Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36035.t1 | XP_013445500.1 | 96.2 | 132 | 4 | 1 | 1 | 132 | 1 | 131 | 1.10E-65 | 260.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36035.t1 | Q9T076 | 54.2 | 131 | 56 | 1 | 1 | 127 | 4 | 134 | 1.9e-34 | 147.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36035.t1 | A0A072TQN9 | 96.2 | 132 | 4 | 1 | 1 | 132 | 1 | 131 | 7.7e-66 | 260.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057668 | MS.gene36035 | 0.801212 | 1.00E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36035.t1 | MTR_8g463180 | 88.925 | 307 | 30 | 3 | 1 | 307 | 1 | 303 | 7.03e-149 | 420 |
MS.gene36035.t1 | MTR_2g079030 | 55.789 | 190 | 71 | 6 | 1 | 187 | 3 | 182 | 6.22e-60 | 200 |
MS.gene36035.t1 | MTR_2g090575 | 41.379 | 290 | 146 | 7 | 7 | 275 | 8 | 294 | 3.61e-54 | 180 |
MS.gene36035.t1 | MTR_2g090580 | 46.927 | 179 | 86 | 3 | 1 | 173 | 4 | 179 | 1.07e-47 | 159 |
MS.gene36035.t1 | MTR_8g095013 | 38.489 | 278 | 147 | 6 | 1 | 260 | 2 | 273 | 2.65e-45 | 155 |
MS.gene36035.t1 | MTR_8g094990 | 39.130 | 253 | 130 | 5 | 1 | 232 | 2 | 251 | 5.49e-43 | 149 |
MS.gene36035.t1 | MTR_4g124280 | 41.553 | 219 | 104 | 5 | 21 | 237 | 22 | 218 | 9.21e-43 | 147 |
MS.gene36035.t1 | MTR_4g078410 | 51.887 | 106 | 51 | 0 | 20 | 125 | 21 | 126 | 3.74e-39 | 136 |
MS.gene36035.t1 | MTR_8g086360 | 47.761 | 134 | 66 | 2 | 7 | 136 | 5 | 138 | 6.86e-39 | 135 |
MS.gene36035.t1 | MTR_8g095020 | 40.183 | 219 | 102 | 7 | 22 | 231 | 23 | 221 | 7.35e-39 | 139 |
MS.gene36035.t1 | MTR_3g092170 | 39.720 | 214 | 121 | 3 | 1 | 206 | 2 | 215 | 2.38e-37 | 134 |
MS.gene36035.t1 | MTR_4g081100 | 46.281 | 121 | 63 | 2 | 7 | 125 | 15 | 135 | 8.97e-36 | 129 |
MS.gene36035.t1 | MTR_3g105930 | 45.833 | 144 | 66 | 4 | 21 | 161 | 24 | 158 | 1.99e-35 | 126 |
MS.gene36035.t1 | MTR_1g014120 | 45.455 | 121 | 63 | 2 | 8 | 125 | 9 | 129 | 1.18e-34 | 124 |
MS.gene36035.t1 | MTR_2g101300 | 48.000 | 125 | 57 | 3 | 12 | 133 | 18 | 137 | 1.34e-31 | 117 |
MS.gene36035.t1 | MTR_2g083250 | 43.478 | 115 | 61 | 3 | 21 | 131 | 23 | 137 | 2.61e-30 | 115 |
MS.gene36035.t1 | MTR_6g022170 | 49.541 | 109 | 50 | 2 | 26 | 131 | 36 | 142 | 2.66e-29 | 110 |
MS.gene36035.t1 | MTR_4g077787 | 38.356 | 146 | 75 | 5 | 5 | 142 | 12 | 150 | 2.32e-27 | 105 |
MS.gene36035.t1 | MTR_4g111640 | 36.970 | 165 | 86 | 5 | 9 | 163 | 12 | 168 | 1.46e-26 | 103 |
MS.gene36035.t1 | MTR_7g090170 | 38.889 | 144 | 59 | 5 | 21 | 161 | 24 | 141 | 7.09e-24 | 95.5 |
MS.gene36035.t1 | MTR_4g112310 | 42.991 | 107 | 59 | 1 | 40 | 146 | 2 | 106 | 1.25e-22 | 91.7 |
MS.gene36035.t1 | MTR_5g006040 | 31.410 | 156 | 105 | 1 | 7 | 162 | 9 | 162 | 2.07e-22 | 92.4 |
MS.gene36035.t1 | MTR_4g130780 | 34.167 | 120 | 74 | 4 | 7 | 121 | 10 | 129 | 9.75e-20 | 85.1 |
MS.gene36035.t1 | MTR_2g088990 | 32.031 | 128 | 83 | 3 | 4 | 130 | 5 | 129 | 4.74e-18 | 81.6 |
MS.gene36035.t1 | MTR_2g025580 | 34.959 | 123 | 71 | 4 | 11 | 132 | 15 | 129 | 1.31e-17 | 79.3 |
MS.gene36035.t1 | MTR_1g090420 | 30.556 | 180 | 114 | 5 | 11 | 182 | 15 | 191 | 7.68e-17 | 78.2 |
MS.gene36035.t1 | MTR_4g114870 | 37.000 | 100 | 61 | 1 | 24 | 121 | 191 | 290 | 9.09e-17 | 80.1 |
MS.gene36035.t1 | MTR_4g114870 | 31.111 | 135 | 84 | 2 | 10 | 135 | 8 | 142 | 3.02e-16 | 78.6 |
MS.gene36035.t1 | MTR_0334s0010 | 35.043 | 117 | 73 | 3 | 7 | 121 | 10 | 125 | 2.03e-16 | 76.6 |
MS.gene36035.t1 | MTR_1g077790 | 31.731 | 104 | 68 | 1 | 21 | 121 | 26 | 129 | 1.14e-15 | 74.3 |
MS.gene36035.t1 | MTR_5g088000 | 33.824 | 136 | 83 | 5 | 5 | 137 | 1 | 132 | 1.54e-15 | 72.8 |
MS.gene36035.t1 | MTR_1g104800 | 31.250 | 112 | 77 | 0 | 11 | 122 | 12 | 123 | 1.93e-15 | 73.6 |
MS.gene36035.t1 | MTR_8g099220 | 32.258 | 124 | 78 | 2 | 4 | 121 | 4 | 127 | 2.43e-15 | 71.6 |
MS.gene36035.t1 | MTR_3g099570 | 34.752 | 141 | 85 | 4 | 1 | 138 | 1 | 137 | 4.38e-15 | 72.4 |
MS.gene36035.t1 | MTR_4g114830 | 36.290 | 124 | 73 | 4 | 16 | 134 | 20 | 142 | 1.05e-14 | 70.9 |
MS.gene36035.t1 | MTR_4g067200 | 31.387 | 137 | 81 | 5 | 7 | 137 | 10 | 139 | 1.49e-14 | 70.9 |
MS.gene36035.t1 | MTR_4g066110 | 31.387 | 137 | 81 | 5 | 7 | 137 | 10 | 139 | 1.49e-14 | 70.9 |
