1 | 184 | 1 | 192 | 1.67e-59 | 184 |
Find 51 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAACCCTTCACGAGCTTTC+TGG | 0.167713 | 2.3:+12040422 | None:intergenic |
GTCTCGATTATTTGCCTTAA+GGG | 0.274503 | 2.3:-12039034 | MS.gene35513:CDS |
CGTCTCGATTATTTGCCTTA+AGG | 0.298656 | 2.3:-12039035 | MS.gene35513:CDS |
GAGCCAAACGGGTTCGGCCT+TGG | 0.350031 | 2.3:+12040398 | None:intergenic |
CTTCACAAGTTCACGTATGC+TGG | 0.350600 | 2.3:+12038690 | None:intergenic |
GGCTTTGAGCCAAACGGGTT+CGG | 0.354407 | 2.3:+12040392 | None:intergenic |
GAGGCAGTTTCTTCCCTTGA+AGG | 0.376685 | 2.3:+12038788 | None:intergenic |
AGAGATTCGGACGAGATAAT+TGG | 0.381238 | 2.3:-12038645 | MS.gene35513:CDS |
TGGCCAAGGCCGAACCCGTT+TGG | 0.390787 | 2.3:-12040401 | MS.gene35513:CDS |
AAGCAAATTGCGCGCCTTCA+AGG | 0.391379 | 2.3:-12038802 | MS.gene35513:CDS |
TCCTTGACAGGACAAGGAAA+TGG | 0.403614 | 2.3:+12038760 | None:intergenic |
ACAGGACAAGGAAATGGGTT+TGG | 0.408987 | 2.3:+12038766 | None:intergenic |
CAGAAAGCTCGTGAAGGGTT+TGG | 0.425189 | 2.3:-12040421 | MS.gene35513:CDS |
TCCATGGCTTTGAGCCAAAC+GGG | 0.441683 | 2.3:+12040387 | None:intergenic |
TTCCATGGCTTTGAGCCAAA+CGG | 0.442508 | 2.3:+12040386 | None:intergenic |
TCAGGTCGAGGAAATGTTGC+TGG | 0.451486 | 2.3:+12039941 | None:intergenic |
CCTTGACAGGACAAGGAAAT+GGG | 0.457468 | 2.3:+12038761 | None:intergenic |
GGCGCGCAATTTGCTTCAGA+CGG | 0.457766 | 2.3:+12038809 | None:intergenic |
GCAAATAATCGAGACGGAGC+AGG | 0.479200 | 2.3:+12039042 | None:intergenic |
GAGGAATCCATGCAGAGATT+CGG | 0.486383 | 2.3:-12038658 | MS.gene35513:CDS |
GGAATATATAGCAGAGAAGA+AGG | 0.491970 | 2.3:-12038851 | MS.gene35513:CDS |
GACCATACTTGATGGGATCA+TGG | 0.497888 | 2.3:+12039840 | None:intergenic |
CTCTTGACATAAACATCCTC+AGG | 0.505090 | 2.3:+12039893 | None:intergenic |
TCAGCTTGAATCTCCTTGAC+AGG | 0.509220 | 2.3:+12038748 | None:intergenic |
TTCACAAGTTCACGTATGCT+GGG | 0.511010 | 2.3:+12038691 | None:intergenic |
ACCCGTTTGGCTCAAAGCCA+TGG | 0.520517 | 2.3:-12040388 | MS.gene35513:CDS |
AGCAAATTGCGCGCCTTCAA+GGG | 0.521753 | 2.3:-12038801 | MS.gene35513:CDS |
CCCATTTCCTTGTCCTGTCA+AGG | 0.523193 | 2.3:-12038761 | MS.gene35513:CDS |
CTGAGGATGTTTATGTCAAG+AGG | 0.530196 | 2.3:-12039892 | MS.gene35513:CDS |
GGACAAGGAAATGGGTTTGG+AGG | 0.541575 | 2.3:+12038769 | None:intergenic |
GCGCGCAATTTGCTTCAGAC+GGG | 0.549124 | 2.3:+12038810 | None:intergenic |
TGCAGTTTACCCTCAGGTCG+AGG | 0.553031 | 2.3:+12039929 | None:intergenic |
TCTGGAGATTAACTGTTCCA+TGG | 0.555092 | 2.3:+12040371 | None:intergenic |
ATGGTCTGCAGTTTACCCTC+AGG | 0.555199 | 2.3:+12039923 | None:intergenic |
