Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057668.t1 | RHN61547.1 | 98.3 | 652 | 11 | 0 | 1 | 652 | 35 | 686 | 0.00E+00 | 1216.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057668.t1 | Q9UT00 | 22.8 | 430 | 268 | 15 | 118 | 523 | 176 | 565 | 3.5e-14 | 81.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057668.t1 | A0A396IFG1 | 98.3 | 652 | 11 | 0 | 1 | 652 | 35 | 686 | 0.0e+00 | 1216.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055505 | MS.gene057668 | 0.810884 | 9.23E-51 | -1.69E-46 |
| MS.gene057199 | MS.gene057668 | 0.835932 | 1.26E-56 | -1.69E-46 |
| MS.gene057668 | MS.gene059807 | 0.821141 | 4.73E-53 | -1.69E-46 |
| MS.gene057668 | MS.gene061224 | 0.810272 | 1.25E-50 | -1.69E-46 |
| MS.gene057668 | MS.gene06229 | 0.816302 | 5.93E-52 | -1.69E-46 |
| MS.gene057668 | MS.gene065164 | 0.811988 | 5.31E-51 | -1.69E-46 |
| MS.gene057668 | MS.gene065166 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene057668 | MS.gene068556 | 0.83283 | 7.56E-56 | -1.69E-46 |
| MS.gene057668 | MS.gene06866 | 0.832966 | 6.99E-56 | -1.69E-46 |
| MS.gene057668 | MS.gene068746 | 0.843422 | 1.42E-58 | -1.69E-46 |
| MS.gene057668 | MS.gene068946 | 0.804259 | 2.35E-49 | -1.69E-46 |
| MS.gene057668 | MS.gene069384 | 0.820769 | 5.76E-53 | -1.69E-46 |
| MS.gene057668 | MS.gene06987 | 0.828311 | 9.65E-55 | -1.69E-46 |
| MS.gene057668 | MS.gene070534 | 0.852846 | 3.53E-61 | -1.69E-46 |
| MS.gene057668 | MS.gene071912 | 0.807333 | 5.32E-50 | -1.69E-46 |
| MS.gene057668 | MS.gene073824 | 0.84076 | 7.16E-58 | -1.69E-46 |
| MS.gene057668 | MS.gene21790 | 0.804915 | 1.72E-49 | -1.69E-46 |
| MS.gene057668 | MS.gene22970 | 0.86421 | 1.43E-64 | -1.69E-46 |
| MS.gene057668 | MS.gene26111 | 0.806502 | 7.98E-50 | -1.69E-46 |
| MS.gene057668 | MS.gene26810 | 0.814957 | 1.18E-51 | -1.69E-46 |
| MS.gene057668 | MS.gene28654 | 0.858787 | 6.48E-63 | -1.69E-46 |
| MS.gene057668 | MS.gene30866 | 0.83815 | 3.41E-57 | -1.69E-46 |
| MS.gene057668 | MS.gene36035 | 0.801212 | 1.00E-48 | -1.69E-46 |
| MS.gene057668 | MS.gene42747 | 0.813551 | 2.42E-51 | -1.69E-46 |
| MS.gene057668 | MS.gene47723 | 0.811851 | 5.69E-51 | -1.69E-46 |
| MS.gene057668 | MS.gene48018 | 0.817025 | 4.08E-52 | -1.69E-46 |
| MS.gene057668 | MS.gene52114 | 0.97841 | 9.09E-146 | -1.69E-46 |
| MS.gene057668 | MS.gene66800 | 0.82555 | 4.41E-54 | -1.69E-46 |
| MS.gene057668 | MS.gene74977 | -0.803518 | 3.35E-49 | -1.69E-46 |
| MS.gene057668 | MS.gene81642 | 0.855128 | 7.76E-62 | -1.69E-46 |
| MS.gene057668 | MS.gene83279 | 0.841427 | 4.78E-58 | -1.69E-46 |
| MS.gene057668 | MS.gene89744 | 0.841336 | 5.05E-58 | -1.69E-46 |
| MS.gene057668 | MS.gene93035 | 0.820378 | 7.08E-53 | -1.69E-46 |
| MS.gene057668 | MS.gene95702 | 0.804551 | 2.05E-49 | -1.69E-46 |
| MS.gene057668 | MS.gene98556 | 0.836677 | 8.13E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057668.t1 | MTR_4g074370 | 95.903 | 659 | 17 | 2 | 1 | 652 | 35 | 690 | 0.0 | 1254 |
| MS.gene057668.t1 | MTR_4g108040 | 93.333 | 330 | 10 | 3 | 331 | 652 | 21 | 346 | 0.0 | 522 |
| MS.gene057668.t1 | MTR_2g072180 | 22.477 | 436 | 281 | 14 | 121 | 539 | 33 | 428 | 2.30e-16 | 83.6 |
| MS.gene057668.t1 | MTR_2g072180 | 22.674 | 344 | 228 | 10 | 207 | 539 | 22 | 338 | 1.79e-13 | 74.3 |
| MS.gene057668.t1 | MTR_1g094810 | 24.915 | 293 | 189 | 9 | 170 | 459 | 69 | 333 | 3.49e-13 | 72.8 |
| MS.gene057668.t1 | MTR_4g073400 | 22.021 | 386 | 255 | 15 | 142 | 518 | 47 | 395 | 3.24e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057668.t1 | AT3G19830 | 68.000 | 650 | 158 | 10 | 32 | 652 | 65 | 693 | 0.0 | 834 |
| MS.gene057668.t1 | AT3G19830 | 68.000 | 650 | 158 | 10 | 32 | 652 | 65 | 693 | 0.0 | 834 |
| MS.gene057668.t1 | AT3G19830 | 68.000 | 650 | 158 | 10 | 32 | 652 | 65 | 693 | 0.0 | 834 |
| MS.gene057668.t1 | AT3G19830 | 68.000 | 650 | 158 | 10 | 32 | 652 | 65 | 693 | 0.0 | 834 |
| MS.gene057668.t1 | AT1G50260 | 68.203 | 629 | 168 | 9 | 38 | 652 | 65 | 675 | 0.0 | 759 |
| MS.gene057668.t1 | AT1G50260 | 62.321 | 629 | 164 | 9 | 38 | 652 | 65 | 634 | 0.0 | 672 |
| MS.gene057668.t1 | AT3G61050 | 22.314 | 363 | 249 | 9 | 170 | 526 | 68 | 403 | 1.06e-11 | 68.2 |
| MS.gene057668.t1 | AT3G61050 | 22.314 | 363 | 249 | 9 | 170 | 526 | 68 | 403 | 1.06e-11 | 68.2 |
| MS.gene057668.t1 | AT1G53590 | 21.554 | 399 | 262 | 13 | 110 | 492 | 22 | 385 | 5.94e-11 | 66.2 |
Find 149 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCGTTTGTTCAACTTAA+TGG | 0.132446 | 4.4:-34988465 | MS.gene057668:CDS |
| TTAAGCCTTTCTCTGAAATT+TGG | 0.173257 | 4.4:-34988641 | MS.gene057668:CDS |
| AATTCGCTAATTCTGCTAAA+AGG | 0.177736 | 4.4:-34990131 | MS.gene057668:CDS |
| TTAGCAGAATTAGCGAATTT+TGG | 0.179251 | 4.4:+34990135 | None:intergenic |
| ATGCAGGGTCGGCCTTATTT+TGG | 0.236237 | 4.4:-34984551 | MS.gene057668:intron |
| AGAATCATTTATGGATGTTT+TGG | 0.240494 | 4.4:-34984853 | MS.gene057668:CDS |
| GGACTTGAGAATTGGATTAT+TGG | 0.248656 | 4.4:-34989679 | MS.gene057668:CDS |
| GCGCCCCTGGAATGCCAATT+TGG | 0.250515 | 4.4:-34986670 | MS.gene057668:CDS |
| GATAATTCTGAAGGTTCTTC+TGG | 0.258885 | 4.4:-34984687 | MS.gene057668:CDS |
| CTTGGGTCGGAGCTGCTTCA+TGG | 0.263197 | 4.4:-34988529 | MS.gene057668:CDS |
| GACAGTTCAAACTTGATCTT+TGG | 0.263404 | 4.4:+34988491 | None:intergenic |
| GGCAGATAAAGAATCATTTA+TGG | 0.272115 | 4.4:-34984862 | MS.gene057668:CDS |
| CCAGCAACGTTTCGGTTAAT+AGG | 0.284701 | 4.4:+34989919 | None:intergenic |
| TTTGAATTGAAGATGAATAA+AGG | 0.292974 | 4.4:+34990181 | None:intergenic |
| GACTTGAGAATTGGATTATT+GGG | 0.298406 | 4.4:-34989678 | MS.gene057668:CDS |
| ACGGCCAAACAAAATTGTTT+TGG | 0.302867 | 4.4:-34987599 | MS.gene057668:CDS |
| TGATTCCAAATTGGCATTCC+AGG | 0.305676 | 4.4:+34986665 | None:intergenic |
| TTTCGTTTGTTCAACTTAAT+GGG | 0.307586 | 4.4:-34988464 | MS.gene057668:intron |
| GGGATGAACCTTTGTCTGTT+AGG | 0.310807 | 4.4:-34989579 | MS.gene057668:CDS |
| TTTACCAAAGGTTTGGATAA+TGG | 0.313194 | 4.4:-34984777 | MS.gene057668:CDS |
| CAGTATACCTAAGGCCTATC+TGG | 0.314663 | 4.4:+34988681 | None:intergenic |
| GGATTTGCAGATTTGACTAT+TGG | 0.318186 | 4.4:-34986492 | MS.gene057668:CDS |
| CCTATTAACCGAAACGTTGC+TGG | 0.325852 | 4.4:-34989919 | MS.gene057668:CDS |
| GGGATAGTAGCATCTGAAAC+AGG | 0.328126 | 4.4:-34984801 | MS.gene057668:CDS |
| TCAACCCTTTCAACATAATC+AGG | 0.328171 | 4.4:+34989622 | None:intergenic |
| AACAACACCTGATTCCAAAT+TGG | 0.330831 | 4.4:+34986656 | None:intergenic |
| AATCACAGCAAGCCAAAATA+AGG | 0.343122 | 4.4:+34984539 | None:intergenic |
| GAGATTAAGCAGTTCTCGTT+AGG | 0.346911 | 4.4:-34989601 | MS.gene057668:CDS |
| GAGGGATTCACAGGTTCAAT+TGG | 0.357792 | 4.4:-34990028 | MS.gene057668:CDS |
| AACAGGGTTTACCAAAGGTT+TGG | 0.361166 | 4.4:-34984784 | MS.gene057668:CDS |
| GGATAAGCTTAGAACTCAAT+TGG | 0.361720 | 4.4:-34989968 | MS.gene057668:CDS |
| CAGATAGGCCTTAGGTATAC+TGG | 0.362284 | 4.4:-34988680 | MS.gene057668:CDS |
| GAATGGGTGAATATGGTGTT+AGG | 0.371051 | 4.4:-34989727 | MS.gene057668:CDS |
| TTCTTCAAATCATCAATAAC+AGG | 0.371788 | 4.4:+34989646 | None:intergenic |
| TAAATCTACTGTAAGAAGTT+TGG | 0.378740 | 4.4:+34987636 | None:intergenic |
| GTCGGTTGAATGGGTGAATA+TGG | 0.388145 | 4.4:-34989734 | MS.gene057668:CDS |