MS.gene36035.t1 | MTR_6g083240 | 33.333 | 174 | 92 | 6 | 7 | 174 | 8 | 163 | 2.06e-14 | 70.5 |
MS.gene36035.t1 | MTR_1g090190 | 33.793 | 145 | 86 | 4 | 18 | 155 | 17 | 158 | 2.10e-14 | 70.5 |
MS.gene36035.t1 | MTR_6g013420 | 36.232 | 138 | 79 | 5 | 1 | 135 | 17 | 148 | 3.86e-14 | 69.7 |
MS.gene36035.t1 | MTR_8g007020 | 37.190 | 121 | 68 | 5 | 5 | 122 | 6 | 121 | 6.49e-14 | 69.3 |
MS.gene36035.t1 | MTR_1g112700 | 27.632 | 152 | 101 | 4 | 3 | 150 | 12 | 158 | 1.10e-13 | 68.6 |
MS.gene36035.t1 | MTR_3g099580 | 37.097 | 124 | 71 | 4 | 1 | 121 | 1 | 120 | 6.07e-13 | 66.6 |
MS.gene36035.t1 | MTR_8g007035 | 35.833 | 120 | 71 | 4 | 5 | 122 | 6 | 121 | 7.32e-13 | 66.6 |
MS.gene36035.t1 | MTR_6g013200 | 36.667 | 120 | 70 | 4 | 5 | 121 | 15 | 131 | 9.71e-13 | 65.9 |
MS.gene36035.t1 | MTR_7g086100 | 31.667 | 120 | 76 | 3 | 5 | 122 | 7 | 122 | 8.96e-12 | 64.3 |
MS.gene36035.t1 | MTR_6g080660 | 31.933 | 119 | 74 | 3 | 3 | 121 | 11 | 122 | 1.28e-11 | 63.2 |
MS.gene36035.t1 | MTR_3g099680 | 35.000 | 100 | 62 | 2 | 23 | 121 | 25 | 122 | 3.20e-11 | 62.4 |
MS.gene36035.t1 | MTR_3g099540 | 32.479 | 117 | 75 | 3 | 5 | 121 | 9 | 121 | 3.62e-11 | 60.5 |
MS.gene36035.t1 | MTR_6g023760 | 34.021 | 97 | 60 | 3 | 26 | 121 | 28 | 121 | 6.42e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36035.t1 | AT4G27520 | 54.198 | 131 | 56 | 1 | 1 | 127 | 4 | 134 | 9.79e-50 | 169 |
MS.gene36035.t1 | AT5G53870 | 47.917 | 192 | 82 | 5 | 8 | 197 | 12 | 187 | 5.00e-49 | 167 |
MS.gene36035.t1 | AT5G53870 | 47.917 | 192 | 82 | 5 | 8 | 197 | 12 | 187 | 5.20e-49 | 167 |
MS.gene36035.t1 | AT4G28365 | 48.366 | 153 | 72 | 3 | 1 | 146 | 5 | 157 | 2.05e-47 | 158 |
MS.gene36035.t1 | AT4G32490 | 50.926 | 108 | 53 | 0 | 16 | 123 | 23 | 130 | 3.93e-41 | 142 |
MS.gene36035.t1 | AT2G25060 | 43.678 | 174 | 76 | 5 | 4 | 174 | 13 | 167 | 1.41e-38 | 135 |
MS.gene36035.t1 | AT4G31840 | 46.259 | 147 | 75 | 3 | 5 | 148 | 8 | 153 | 1.45e-36 | 129 |
MS.gene36035.t1 | AT5G57920 | 39.568 | 139 | 79 | 3 | 8 | 141 | 6 | 144 | 2.34e-32 | 118 |
MS.gene36035.t1 | AT5G57920 | 44.954 | 109 | 57 | 2 | 19 | 124 | 18 | 126 | 2.36e-32 | 118 |
MS.gene36035.t1 | AT5G57920 | 42.188 | 128 | 69 | 3 | 19 | 141 | 50 | 177 | 7.81e-32 | 118 |
MS.gene36035.t1 | AT4G30590 | 38.922 | 167 | 79 | 4 | 1 | 160 | 1 | 151 | 8.63e-32 | 117 |
MS.gene36035.t1 | AT5G25090 | 43.802 | 121 | 65 | 2 | 8 | 125 | 10 | 130 | 1.52e-31 | 116 |
MS.gene36035.t1 | AT3G20570 | 37.143 | 175 | 98 | 3 | 9 | 182 | 15 | 178 | 1.61e-30 | 114 |
MS.gene36035.t1 | AT1G48940 | 45.902 | 122 | 56 | 3 | 5 | 122 | 11 | 126 | 2.48e-27 | 105 |
MS.gene36035.t1 | AT2G23990 | 39.744 | 156 | 79 | 5 | 5 | 156 | 8 | 152 | 9.88e-27 | 104 |
MS.gene36035.t1 | AT1G79800 | 39.073 | 151 | 74 | 5 | 4 | 146 | 11 | 151 | 5.24e-26 | 102 |
MS.gene36035.t1 | AT5G14345 | 44.545 | 110 | 55 | 3 | 28 | 134 | 20 | 126 | 2.34e-25 | 99.4 |
MS.gene36035.t1 | AT3G18590 | 45.082 | 122 | 60 | 3 | 5 | 122 | 9 | 127 | 3.41e-25 | 100 |
MS.gene36035.t1 | AT2G23990 | 36.000 | 175 | 78 | 6 | 5 | 156 | 8 | 171 | 3.30e-22 | 93.2 |
MS.gene36035.t1 | AT2G31050 | 39.450 | 109 | 65 | 1 | 26 | 134 | 31 | 138 | 4.28e-20 | 86.7 |
MS.gene36035.t1 | AT5G26330 | 34.513 | 113 | 74 | 0 | 12 | 124 | 12 | 124 | 3.44e-18 | 81.3 |
MS.gene36035.t1 | AT2G26720 | 37.113 | 97 | 60 | 1 | 26 | 122 | 31 | 126 | 6.27e-17 | 78.2 |
MS.gene36035.t1 | AT5G07475 | 31.507 | 146 | 93 | 4 | 1 | 143 | 7 | 148 | 8.53e-17 | 77.4 |
MS.gene36035.t1 | AT2G32300 | 30.128 | 156 | 92 | 3 | 10 | 165 | 12 | 150 | 3.19e-16 | 77.4 |
MS.gene36035.t1 | AT2G32300 | 30.128 | 156 | 92 | 3 | 10 | 165 | 42 | 180 | 4.09e-15 | 74.7 |
MS.gene36035.t1 | AT3G17675 | 30.252 | 119 | 79 | 2 | 5 | 121 | 11 | 127 | 6.95e-15 | 70.5 |
MS.gene36035.t1 | AT3G60270 | 36.893 | 103 | 60 | 3 | 21 | 122 | 23 | 121 | 3.33e-14 | 70.1 |
MS.gene36035.t1 | AT5G15350 | 35.000 | 120 | 73 | 3 | 23 | 140 | 28 | 144 | 9.42e-14 | 68.6 |
MS.gene36035.t1 | AT1G64640 | 31.933 | 119 | 79 | 2 | 24 | 141 | 33 | 150 | 3.56e-13 | 67.4 |
MS.gene36035.t1 | AT4G12880 | 34.653 | 101 | 61 | 3 | 23 | 121 | 28 | 125 | 4.24e-12 | 63.2 |
MS.gene36035.t1 | AT2G27035 | 30.070 | 143 | 84 | 5 | 10 | 151 | 15 | 142 | 7.35e-12 | 63.2 |