TGAATCTCCTTGACAGGACA+AGG | 0.555695 | 2.3:+12038754 | None:intergenic |
ACTTGTGAAGCAAAAGAAAG+AGG | 0.556666 | 2.3:-12038677 | MS.gene35513:CDS |
GCTCGTGAAGGGTTTGGCCA+AGG | 0.562404 | 2.3:-12040415 | MS.gene35513:CDS |
GTTCTTGAGTTAAAAGAGCA+TGG | 0.567548 | 2.3:-12039012 | MS.gene35513:CDS |
GGAACAATGTCGTTTATGAA+AGG | 0.570040 | 2.3:-12040462 | None:intergenic |
CGATCCAGAAAGCTCGTGAA+GGG | 0.576415 | 2.3:-12040426 | MS.gene35513:CDS |
AGCAACATTTCCTCGACCTG+AGG | 0.596750 | 2.3:-12039939 | MS.gene35513:CDS |
TCGATCCAGAAAGCTCGTGA+AGG | 0.601748 | 2.3:-12040427 | MS.gene35513:CDS |
AACATCCTCAGGAAAAGTGA+TGG | 0.606185 | 2.3:+12039904 | None:intergenic |
AGGAGATTCAAGCTGAGGAG+AGG | 0.606513 | 2.3:-12038741 | MS.gene35513:CDS |
CATTAGTGAGGATGAAGCAA+TGG | 0.607618 | 2.3:-12038989 | MS.gene35513:CDS |
ATCTCGTCCGAATCTCTGCA+TGG | 0.619034 | 2.3:+12038651 | None:intergenic |
TGTCAAGGAGATTCAAGCTG+AGG | 0.645126 | 2.3:-12038746 | MS.gene35513:CDS |
CTTAAGGCAAATAATCGAGA+CGG | 0.649395 | 2.3:+12039036 | None:intergenic |
AAAAGAGCATGGCATTAGTG+AGG | 0.653951 | 2.3:-12039001 | MS.gene35513:CDS |
GCAACATTTCCTCGACCTGA+GGG | 0.663029 | 2.3:-12039938 | MS.gene35513:CDS |
GGTCGAGGAAATGTTGCTGG+TGG | 0.690452 | 2.3:+12039944 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACTTTTTAGTTTATTTATTT+AGG | - | chr2.3:12038983-12039002 | MS.gene35513:CDS | 10.0% |
!!! | TTATTTATTTTTTTATAAGC+TGG | - | chr2.3:12039833-12039852 | MS.gene35513:intron | 10.0% |
!! | TTATTTATTTAGGAATTCTT+TGG | - | chr2.3:12038993-12039012 | MS.gene35513:CDS | 15.0% |
!! | ATCAACTATAAAAATCTAGA+TGG | + | chr2.3:12038808-12038827 | None:intergenic | 20.0% |
!! | CAAAAAATGTAACTATTAGA+GGG | + | chr2.3:12040205-12040224 | None:intergenic | 20.0% |
!! | TCAACTATAAAAATCTAGAT+GGG | + | chr2.3:12038807-12038826 | None:intergenic | 20.0% |
! | AAGAATTAACAGATAGCAAA+AGG | + | chr2.3:12039692-12039711 | None:intergenic | 25.0% |
! | ACAAACATAAAAGTTCTTGA+AGG | + | chr2.3:12039502-12039521 | None:intergenic | 25.0% |
! | ACATATCCATGAATCAATTT+AGG | + | chr2.3:12040154-12040173 | None:intergenic | 25.0% |
! | AGGCAATAATTTAAAAGATC+TGG | + | chr2.3:12038748-12038767 | None:intergenic | 25.0% |
! | CAAAAGAAACAGAGAATAAA+AGG | + | chr2.3:12038768-12038787 | None:intergenic | 25.0% |
! | CATAAAGTAAGAACAAATTC+CGG | + | chr2.3:12040182-12040201 | None:intergenic | 25.0% |
! | CCTTCAAATAAAACGAAAAA+AGG | + | chr2.3:12039088-12039107 | None:intergenic | 25.0% |
! | GAACTATTATGTGATTTACT+TGG | - | chr2.3:12039769-12039788 | MS.gene35513:intron | 25.0% |