| ATAGAGGTGGACTTGAGAAT+TGG | 0.388213 | 4.4:-34989687 | MS.gene057668:CDS |
| TTAATAGGAGGCGATGGAAT+CGG | 0.391102 | 4.4:+34989934 | None:intergenic |
| ATTCGCTAATTCTGCTAAAA+GGG | 0.391915 | 4.4:-34990130 | MS.gene057668:CDS |
| GTTCTAAGCTTATCCACAAT+TGG | 0.393077 | 4.4:+34989976 | None:intergenic |
| ATCCCAGAGCGTCCTTAACT+TGG | 0.393432 | 4.4:+34986511 | None:intergenic |
| TTGGATAATGGCTCAAATAC+AGG | 0.400332 | 4.4:-34984765 | MS.gene057668:CDS |
| TTGAATTGAAGATGAATAAA+GGG | 0.400506 | 4.4:+34990182 | None:intergenic |
| TAATAGGAGGCGATGGAATC+GGG | 0.401713 | 4.4:+34989935 | None:intergenic |
| ACACCAACAGGTACAACAAT+TGG | 0.410509 | 4.4:+34988611 | None:intergenic |
| TGAGCCATTATCCAAACCTT+TGG | 0.412143 | 4.4:+34984773 | None:intergenic |
| TCGGGTTGGAAACAAGCATA+TGG | 0.412541 | 4.4:+34986553 | None:intergenic |
| ATTGATTCCGCATTGGCAAC+AGG | 0.413301 | 4.4:+34984723 | None:intergenic |
| GTCGTTGATGGTGTTAAATC+TGG | 0.415146 | 4.4:-34987532 | MS.gene057668:CDS |
| TGGAATGCCAATTTGGAATC+AGG | 0.417628 | 4.4:-34986663 | MS.gene057668:intron |
| ACTACTGTCATTGGCGCCCC+TGG | 0.419613 | 4.4:-34986683 | MS.gene057668:CDS |
| TGACATTGATGGTGAACTTT+GGG | 0.426042 | 4.4:-34988579 | MS.gene057668:CDS |
| ATAAATGATTCTTTATCTGC+CGG | 0.434471 | 4.4:+34984864 | None:intergenic |
| CCATATGTCATTCTTAGCCT+TGG | 0.439251 | 4.4:-34986740 | MS.gene057668:CDS |
| TAATACCAAATTTCAGAGAA+AGG | 0.439413 | 4.4:+34988636 | None:intergenic |
| ACTGTTGGTCCTGTCGTTGA+TGG | 0.440638 | 4.4:-34987544 | MS.gene057668:CDS |
| ATTAATACCAACAGCTCCTT+GGG | 0.443767 | 4.4:-34988546 | MS.gene057668:CDS |
| TATCCAAGTTAAGGACGCTC+TGG | 0.445536 | 4.4:-34986514 | MS.gene057668:CDS |
| GAAACTTACATCGAGAGAAC+TGG | 0.447259 | 4.4:+34988022 | None:intergenic |
| ATTAAGTTGAACAAACGAAA+TGG | 0.449004 | 4.4:+34988467 | None:intergenic |
| GACAGAATTGTTGCTTTACA+AGG | 0.450629 | 4.4:-34985080 | MS.gene057668:CDS |
| TCAAAATCTCGAACACCAAC+AGG | 0.452033 | 4.4:+34988599 | None:intergenic |
| GTCTGAAACATCTATATCAA+TGG | 0.453813 | 4.4:+34984953 | None:intergenic |
| TTGGGTCGGAGCTGCTTCAT+GGG | 0.457177 | 4.4:-34988528 | MS.gene057668:CDS |
| CAAACAAACCAGCAACGTTT+CGG | 0.458309 | 4.4:+34989911 | None:intergenic |
| AACAGTCAAACTACTGTCAT+TGG | 0.458505 | 4.4:-34986692 | MS.gene057668:CDS |
| TTGACATTGATGGTGAACTT+TGG | 0.460520 | 4.4:-34988580 | MS.gene057668:CDS |
| AATGATGAACTTGAAGTTGA+AGG | 0.462989 | 4.4:-34990066 | MS.gene057668:CDS |
| GAAGTTAAGTATCCAAGTTA+AGG | 0.473337 | 4.4:-34986523 | MS.gene057668:CDS |
| GATTAATACCAACAGCTCCT+TGG | 0.474206 | 4.4:-34988547 | MS.gene057668:CDS |
| GCAGATTTGACTATTGGTAC+TGG | 0.474231 | 4.4:-34986486 | MS.gene057668:CDS |
| TTTCAGATGCTACTATCCCT+TGG | 0.481868 | 4.4:+34984805 | None:intergenic |
| AGGGATTCACAGGTTCAATT+GGG | 0.482120 | 4.4:-34990027 | MS.gene057668:CDS |
| AGATTAAGCAGTTCTCGTTA+GGG | 0.484229 | 4.4:-34989600 | MS.gene057668:CDS |
| GAGGAAAGAGTCGGTTGAAT+GGG | 0.494576 | 4.4:-34989743 | MS.gene057668:CDS |
| TTGTGGAAGGTTTATAGAGG+TGG | 0.495319 | 4.4:-34989700 | MS.gene057668:CDS |
| CCAAGGCTAAGAATGACATA+TGG | 0.496475 | 4.4:+34986740 | None:intergenic |
| GATTCCAAATTGGCATTCCA+GGG | 0.496914 | 4.4:+34986666 | None:intergenic |
| AGAGGAAAGAGTCGGTTGAA+TGG | 0.499889 | 4.4:-34989744 | MS.gene057668:CDS |
| AAGTTGTGGAAGGTTTATAG+AGG | 0.500887 | 4.4:-34989703 | MS.gene057668:CDS |
| GATAAGCTTAGAACTCAATT+GGG | 0.503313 | 4.4:-34989967 | MS.gene057668:CDS |
| ATTCCAATTGTTGTACCTGT+TGG | 0.505566 | 4.4:-34988614 | MS.gene057668:CDS |
| CTAGATACCAGATAGGCCTT+AGG | 0.509703 | 4.4:-34988688 | MS.gene057668:intron |
| GGTGTTAGGGAAGTTGTGGA+AGG | 0.511394 | 4.4:-34989713 | MS.gene057668:CDS |
| TTTGGCCGTACAAATAGTCT+AGG | 0.514653 | 4.4:+34987613 | None:intergenic |
| AGGCGGTGAACGTGAATTGA+GGG | 0.516382 | 4.4:-34990046 | MS.gene057668:CDS |
| AGCAAATGTCACTGATACGA+TGG | 0.516797 | 4.4:-34984907 | MS.gene057668:CDS |
| CAGAATTGTTGCTTTACAAG+GGG | 0.518230 | 4.4:-34985078 | MS.gene057668:CDS |
| AGAAGCCTGATTATGTTGAA+AGG | 0.533351 | 4.4:-34989627 | MS.gene057668:CDS |
| AAGGCGGTGAACGTGAATTG+AGG | 0.533789 | 4.4:-34990047 | MS.gene057668:CDS |
| TGAACTCTCCGTCACTCTTG+TGG | 0.534872 | 4.4:-34987476 | MS.gene057668:CDS |
| ACGACAGGACCAACAGTGAC+GGG | 0.535880 | 4.4:+34987550 | None:intergenic |
| ATTTACCTAGACTATTTGTA+CGG | 0.536468 | 4.4:-34987618 | MS.gene057668:CDS |
| AATGGGTGAATATGGTGTTA+GGG | 0.536900 | 4.4:-34989726 | MS.gene057668:CDS |
| AGTAAGAGATTCTGCGTACC+CGG | 0.537398 | 4.4:-34984883 | MS.gene057668:CDS |
| GCTAACATATAAAGCATATG+TGG | 0.540309 | 4.4:-34985009 | MS.gene057668:CDS |
| TAAATGATTCTTTATCTGCC+GGG | 0.543828 | 4.4:+34984865 | None:intergenic |
| TAAAGCATATGTGGAGGATG+AGG | 0.544623 | 4.4:-34985000 | MS.gene057668:CDS |
| CATGAAGCAGCTCCGACCCA+AGG | 0.547246 | 4.4:+34988530 | None:intergenic |
| TTCGAGAAGGGAAAAGCTGT+TGG | 0.550160 | 4.4:-34987574 | MS.gene057668:CDS |
| AAAGCAACAATTCTGTCTGT+TGG | 0.552705 | 4.4:+34985086 | None:intergenic |
| GCTGTTGGTCCCGTCACTGT+TGG | 0.556112 | 4.4:-34987559 | MS.gene057668:CDS |
| ACGTGAATTGAGGGATTCAC+AGG | 0.556743 | 4.4:-34990037 | MS.gene057668:CDS |
| ATATGGTGTTAGGGAAGTTG+TGG | 0.559551 | 4.4:-34989717 | MS.gene057668:CDS |
| GAAGCCTGATTATGTTGAAA+GGG | 0.562405 | 4.4:-34989626 | MS.gene057668:CDS |
| GAGGAACAAAGTTAGTAGTG+AGG | 0.565375 | 4.4:-34989833 | MS.gene057668:CDS |
| ATCCAAGTTAAGGACGCTCT+GGG | 0.566547 | 4.4:-34986513 | MS.gene057668:CDS |
| AACGACAGGACCAACAGTGA+CGG | 0.567745 | 4.4:+34987549 | None:intergenic |
| CGTCTGGGGAGATATTGCTT+AGG | 0.577276 | 4.4:-34985031 | MS.gene057668:CDS |
| TGCGTATGGTTTGATCTCCA+AGG | 0.577385 | 4.4:+34986723 | None:intergenic |
| AGGAGGAATTGATTCCGCAT+TGG | 0.577509 | 4.4:+34984716 | None:intergenic |
| CCTAGTGCTGATAATTCTGA+AGG | 0.579399 | 4.4:-34984696 | MS.gene057668:CDS |
| TTTCGGTTAATAGGAGGCGA+TGG | 0.580978 | 4.4:+34989928 | None:intergenic |
| ATTGTTAGCGAAGAATTCCA+AGG | 0.582227 | 4.4:-34984822 | MS.gene057668:CDS |
| GCTCCGACCCAAGGAGCTGT+TGG | 0.582843 | 4.4:+34988539 | None:intergenic |
| CCTTCAGAATTATCAGCACT+AGG | 0.583333 | 4.4:+34984696 | None:intergenic |
| ACAGAATTGTTGCTTTACAA+GGG | 0.587625 | 4.4:-34985079 | MS.gene057668:CDS |
| TTAATTGCTGTCAATATCAG+TGG | 0.589341 | 4.4:-34984501 | MS.gene057668:CDS |
| GAAGGAAACATGGATTCTGT+TGG | 0.589437 | 4.4:-34987499 | MS.gene057668:CDS |
| GCAACGTTTCGGTTAATAGG+AGG | 0.597078 | 4.4:+34989922 | None:intergenic |
| AGAAATGCAAGAAGGAAACA+TGG | 0.598978 | 4.4:-34987509 | MS.gene057668:CDS |
| TGGATAATGGCTCAAATACA+GGG | 0.600302 | 4.4:-34984764 | MS.gene057668:CDS |
| GATTAAGCAGTTCTCGTTAG+GGG | 0.603380 | 4.4:-34989599 | MS.gene057668:CDS |
| GATTTAACACCATCAACGAC+AGG | 0.604084 | 4.4:+34987535 | None:intergenic |
| TCTGAAACAGGGTTTACCAA+AGG | 0.606194 | 4.4:-34984789 | MS.gene057668:CDS |
| GGATTTGCAGAGGAAAGAGT+CGG | 0.606583 | 4.4:-34989752 | MS.gene057668:CDS |
| TCAACATTCCTAACAGACAA+AGG | 0.608428 | 4.4:+34989571 | None:intergenic |
| AATTCTGAAGGTTCTTCTGG+AGG | 0.615378 | 4.4:-34984684 | MS.gene057668:intron |
| TCGAGCATCCACAAGAGTGA+CGG | 0.615531 | 4.4:+34987468 | None:intergenic |
| TTTACGAAAGGGCTCGTCTG+GGG | 0.616659 | 4.4:-34985045 | MS.gene057668:CDS |
