Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36044.t1 | XP_003628547.1 | 98 | 296 | 6 | 0 | 1 | 296 | 1 | 296 | 7.90E-151 | 543.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36044.t1 | Q45223 | 55.7 | 282 | 125 | 0 | 2 | 283 | 3 | 284 | 3.3e-81 | 303.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36044.t1 | G7LDR5 | 98.0 | 296 | 6 | 0 | 1 | 296 | 1 | 296 | 5.7e-151 | 543.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051113 | MS.gene36044 | 0.82872 | 7.68E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36044.t1 | MTR_8g061230 | 97.973 | 296 | 6 | 0 | 1 | 296 | 1 | 296 | 0.0 | 590 |
| MS.gene36044.t1 | MTR_8g058775 | 97.973 | 296 | 6 | 0 | 1 | 296 | 1 | 296 | 0.0 | 590 |
| MS.gene36044.t1 | MTR_0837s0020 | 34.722 | 288 | 164 | 5 | 4 | 291 | 444 | 707 | 1.58e-40 | 150 |
| MS.gene36044.t1 | MTR_6g087670 | 33.108 | 296 | 191 | 3 | 3 | 296 | 305 | 595 | 3.33e-40 | 149 |
| MS.gene36044.t1 | MTR_4g120130 | 31.379 | 290 | 190 | 5 | 4 | 290 | 310 | 593 | 2.37e-35 | 135 |
| MS.gene36044.t1 | MTR_2g436300 | 29.310 | 290 | 196 | 5 | 4 | 290 | 308 | 591 | 2.97e-34 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36044.t1 | AT3G15290 | 71.284 | 296 | 83 | 1 | 1 | 296 | 1 | 294 | 5.65e-161 | 450 |
| MS.gene36044.t1 | AT3G15290 | 75.319 | 235 | 56 | 1 | 62 | 296 | 3 | 235 | 1.42e-134 | 380 |
| MS.gene36044.t1 | AT4G29010 | 30.169 | 295 | 199 | 3 | 4 | 296 | 309 | 598 | 1.32e-38 | 144 |
| MS.gene36044.t1 | AT3G06860 | 29.066 | 289 | 196 | 5 | 4 | 289 | 312 | 594 | 2.74e-34 | 132 |
Find 72 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAAGTCTTCTGCTATTT+TGG | 0.174978 | 8.1:+52541404 | MS.gene36044:CDS |
| TCCCGTGTCAATATCCTCTT+TGG | 0.290455 | 8.1:-52544705 | None:intergenic |
| ATAACCTCCCAGGATTATTC+AGG | 0.326545 | 8.1:+52544611 | MS.gene36044:CDS |
| AGATTGAGAGAGTTGGGATT+TGG | 0.346905 | 8.1:-52541247 | None:intergenic |
| AGCAGCAGATTGAGAGAGTT+GGG | 0.358288 | 8.1:-52541253 | None:intergenic |
| GTGAAGATGATCGGCGTGAT+AGG | 0.361456 | 8.1:+52541090 | MS.gene36044:CDS |
| AGAGAGGTCATTTATATTAG+TGG | 0.366364 | 8.1:-52541304 | None:intergenic |
| CGTGATAGGCGGTGGGCAGA+TGG | 0.376266 | 8.1:+52541104 | MS.gene36044:CDS |
| TTTGGAAACAAGACGGTTGA+TGG | 0.376577 | 8.1:-52541229 | None:intergenic |
| TAGAGCTTGCAGACTTCATT+GGG | 0.378385 | 8.1:+52544762 | MS.gene36044:CDS |
| TTAGAGCTTGCAGACTTCAT+TGG | 0.379697 | 8.1:+52544761 | MS.gene36044:CDS |
| AAGTTCTTCATGCTGGCCTT+GGG | 0.385707 | 8.1:+52544810 | MS.gene36044:CDS |
| AAAGTTCTTCATGCTGGCCT+TGG | 0.388355 | 8.1:+52544809 | MS.gene36044:CDS |
| TAAAATGCTTCATTTATCAT+AGG | 0.392247 | 8.1:-52544659 | None:intergenic |
| CTTCATTTATCATAGGCATA+AGG | 0.408796 | 8.1:-52544652 | None:intergenic |
| ATGAAGTCTGCAAGCTCTAA+AGG | 0.417991 | 8.1:-52544758 | None:intergenic |