! | GCAAAAAATGTAACTATTAG+AGG | + | chr2.3:12040206-12040225 | None:intergenic | 25.0% |
! | TTCTTCAATGTTCAATATTG+TGG | - | chr2.3:12039548-12039567 | MS.gene35513:intron | 25.0% |
!! | AAGAACTGTTACTCTTTTTA+TGG | - | chr2.3:12039062-12039081 | MS.gene35513:intron | 25.0% |
!! | TCATAATGTTTAAGTTCAAC+AGG | - | chr2.3:12040018-12040037 | MS.gene35513:intron | 25.0% |
!!! | CCTTTTTTCGTTTTATTTGA+AGG | - | chr2.3:12039085-12039104 | MS.gene35513:intron | 25.0% |
!!! | CTAAATTTTGATCCATGAAT+GGG | - | chr2.3:12039466-12039485 | MS.gene35513:intron | 25.0% |
!!! | TAAATTTTGATCCATGAATG+GGG | - | chr2.3:12039467-12039486 | MS.gene35513:intron | 25.0% |
!!! | TCTAAATTTTGATCCATGAA+TGG | - | chr2.3:12039465-12039484 | MS.gene35513:intron | 25.0% |
!!! | TTATGAATTTGGCTTGTATA+TGG | - | chr2.3:12039360-12039379 | MS.gene35513:intron | 25.0% |
AGAAAAAAGACCATACTTGA+TGG | + | chr2.3:12039269-12039288 | None:intergenic | 30.0% | |
ATTCATGGATATGTTCATTC+CGG | - | chr2.3:12040160-12040179 | MS.gene35513:intron | 30.0% | |
GAAAAAAGACCATACTTGAT+GGG | + | chr2.3:12039268-12039287 | None:intergenic | 30.0% | |
GATGTTTCAAGCATAGAATA+TGG | + | chr2.3:12039310-12039329 | None:intergenic | 30.0% | |
GCCAAATTCATAAAAGACTA+CGG | + | chr2.3:12039353-12039372 | None:intergenic | 30.0% | |
GTAAATCACATAATAGTTCG+TGG | + | chr2.3:12039768-12039787 | None:intergenic | 30.0% | |
TTGTAACAACTATTCCATTG+AGG | + | chr2.3:12039881-12039900 | None:intergenic | 30.0% | |
! | ATTTTTCCTGTATCACACTT+TGG | - | chr2.3:12038913-12038932 | MS.gene35513:intron | 30.0% |
! | GTGTAACCTAAATTGATTCA+TGG | - | chr2.3:12040145-12040164 | MS.gene35513:intron | 30.0% |
!! | TGTTTTTATTGTGCTTACCA+GGG | - | chr2.3:12039129-12039148 | MS.gene35513:intron | 30.0% |
!! | TTGTTACAAATTGATGATGC+AGG | - | chr2.3:12039892-12039911 | MS.gene35513:CDS | 30.0% |
!! | TTTTAACTCAAGAACCCTTA+AGG | + | chr2.3:12040081-12040100 | None:intergenic | 30.0% |
!!! | GATCATGGTATTTTGATTCT+GGG | + | chr2.3:12039246-12039265 | None:intergenic | 30.0% |
!!! | TTGTTTTTATTGTGCTTACC+AGG | - | chr2.3:12039128-12039147 | MS.gene35513:intron | 30.0% |
AACCATCAACAGAACATACA+AGG | + | chr2.3:12039721-12039740 | None:intergenic | 35.0% | |
ACTACGGCAATACAAAAACT+GGG | + | chr2.3:12039337-12039356 | None:intergenic | 35.0% | |
ACTTGTGAAGCAAAAGAAAG+AGG | - | chr2.3:12040421-12040440 | MS.gene35513:CDS | 35.0% | |
AGTTCATGTCTACTTGTTTG+TGG | - | chr2.3:12039995-12040014 | MS.gene35513:intron | 35.0% | |
ATTCACTAGGAATTCCTCAA+TGG | - | chr2.3:12039864-12039883 | MS.gene35513:CDS | 35.0% | |