| CTGTTAGGAATGTTGAACGT+AGG | 0.617986 | 4.4:-34989564 | MS.gene057668:CDS |
| GCAAATGTCACTGATACGAT+GGG | 0.619729 | 4.4:-34984906 | MS.gene057668:CDS |
| TTCGCTAATTCTGCTAAAAG+GGG | 0.623857 | 4.4:-34990129 | MS.gene057668:CDS |
| GAGCACCTCCAGTATACCTA+AGG | 0.624172 | 4.4:+34988672 | None:intergenic |
| AAATCTGGAGAAATGCAAGA+AGG | 0.625821 | 4.4:-34987517 | MS.gene057668:CDS |
| AAAATCTCCTGTTGCCAATG+CGG | 0.628618 | 4.4:-34984730 | MS.gene057668:CDS |
| TTTGACTATTGGTACTGGAG+AGG | 0.632633 | 4.4:-34986481 | MS.gene057668:intron |
| AACATATAAAGCATATGTGG+AGG | 0.636889 | 4.4:-34985006 | MS.gene057668:CDS |
| ATACCAACAGCTCCTTGGGT+CGG | 0.637925 | 4.4:-34988542 | MS.gene057668:CDS |
| TTGTTAGCGAAGAATTCCAA+GGG | 0.640177 | 4.4:-34984821 | MS.gene057668:CDS |
| GGATAGTAGCATCTGAAACA+GGG | 0.653128 | 4.4:-34984800 | MS.gene057668:CDS |
| ATTCCAAATTGGCATTCCAG+GGG | 0.656517 | 4.4:+34986667 | None:intergenic |
| AGAATTGTTGCTTTACAAGG+GGG | 0.665731 | 4.4:-34985077 | MS.gene057668:CDS |
| CATACTGTAAATCATTGACA+CGG | 0.674498 | 4.4:+34989533 | None:intergenic |
| GGAAGATGACAAGACTGAGG+AGG | 0.675289 | 4.4:-34984979 | MS.gene057668:CDS |
| TCAGAATTATCAGCACTAGG+AGG | 0.678287 | 4.4:+34984699 | None:intergenic |
| TGAGGAAGATGACAAGACTG+AGG | 0.700576 | 4.4:-34984982 | MS.gene057668:CDS |
| ATAGGCCTTAGGTATACTGG+AGG | 0.717784 | 4.4:-34988677 | MS.gene057668:CDS |
| GATGAACTTGAAGTTGAAGG+CGG | 0.752430 | 4.4:-34990063 | MS.gene057668:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATGAAAAAAAAAAAAAAA+GGG | + | chr4.4:34985586-34985605 | None:intergenic | 10.0% |
| !!! | ATAGTTTTTTTTTTTTTGAT+AGG | - | chr4.4:34986547-34986566 | MS.gene057668:CDS | 10.0% |
| !! | AAAACAAATATAAGACAAAA+TGG | + | chr4.4:34987844-34987863 | None:intergenic | 15.0% |
| !! | AAACAAATATAAGACAAAAT+GGG | + | chr4.4:34987843-34987862 | None:intergenic | 15.0% |
| !! | AAATAAAAAAAAATTGAGTG+GGG | + | chr4.4:34987938-34987957 | None:intergenic | 15.0% |
| !! | AACACAATAAATATTTAATC+TGG | + | chr4.4:34986908-34986927 | None:intergenic | 15.0% |
| !! | AGAAATACAATTACTAAAAA+TGG | + | chr4.4:34985922-34985941 | None:intergenic | 15.0% |
| !! | CAAATAAAAAAAAATTGAGT+GGG | + | chr4.4:34987939-34987958 | None:intergenic | 15.0% |
| !! | CCAATGAAAAAAAAAAAAAA+AGG | + | chr4.4:34985587-34985606 | None:intergenic | 15.0% |
| !! | GCTTAAATTATTTAATCTTA+CGG | - | chr4.4:34988735-34988754 | MS.gene057668:intron | 15.0% |
| !! | TGAGAAAATATTTGAAAAAT+TGG | + | chr4.4:34988497-34988516 | None:intergenic | 15.0% |
| !! | TTGTAAATGCATATTTAAAA+TGG | - | chr4.4:34986780-34986799 | MS.gene057668:intron | 15.0% |
| !!! | AAATATGTATTTTAAATGCA+AGG | + | chr4.4:34986601-34986620 | None:intergenic | 15.0% |
| !!! | AATGATTTGTTTGTTTTTAT+TGG | - | chr4.4:34987767-34987786 | MS.gene057668:intron | 15.0% |
| !!! | ATATCTATAACATGTATTTT+TGG | - | chr4.4:34988471-34988490 | MS.gene057668:CDS | 15.0% |
| !!! | ATTTTTAGTAATTGTATTTC+TGG | - | chr4.4:34985921-34985940 | MS.gene057668:intron | 15.0% |
| !!! | CCTTTTTTTTTTTTTTTCAT+TGG | - | chr4.4:34985584-34985603 | MS.gene057668:intron | 15.0% |
| !!! | TAGATTTTACCAAAAAAATA+AGG | + | chr4.4:34987286-34987305 | None:intergenic | 15.0% |
| !!! | TTTTATCCTCTAATATTATT+TGG | - | chr4.4:34987462-34987481 | MS.gene057668:CDS | 15.0% |
| !! | AACAAATATAAGACAAAATG+GGG | + | chr4.4:34987842-34987861 | None:intergenic | 20.0% |
| !! | ATCAAAATTAAAATACCAGA+TGG | + | chr4.4:34986526-34986545 | None:intergenic | 20.0% |
| !! | GCAAATAAAAAAAAATTGAG+TGG | + | chr4.4:34987940-34987959 | None:intergenic | 20.0% |
| !! | TAAATTATTTAATCTTACGG+AGG | - | chr4.4:34988738-34988757 | MS.gene057668:intron | 20.0% |
| !! | TAGATGAGTTATATTATTAG+TGG | - | chr4.4:34988694-34988713 | MS.gene057668:intron | 20.0% |
| !! | TTGAATTGAAGATGAATAAA+GGG | + | chr4.4:34984543-34984562 | None:intergenic | 20.0% |
| !! | TTTATTGTGTTAATCGTAAA+TGG | - | chr4.4:34986917-34986936 | MS.gene057668:intron | 20.0% |
| !! | TTTGAATTGAAGATGAATAA+AGG | + | chr4.4:34984544-34984563 | None:intergenic | 20.0% |
| !!! | AAATCCAAAACAATTTTGTT+TGG | + | chr4.4:34987130-34987149 | None:intergenic | 20.0% |
| !!! | AAATTTTACTACTTTTCAAG+AGG | - | chr4.4:34984721-34984740 | MS.gene057668:CDS | 20.0% |
| !!! | ATATTTTCTCATTAAAAGTC+TGG | - | chr4.4:34988506-34988525 | MS.gene057668:CDS | 20.0% |
| !!! | GTGTTGTTTTTGATAAATTA+TGG | - | chr4.4:34984852-34984871 | MS.gene057668:CDS | 20.0% |
| !!! | TATATTAGTATCGATTAACA+TGG | - | chr4.4:34987511-34987530 | MS.gene057668:CDS | 20.0% |
| !!! | TATTTTTTATTTTAGTGGAG+TGG | - | chr4.4:34986375-34986394 | MS.gene057668:intron | 20.0% |
| !!! | TCATTTTTATATATGCTCAT+TGG | - | chr4.4:34985376-34985395 | MS.gene057668:intron | 20.0% |
| !!! | TCTTATTTGATAATGTTTTC+AGG | - | chr4.4:34989584-34989603 | MS.gene057668:CDS | 20.0% |
| !!! | TTGCTGCTTTTTTTTTTTTT+TGG | - | chr4.4:34987332-34987351 | MS.gene057668:intron | 20.0% |
| !!! | TTTAGTACTTTTATGTTATG+TGG | - | chr4.4:34987415-34987434 | MS.gene057668:intron | 20.0% |
| !!! | TTTGTGTTTTTTTTCTTTGT+TGG | - | chr4.4:34984830-34984849 | MS.gene057668:CDS | 20.0% |
| !!! | TTTTTATTTGCTATTTTTCC+AGG | - | chr4.4:34987949-34987968 | MS.gene057668:intron | 20.0% |
| ! | AAAAACAGAGAAAAACTAGT+AGG | + | chr4.4:34984944-34984963 | None:intergenic | 25.0% |
| ! | AAAACACACAATATTCTGAA+TGG | - | chr4.4:34989366-34989385 | MS.gene057668:intron | 25.0% |
| ! | AAACTATTGGGTTAAAACTT+GGG | - | chr4.4:34986470-34986489 | MS.gene057668:intron | 25.0% |
| ! | AACACAAATTTAATGGCAAA+AGG | + | chr4.4:34989138-34989157 | None:intergenic | 25.0% |
| ! | AAGACTATACTACATCTAAA+TGG | + | chr4.4:34989307-34989326 | None:intergenic | 25.0% |
| ! | AGTATAAACAAAGATGAATC+AGG | + | chr4.4:34988101-34988120 | None:intergenic | 25.0% |
| ! | ATAAATGATTCTTTATCTGC+CGG | + | chr4.4:34989861-34989880 | None:intergenic | 25.0% |
| ! | ATGAATATTCTCTATAGAAG+AGG | - | chr4.4:34987701-34987720 | MS.gene057668:intron | 25.0% |
| ! | ATTTACCTAGACTATTTGTA+CGG | - | chr4.4:34987104-34987123 | MS.gene057668:intron | 25.0% |
| ! | ATTTCACATTATTTCCTAAC+TGG | + | chr4.4:34987900-34987919 | None:intergenic | 25.0% |
| ! | ATTTCGTTTGTTCAACTTAA+TGG | - | chr4.4:34986257-34986276 | MS.gene057668:intron | 25.0% |
| ! | CTAACTGTATGTAATTATTC+TGG | - | chr4.4:34987041-34987060 | MS.gene057668:intron | 25.0% |
| ! | GCAAATTTCGTAGAAAAAAA+TGG | - | chr4.4:34984516-34984535 | MS.gene057668:CDS | 25.0% |
| ! | TAAAAGTTATGCAGCAAAAA+GGG | + | chr4.4:34989184-34989203 | None:intergenic | 25.0% |
| ! | TAAATCTACTGTAAGAAGTT+TGG | + | chr4.4:34987089-34987108 | None:intergenic | 25.0% |
| ! | TAATACCAAATTTCAGAGAA+AGG | + | chr4.4:34986089-34986108 | None:intergenic | 25.0% |
| ! | TGGATTATTTGTAGTAGATT+GGG | - | chr4.4:34987352-34987371 | MS.gene057668:intron | 25.0% |
| ! | TGTGAACCAAATAATATTAG+AGG | + | chr4.4:34987471-34987490 | None:intergenic | 25.0% |
| ! | TGTTTGCAATTGATTAAGAA+TGG | - | chr4.4:34989536-34989555 | MS.gene057668:intron | 25.0% |
| ! | TTAACTCTGTTCAATTCATA+AGG | + | chr4.4:34988643-34988662 | None:intergenic | 25.0% |
| ! | TTAATGTTATCTGCTGAAAA+GGG | - | chr4.4:34985314-34985333 | MS.gene057668:intron | 25.0% |