| GGCGGTGGGCAGATGGGATC+AGG | 0.421643 | 8.1:+52541111 | MS.gene36044:CDS |
| ACGGTTGATGGAAGAAGAAA+TGG | 0.423622 | 8.1:-52541217 | None:intergenic |
| ATCTCAATCAATTTCATCAC+TGG | 0.424578 | 8.1:-52541931 | None:intergenic |
| TTCTACCACAAGGCCTCAAC+AGG | 0.434342 | 8.1:+52541467 | MS.gene36044:CDS |
| TGCCTTATCTGTTAGGTGAT+AGG | 0.438659 | 8.1:+52541886 | MS.gene36044:intron |
| CTATGAAGCCTGAATAATCC+TGG | 0.456473 | 8.1:-52544619 | None:intergenic |
| TGCCATGCATGGCTGTCAGT+TGG | 0.466231 | 8.1:-52541140 | None:intergenic |
| TATGTTGATGCTGGCAGACT+TGG | 0.468053 | 8.1:+52544869 | MS.gene36044:CDS |
| TATTGACACGGGAATGAAGT+TGG | 0.472291 | 8.1:+52544715 | MS.gene36044:CDS |
| GGAAGAAGAAATGGAAGAAG+AGG | 0.475686 | 8.1:-52541208 | None:intergenic |
| TGAAGTCTGCAAGCTCTAAA+GGG | 0.476098 | 8.1:-52544757 | None:intergenic |
| CTTGGAAGAAAACGAGGTAT+TGG | 0.477660 | 8.1:+52544887 | MS.gene36044:CDS |
| GCTTGCAGACTTCATTGGGT+TGG | 0.479670 | 8.1:+52544766 | MS.gene36044:CDS |
| GTGATAGGCGGTGGGCAGAT+GGG | 0.481302 | 8.1:+52541105 | MS.gene36044:CDS |
| AAGCAGCAGATTGAGAGAGT+TGG | 0.482662 | 8.1:-52541254 | None:intergenic |
| GCCATGCATGGCTGTCAGTT+GGG | 0.491078 | 8.1:-52541139 | None:intergenic |
| ATCCTCTTTGGTTGCAACGT+TGG | 0.493711 | 8.1:-52544693 | None:intergenic |
| ATGATCGGCGTGATAGGCGG+TGG | 0.509523 | 8.1:+52541096 | MS.gene36044:CDS |
| TCTCAATCAATTTCATCACT+GGG | 0.525008 | 8.1:-52541930 | None:intergenic |
| GCAAGCTCTAAAGGGCCCAT+TGG | 0.540034 | 8.1:-52544749 | None:intergenic |
| ATTGACACGGGAATGAAGTT+GGG | 0.542886 | 8.1:+52544716 | MS.gene36044:CDS |
| AGCCAAAATAGCAGAAGACT+TGG | 0.543025 | 8.1:-52541406 | None:intergenic |
| GTGAATATTTATTGTCCCCA+AGG | 0.546668 | 8.1:-52544826 | None:intergenic |
| GCTCTAAAGGGCCCATTGGA+TGG | 0.546955 | 8.1:-52544745 | None:intergenic |
| TTGGGTACTAACCATCCAAT+GGG | 0.547062 | 8.1:+52544734 | MS.gene36044:CDS |
| ATAATGAAAGTTCTTCATGC+TGG | 0.552134 | 8.1:+52544803 | MS.gene36044:CDS |
| CTTGTACAGTATGTTGATGC+TGG | 0.566110 | 8.1:+52544860 | MS.gene36044:CDS |
| AGCTATTGTTGAATCTGAAG+AGG | 0.569249 | 8.1:+52541347 | MS.gene36044:CDS |
| CTGTACCTGTTGAGGCCTTG+TGG | 0.575549 | 8.1:-52541472 | None:intergenic |
| GTTGGGTACTAACCATCCAA+TGG | 0.577080 | 8.1:+52544733 | MS.gene36044:CDS |
| AGTTCTTCATGCTGGCCTTG+GGG | 0.587304 | 8.1:+52544811 | MS.gene36044:CDS |
| AAATGTTGCATCAGAAGTGT+CGG | 0.588207 | 8.1:-52541965 | None:intergenic |
| AGCTAAACGAGTGATAGAGA+TGG | 0.589799 | 8.1:-52541442 | None:intergenic |
| ATGGCGGATGTGAAGATGAT+CGG | 0.590191 | 8.1:+52541081 | MS.gene36044:CDS |
| TATGAAGCCTGAATAATCCT+GGG | 0.592603 | 8.1:-52544618 | None:intergenic |
| GAAGGAACCTGTACCTGTTG+AGG | 0.595599 | 8.1:-52541480 | None:intergenic |
| TCAACATACTGTACAAGTAG+AGG | 0.598353 | 8.1:-52544854 | None:intergenic |
| CACCAACGTTGCAACCAAAG+AGG | 0.600124 | 8.1:+52544691 | MS.gene36044:CDS |