MS.gene36035.t1 | AT5G20230 | 32.353 | 102 | 66 | 2 | 23 | 122 | 24 | 124 | 1.00e-11 | 63.5 |
MS.gene36035.t1 | AT1G72230 | 33.613 | 119 | 68 | 3 | 3 | 121 | 10 | 117 | 1.15e-11 | 62.8 |
MS.gene36035.t1 | AT3G27200 | 29.600 | 125 | 82 | 4 | 1 | 122 | 1 | 122 | 2.36e-11 | 62.0 |
Find 129 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAGCTCCTTCGAGCTTTC+TGG | 0.120831 | 8.1:+52318602 | MS.gene36035:CDS |
CTTGGTGAAGGAGATGATTT+TGG | 0.279381 | 8.1:-52318129 | None:intergenic |
CCATCTTCGAATTTCTTGAT+TGG | 0.318575 | 8.1:-52317991 | None:intergenic |
CCCTGGAGTCGCTGCTCCCC+CGG | 0.321676 | 8.1:-52318475 | None:intergenic |
GGTCCTCCGGCTCCAGGACC+CGG | 0.322983 | 8.1:+52318456 | MS.gene36035:CDS |
TACCTATAGTGTCACTGATT+TGG | 0.323312 | 8.1:-52317390 | None:intergenic |
GCCGGAACAGGGGAGCTTGC+TGG | 0.329366 | 8.1:-52318240 | None:intergenic |
CATCTTCGAATTTCTTGATT+GGG | 0.341423 | 8.1:-52317990 | None:intergenic |
CCCTGCTGGAGCAGCTCCCC+CGG | 0.342727 | 8.1:-52318532 | None:intergenic |
GGACCACCTGCTGGGGTAGA+TGG | 0.356874 | 8.1:-52318438 | None:intergenic |
GGAGCCGGAGGACCACCTGC+TGG | 0.368310 | 8.1:-52318447 | None:intergenic |
TCCAGCAAGCTCCCCTGTTC+CGG | 0.374050 | 8.1:+52318239 | MS.gene36035:CDS |
ACTCCAGGGGCACCAGGACC+CGG | 0.378684 | 8.1:+52318489 | MS.gene36035:CDS |
GTAGGTCCACCAGCCGGAAC+AGG | 0.383142 | 8.1:-52318252 | None:intergenic |
TCCTGGTGTCCCTGATCCCC+CGG | 0.386729 | 8.1:-52318508 | None:intergenic |
ATCAGGGACACCAGGACCCG+GGG | 0.407662 | 8.1:+52318515 | MS.gene36035:CDS |
AGCTCCCCTGTTCCGGCTGG+TGG | 0.411187 | 8.1:+52318246 | MS.gene36035:CDS |
ACCTGTTCCTTCCAGCCCAC+TGG | 0.419128 | 8.1:-52317366 | None:intergenic |
TCCACCAACGAAATACTTGA+AGG | 0.422626 | 8.1:-52317305 | None:intergenic |
GTCCTCCGGCTCCAGGACCC+GGG | 0.434272 | 8.1:+52318457 | MS.gene36035:CDS |
ATCTAATTCAACTGCACCAC+CGG | 0.438406 | 8.1:+52318563 | MS.gene36035:CDS |
AAAAGATCAAAACTGTGAAA+AGG | 0.439027 | 8.1:+52318065 | MS.gene36035:CDS |
CTCCAGGGGCACCAGGACCC+GGG | 0.448613 | 8.1:+52318490 | MS.gene36035:CDS |
AGCACCAACGGCAAGGGTTG+CGG | 0.449999 | 8.1:-52318631 | None:intergenic |
GGATCAGGGACACCAGGACC+CGG | 0.450156 | 8.1:+52318513 | MS.gene36035:CDS |
ACCTCCAGCCGGTGGACCTA+TGG | 0.450407 | 8.1:+52318362 | MS.gene36035:CDS |
GCCTTCAAGTATTTCGTTGG+TGG | 0.451428 | 8.1:+52317304 | MS.gene36035:CDS |
CCACCTGCTGGTGAAGGAGC+TGG | 0.452499 | 8.1:-52318414 | None:intergenic |
AAAGATCAAAACTGTGAAAA+GGG | 0.454501 | 8.1:+52318066 | MS.gene36035:CDS |
TTAGATCCTGGTGACCCTGC+TGG | 0.455405 | 8.1:-52318546 | None:intergenic |
GCTGCTCCAGCAGGGTCACC+AGG | 0.456427 | 8.1:+52318540 | MS.gene36035:CDS |
GAGAATTACAACCAGTGGGC+TGG | 0.458809 | 8.1:+52317355 | MS.gene36035:CDS |
GAGCCGGAGGACCACCTGCT+GGG | 0.459286 | 8.1:-52318446 | None:intergenic |
GCTGGAGGTGTGCTCACTAC+TGG | 0.459593 | 8.1:-52318348 | None:intergenic |
ACCTCCGGCTGGTGGACCTA+TGG | 0.461437 | 8.1:+52318305 | MS.gene36035:CDS |
TCTCCTTCACCAAGTGGTGG+TGG | 0.464912 | 8.1:+52318138 | MS.gene36035:CDS |
GCCGGAGGTGTGCTCACTAC+TGG | 0.466620 | 8.1:-52318291 | None:intergenic |
GCAGGTGGTCCTCCGGCTCC+AGG | 0.469719 | 8.1:+52318450 | MS.gene36035:CDS |
GCAAGCTCCCCTGTTCCGGC+TGG | 0.470059 | 8.1:+52318243 | MS.gene36035:CDS |
ACCAGTGGGCTGGAAGGAAC+AGG | 0.473167 | 8.1:+52317365 | MS.gene36035:CDS |
TTTCAAGTACAAGAAGGGTT+CGG | 0.479224 | 8.1:+52317915 | MS.gene36035:CDS |
GATCAGGGACACCAGGACCC+GGG | 0.484770 | 8.1:+52318514 | MS.gene36035:CDS |
CAAGTATTTCGTTGGTGGAA+AGG | 0.487435 | 8.1:+52317309 | MS.gene36035:CDS |
GGGGTAGATGGACCACCTGC+TGG | 0.492892 | 8.1:-52318426 | None:intergenic |
TTTCCACTGATGAAATAGAA+TGG | 0.497104 | 8.1:-52318045 | None:intergenic |
GCAGCGACTCCAGGGGCACC+AGG | 0.499399 | 8.1:+52318483 | MS.gene36035:CDS |
TATGGCTTCATCTCCTTCTC+CGG | 0.503605 | 8.1:+52318380 | MS.gene36035:CDS |
GGAGCTGGTGGTCCACCTGC+CGG | 0.504880 | 8.1:-52318399 | None:intergenic |
TATTTCGTTGGTGGAAAGGA+TGG | 0.506955 | 8.1:+52317313 | MS.gene36035:CDS |
GGTGGTCCACCTGCCGGAGA+AGG | 0.507316 | 8.1:-52318393 | None:intergenic |
GAGTTCACTTTGGACAGAGC+AGG | 0.508058 | 8.1:+52318021 | MS.gene36035:CDS |
TCCTCCGGCTCCAGGACCCG+GGG | 0.508521 | 8.1:+52318458 | MS.gene36035:CDS |