| ! | TTATCATATCTTCTGTAGAA+AGG | - | chr4.4:34985877-34985896 | MS.gene057668:intron | 25.0% |
| ! | TTCTTCAAATCATCAATAAC+AGG | + | chr4.4:34985079-34985098 | None:intergenic | 25.0% |
| ! | TTGGATTATTTGTAGTAGAT+TGG | - | chr4.4:34987351-34987370 | MS.gene057668:intron | 25.0% |
| ! | TTTAAAAATAAGAAGCCCAA+AGG | - | chr4.4:34988896-34988915 | MS.gene057668:intron | 25.0% |
| ! | TTTAATGTTATCTGCTGAAA+AGG | - | chr4.4:34985313-34985332 | MS.gene057668:intron | 25.0% |
| ! | TTTCGTTTGTTCAACTTAAT+GGG | - | chr4.4:34986258-34986277 | MS.gene057668:intron | 25.0% |
| !! | AATATAGTGTATTTTCCATC+TGG | - | chr4.4:34986508-34986527 | MS.gene057668:CDS | 25.0% |
| !! | AATATTGTGTGTTTTGCAAT+GGG | + | chr4.4:34989361-34989380 | None:intergenic | 25.0% |
| !! | AATTAGAGATTCTAAGAGTA+TGG | + | chr4.4:34990066-34990085 | None:intergenic | 25.0% |
| !! | AGAATCATTTATGGATGTTT+TGG | - | chr4.4:34989869-34989888 | MS.gene057668:CDS | 25.0% |
| !! | GCTTAAGTTAAATGTTTTGT+TGG | - | chr4.4:34985775-34985794 | MS.gene057668:intron | 25.0% |
| !! | TCATAACTAAAACGTAGTTT+TGG | - | chr4.4:34987798-34987817 | MS.gene057668:intron | 25.0% |
| !!! | AAGTTTTAACCCAATAGTTT+GGG | + | chr4.4:34986470-34986489 | None:intergenic | 25.0% |
| !!! | AATTATGGACTTTTAGAAGA+AGG | - | chr4.4:34984867-34984886 | MS.gene057668:CDS | 25.0% |
| !!! | ATAATGTTTTCAGGTTGATT+TGG | - | chr4.4:34989593-34989612 | MS.gene057668:CDS | 25.0% |
| !!! | ATACTTAACTTCTGCTTTTT+CGG | + | chr4.4:34988191-34988210 | None:intergenic | 25.0% |
| !!! | ATTAAGTTGAACAAACGAAA+TGG | + | chr4.4:34986258-34986277 | None:intergenic | 25.0% |
| !!! | GTTATTAGTATCGATTAACA+TGG | - | chr4.4:34987573-34987592 | MS.gene057668:CDS | 25.0% |
| !!! | TAATGTTTTCAGGTTGATTT+GGG | - | chr4.4:34989594-34989613 | MS.gene057668:CDS | 25.0% |
| !!! | TACTAGTTTTTCTCTGTTTT+TGG | - | chr4.4:34984943-34984962 | MS.gene057668:CDS | 25.0% |
| !!! | TATACGCAATTTATTTTCCT+TGG | - | chr4.4:34986005-34986024 | MS.gene057668:intron | 25.0% |
| !!! | TTTGGGCTTCTTATTTTTAA+AGG | + | chr4.4:34988897-34988916 | None:intergenic | 25.0% |
| AAAAAAAAAAAAGGGCAACC+CGG | + | chr4.4:34985578-34985597 | None:intergenic | 30.0% | |
| AACATATAAAGCATATGTGG+AGG | - | chr4.4:34989716-34989735 | MS.gene057668:CDS | 30.0% | |
| AACTATTGGGTTAAAACTTG+GGG | - | chr4.4:34986471-34986490 | MS.gene057668:intron | 30.0% | |
| AATGATGAACTTGAAGTTGA+AGG | - | chr4.4:34984656-34984675 | MS.gene057668:intron | 30.0% | |
| AATGGCAAAAGGATAAAAGA+AGG | + | chr4.4:34989127-34989146 | None:intergenic | 30.0% | |
| AATTCGCTAATTCTGCTAAA+AGG | - | chr4.4:34984591-34984610 | MS.gene057668:intron | 30.0% | |
| ACAGAGGAACACAAATTTAA+TGG | + | chr4.4:34989145-34989164 | None:intergenic | 30.0% | |
| AGCTTTCAATGTGTAATGAA+GGG | - | chr4.4:34988960-34988979 | MS.gene057668:intron | 30.0% | |
| ATTAGAAAGTAACTGCACTT+TGG | - | chr4.4:34986868-34986887 | MS.gene057668:intron | 30.0% | |
| ATTCGCTAATTCTGCTAAAA+GGG | - | chr4.4:34984592-34984611 | MS.gene057668:intron | 30.0% | |
| ATTCTTGTGAATACTGAAAC+TGG | + | chr4.4:34987876-34987895 | None:intergenic | 30.0% | |
| ATTTGTGTTCCTCTGTTATA+AGG | - | chr4.4:34989149-34989168 | MS.gene057668:intron | 30.0% | |
| CAAACTATTGGGTTAAAACT+TGG | - | chr4.4:34986469-34986488 | MS.gene057668:intron | 30.0% | |
| CATACTGTAAATCATTGACA+CGG | + | chr4.4:34985192-34985211 | None:intergenic | 30.0% | |
| CCAGAAAATATTCTACCTTT+GGG | + | chr4.4:34988914-34988933 | None:intergenic | 30.0% | |
| CTAAAAGTTATGCAGCAAAA+AGG | + | chr4.4:34989185-34989204 | None:intergenic | 30.0% | |
| CTAATTTAAGCTGTCTAACA+TGG | - | chr4.4:34990080-34990099 | MS.gene057668:CDS | 30.0% | |
| GAAGTTAAGTATCCAAGTTA+AGG | - | chr4.4:34988199-34988218 | MS.gene057668:intron | 30.0% | |
| GACTTGAGAATTGGATTATT+GGG | - | chr4.4:34985044-34985063 | MS.gene057668:CDS | 30.0% | |
| GATAAGCTTAGAACTCAATT+GGG | - | chr4.4:34984755-34984774 | MS.gene057668:CDS | 30.0% | |
| GCTAACATATAAAGCATATG+TGG | - | chr4.4:34989713-34989732 | MS.gene057668:CDS | 30.0% | |
| GGCAGATAAAGAATCATTTA+TGG | - | chr4.4:34989860-34989879 | MS.gene057668:CDS | 30.0% | |
| TAAATGATTCTTTATCTGCC+GGG | + | chr4.4:34989860-34989879 | None:intergenic | 30.0% | |
| TAAGCAAAGATGTGCTTATT+AGG | - | chr4.4:34988579-34988598 | MS.gene057668:CDS | 30.0% | |
| TAATTACATACAGTTAGTGC+AGG | + | chr4.4:34987038-34987057 | None:intergenic | 30.0% | |
| TATTCACAAGAATACCAGTT+AGG | - | chr4.4:34987883-34987902 | MS.gene057668:intron | 30.0% | |
| TGACTCATTATTATTGCATG+TGG | - | chr4.4:34988545-34988564 | MS.gene057668:CDS | 30.0% | |
| TGGCATGAAAATAGTTAACA+TGG | + | chr4.4:34989287-34989306 | None:intergenic | 30.0% | |
| TGTGAATACAAGGGAAAATA+TGG | + | chr4.4:34988128-34988147 | None:intergenic | 30.0% | |
| TTAATTGCTGTCAATATCAG+TGG | - | chr4.4:34990221-34990240 | MS.gene057668:CDS | 30.0% | |
| TTTACCAAAGGTTTGGATAA+TGG | - | chr4.4:34989945-34989964 | MS.gene057668:CDS | 30.0% | |
| TTTCTGGATTTATATTCCTG+AGG | - | chr4.4:34985937-34985956 | MS.gene057668:intron | 30.0% | |
| ! | AGAATTAGCGAATTTTGGAT+GGG | + | chr4.4:34984585-34984604 | None:intergenic | 30.0% |
| ! | ATATTGTGTGTTTTGCAATG+GGG | + | chr4.4:34989360-34989379 | None:intergenic | 30.0% |
| ! | GAAAGTTTAACTTCAATGCA+GGG | - | chr4.4:34990156-34990175 | MS.gene057668:CDS | 30.0% |
| ! | GAATATTGTGTGTTTTGCAA+TGG | + | chr4.4:34989362-34989381 | None:intergenic | 30.0% |
| ! | GTCTGAAACATCTATATCAA+TGG | + | chr4.4:34989772-34989791 | None:intergenic | 30.0% |
| ! | GTTATGGATTATCTCTAGAT+TGG | - | chr4.4:34986992-34987011 | MS.gene057668:intron | 30.0% |
| ! | GTTTTATCTAGATACCAGAT+AGG | - | chr4.4:34986027-34986046 | MS.gene057668:intron | 30.0% |
| ! | TTAGCAGAATTAGCGAATTT+TGG | + | chr4.4:34984590-34984609 | None:intergenic | 30.0% |
| ! | TTCTTCTTTTGTGCATCATT+GGG | - | chr4.4:34986663-34986682 | MS.gene057668:intron | 30.0% |
| ! | TTTCTTCTTTTGTGCATCAT+TGG | - | chr4.4:34986662-34986681 | MS.gene057668:intron | 30.0% |
| !! | ACAGAATTGTTGCTTTACAA+GGG | - | chr4.4:34989643-34989662 | MS.gene057668:CDS | 30.0% |
| !! | ATGAAGTCATTTTCAAACTG+AGG | - | chr4.4:34985349-34985368 | MS.gene057668:intron | 30.0% |
| !! | CAAGTTTTAACCCAATAGTT+TGG | + | chr4.4:34986471-34986490 | None:intergenic | 30.0% |
| !! | GTGCAATACCAAAAGTATTT+GGG | - | chr4.4:34988276-34988295 | MS.gene057668:intron | 30.0% |
| !! | TGTGCAATACCAAAAGTATT+TGG | - | chr4.4:34988275-34988294 | MS.gene057668:intron | 30.0% |
| !! | TTAAGCCTTTCTCTGAAATT+TGG | - | chr4.4:34986081-34986100 | MS.gene057668:intron | 30.0% |
| !!! | AAAGGATCAGTTTTGGATTT+TGG | - | chr4.4:34985895-34985914 | MS.gene057668:intron | 30.0% |
| !!! | AATTGTTTTGGATTTCGAGA+AGG | - | chr4.4:34987135-34987154 | MS.gene057668:intron | 30.0% |
| !!! | ATTGTTTTGGATTTCGAGAA+GGG | - | chr4.4:34987136-34987155 | MS.gene057668:intron | 30.0% |
| !!! | CGAAAGCTTCCTTATTTTTT+TGG | - | chr4.4:34987274-34987293 | MS.gene057668:intron | 30.0% |
| !!! | TACCAAAAGTATTTGGGTTT+TGG | - | chr4.4:34988282-34988301 | MS.gene057668:intron | 30.0% |
| !!! | TACTTAACTTCTGCTTTTTC+GGG | + | chr4.4:34988190-34988209 | None:intergenic | 30.0% |
| !!! | TTTTTATTTTAGTGGAGTGG+TGG | - | chr4.4:34986378-34986397 | MS.gene057668:intron | 30.0% |