ATTGTGGACTTCTTTCTAGA+GGG | - | chr2.3:12039564-12039583 | MS.gene35513:intron | 35.0% | |
CATAATCCAAAGTGTGATAC+AGG | + | chr2.3:12038922-12038941 | None:intergenic | 35.0% | |
CTGTATCACACTTTGGATTA+TGG | - | chr2.3:12038920-12038939 | MS.gene35513:intron | 35.0% | |
CTTAAGGCAAATAATCGAGA+CGG | + | chr2.3:12040065-12040084 | None:intergenic | 35.0% | |
GGAATATATAGCAGAGAAGA+AGG | - | chr2.3:12040247-12040266 | MS.gene35513:intron | 35.0% | |
GTCTCGATTATTTGCCTTAA+GGG | - | chr2.3:12040064-12040083 | MS.gene35513:intron | 35.0% | |
GTTCTTGAGTTAAAAGAGCA+TGG | - | chr2.3:12040086-12040105 | MS.gene35513:intron | 35.0% | |
TACCTTGTATGTTCTGTTGA+TGG | - | chr2.3:12039716-12039735 | MS.gene35513:intron | 35.0% | |
TATTGTGGACTTCTTTCTAG+AGG | - | chr2.3:12039563-12039582 | MS.gene35513:intron | 35.0% | |
! | GCCGTAGTCTTTTATGAATT+TGG | - | chr2.3:12039349-12039368 | MS.gene35513:intron | 35.0% |
!!! | ATGTTCTGTTGATGGTTTTG+TGG | - | chr2.3:12039724-12039743 | MS.gene35513:intron | 35.0% |
!!! | GCTGGTTTTATCAATTCACT+AGG | - | chr2.3:12039851-12039870 | MS.gene35513:CDS | 35.0% |
!!! | GGATCATGGTATTTTGATTC+TGG | + | chr2.3:12039247-12039266 | None:intergenic | 35.0% |
AACATCCTCAGGAAAAGTGA+TGG | + | chr2.3:12039197-12039216 | None:intergenic | 40.0% | |
AATCTGAGAAAACGTGAAGC+AGG | + | chr2.3:12039638-12039657 | None:intergenic | 40.0% | |
AGAGATTCGGACGAGATAAT+TGG | - | chr2.3:12040453-12040472 | MS.gene35513:CDS | 40.0% | |
AGTATAGCATAGTCCAAGAC+TGG | + | chr2.3:12038966-12038985 | None:intergenic | 40.0% | |
CATTAGTGAGGATGAAGCAA+TGG | - | chr2.3:12040109-12040128 | MS.gene35513:intron | 40.0% | |
CGTCTCGATTATTTGCCTTA+AGG | - | chr2.3:12040063-12040082 | MS.gene35513:intron | 40.0% | |
CTCTTGACATAAACATCCTC+AGG | + | chr2.3:12039208-12039227 | None:intergenic | 40.0% | |
CTGAGGATGTTTATGTCAAG+AGG | - | chr2.3:12039206-12039225 | MS.gene35513:intron | 40.0% | |
GACTACGGCAATACAAAAAC+TGG | + | chr2.3:12039338-12039357 | None:intergenic | 40.0% | |
GTATAGCATAGTCCAAGACT+GGG | + | chr2.3:12038965-12038984 | None:intergenic | 40.0% | |
TACACAAGATGCATAGTGTG+TGG | - | chr2.3:12039917-12039936 | MS.gene35513:CDS | 40.0% | |
TACCATGATCCCATCAAGTA+TGG | - | chr2.3:12039256-12039275 | MS.gene35513:intron | 40.0% | |
TCTGGAGATTAACTGTTCCA+TGG | + | chr2.3:12038730-12038749 | None:intergenic | 40.0% | |
TTCACAAGTTCACGTATGCT+GGG | + | chr2.3:12040410-12040429 | None:intergenic | 40.0% | |
! | AAAAGAGCATGGCATTAGTG+AGG | - | chr2.3:12040097-12040116 | MS.gene35513:intron | 40.0% |
! | TGACTCTTTTTGCTGCACAA+TGG | - | chr2.3:12038827-12038846 | MS.gene35513:CDS | 40.0% |