GCTTCATCTCCTTCTCCGGC+AGG | 0.510071 | 8.1:+52318384 | MS.gene36035:CDS |
TACCCCAGCAGGTGGTCCTC+CGG | 0.511478 | 8.1:+52318443 | MS.gene36035:CDS |
CAAGCCTTCAAGTATTTCGT+TGG | 0.517033 | 8.1:+52317301 | MS.gene36035:CDS |
TCCAGGGGCACCAGGACCCG+GGG | 0.517503 | 8.1:+52318491 | MS.gene36035:CDS |
TATTCCGCAACCCTTGCCGT+TGG | 0.520673 | 8.1:+52318627 | MS.gene36035:CDS |
GAAGGGTTCGGACTCGGTGT+TGG | 0.525077 | 8.1:+52317927 | MS.gene36035:CDS |
CCACCAGCTCCTTCACCAGC+AGG | 0.525764 | 8.1:+52318411 | MS.gene36035:CDS |
TTCCAAATCAGTGACACTAT+AGG | 0.526349 | 8.1:+52317388 | MS.gene36035:CDS |
CACTGGTTGTAATTCTCAGA+AGG | 0.527393 | 8.1:-52317349 | None:intergenic |
GGTGGTCCATCTACCCCAGC+AGG | 0.528795 | 8.1:+52318432 | MS.gene36035:CDS |
CCAATCAAGAAATTCGAAGA+TGG | 0.535933 | 8.1:+52317991 | MS.gene36035:CDS |
GTACAAGAAGGGTTCGGACT+CGG | 0.539622 | 8.1:+52317921 | MS.gene36035:CDS |
GTGAAGAGAACAAAGAAGAG+AGG | 0.543513 | 8.1:-52317259 | None:intergenic |
CTTGCTGGAGGAATAGCCGC+TGG | 0.545733 | 8.1:-52318225 | None:intergenic |
TCAGGGACACCAGGACCCGG+GGG | 0.547872 | 8.1:+52318516 | MS.gene36035:CDS |
CTCACTACTGGAGATGGAGA+TGG | 0.551978 | 8.1:-52318336 | None:intergenic |
GTGAGCACACCTCCGGCTGG+TGG | 0.552623 | 8.1:+52318297 | MS.gene36035:CDS |
TCCAGTAGTGAGCACACCTC+CGG | 0.562951 | 8.1:+52318290 | MS.gene36035:CDS |
GGTGTGCTCACTACTGGAGA+TGG | 0.563208 | 8.1:-52318285 | None:intergenic |
GAAGCCATAGGTCCACCGGC+TGG | 0.563900 | 8.1:-52318366 | None:intergenic |
TGTTCCGGCTGGTGGACCTA+CGG | 0.567370 | 8.1:+52318254 | MS.gene36035:CDS |
TCATCTCCTTCTCCGGCAGG+TGG | 0.568679 | 8.1:+52318387 | MS.gene36035:CDS |
TAGGTCCACCAGCCGGAACA+GGG | 0.568683 | 8.1:-52318251 | None:intergenic |
GGTCCATCTACCCCAGCAGG+TGG | 0.568822 | 8.1:+52318435 | MS.gene36035:CDS |
CCTGCTGGTGAAGGAGCTGG+TGG | 0.574961 | 8.1:-52318411 | None:intergenic |
GGGCCATTCTATTTCATCAG+TGG | 0.577208 | 8.1:+52318042 | MS.gene36035:CDS |
GATGGACCACCTGCTGGTGA+AGG | 0.578374 | 8.1:-52318420 | None:intergenic |
AGCCGGAGGACCACCTGCTG+GGG | 0.579158 | 8.1:-52318445 | None:intergenic |
AAACAGAGCACCAACGGCAA+GGG | 0.581779 | 8.1:-52318637 | None:intergenic |
AGTTCACTTTGGACAGAGCA+GGG | 0.582623 | 8.1:+52318022 | MS.gene36035:CDS |
AGATGAAGCCATAGGTCCAC+CGG | 0.584657 | 8.1:-52318370 | None:intergenic |
GGTGTGCTCACTACTGGAGA+TGG | 0.585001 | 8.1:-52318342 | None:intergenic |
AAAACAGAGCACCAACGGCA+AGG | 0.585538 | 8.1:-52318638 | None:intergenic |
GTAGTGAGCACACCTCCGGC+TGG | 0.586869 | 8.1:+52318294 | MS.gene36035:CDS |
GGAGGAATAGCCGCTGGAGA+TGG | 0.587071 | 8.1:-52318219 | None:intergenic |
GTTGTCGTTGGTGACGGTGA+AGG | 0.587432 | 8.1:-52318171 | None:intergenic |
GGTGGTGAAACAGAGGGTGA+TGG | 0.589277 | 8.1:-52318198 | None:intergenic |
ACTGGTTGTAATTCTCAGAA+GGG | 0.589662 | 8.1:-52317348 | None:intergenic |
GGTGATGGAGTGGTTGTCGT+TGG | 0.590401 | 8.1:-52318183 | None:intergenic |
TCGTTGGTGGAAAGGATGGA+TGG | 0.594920 | 8.1:+52317317 | MS.gene36035:CDS |
GGAGTGGTTGTCGTTGGTGA+CGG | 0.597376 | 8.1:-52318177 | None:intergenic |
ACAAATGAACCACTGCTACC+CGG | 0.604696 | 8.1:-52318582 | None:intergenic |
GGTGACAAGCCACCACCACT+TGG | 0.605505 | 8.1:-52318147 | None:intergenic |
GTAGTGAGCACACCTCCAGC+CGG | 0.608290 | 8.1:+52318351 | MS.gene36035:CDS |
ATTACAACCAGTGGGCTGGA+AGG | 0.611232 | 8.1:+52317359 | MS.gene36035:CDS |
TGGTGATACAGAGTTCACTT+TGG | 0.612356 | 8.1:+52318011 | MS.gene36035:CDS |
GTCGTTGGTGACGGTGAAGG+TGG | 0.613000 | 8.1:-52318168 | None:intergenic |
GCCATAGGTCCACCGGCTGG+AGG | 0.614158 | 8.1:-52318363 | None:intergenic |
AAGCCACCACCACTTGGTGA+AGG | 0.614205 | 8.1:-52318141 | None:intergenic |
GTGAGCACACCTCCAGCCGG+TGG | 0.614961 | 8.1:+52318354 | MS.gene36035:CDS |
GGAGATGGAGATGATGCCAT+AGG | 0.617212 | 8.1:-52318321 | None:intergenic |
TCTAATTCAACTGCACCACC+GGG | 0.619239 | 8.1:+52318564 | MS.gene36035:CDS |
TTCTGAGAATTACAACCAGT+GGG | 0.619799 | 8.1:+52317351 | MS.gene36035:CDS |
GCCATAGGTCCACCAGCCGG+AGG | 0.620945 | 8.1:-52318306 | None:intergenic |
GGAACAGGGGAGCTTGCTGG+AGG | 0.623639 | 8.1:-52318237 | None:intergenic |
AGGTCCACCAGCCGGAACAG+GGG | 0.624119 | 8.1:-52318250 | None:intergenic |
GGTGCAGTTGAATTAGATCC+TGG | 0.624618 | 8.1:-52318558 | None:intergenic |