| !!! | TTTTTCTCTGTTTTTGGAGA+AGG | - | chr4.4:34984949-34984968 | MS.gene057668:CDS | 30.0% |
| AAACAACTCTCCCAAACTAT+TGG | - | chr4.4:34986457-34986476 | MS.gene057668:intron | 35.0% | |
| AAAGCAACAATTCTGTCTGT+TGG | + | chr4.4:34989639-34989658 | None:intergenic | 35.0% | |
| AAATCTGGAGAAATGCAAGA+AGG | - | chr4.4:34987205-34987224 | MS.gene057668:intron | 35.0% | |
| AACAACACCTGATTCCAAAT+TGG | + | chr4.4:34988069-34988088 | None:intergenic | 35.0% | |
| AACAACTCTCCCAAACTATT+GGG | - | chr4.4:34986458-34986477 | MS.gene057668:intron | 35.0% | |
| AACAGTCAAACTACTGTCAT+TGG | - | chr4.4:34988030-34988049 | MS.gene057668:intron | 35.0% | |
| AACATCACTACTTTGATGCA+AGG | + | chr4.4:34989460-34989479 | None:intergenic | 35.0% | |
| AAGTTGTGGAAGGTTTATAG+AGG | - | chr4.4:34985019-34985038 | MS.gene057668:CDS | 35.0% | |
| AATCACAGCAAGCCAAAATA+AGG | + | chr4.4:34990186-34990205 | None:intergenic | 35.0% | |
| ACATCACTACTTTGATGCAA+GGG | + | chr4.4:34989459-34989478 | None:intergenic | 35.0% | |
| ACTAGTAAGTAGAGATCACA+AGG | + | chr4.4:34988320-34988339 | None:intergenic | 35.0% | |
| ACTCATCAAATTCTCATCCA+GGG | - | chr4.4:34985613-34985632 | MS.gene057668:intron | 35.0% | |
| AGAAATGCAAGAAGGAAACA+TGG | - | chr4.4:34987213-34987232 | MS.gene057668:intron | 35.0% | |
| AGAAGCCTGATTATGTTGAA+AGG | - | chr4.4:34985095-34985114 | MS.gene057668:CDS | 35.0% | |
| AGATTAAGCAGTTCTCGTTA+GGG | - | chr4.4:34985122-34985141 | MS.gene057668:intron | 35.0% | |
| ATGATGAGAAGACAATGACA+TGG | - | chr4.4:34985667-34985686 | MS.gene057668:intron | 35.0% | |
| ATTAATACCAACAGCTCCTT+GGG | - | chr4.4:34986176-34986195 | MS.gene057668:intron | 35.0% | |
| ATTCCAATTGTTGTACCTGT+TGG | - | chr4.4:34986108-34986127 | MS.gene057668:intron | 35.0% | |
| ATTGTTAGCGAAGAATTCCA+AGG | - | chr4.4:34989900-34989919 | MS.gene057668:CDS | 35.0% | |
| ATTTATATTCCTGAGGTCTG+AGG | - | chr4.4:34985944-34985963 | MS.gene057668:intron | 35.0% | |
| CAAATAAGAAACATACACCC+AGG | + | chr4.4:34989573-34989592 | None:intergenic | 35.0% | |
| CAGCTTTCAATGTGTAATGA+AGG | - | chr4.4:34988959-34988978 | MS.gene057668:intron | 35.0% | |
| CATAACGATGAAGAGAAACA+AGG | + | chr4.4:34986978-34986997 | None:intergenic | 35.0% | |
| CTGGTATCTAGATAAAACCA+AGG | + | chr4.4:34986025-34986044 | None:intergenic | 35.0% | |
| GAAGCCTGATTATGTTGAAA+GGG | - | chr4.4:34985096-34985115 | MS.gene057668:CDS | 35.0% | |
| GACAGTTCAAACTTGATCTT+TGG | + | chr4.4:34986234-34986253 | None:intergenic | 35.0% | |
| GCCAGAAAATATTCTACCTT+TGG | + | chr4.4:34988915-34988934 | None:intergenic | 35.0% | |
| GCTAGAACATGTGAATACAA+GGG | + | chr4.4:34988137-34988156 | None:intergenic | 35.0% | |
| GCTTTCAATGTGTAATGAAG+GGG | - | chr4.4:34988961-34988980 | MS.gene057668:intron | 35.0% | |
| GGAAAAAGTTGGATGTTCAT+GGG | - | chr4.4:34988993-34989012 | MS.gene057668:intron | 35.0% | |
| GGACTTGAGAATTGGATTAT+TGG | - | chr4.4:34985043-34985062 | MS.gene057668:CDS | 35.0% | |
| GGATAAGCTTAGAACTCAAT+TGG | - | chr4.4:34984754-34984773 | MS.gene057668:CDS | 35.0% | |
| GGATTTGCAGATTTGACTAT+TGG | - | chr4.4:34988230-34988249 | MS.gene057668:intron | 35.0% | |
| GTCAAAAACCTACAAGAGAA+AGG | + | chr4.4:34987067-34987086 | None:intergenic | 35.0% | |
| GTTATGTGGACAATGTTATG+TGG | - | chr4.4:34987429-34987448 | MS.gene057668:intron | 35.0% | |
| TAAAAATCCCAGCACGTTAA+AGG | + | chr4.4:34989260-34989279 | None:intergenic | 35.0% | |
| TACATTAACTAAAACAGCCC+TGG | + | chr4.4:34985633-34985652 | None:intergenic | 35.0% | |
| TACTCATCAAATTCTCATCC+AGG | - | chr4.4:34985612-34985631 | MS.gene057668:intron | 35.0% | |
| TCAACATTCCTAACAGACAA+AGG | + | chr4.4:34985154-34985173 | None:intergenic | 35.0% | |
| TCAACCCTTTCAACATAATC+AGG | + | chr4.4:34985103-34985122 | None:intergenic | 35.0% | |
| TGCTAGAACATGTGAATACA+AGG | + | chr4.4:34988138-34988157 | None:intergenic | 35.0% | |
| TGTCAACTACTCTCTTTGAT+GGG | + | chr4.4:34989222-34989241 | None:intergenic | 35.0% | |
| TTCGCTAATTCTGCTAAAAG+GGG | - | chr4.4:34984593-34984612 | MS.gene057668:intron | 35.0% | |
| TTGTCAACTACTCTCTTTGA+TGG | + | chr4.4:34989223-34989242 | None:intergenic | 35.0% | |
| TTGTTAGCGAAGAATTCCAA+GGG | - | chr4.4:34989901-34989920 | MS.gene057668:CDS | 35.0% | |
| ! | AAAAAAGTGGAGTACCAAGA+GGG | + | chr4.4:34985698-34985717 | None:intergenic | 35.0% |
| ! | AATGGGTGAATATGGTGTTA+GGG | - | chr4.4:34984996-34985015 | MS.gene057668:CDS | 35.0% |
| ! | ACGGCCAAACAAAATTGTTT+TGG | - | chr4.4:34987123-34987142 | MS.gene057668:intron | 35.0% |
| ! | CACCAAAACCCAAATACTTT+TGG | + | chr4.4:34988287-34988306 | None:intergenic | 35.0% |
| ! | CAGAATTAGCGAATTTTGGA+TGG | + | chr4.4:34984586-34984605 | None:intergenic | 35.0% |
| ! | CCCAAAGGTAGAATATTTTC+TGG | - | chr4.4:34988911-34988930 | MS.gene057668:intron | 35.0% |
| ! | CGAAAGTTTAACTTCAATGC+AGG | - | chr4.4:34990155-34990174 | MS.gene057668:CDS | 35.0% |
| ! | CTTGTTTCTCTTCATCGTTA+TGG | - | chr4.4:34986976-34986995 | MS.gene057668:intron | 35.0% |
| ! | GATAATTCTGAAGGTTCTTC+TGG | - | chr4.4:34990035-34990054 | MS.gene057668:CDS | 35.0% |
| ! | GTTCTAAGCTTATCCACAAT+TGG | + | chr4.4:34984749-34984768 | None:intergenic | 35.0% |
| ! | TCATCTAAGATCACCAATTC+TGG | + | chr4.4:34988681-34988700 | None:intergenic | 35.0% |
| ! | TCTGTAGAAAGGATCAGTTT+TGG | - | chr4.4:34985888-34985907 | MS.gene057668:intron | 35.0% |
| ! | TGGATAATGGCTCAAATACA+GGG | - | chr4.4:34989958-34989977 | MS.gene057668:CDS | 35.0% |
| ! | TTGGATAATGGCTCAAATAC+AGG | - | chr4.4:34989957-34989976 | MS.gene057668:CDS | 35.0% |
| !! | AGAATTGTTGCTTTACAAGG+GGG | - | chr4.4:34989645-34989664 | MS.gene057668:CDS | 35.0% |
| !! | CAGAATTGTTGCTTTACAAG+GGG | - | chr4.4:34989644-34989663 | MS.gene057668:CDS | 35.0% |
| !! | GACAGAATTGTTGCTTTACA+AGG | - | chr4.4:34989642-34989661 | MS.gene057668:CDS | 35.0% |
| !! | GTTCGAGATTTTGACATTGA+TGG | - | chr4.4:34986132-34986151 | MS.gene057668:intron | 35.0% |
| !! | TATGGACTTTTAGAAGAAGG+AGG | - | chr4.4:34984870-34984889 | MS.gene057668:CDS | 35.0% |
| !! | TGACATTGATGGTGAACTTT+GGG | - | chr4.4:34986143-34986162 | MS.gene057668:intron | 35.0% |
| !! | TTGACATTGATGGTGAACTT+TGG | - | chr4.4:34986142-34986161 | MS.gene057668:intron | 35.0% |
| !! | TTTTCAAGAGGATCCAATTG+TGG | - | chr4.4:34984733-34984752 | MS.gene057668:CDS | 35.0% |
| !!! | AGAATGGAGCTATTTTTTCC+TGG | - | chr4.4:34989552-34989571 | MS.gene057668:CDS | 35.0% |
| !!! | GAATGGAGCTATTTTTTCCT+GGG | - | chr4.4:34989553-34989572 | MS.gene057668:CDS | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.4:34985487-34985506 | None:intergenic | 35.0% |
| AAAATCTCCTGTTGCCAATG+CGG | - | chr4.4:34989992-34990011 | MS.gene057668:CDS | 40.0% | |
| AAAGTTGGATGTTCATGGGA+AGG | - | chr4.4:34988997-34989016 | MS.gene057668:intron | 40.0% | |
| AACAGGGTTTACCAAAGGTT+TGG | - | chr4.4:34989938-34989957 | MS.gene057668:CDS | 40.0% | |
| AAGCACTCAGATCGTAAAAG+AGG | + | chr4.4:34986310-34986329 | None:intergenic | 40.0% | |
| AAGTTGGATGTTCATGGGAA+GGG | - | chr4.4:34988998-34989017 | MS.gene057668:intron | 40.0% | |
| ACACCAACAGGTACAACAAT+TGG | + | chr4.4:34986114-34986133 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.4:34985480-34985499 | MS.gene057668:intron | 40.0% | |