!! | GTGTGTGTGTGCTTTTTAGA+TGG | - | chr2.3:12040226-12040245 | MS.gene35513:intron | 40.0% |
!!! | GACGTTATTTTTCCCAGTCT+TGG | - | chr2.3:12038950-12038969 | MS.gene35513:intron | 40.0% |
AATAGTCCTCCTGATGCAGA+TGG | + | chr2.3:12039964-12039983 | None:intergenic | 45.0% | |
CCTTGACAGGACAAGGAAAT+GGG | + | chr2.3:12040340-12040359 | None:intergenic | 45.0% | |
CTAGATGGGAGATTCTCAAG+TGG | + | chr2.3:12038793-12038812 | None:intergenic | 45.0% | |
CTTCACAAGTTCACGTATGC+TGG | + | chr2.3:12040411-12040430 | None:intergenic | 45.0% | |
GACCATACTTGATGGGATCA+TGG | + | chr2.3:12039261-12039280 | None:intergenic | 45.0% | |
GAGGAATCCATGCAGAGATT+CGG | - | chr2.3:12040440-12040459 | MS.gene35513:CDS | 45.0% | |
GGTCAACATTTCCCCATTCA+TGG | + | chr2.3:12039481-12039500 | None:intergenic | 45.0% | |
TAGATGCTTCCATCTGCATC+AGG | - | chr2.3:12039952-12039971 | MS.gene35513:intron | 45.0% | |
TCAGCTTGAATCTCCTTGAC+AGG | + | chr2.3:12040353-12040372 | None:intergenic | 45.0% | |
TCCTTGACAGGACAAGGAAA+TGG | + | chr2.3:12040341-12040360 | None:intergenic | 45.0% | |
TCGTGGAAAAAGAACAGCTG+AGG | + | chr2.3:12039751-12039770 | None:intergenic | 45.0% | |
TGAATCTCCTTGACAGGACA+AGG | + | chr2.3:12040347-12040366 | None:intergenic | 45.0% | |
TGTCAAGGAGATTCAAGCTG+AGG | - | chr2.3:12040352-12040371 | MS.gene35513:intron | 45.0% | |
! | ACAGGACAAGGAAATGGGTT+TGG | + | chr2.3:12040335-12040354 | None:intergenic | 45.0% |
!! | TTCCATGGCTTTGAGCCAAA+CGG | + | chr2.3:12038715-12038734 | None:intergenic | 45.0% |
AAGCAAATTGCGCGCCTTCA+AGG | - | chr2.3:12040296-12040315 | MS.gene35513:intron | 50.0% | |
AGCAAATTGCGCGCCTTCAA+GGG | - | chr2.3:12040297-12040316 | MS.gene35513:intron | 50.0% | |
AGCAACATTTCCTCGACCTG+AGG | - | chr2.3:12039159-12039178 | MS.gene35513:intron | 50.0% | |
AGGAGATTCAAGCTGAGGAG+AGG | - | chr2.3:12040357-12040376 | MS.gene35513:intron | 50.0% | |
ATCTCGTCCGAATCTCTGCA+TGG | + | chr2.3:12040450-12040469 | None:intergenic | 50.0% | |
ATGCTTCCATCTGCATCAGG+AGG | - | chr2.3:12039955-12039974 | MS.gene35513:intron | 50.0% | |
ATGGTCTGCAGTTTACCCTC+AGG | + | chr2.3:12039178-12039197 | None:intergenic | 50.0% | |
CAAACCCTTCACGAGCTTTC+TGG | + | chr2.3:12038679-12038698 | None:intergenic | 50.0% | |
CAGAAAGCTCGTGAAGGGTT+TGG | - | chr2.3:12038677-12038696 | MS.gene35513:CDS | 50.0% | |
CCCATTTCCTTGTCCTGTCA+AGG | - | chr2.3:12040337-12040356 | MS.gene35513:intron | 50.0% | |
CGATCCAGAAAGCTCGTGAA+GGG | - | chr2.3:12038672-12038691 | MS.gene35513:CDS | 50.0% | |