ACTGCACCACCGGGTAGCAG+TGG | 0.628398 | 8.1:+52318573 | MS.gene36035:CDS |
TTCGTGGAGTTATAACAACA+AGG | 0.629941 | 8.1:-52318101 | None:intergenic |
GATGCCATAGGTCCACCAGC+CGG | 0.631786 | 8.1:-52318309 | None:intergenic |
CTTCTGAGAATTACAACCAG+TGG | 0.634874 | 8.1:+52317350 | MS.gene36035:CDS |
GGAGAAGGAGATGAAGCCAT+AGG | 0.637297 | 8.1:-52318378 | None:intergenic |
CCAGCTCCTTCACCAGCAGG+TGG | 0.640600 | 8.1:+52318414 | MS.gene36035:CDS |
TGAAACAGAGGGTGATGGAG+TGG | 0.649812 | 8.1:-52318193 | None:intergenic |
GAATACACCAGAAAGCTCGA+AGG | 0.652876 | 8.1:-52318609 | None:intergenic |
GATGCCGTAGGTCCACCAGC+CGG | 0.653292 | 8.1:-52318258 | None:intergenic |
GGAATAGCCGCTGGAGATGG+TGG | 0.653879 | 8.1:-52318216 | None:intergenic |
CCTCCGGCTCCAGGACCCGG+GGG | 0.661807 | 8.1:+52318459 | MS.gene36035:CDS |
GGAGATGGAGATGATGCCGT+AGG | 0.662452 | 8.1:-52318270 | None:intergenic |
TCATCTCCTTCACCAAGTGG+TGG | 0.662715 | 8.1:+52318135 | MS.gene36035:CDS |
AAATCATCTCCTTCACCAAG+TGG | 0.664193 | 8.1:+52318132 | MS.gene36035:CDS |
TCGTGGAGTTATAACAACAA+GGG | 0.673218 | 8.1:-52318100 | None:intergenic |
CCAGGGGCACCAGGACCCGG+GGG | 0.673519 | 8.1:+52318492 | MS.gene36035:CDS |
TGGAGATGGTGGTGAAACAG+AGG | 0.697284 | 8.1:-52318205 | None:intergenic |
GGAGATGGTGGTGAAACAGA+GGG | 0.709029 | 8.1:-52318204 | None:intergenic |
AATGAACCACTGCTACCCGG+TGG | 0.713699 | 8.1:-52318579 | None:intergenic |
TGTTTCACCACCATCTCCAG+CGG | 0.715569 | 8.1:+52318209 | MS.gene36035:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAATAATAATAAAGTG+GGG | - | chr8.1:52317427-52317446 | None:intergenic | 10.0% |
!!! | GTATATATGAAATTAATTTT+TGG | + | chr8.1:52317593-52317612 | MS.gene36035:intron | 10.0% |
!!! | GTATTTTTTATTTTTTTAGA+AGG | + | chr8.1:52317529-52317548 | MS.gene36035:intron | 10.0% |
!! | AACAACCATAAAAAAAAAAA+AGG | - | chr8.1:52317785-52317804 | None:intergenic | 15.0% |
!!! | AAAATTTTATAGGAAAAACA+AGG | - | chr8.1:52317832-52317851 | None:intergenic | 15.0% |
!!! | ATGATCCTTTTTTTTTTTTA+TGG | + | chr8.1:52317777-52317796 | MS.gene36035:intron | 15.0% |
!!! | TTTAAGTTGCAAAATTTTAT+AGG | - | chr8.1:52317842-52317861 | None:intergenic | 15.0% |
!!! | ATGAAATTAATTTTTGGTCT+AGG | + | chr8.1:52317599-52317618 | MS.gene36035:intron | 20.0% |
!!! | TGAAATTAATTTTTGGTCTA+GGG | + | chr8.1:52317600-52317619 | MS.gene36035:intron | 20.0% |
! | AAAAGATCAAAACTGTGAAA+AGG | + | chr8.1:52318065-52318084 | MS.gene36035:CDS | 25.0% |
! | AAAGATCAAAACTGTGAAAA+GGG | + | chr8.1:52318066-52318085 | MS.gene36035:CDS | 25.0% |
!!! | ATAGTTTTCAAGTACAAGAA+GGG | + | chr8.1:52317910-52317929 | MS.gene36035:intron | 25.0% |
!!! | TATAGTTTTCAAGTACAAGA+AGG | + | chr8.1:52317909-52317928 | MS.gene36035:intron | 25.0% |
!!! | TTAGTGTTGATTTTGTTGTT+TGG | + | chr8.1:52317654-52317673 | MS.gene36035:intron | 25.0% |
ATTGAAACTGATCAAAACCA+TGG | - | chr8.1:52317483-52317502 | None:intergenic | 30.0% | |
CATCTTCGAATTTCTTGATT+GGG | - | chr8.1:52317993-52318012 | None:intergenic | 30.0% | |
TTTCCACTGATGAAATAGAA+TGG | - | chr8.1:52318048-52318067 | None:intergenic | 30.0% | |
ACTGGTTGTAATTCTCAGAA+GGG | - | chr8.1:52317351-52317370 | None:intergenic | 35.0% | |
CCAATCAAGAAATTCGAAGA+TGG | + | chr8.1:52317991-52318010 | MS.gene36035:CDS | 35.0% | |
CCATCTTCGAATTTCTTGAT+TGG | - | chr8.1:52317994-52318013 | None:intergenic | 35.0% | |
CTATGTAACATACAACTCCA+TGG | + | chr8.1:52317463-52317482 | MS.gene36035:intron | 35.0% | |
TCGTGGAGTTATAACAACAA+GGG | - | chr8.1:52318103-52318122 | None:intergenic | 35.0% | |
TTCCAAATCAGTGACACTAT+AGG | + | chr8.1:52317388-52317407 | MS.gene36035:CDS | 35.0% | |
TTCGTGGAGTTATAACAACA+AGG | - | chr8.1:52318104-52318123 | None:intergenic | 35.0% | |
! | TACCTATAGTGTCACTGATT+TGG | - | chr8.1:52317393-52317412 | None:intergenic | 35.0% |
! | TTCTGAGAATTACAACCAGT+GGG | + | chr8.1:52317351-52317370 | MS.gene36035:CDS | 35.0% |
! | TTTCAAGTACAAGAAGGGTT+CGG | + | chr8.1:52317915-52317934 | MS.gene36035:CDS | 35.0% |
AAATCATCTCCTTCACCAAG+TGG | + | chr8.1:52318132-52318151 | MS.gene36035:CDS | 40.0% | |
ATCTAATTCAACTGCACCAC+CGG | + | chr8.1:52318563-52318582 | MS.gene36035:CDS | 40.0% | |