| ACTACTTTGATGCAAGGGAT+TGG | + | chr4.4:34989454-34989473 | None:intergenic | 40.0% | |
| ACTGCGTACAATACACCAAA+TGG | - | chr4.4:34985508-34985527 | MS.gene057668:intron | 40.0% | |
| AGAGGCAGAAGAAAGGAAAA+AGG | - | chr4.4:34987719-34987738 | MS.gene057668:intron | 40.0% | |
| AGCAAATGTCACTGATACGA+TGG | - | chr4.4:34989815-34989834 | MS.gene057668:CDS | 40.0% | |
| AGCTCAACTCCTTATAACAG+AGG | + | chr4.4:34989161-34989180 | None:intergenic | 40.0% | |
| AGGCAGAAGAAAGGAAAAAG+GGG | - | chr4.4:34987721-34987740 | MS.gene057668:intron | 40.0% | |
| AGGGATTCACAGGTTCAATT+GGG | - | chr4.4:34984695-34984714 | MS.gene057668:CDS | 40.0% | |
| ATGACATGGTATTTCCCTCT+TGG | - | chr4.4:34985681-34985700 | MS.gene057668:intron | 40.0% | |
| ATTCCAAATTGGCATTCCAG+GGG | + | chr4.4:34988058-34988077 | None:intergenic | 40.0% | |
| CAAACAAACCAGCAACGTTT+CGG | + | chr4.4:34984814-34984833 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.4:34985481-34985500 | MS.gene057668:intron | 40.0% | |
| CCAAGGCTAAGAATGACATA+TGG | + | chr4.4:34987985-34988004 | None:intergenic | 40.0% | |
| CCATATGTCATTCTTAGCCT+TGG | - | chr4.4:34987982-34988001 | MS.gene057668:intron | 40.0% | |
| CCTTCAGAATTATCAGCACT+AGG | + | chr4.4:34990029-34990048 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.4:34985512-34985531 | MS.gene057668:intron | 40.0% | |
| CTACTTTGATGCAAGGGATT+GGG | + | chr4.4:34989453-34989472 | None:intergenic | 40.0% | |
| CTATAGAAGAGGCAGAAGAA+AGG | - | chr4.4:34987712-34987731 | MS.gene057668:intron | 40.0% | |
| CTGTTAGGAATGTTGAACGT+AGG | - | chr4.4:34985158-34985177 | MS.gene057668:intron | 40.0% | |
| CTTAGTGTCTTGTCTGTCTA+TGG | - | chr4.4:34988415-34988434 | MS.gene057668:intron | 40.0% | |
| GAAAAACTAGTAGGCACTTG+CGG | + | chr4.4:34984935-34984954 | None:intergenic | 40.0% | |
| GAAACTTACATCGAGAGAAC+TGG | + | chr4.4:34986703-34986722 | None:intergenic | 40.0% | |
| GAAGGAAACATGGATTCTGT+TGG | - | chr4.4:34987223-34987242 | MS.gene057668:intron | 40.0% | |
| GAATGGGTGAATATGGTGTT+AGG | - | chr4.4:34984995-34985014 | MS.gene057668:CDS | 40.0% | |
| GAGATTAAGCAGTTCTCGTT+AGG | - | chr4.4:34985121-34985140 | MS.gene057668:intron | 40.0% | |
| GAGGAACAAAGTTAGTAGTG+AGG | - | chr4.4:34984889-34984908 | MS.gene057668:CDS | 40.0% | |
| GAGGCAGAAGAAAGGAAAAA+GGG | - | chr4.4:34987720-34987739 | MS.gene057668:intron | 40.0% | |
| GATGAACTTGAAGTTGAAGG+CGG | - | chr4.4:34984659-34984678 | MS.gene057668:intron | 40.0% | |
| GATTAACATGGTAGACTCCA+AGG | - | chr4.4:34987523-34987542 | MS.gene057668:CDS | 40.0% | |
| GATTAAGCAGTTCTCGTTAG+GGG | - | chr4.4:34985123-34985142 | MS.gene057668:intron | 40.0% | |
| GATTAATACCAACAGCTCCT+TGG | - | chr4.4:34986175-34986194 | MS.gene057668:intron | 40.0% | |
| GATTCCAAATTGGCATTCCA+GGG | + | chr4.4:34988059-34988078 | None:intergenic | 40.0% | |
| GATTTAACACCATCAACGAC+AGG | + | chr4.4:34987190-34987209 | None:intergenic | 40.0% | |
| GCAAATGTCACTGATACGAT+GGG | - | chr4.4:34989816-34989835 | MS.gene057668:CDS | 40.0% | |
| GCAATTAGCATGCAGCATTA+TGG | + | chr4.4:34988442-34988461 | None:intergenic | 40.0% | |
| GCACATCTTTGCTTAAGACA+AGG | + | chr4.4:34988574-34988593 | None:intergenic | 40.0% | |
| GCAGATTTGACTATTGGTAC+TGG | - | chr4.4:34988236-34988255 | MS.gene057668:intron | 40.0% | |
| GGGAAAAAGTTGGATGTTCA+TGG | - | chr4.4:34988992-34989011 | MS.gene057668:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr4.4:34985436-34985455 | MS.gene057668:intron | 40.0% | |
| TAAAGCATATGTGGAGGATG+AGG | - | chr4.4:34989722-34989741 | MS.gene057668:CDS | 40.0% | |
| TAAGATCACCAATTCTGGTG+AGG | + | chr4.4:34988676-34988695 | None:intergenic | 40.0% | |
| TCAAAATCTCGAACACCAAC+AGG | + | chr4.4:34986126-34986145 | None:intergenic | 40.0% | |
| TCAGAATTATCAGCACTAGG+AGG | + | chr4.4:34990026-34990045 | None:intergenic | 40.0% | |
| TGAGCCATTATCCAAACCTT+TGG | + | chr4.4:34989952-34989971 | None:intergenic | 40.0% | |
| TGATTCCAAATTGGCATTCC+AGG | + | chr4.4:34988060-34988079 | None:intergenic | 40.0% | |
| TGCTCATTGGAATAGTACTG+AGG | - | chr4.4:34985389-34985408 | MS.gene057668:intron | 40.0% | |
| TGGTAACACTCTTGATCACT+TGG | - | chr4.4:34986407-34986426 | MS.gene057668:intron | 40.0% | |
| TTAATAGGAGGCGATGGAAT+CGG | + | chr4.4:34984791-34984810 | None:intergenic | 40.0% | |
| TTCACATGTTCTAGCACTAC+AGG | - | chr4.4:34988142-34988161 | MS.gene057668:intron | 40.0% | |
| TTCTTTCAGCGACTAAGCAA+AGG | + | chr4.4:34988868-34988887 | None:intergenic | 40.0% | |
| TTGTGGAAGGTTTATAGAGG+TGG | - | chr4.4:34985022-34985041 | MS.gene057668:CDS | 40.0% | |
| TTTCAGATGCTACTATCCCT+TGG | + | chr4.4:34989920-34989939 | None:intergenic | 40.0% | |
| TTTGGCCGTACAAATAGTCT+AGG | + | chr4.4:34987112-34987131 | None:intergenic | 40.0% | |
| ! | AATACCACACTTTTCGACCA+CGG | - | chr4.4:34989331-34989350 | MS.gene057668:intron | 40.0% |
| ! | AATTCTGAAGGTTCTTCTGG+AGG | - | chr4.4:34990038-34990057 | MS.gene057668:CDS | 40.0% |
| ! | ACTGTTCTTTTTGCTGCGTA+TGG | + | chr4.4:34988016-34988035 | None:intergenic | 40.0% |
| ! | AGTAGTGAGGATAGTTTTCG+CGG | - | chr4.4:34984902-34984921 | MS.gene057668:CDS | 40.0% |
| ! | ATAGAGGTGGACTTGAGAAT+TGG | - | chr4.4:34985035-34985054 | MS.gene057668:CDS | 40.0% |
| ! | ATATGGTGTTAGGGAAGTTG+TGG | - | chr4.4:34985005-34985024 | MS.gene057668:CDS | 40.0% |
| ! | CAAAAAAGTGGAGTACCAAG+AGG | + | chr4.4:34985699-34985718 | None:intergenic | 40.0% |
| ! | CTCATTGGAATAGTACTGAG+GGG | - | chr4.4:34985391-34985410 | MS.gene057668:intron | 40.0% |
| ! | CTGAGGCTATTGTGTGTTTT+AGG | - | chr4.4:34985961-34985980 | MS.gene057668:intron | 40.0% |
| ! | GATTATCTCTAGATTGGCTG+TGG | - | chr4.4:34986998-34987017 | MS.gene057668:intron | 40.0% |
| ! | GCTCATTGGAATAGTACTGA+GGG | - | chr4.4:34985390-34985409 | MS.gene057668:intron | 40.0% |
| ! | GGATAGTAGCATCTGAAACA+GGG | - | chr4.4:34989922-34989941 | MS.gene057668:CDS | 40.0% |
| ! | GTTTAACTTCAATGCAGGGT+CGG | - | chr4.4:34990160-34990179 | MS.gene057668:CDS | 40.0% |
| ! | TATTCTGGCCTTTCTCTTGT+AGG | - | chr4.4:34987056-34987075 | MS.gene057668:intron | 40.0% |
| ! | TCTAGATTGGCTGTGGAAAT+TGG | - | chr4.4:34987005-34987024 | MS.gene057668:intron | 40.0% |
| ! | TCTGAAACAGGGTTTACCAA+AGG | - | chr4.4:34989933-34989952 | MS.gene057668:CDS | 40.0% |
| ! | TGGAATGCCAATTTGGAATC+AGG | - | chr4.4:34988059-34988078 | MS.gene057668:intron | 40.0% |
| ! | TTTGACTATTGGTACTGGAG+AGG | - | chr4.4:34988241-34988260 | MS.gene057668:intron | 40.0% |
| !! | AATATTTTCTGGCGTGTGCT+GGG | - | chr4.4:34988922-34988941 | MS.gene057668:intron | 40.0% |
| !! | AGAGAGTTTTGTGGTGATGT+TGG | - | chr4.4:34989052-34989071 | MS.gene057668:intron | 40.0% |
| !! | AGTTTTGTGGTGATGTTGGT+GGG | - | chr4.4:34989056-34989075 | MS.gene057668:intron | 40.0% |
| !! | CATCCAACTTTTTCCCTACT+AGG | + | chr4.4:34988988-34989007 | None:intergenic | 40.0% |
| !! | CCTAGTGCTGATAATTCTGA+AGG | - | chr4.4:34990026-34990045 | MS.gene057668:CDS | 40.0% |
| !! | CTGAATGCTTTGGAGTGTAT+CGG | - | chr4.4:34988792-34988811 | MS.gene057668:intron | 40.0% |
| !! | GTATCGATTAACATGGTCCA+AGG | - | chr4.4:34987580-34987599 | MS.gene057668:CDS | 40.0% |