GAGGCAGTTTCTTCCCTTGA+AGG | + | chr2.3:12040313-12040332 | None:intergenic | 50.0% | |
GCAAATAATCGAGACGGAGC+AGG | + | chr2.3:12040059-12040078 | None:intergenic | 50.0% | |
GCAACATTTCCTCGACCTGA+GGG | - | chr2.3:12039160-12039179 | MS.gene35513:intron | 50.0% | |
TCAGGTCGAGGAAATGTTGC+TGG | + | chr2.3:12039160-12039179 | None:intergenic | 50.0% | |
TCGATCCAGAAAGCTCGTGA+AGG | - | chr2.3:12038671-12038690 | MS.gene35513:CDS | 50.0% | |
! | GGACAAGGAAATGGGTTTGG+AGG | + | chr2.3:12040332-12040351 | None:intergenic | 50.0% |
!! | GCAGACCATCACTTTTCCTG+AGG | - | chr2.3:12039189-12039208 | MS.gene35513:intron | 50.0% |
!! | TCCATGGCTTTGAGCCAAAC+GGG | + | chr2.3:12038714-12038733 | None:intergenic | 50.0% |
GGTCGAGGAAATGTTGCTGG+TGG | + | chr2.3:12039157-12039176 | None:intergenic | 55.0% | |
TGCAGTTTACCCTCAGGTCG+AGG | + | chr2.3:12039172-12039191 | None:intergenic | 55.0% | |
! | AAATGTTGCTGGTGGTGCCC+TGG | + | chr2.3:12039149-12039168 | None:intergenic | 55.0% |
! | ACCCGTTTGGCTCAAAGCCA+TGG | - | chr2.3:12038710-12038729 | MS.gene35513:CDS | 55.0% |
! | GCGCGCAATTTGCTTCAGAC+GGG | + | chr2.3:12040291-12040310 | None:intergenic | 55.0% |
! | GGCGCGCAATTTGCTTCAGA+CGG | + | chr2.3:12040292-12040311 | None:intergenic | 55.0% |
!! | GGCTTTGAGCCAAACGGGTT+CGG | + | chr2.3:12038709-12038728 | None:intergenic | 55.0% |
GCTCGTGAAGGGTTTGGCCA+AGG | - | chr2.3:12038683-12038702 | MS.gene35513:CDS | 60.0% | |
TGGCCAAGGCCGAACCCGTT+TGG | - | chr2.3:12038697-12038716 | MS.gene35513:CDS | 65.0% | |
! | GAGCCAAACGGGTTCGGCCT+TGG | + | chr2.3:12038703-12038722 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 12038642 | 12040478 | 12038642 | ID=MS.gene35513 |
chr2.3 | mRNA | 12038642 | 12040478 | 12038642 | ID=MS.gene35513.t1;Parent=MS.gene35513 |
chr2.3 | exon | 12040384 | 12040478 | 12040384 | ID=MS.gene35513.t1.exon1;Parent=MS.gene35513.t1 |
chr2.3 | CDS | 12040384 | 12040478 | 12040384 | ID=cds.MS.gene35513.t1;Parent=MS.gene35513.t1 |
chr2.3 | exon | 12039848 | 12039970 | 12039848 | ID=MS.gene35513.t1.exon2;Parent=MS.gene35513.t1 |
chr2.3 | CDS | 12039848 | 12039970 | 12039848 | ID=cds.MS.gene35513.t1;Parent=MS.gene35513.t1 |
chr2.3 | exon | 12038978 | 12039080 | 12038978 | ID=MS.gene35513.t1.exon3;Parent=MS.gene35513.t1 |
chr2.3 | CDS | 12038978 | 12039080 | 12038978 | ID=cds.MS.gene35513.t1;Parent=MS.gene35513.t1 |
chr2.3 | exon | 12038642 | 12038875 | 12038642 | ID=MS.gene35513.t1.exon4;Parent=MS.gene35513.t1 |
chr2.3 | CDS | 12038642 | 12038875 | 12038642 | ID=cds.MS.gene35513.t1;Parent=MS.gene35513.t1 |
Gene Sequence |
Protein sequence |