CAAGCCTTCAAGTATTTCGT+TGG | + | chr8.1:52317301-52317320 | MS.gene36035:CDS | 40.0% | |
GTGAAGAGAACAAAGAAGAG+AGG | - | chr8.1:52317262-52317281 | None:intergenic | 40.0% | |
TCCACCAACGAAATACTTGA+AGG | - | chr8.1:52317308-52317327 | None:intergenic | 40.0% | |
TGGTGATACAGAGTTCACTT+TGG | + | chr8.1:52318011-52318030 | MS.gene36035:CDS | 40.0% | |
! | ACTCAAAAACAGAGCACCAA+CGG | - | chr8.1:52318646-52318665 | None:intergenic | 40.0% |
! | CAAGTATTTCGTTGGTGGAA+AGG | + | chr8.1:52317309-52317328 | MS.gene36035:CDS | 40.0% |
! | CACTGGTTGTAATTCTCAGA+AGG | - | chr8.1:52317352-52317371 | None:intergenic | 40.0% |
! | CTTCTGAGAATTACAACCAG+TGG | + | chr8.1:52317350-52317369 | MS.gene36035:CDS | 40.0% |
! | CTTGGTGAAGGAGATGATTT+TGG | - | chr8.1:52318132-52318151 | None:intergenic | 40.0% |
! | TATTTCGTTGGTGGAAAGGA+TGG | + | chr8.1:52317313-52317332 | MS.gene36035:CDS | 40.0% |
ACAAATGAACCACTGCTACC+CGG | - | chr8.1:52318585-52318604 | None:intergenic | 45.0% | |
AGTTCACTTTGGACAGAGCA+GGG | + | chr8.1:52318022-52318041 | MS.gene36035:CDS | 45.0% | |
GAATACACCAGAAAGCTCGA+AGG | - | chr8.1:52318612-52318631 | None:intergenic | 45.0% | |
GCCTTCAAGTATTTCGTTGG+TGG | + | chr8.1:52317304-52317323 | MS.gene36035:CDS | 45.0% | |
GGGCCATTCTATTTCATCAG+TGG | + | chr8.1:52318042-52318061 | MS.gene36035:CDS | 45.0% | |
GGTGCAGTTGAATTAGATCC+TGG | - | chr8.1:52318561-52318580 | None:intergenic | 45.0% | |
TATGGCTTCATCTCCTTCTC+CGG | + | chr8.1:52318380-52318399 | MS.gene36035:CDS | 45.0% | |
TCTAATTCAACTGCACCACC+GGG | + | chr8.1:52318564-52318583 | MS.gene36035:CDS | 45.0% | |
! | GGTGAAGGAGATGATTTTGG+TGG | - | chr8.1:52318129-52318148 | None:intergenic | 45.0% |
!!! | GATGATTTTGGTGGTGTTCG+TGG | - | chr8.1:52318120-52318139 | None:intergenic | 45.0% |
!! | AAATTAAAATAATAATAAAG+TGG | - | chr8.1:52317429-52317448 | None:intergenic | 5.0% |
!! | AATTAAAATAATAATAAAGT+GGG | - | chr8.1:52317428-52317447 | None:intergenic | 5.0% |
AGATGAAGCCATAGGTCCAC+CGG | - | chr8.1:52318373-52318392 | None:intergenic | 50.0% | |
CTCACTACTGGAGATGGAGA+TGG | - | chr8.1:52318282-52318301 | None:intergenic | 50.0% | |
GAGAATTACAACCAGTGGGC+TGG | + | chr8.1:52317355-52317374 | MS.gene36035:CDS | 50.0% | |
GAGTTCACTTTGGACAGAGC+AGG | + | chr8.1:52318021-52318040 | MS.gene36035:CDS | 50.0% | |
GGAGAAGGAGATGAAGCCAT+AGG | - | chr8.1:52318381-52318400 | None:intergenic | 50.0% | |
GGAGATGGAGATGATGCCAT+AGG | - | chr8.1:52318324-52318343 | None:intergenic | 50.0% | |
GTACAAGAAGGGTTCGGACT+CGG | + | chr8.1:52317921-52317940 | MS.gene36035:CDS | 50.0% | |
TCATCTCCTTCACCAAGTGG+TGG | + | chr8.1:52318135-52318154 | MS.gene36035:CDS | 50.0% | |
TGTAGCTCCTTCGAGCTTTC+TGG | + | chr8.1:52318602-52318621 | MS.gene36035:CDS | 50.0% | |
TGTTTCACCACCATCTCCAG+CGG | + | chr8.1:52318209-52318228 | MS.gene36035:CDS | 50.0% | |
! | AAAACAGAGCACCAACGGCA+AGG | - | chr8.1:52318641-52318660 | None:intergenic | 50.0% |
! | AAACAGAGCACCAACGGCAA+GGG | - | chr8.1:52318640-52318659 | None:intergenic | 50.0% |
! | GGAGATGGTGGTGAAACAGA+GGG | - | chr8.1:52318207-52318226 | None:intergenic | 50.0% |
! | TCGTTGGTGGAAAGGATGGA+TGG | + | chr8.1:52317317-52317336 | MS.gene36035:CDS | 50.0% |
! | TGGAGATGGTGGTGAAACAG+AGG | - | chr8.1:52318208-52318227 | None:intergenic | 50.0% |
!! | ATTACAACCAGTGGGCTGGA+AGG | + | chr8.1:52317359-52317378 | MS.gene36035:CDS | 50.0% |
!! | TGAAACAGAGGGTGATGGAG+TGG | - | chr8.1:52318196-52318215 | None:intergenic | 50.0% |
AATGAACCACTGCTACCCGG+TGG | - | chr8.1:52318582-52318601 | None:intergenic | 55.0% | |
GGAGATGGAGATGATGCCGT+AGG | - | chr8.1:52318273-52318292 | None:intergenic | 55.0% | |
GGTGGTGAAACAGAGGGTGA+TGG | - | chr8.1:52318201-52318220 | None:intergenic | 55.0% | |
GGTGTGCTCACTACTGGAGA+TGG | - | chr8.1:52318288-52318307 | None:intergenic | 55.0% | |
TATTCCGCAACCCTTGCCGT+TGG | + | chr8.1:52318627-52318646 | MS.gene36035:CDS | 55.0% | |
TCCAGTAGTGAGCACACCTC+CGG | + | chr8.1:52318290-52318309 | MS.gene36035:CDS | 55.0% | |
TCTCCTTCACCAAGTGGTGG+TGG | + | chr8.1:52318138-52318157 | MS.gene36035:CDS | 55.0% | |
TTAGATCCTGGTGACCCTGC+TGG | - | chr8.1:52318549-52318568 | None:intergenic | 55.0% | |