| !! | GTCGTTGATGGTGTTAAATC+TGG | - | chr4.4:34987190-34987209 | MS.gene057668:intron | 40.0% |
| !! | TGAATGCTTTGGAGTGTATC+GGG | - | chr4.4:34988793-34988812 | MS.gene057668:intron | 40.0% |
| !! | TTTTGGAGAAGGATTTGCAG+AGG | - | chr4.4:34984960-34984979 | MS.gene057668:CDS | 40.0% |
| !!! | CTTGGTACTCCACTTTTTTG+TGG | - | chr4.4:34985699-34985718 | MS.gene057668:intron | 40.0% |
| !!! | GGTTGGGGTTTTTTACGAAA+GGG | - | chr4.4:34989666-34989685 | MS.gene057668:CDS | 40.0% |
| !!! | TAACTTCTGCTTTTTCGGGT+TGG | + | chr4.4:34988186-34988205 | None:intergenic | 40.0% |
| !!! | TTATTTTAGTGGAGTGGTGG+TGG | - | chr4.4:34986381-34986400 | MS.gene057668:intron | 40.0% |
| AAATCCCAGCACGTTAAAGG+AGG | + | chr4.4:34989257-34989276 | None:intergenic | 45.0% | |
| ACATATGGATCTGTCTTGCC+TGG | + | chr4.4:34987970-34987989 | None:intergenic | 45.0% | |
| ACGTGAATTGAGGGATTCAC+AGG | - | chr4.4:34984685-34984704 | MS.gene057668:CDS | 45.0% | |
| AGAGGAAAGAGTCGGTTGAA+TGG | - | chr4.4:34984978-34984997 | MS.gene057668:CDS | 45.0% | |
| AGTAAGAGATTCTGCGTACC+CGG | - | chr4.4:34989839-34989858 | MS.gene057668:CDS | 45.0% | |
| ATAGGCCTTAGGTATACTGG+AGG | - | chr4.4:34986045-34986064 | MS.gene057668:intron | 45.0% | |
| ATCCAAGTTAAGGACGCTCT+GGG | - | chr4.4:34988209-34988228 | MS.gene057668:intron | 45.0% | |
| CAATTCTGGTGAGGCTCATT+CGG | + | chr4.4:34988667-34988686 | None:intergenic | 45.0% | |
| CAGATAGGCCTTAGGTATAC+TGG | - | chr4.4:34986042-34986061 | MS.gene057668:intron | 45.0% | |
| CAGTATACCTAAGGCCTATC+TGG | + | chr4.4:34986044-34986063 | None:intergenic | 45.0% | |
| CATCTGAAGACTGACTACCT+TGG | + | chr4.4:34987543-34987562 | None:intergenic | 45.0% | |
| CCAGCAACGTTTCGGTTAAT+AGG | + | chr4.4:34984806-34984825 | None:intergenic | 45.0% | |
| CCTATTAACCGAAACGTTGC+TGG | - | chr4.4:34984803-34984822 | MS.gene057668:CDS | 45.0% | |
| CTAGATACCAGATAGGCCTT+AGG | - | chr4.4:34986034-34986053 | MS.gene057668:intron | 45.0% | |
| CTTAGTCGCTGAAAGAACTG+TGG | - | chr4.4:34988871-34988890 | MS.gene057668:intron | 45.0% | |
| GAGGAAAGAGTCGGTTGAAT+GGG | - | chr4.4:34984979-34984998 | MS.gene057668:CDS | 45.0% | |
| GAGGGATTCACAGGTTCAAT+TGG | - | chr4.4:34984694-34984713 | MS.gene057668:CDS | 45.0% | |
| GCAACGTTTCGGTTAATAGG+AGG | + | chr4.4:34984803-34984822 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.4:34985511-34985530 | MS.gene057668:intron | 45.0% | |
| GGATTTGCAGAGGAAAGAGT+CGG | - | chr4.4:34984970-34984989 | MS.gene057668:CDS | 45.0% | |
| GGGATGAACCTTTGTCTGTT+AGG | - | chr4.4:34985143-34985162 | MS.gene057668:intron | 45.0% | |
| GGTCCTAGTAGGGAAAAAGT+TGG | - | chr4.4:34988982-34989001 | MS.gene057668:intron | 45.0% | |
| GTAATGAAGGGGTCCTAGTA+GGG | - | chr4.4:34988972-34988991 | MS.gene057668:intron | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr4.4:34985442-34985461 | MS.gene057668:intron | 45.0% | |
| GTCGGTTGAATGGGTGAATA+TGG | - | chr4.4:34984988-34985007 | MS.gene057668:CDS | 45.0% | |
| TAATAGGAGGCGATGGAATC+GGG | + | chr4.4:34984790-34984809 | None:intergenic | 45.0% | |
| TATCCAAGTTAAGGACGCTC+TGG | - | chr4.4:34988208-34988227 | MS.gene057668:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr4.4:34985443-34985462 | MS.gene057668:intron | 45.0% | |
| TGAGGAAGATGACAAGACTG+AGG | - | chr4.4:34989740-34989759 | MS.gene057668:CDS | 45.0% | |
| TGCCACTACACTGAATGCTT+TGG | - | chr4.4:34988782-34988801 | MS.gene057668:intron | 45.0% | |
| TGCGTATGGTTTGATCTCCA+AGG | + | chr4.4:34988002-34988021 | None:intergenic | 45.0% | |
| TGTAATGAAGGGGTCCTAGT+AGG | - | chr4.4:34988971-34988990 | MS.gene057668:intron | 45.0% | |
| TTCGAGAAGGGAAAAGCTGT+TGG | - | chr4.4:34987148-34987167 | MS.gene057668:intron | 45.0% | |
| TTGTCCTCCTTTAACGTGCT+GGG | - | chr4.4:34989250-34989269 | MS.gene057668:intron | 45.0% | |
| TTTCGGTTAATAGGAGGCGA+TGG | + | chr4.4:34984797-34984816 | None:intergenic | 45.0% | |
| ! | AGGAGGAATTGATTCCGCAT+TGG | + | chr4.4:34990009-34990028 | None:intergenic | 45.0% |
| ! | ATAGTACTGAGGGGTAACCT+TGG | - | chr4.4:34985400-34985419 | MS.gene057668:intron | 45.0% |
| ! | ATTGATTCCGCATTGGCAAC+AGG | + | chr4.4:34990002-34990021 | None:intergenic | 45.0% |
| ! | CTCCAAAGCATTCAGTGTAG+TGG | + | chr4.4:34988787-34988806 | None:intergenic | 45.0% |
| ! | CTTTTGTGCATCATTGGGCA+TGG | - | chr4.4:34986668-34986687 | MS.gene057668:CDS | 45.0% |
| ! | GGGATAGTAGCATCTGAAAC+AGG | - | chr4.4:34989921-34989940 | MS.gene057668:CDS | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.4:34985476-34985495 | None:intergenic | 45.0% |
| ! | TTTTACGAAAGGGCTCGTCT+GGG | - | chr4.4:34989676-34989695 | MS.gene057668:CDS | 45.0% |
| ! | TTTTTACGAAAGGGCTCGTC+TGG | - | chr4.4:34989675-34989694 | MS.gene057668:CDS | 45.0% |
| !! | GAATATTTTCTGGCGTGTGC+TGG | - | chr4.4:34988921-34988940 | MS.gene057668:intron | 45.0% |
| !! | GAGTTTTGTGGTGATGTTGG+TGG | - | chr4.4:34989055-34989074 | MS.gene057668:intron | 45.0% |
| !! | TCGGGTTGGAAACAAGCATA+TGG | + | chr4.4:34988172-34988191 | None:intergenic | 45.0% |
| !! | TGTTGCTTTACAAGGGGGTT+GGG | - | chr4.4:34989650-34989669 | MS.gene057668:CDS | 45.0% |
| !! | TTGTTGCTTTACAAGGGGGT+TGG | - | chr4.4:34989649-34989668 | MS.gene057668:CDS | 45.0% |
| !!! | GGGTTGGGGTTTTTTACGAA+AGG | - | chr4.4:34989665-34989684 | MS.gene057668:CDS | 45.0% |
| !!! | TTTTTTGTGGCACGAGGCAA+GGG | - | chr4.4:34985712-34985731 | MS.gene057668:intron | 45.0% |
| !!! | TTTTTTATTTTTTATTTTAG+TGG | - | chr4.4:34986370-34986389 | MS.gene057668:intron | 5.0% |
| AACGACAGGACCAACAGTGA+CGG | + | chr4.4:34987176-34987195 | None:intergenic | 50.0% | |
| AAGGCGGTGAACGTGAATTG+AGG | - | chr4.4:34984675-34984694 | MS.gene057668:intron | 50.0% | |
| ACACAATAGCCTCAGACCTC+AGG | + | chr4.4:34985956-34985975 | None:intergenic | 50.0% | |
| ACACAGCTAGTCAGCAACAG+AGG | + | chr4.4:34988617-34988636 | None:intergenic | 50.0% | |
| ACTGTTGGTCCTGTCGTTGA+TGG | - | chr4.4:34987178-34987197 | MS.gene057668:intron | 50.0% | |
| AGGCGGTGAACGTGAATTGA+GGG | - | chr4.4:34984676-34984695 | MS.gene057668:intron | 50.0% | |
| AGTCAGCAACAGAGGAGGAA+GGG | + | chr4.4:34988609-34988628 | None:intergenic | 50.0% | |
| ATACCAACAGCTCCTTGGGT+CGG | - | chr4.4:34986180-34986199 | MS.gene057668:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.4:34985420-34985439 | None:intergenic | 50.0% | |
| CAAGGGAATAGACTCGCTGT+TGG | - | chr4.4:34985729-34985748 | MS.gene057668:intron | 50.0% | |
| CGAATGAGCCTCACCAGAAT+TGG | - | chr4.4:34988665-34988684 | MS.gene057668:CDS | 50.0% | |
| CGTCTGGGGAGATATTGCTT+AGG | - | chr4.4:34989691-34989710 | MS.gene057668:CDS | 50.0% | |
| GAGCACCTCCAGTATACCTA+AGG | + | chr4.4:34986053-34986072 | None:intergenic | 50.0% | |
| GGAAGATGACAAGACTGAGG+AGG | - | chr4.4:34989743-34989762 | MS.gene057668:CDS | 50.0% | |
| GGTGTTAGGGAAGTTGTGGA+AGG | - | chr4.4:34985009-34985028 | MS.gene057668:CDS | 50.0% | |
| GGTTTCGGTAAGGGAAGAGA+GGG | - | chr4.4:34989027-34989046 | MS.gene057668:intron | 50.0% | |
| GTTGTCCTCCTTTAACGTGC+TGG | - | chr4.4:34989249-34989268 | MS.gene057668:intron | 50.0% | |
| GTTTCGGTAAGGGAAGAGAG+GGG | - | chr4.4:34989028-34989047 | MS.gene057668:intron | 50.0% | |
| TAGTCAGCAACAGAGGAGGA+AGG | + | chr4.4:34988610-34988629 | None:intergenic | 50.0% | |