! | AAGCCACCACCACTTGGTGA+AGG | - | chr8.1:52318144-52318163 | None:intergenic | 55.0% |
! | GGAGTGGTTGTCGTTGGTGA+CGG | - | chr8.1:52318180-52318199 | None:intergenic | 55.0% |
!! | GGTGATGGAGTGGTTGTCGT+TGG | - | chr8.1:52318186-52318205 | None:intergenic | 55.0% |
!! | GTTGTCGTTGGTGACGGTGA+AGG | - | chr8.1:52318174-52318193 | None:intergenic | 55.0% |
ACCTGTTCCTTCCAGCCCAC+TGG | - | chr8.1:52317369-52317388 | None:intergenic | 60.0% | |
AGCACCAACGGCAAGGGTTG+CGG | - | chr8.1:52318634-52318653 | None:intergenic | 60.0% | |
CTTGCTGGAGGAATAGCCGC+TGG | - | chr8.1:52318228-52318247 | None:intergenic | 60.0% | |
GATGCCATAGGTCCACCAGC+CGG | - | chr8.1:52318312-52318331 | None:intergenic | 60.0% | |
GATGGACCACCTGCTGGTGA+AGG | - | chr8.1:52318423-52318442 | None:intergenic | 60.0% | |
GCTTCATCTCCTTCTCCGGC+AGG | + | chr8.1:52318384-52318403 | MS.gene36035:CDS | 60.0% | |
GGAATAGCCGCTGGAGATGG+TGG | - | chr8.1:52318219-52318238 | None:intergenic | 60.0% | |
GGAGGAATAGCCGCTGGAGA+TGG | - | chr8.1:52318222-52318241 | None:intergenic | 60.0% | |
GGTGACAAGCCACCACCACT+TGG | - | chr8.1:52318150-52318169 | None:intergenic | 60.0% | |
GTAGTGAGCACACCTCCAGC+CGG | + | chr8.1:52318351-52318370 | MS.gene36035:CDS | 60.0% | |
TAGGTCCACCAGCCGGAACA+GGG | - | chr8.1:52318254-52318273 | None:intergenic | 60.0% | |
TCATCTCCTTCTCCGGCAGG+TGG | + | chr8.1:52318387-52318406 | MS.gene36035:CDS | 60.0% | |
TCCAGCAAGCTCCCCTGTTC+CGG | + | chr8.1:52318239-52318258 | MS.gene36035:CDS | 60.0% | |
! | GCTGGAGGTGTGCTCACTAC+TGG | - | chr8.1:52318351-52318370 | None:intergenic | 60.0% |
! | TGTTCCGGCTGGTGGACCTA+CGG | + | chr8.1:52318254-52318273 | MS.gene36035:CDS | 60.0% |
!! | ACCAGTGGGCTGGAAGGAAC+AGG | + | chr8.1:52317365-52317384 | MS.gene36035:CDS | 60.0% |
!! | GAAGGGTTCGGACTCGGTGT+TGG | + | chr8.1:52317927-52317946 | MS.gene36035:CDS | 60.0% |
!! | GTCGTTGGTGACGGTGAAGG+TGG | - | chr8.1:52318171-52318190 | None:intergenic | 60.0% |
ACCTCCAGCCGGTGGACCTA+TGG | + | chr8.1:52318362-52318381 | MS.gene36035:CDS | 65.0% | |
ACTGCACCACCGGGTAGCAG+TGG | + | chr8.1:52318573-52318592 | MS.gene36035:CDS | 65.0% | |
AGGTCCACCAGCCGGAACAG+GGG | - | chr8.1:52318253-52318272 | None:intergenic | 65.0% | |
ATCAGGGACACCAGGACCCG+GGG | + | chr8.1:52318515-52318534 | MS.gene36035:CDS | 65.0% | |
CCACCAGCTCCTTCACCAGC+AGG | + | chr8.1:52318411-52318430 | MS.gene36035:CDS | 65.0% | |
CCACCTGCTGGTGAAGGAGC+TGG | - | chr8.1:52318417-52318436 | None:intergenic | 65.0% | |
CCAGCTCCTTCACCAGCAGG+TGG | + | chr8.1:52318414-52318433 | MS.gene36035:CDS | 65.0% | |
CCTGCTGGTGAAGGAGCTGG+TGG | - | chr8.1:52318414-52318433 | None:intergenic | 65.0% | |
GAAGCCATAGGTCCACCGGC+TGG | - | chr8.1:52318369-52318388 | None:intergenic | 65.0% | |
GATCAGGGACACCAGGACCC+GGG | + | chr8.1:52318514-52318533 | MS.gene36035:CDS | 65.0% | |
GATGCCGTAGGTCCACCAGC+CGG | - | chr8.1:52318261-52318280 | None:intergenic | 65.0% | |
GGACCACCTGCTGGGGTAGA+TGG | - | chr8.1:52318441-52318460 | None:intergenic | 65.0% | |
GGATCAGGGACACCAGGACC+CGG | + | chr8.1:52318513-52318532 | MS.gene36035:CDS | 65.0% | |
GGGGTAGATGGACCACCTGC+TGG | - | chr8.1:52318429-52318448 | None:intergenic | 65.0% | |
GGTCCATCTACCCCAGCAGG+TGG | + | chr8.1:52318435-52318454 | MS.gene36035:CDS | 65.0% | |
GGTGGTCCATCTACCCCAGC+AGG | + | chr8.1:52318432-52318451 | MS.gene36035:CDS | 65.0% | |
GTAGGTCCACCAGCCGGAAC+AGG | - | chr8.1:52318255-52318274 | None:intergenic | 65.0% | |
GTAGTGAGCACACCTCCGGC+TGG | + | chr8.1:52318294-52318313 | MS.gene36035:CDS | 65.0% | |
TACCCCAGCAGGTGGTCCTC+CGG | + | chr8.1:52318443-52318462 | MS.gene36035:CDS | 65.0% | |
TCCTGGTGTCCCTGATCCCC+CGG | - | chr8.1:52318511-52318530 | None:intergenic | 65.0% | |
! | ACCTCCGGCTGGTGGACCTA+TGG | + | chr8.1:52318305-52318324 | MS.gene36035:CDS | 65.0% |
! | GCCGGAGGTGTGCTCACTAC+TGG | - | chr8.1:52318294-52318313 | None:intergenic | 65.0% |
!! | GGAACAGGGGAGCTTGCTGG+AGG | - | chr8.1:52318240-52318259 | None:intergenic | 65.0% |
AGCCGGAGGACCACCTGCTG+GGG | - | chr8.1:52318448-52318467 | None:intergenic | 70.0% | |
AGCTCCCCTGTTCCGGCTGG+TGG | + | chr8.1:52318246-52318265 | MS.gene36035:CDS | 70.0% | |
CACCAGGACCCGGGGGATCA+GGG | + | chr8.1:52318499-52318518 | MS.gene36035:CDS | 70.0% | |
CCTGGTGTCCCTGATCCCCC+GGG | - | chr8.1:52318510-52318529 | None:intergenic | 70.0% | |
GAGCCGGAGGACCACCTGCT+GGG | - | chr8.1:52318449-52318468 | None:intergenic | 70.0% | |
GCAAGCTCCCCTGTTCCGGC+TGG | + | chr8.1:52318243-52318262 | MS.gene36035:CDS | 70.0% | |
GCCATAGGTCCACCAGCCGG+AGG | - | chr8.1:52318309-52318328 | None:intergenic | 70.0% | |
GCCGGAACAGGGGAGCTTGC+TGG | - | chr8.1:52318243-52318262 | None:intergenic | 70.0% | |
GCTGCTCCAGCAGGGTCACC+AGG | + | chr8.1:52318540-52318559 | MS.gene36035:CDS | 70.0% | |
GGAGCTGGTGGTCCACCTGC+CGG | - | chr8.1:52318402-52318421 | None:intergenic | 70.0% | |
GGTGGTCCACCTGCCGGAGA+AGG | - | chr8.1:52318396-52318415 | None:intergenic | 70.0% | |
GTGAGCACACCTCCAGCCGG+TGG | + | chr8.1:52318354-52318373 | MS.gene36035:CDS | 70.0% | |
GTGAGCACACCTCCGGCTGG+TGG | + | chr8.1:52318297-52318316 | MS.gene36035:CDS | 70.0% | |
TCAGGGACACCAGGACCCGG+GGG | + | chr8.1:52318516-52318535 | MS.gene36035:CDS | 70.0% | |
! | GCCATAGGTCCACCGGCTGG+AGG | - | chr8.1:52318366-52318385 | None:intergenic | 70.0% |
!! | ACTCCAGGGGCACCAGGACC+CGG | + | chr8.1:52318489-52318508 | MS.gene36035:CDS | 70.0% |
CCCGGGGGATCAGGGACACC+AGG | + | chr8.1:52318507-52318526 | MS.gene36035:CDS | 75.0% | |
CCCTGCTGGAGCAGCTCCCC+CGG | - | chr8.1:52318535-52318554 | None:intergenic | 75.0% | |
CCCTGGAGTCGCTGCTCCCC+CGG | - | chr8.1:52318478-52318497 | None:intergenic | 75.0% | |
CCGGGGGAGCAGCGACTCCA+GGG | + | chr8.1:52318475-52318494 | MS.gene36035:CDS | 75.0% | |
CCGGGGGAGCTGCTCCAGCA+GGG | + | chr8.1:52318532-52318551 | MS.gene36035:CDS | 75.0% | |
CCTGCTGGAGCAGCTCCCCC+GGG | - | chr8.1:52318534-52318553 | None:intergenic | 75.0% | |
CCTGGAGTCGCTGCTCCCCC+GGG | - | chr8.1:52318477-52318496 | None:intergenic | 75.0% | |
CGGGGGAGCAGCGACTCCAG+GGG | + | chr8.1:52318476-52318495 | MS.gene36035:CDS | 75.0% | |
GCACCAGGACCCGGGGGATC+AGG | + | chr8.1:52318498-52318517 | MS.gene36035:CDS | 75.0% | |
GCAGGTGGTCCTCCGGCTCC+AGG | + | chr8.1:52318450-52318469 | MS.gene36035:CDS | 75.0% | |
GGAGCCGGAGGACCACCTGC+TGG | - | chr8.1:52318450-52318469 | None:intergenic | 75.0% | |
GGTCCTCCGGCTCCAGGACC+CGG | + | chr8.1:52318456-52318475 | MS.gene36035:CDS | 75.0% | |
GTCCCTGATCCCCCGGGTCC+TGG | - | chr8.1:52318504-52318523 | None:intergenic | 75.0% | |
GTCCTCCGGCTCCAGGACCC+GGG | + | chr8.1:52318457-52318476 | MS.gene36035:CDS | 75.0% | |
TCCTCCGGCTCCAGGACCCG+GGG | + | chr8.1:52318458-52318477 | MS.gene36035:CDS | 75.0% | |
!! | CTCCAGGGGCACCAGGACCC+GGG | + | chr8.1:52318490-52318509 | MS.gene36035:CDS | 75.0% |
!! | GCAGCGACTCCAGGGGCACC+AGG | + | chr8.1:52318483-52318502 | MS.gene36035:CDS | 75.0% |
!! | TCCAGGGGCACCAGGACCCG+GGG | + | chr8.1:52318491-52318510 | MS.gene36035:CDS | 75.0% |
! | CCCGGGGGAGCAGCGACTCC+AGG | + | chr8.1:52318474-52318493 | MS.gene36035:CDS | 80.0% |
! | CCCGGGGGAGCTGCTCCAGC+AGG | + | chr8.1:52318531-52318550 | MS.gene36035:CDS | 80.0% |
! | CCTCCGGCTCCAGGACCCGG+GGG | + | chr8.1:52318459-52318478 | MS.gene36035:CDS | 80.0% |
! | GCTCCCCCGGGTCCTGGAGC+CGG | - | chr8.1:52318465-52318484 | None:intergenic | 80.0% |
! | GGAGCAGCTCCCCCGGGTCC+TGG | - | chr8.1:52318528-52318547 | None:intergenic | 80.0% |
! | GTCGCTGCTCCCCCGGGTCC+TGG | - | chr8.1:52318471-52318490 | None:intergenic | 80.0% |
!!! | CCAGGGGCACCAGGACCCGG+GGG | + | chr8.1:52318492-52318511 | MS.gene36035:CDS | 80.0% |
! | CCCCCGGGTCCTGGAGCCGG+AGG | - | chr8.1:52318462-52318481 | None:intergenic | 85.0% |
! | CCCCCGGGTCCTGGTGCCCC+TGG | - | chr8.1:52318495-52318514 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 52317244 | 52318671 | 52317244 | ID=MS.gene36035 |
chr8.1 | mRNA | 52317244 | 52318671 | 52317244 | ID=MS.gene36035.t1;Parent=MS.gene36035 |
chr8.1 | exon | 52317244 | 52317409 | 52317244 | ID=MS.gene36035.t1.exon1;Parent=MS.gene36035.t1 |
chr8.1 | CDS | 52317244 | 52317409 | 52317244 | ID=cds.MS.gene36035.t1;Parent=MS.gene36035.t1 |
chr8.1 | exon | 52317914 | 52318671 | 52317914 | ID=MS.gene36035.t1.exon2;Parent=MS.gene36035.t1 |
chr8.1 | CDS | 52317914 | 52318671 | 52317914 | ID=cds.MS.gene36035.t1;Parent=MS.gene36035.t1 |
Gene Sequence |
Protein sequence |