| TCGAGCATCCACAAGAGTGA+CGG | + | chr4.4:34987257-34987276 | None:intergenic | 50.0% | |
| TGAACTCTCCGTCACTCTTG+TGG | - | chr4.4:34987246-34987265 | MS.gene057668:intron | 50.0% | |
| TGCCTCGTGCCACAAAAAAG+TGG | + | chr4.4:34985711-34985730 | None:intergenic | 50.0% | |
| TTTACGAAAGGGCTCGTCTG+GGG | - | chr4.4:34989677-34989696 | MS.gene057668:CDS | 50.0% | |
| ! | AGGATAGTTTTCGCGGTGTG+TGG | - | chr4.4:34984909-34984928 | MS.gene057668:CDS | 50.0% |
| ! | ATCCCAGAGCGTCCTTAACT+TGG | + | chr4.4:34988214-34988233 | None:intergenic | 50.0% |
| ! | ATGTTCATGGGAAGGGTGCA+GGG | - | chr4.4:34989005-34989024 | MS.gene057668:intron | 50.0% |
| ! | GACTCGCTGTTGGTGTGTTT+TGG | - | chr4.4:34985739-34985758 | MS.gene057668:intron | 50.0% |
| ! | GAGAGGGGAAGAGAGTTTTG+TGG | - | chr4.4:34989043-34989062 | MS.gene057668:intron | 50.0% |
| ! | GAGTGTATCGGGCATGGTTT+TGG | - | chr4.4:34988804-34988823 | MS.gene057668:intron | 50.0% |
| ! | GTTGCTTTACAAGGGGGTTG+GGG | - | chr4.4:34989651-34989670 | MS.gene057668:CDS | 50.0% |
| !! | TAGTGGAGTGGTGGTGGAAA+TGG | - | chr4.4:34986387-34986406 | MS.gene057668:intron | 50.0% |
| !! | TCGCTGTTGGTGTGTTTTGG+TGG | - | chr4.4:34985742-34985761 | MS.gene057668:intron | 50.0% |
| !!! | ATGCAGGGTCGGCCTTATTT+TGG | - | chr4.4:34990171-34990190 | MS.gene057668:CDS | 50.0% |
| !!! | CGCTGTTGGTGTGTTTTGGT+GGG | - | chr4.4:34985743-34985762 | MS.gene057668:intron | 50.0% |
| !!! | CTCCACTTTTTTGTGGCACG+AGG | - | chr4.4:34985706-34985725 | MS.gene057668:intron | 50.0% |
| !!! | CTTTTTTGTGGCACGAGGCA+AGG | - | chr4.4:34985711-34985730 | MS.gene057668:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.4:34985455-34985474 | MS.gene057668:intron | 55.0% | |
| ACGACAGGACCAACAGTGAC+GGG | + | chr4.4:34987175-34987194 | None:intergenic | 55.0% | |
| CAGCTAGTCAGCAACAGAGG+AGG | + | chr4.4:34988614-34988633 | None:intergenic | 55.0% | |
| GCAATCTCCACCCAAGCCAA+TGG | + | chr4.4:34989082-34989101 | None:intergenic | 55.0% | |
| GGGTTTCGGTAAGGGAAGAG+AGG | - | chr4.4:34989026-34989045 | MS.gene057668:intron | 55.0% | |
| TTGGGTCGGAGCTGCTTCAT+GGG | - | chr4.4:34986194-34986213 | MS.gene057668:intron | 55.0% | |
| ! | ACCACACTTTTCGACCACGG+TGG | - | chr4.4:34989334-34989353 | MS.gene057668:intron | 55.0% |
| ! | ATGTTGGTGGGCCATTGGCT+TGG | - | chr4.4:34989068-34989087 | MS.gene057668:intron | 55.0% |
| ! | GATGTTCATGGGAAGGGTGC+AGG | - | chr4.4:34989004-34989023 | MS.gene057668:intron | 55.0% |
| ! | TGGTGATGTTGGTGGGCCAT+TGG | - | chr4.4:34989063-34989082 | MS.gene057668:intron | 55.0% |
| ! | TGTTCATGGGAAGGGTGCAG+GGG | - | chr4.4:34989006-34989025 | MS.gene057668:intron | 55.0% |
| !! | GCTTTGGAGTGTATCGGGCA+TGG | - | chr4.4:34988798-34988817 | MS.gene057668:intron | 55.0% |
| !! | TGTTGGTGGGCCATTGGCTT+GGG | - | chr4.4:34989069-34989088 | MS.gene057668:intron | 55.0% |
| ACTACTGTCATTGGCGCCCC+TGG | - | chr4.4:34988039-34988058 | MS.gene057668:intron | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr4.4:34985552-34985571 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.4:34985409-34985428 | MS.gene057668:intron | 60.0% | |
| AGGGTGCAGGGGTTTCGGTA+AGG | - | chr4.4:34989017-34989036 | MS.gene057668:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr4.4:34985556-34985575 | MS.gene057668:intron | 60.0% | |
| CATGAAGCAGCTCCGACCCA+AGG | + | chr4.4:34986195-34986214 | None:intergenic | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr4.4:34985551-34985570 | None:intergenic | 60.0% | |
| CTGGCGTGTGCTGGGAACAA+TGG | - | chr4.4:34988930-34988949 | MS.gene057668:intron | 60.0% | |
| CTTGGGTCGGAGCTGCTTCA+TGG | - | chr4.4:34986193-34986212 | MS.gene057668:intron | 60.0% | |
| GCCACCGTGGTCGAAAAGTG+TGG | + | chr4.4:34989338-34989357 | None:intergenic | 60.0% | |
| GCGCCCCTGGAATGCCAATT+TGG | - | chr4.4:34988052-34988071 | MS.gene057668:intron | 60.0% | |
| GCTGTTGGTCCCGTCACTGT+TGG | - | chr4.4:34987163-34987182 | MS.gene057668:intron | 60.0% | |
| GGGTGCAGGGGTTTCGGTAA+GGG | - | chr4.4:34989018-34989037 | MS.gene057668:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4.4:34985524-34985543 | MS.gene057668:intron | 60.0% |
| ! | GTTTTGCAATGGGGCCACCG+TGG | + | chr4.4:34989351-34989370 | None:intergenic | 60.0% |
| ! | TGGGAAGGGTGCAGGGGTTT+CGG | - | chr4.4:34989012-34989031 | MS.gene057668:intron | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr4.4:34985539-34985558 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr4.4:34985526-34985545 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr4.4:34985539-34985558 | MS.gene057668:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr4.4:34985540-34985559 | None:intergenic | 65.0% | |
| GCTCCGACCCAAGGAGCTGT+TGG | + | chr4.4:34986186-34986205 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr4.4:34985557-34985576 | MS.gene057668:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr4.4:34985540-34985559 | MS.gene057668:intron | 65.0% | |
| !! | TGGTGGGCCATTGGCTTGGG+TGG | - | chr4.4:34989072-34989091 | MS.gene057668:intron | 65.0% |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr4.4:34985541-34985560 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr4.4:34985545-34985564 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr4.4:34985546-34985565 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 34984479 | 34990265 | 34984479 | ID=MS.gene057668 |
| chr4.4 | mRNA | 34984479 | 34990265 | 34984479 | ID=MS.gene057668.t1;Parent=MS.gene057668 |
| chr4.4 | exon | 34989538 | 34990265 | 34989538 | ID=MS.gene057668.t1.exon1;Parent=MS.gene057668.t1 |
| chr4.4 | CDS | 34989538 | 34990265 | 34989538 | ID=cds.MS.gene057668.t1;Parent=MS.gene057668.t1 |
| chr4.4 | exon | 34988465 | 34988706 | 34988465 | ID=MS.gene057668.t1.exon2;Parent=MS.gene057668.t1 |
| chr4.4 | CDS | 34988465 | 34988706 | 34988465 | ID=cds.MS.gene057668.t1;Parent=MS.gene057668.t1 |
| chr4.4 | exon | 34988031 | 34988049 | 34988031 | ID=MS.gene057668.t1.exon3;Parent=MS.gene057668.t1 |
| chr4.4 | CDS | 34988031 | 34988049 | 34988031 | ID=cds.MS.gene057668.t1;Parent=MS.gene057668.t1 |
| chr4.4 | exon | 34987449 | 34987666 | 34987449 | ID=MS.gene057668.t1.exon4;Parent=MS.gene057668.t1 |
| chr4.4 | CDS | 34987449 | 34987666 | 34987449 | ID=cds.MS.gene057668.t1;Parent=MS.gene057668.t1 |
| chr4.4 | exon | 34986664 | 34986773 | 34986664 | ID=MS.gene057668.t1.exon5;Parent=MS.gene057668.t1 |
| chr4.4 | CDS | 34986664 | 34986773 | 34986664 | ID=cds.MS.gene057668.t1;Parent=MS.gene057668.t1 |
| chr4.4 | exon | 34986482 | 34986580 | 34986482 | ID=MS.gene057668.t1.exon6;Parent=MS.gene057668.t1 |
| chr4.4 | CDS | 34986482 | 34986580 | 34986482 | ID=cds.MS.gene057668.t1;Parent=MS.gene057668.t1 |
| chr4.4 | exon | 34984685 | 34985138 | 34984685 | ID=MS.gene057668.t1.exon7;Parent=MS.gene057668.t1 |
| chr4.4 | CDS | 34984685 | 34985138 | 34984685 | ID=cds.MS.gene057668.t1;Parent=MS.gene057668.t1 |
| chr4.4 | exon | 34984479 | 34984567 | 34984479 | ID=MS.gene057668.t1.exon8;Parent=MS.gene057668.t1 |
| chr4.4 | CDS | 34984479 | 34984567 | 34984479 | ID=cds.MS.gene057668.t1;Parent=MS.gene057668.t1 |
| Gene Sequence |
| Protein sequence |