| TACTGTACAAGTAGAGGGCA+AGG | 0.600994 | 8.1:-52544848 | None:intergenic |
| ACAGACGTCGATGCCATGCA+TGG | 0.603164 | 8.1:-52541151 | None:intergenic |
| CAAGACAGTAATAACCTCCC+AGG | 0.607252 | 8.1:+52544601 | MS.gene36044:CDS |
| GCCCAACTGACAGCCATGCA+TGG | 0.609734 | 8.1:+52541138 | MS.gene36044:CDS |
| TGATCGGCGTGATAGGCGGT+GGG | 0.623145 | 8.1:+52541097 | MS.gene36044:CDS |
| GTTGGGATTTGGAAACAAGA+CGG | 0.623816 | 8.1:-52541236 | None:intergenic |
| ACCAAAGAGGATATTGACAC+GGG | 0.632566 | 8.1:+52544704 | MS.gene36044:CDS |
| CTCAATCAATTTCATCACTG+GGG | 0.636264 | 8.1:-52541929 | None:intergenic |
| TCAATCAATTTCATCACTGG+GGG | 0.649968 | 8.1:-52541928 | None:intergenic |
| CAACATACTGTACAAGTAGA+GGG | 0.650224 | 8.1:-52544853 | None:intergenic |
| AACCAAAGAGGATATTGACA+CGG | 0.650319 | 8.1:+52544703 | MS.gene36044:CDS |
| GTTTAGCTTCTTCTACCACA+AGG | 0.657520 | 8.1:+52541457 | MS.gene36044:CDS |
| AAGATGATCGGCGTGATAGG+CGG | 0.661602 | 8.1:+52541093 | MS.gene36044:CDS |
| GGCAGACTTGGAAGAAAACG+AGG | 0.681439 | 8.1:+52544881 | MS.gene36044:CDS |
| TAATGAAATCAGCAACAGAG+AGG | 0.696153 | 8.1:-52541320 | None:intergenic |
| GAAGCCTGAATAATCCTGGG+AGG | 0.727589 | 8.1:-52544615 | None:intergenic |
| CCACAAAAGCACTATCACAG+AGG | 0.763398 | 8.1:+52541992 | MS.gene36044:CDS |
| AAATTGATTGAGATTGTACG+AGG | 0.766743 | 8.1:+52541940 | MS.gene36044:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATTATAGAAAATTTATTA+TGG | - | chr8.1:52542831-52542850 | None:intergenic | 10.0% |
| !! | TAAATTATAATCATACAAAG+TGG | - | chr8.1:52542045-52542064 | None:intergenic | 15.0% |
| !! | TAGAATATACAAAAACAAAA+TGG | + | chr8.1:52543832-52543851 | MS.gene36044:intron | 15.0% |
| !! | TATTTACTATAATTGTTCTA+TGG | - | chr8.1:52542255-52542274 | None:intergenic | 15.0% |
| !!! | AATAAATTTTCTATAATAGC+CGG | + | chr8.1:52542832-52542851 | MS.gene36044:intron | 15.0% |
| !!! | TTAAATTATGAGTATTTTGT+CGG | + | chr8.1:52544330-52544349 | MS.gene36044:intron | 15.0% |
| !! | AGGATATTTAGATTTGATAA+AGG | - | chr8.1:52543474-52543493 | None:intergenic | 20.0% |
| !! | ATAACTAAACAAAAAAAGGA+CGG | - | chr8.1:52544100-52544119 | None:intergenic | 20.0% |
| !! | ATAGCAATATATTACATTCT+AGG | - | chr8.1:52544375-52544394 | None:intergenic | 20.0% |
| !! | ATCTATCAAATATATAACGT+AGG | + | chr8.1:52543956-52543975 | MS.gene36044:intron | 20.0% |
| !! | GAATTAATTGTTAATGTATG+TGG | + | chr8.1:52542201-52542220 | MS.gene36044:intron | 20.0% |
| !! | GGAATTAATGAAAAAAATGT+AGG | - | chr8.1:52541741-52541760 | None:intergenic | 20.0% |
| !! | GGATATTTAGATTTGATAAA+GGG | - | chr8.1:52543473-52543492 | None:intergenic | 20.0% |
| !! | TAAAATGCTTCATTTATCAT+AGG | - | chr8.1:52544662-52544681 | None:intergenic | 20.0% |
| !! | TAGCAATATATTACATTCTA+GGG | - | chr8.1:52544374-52544393 | None:intergenic | 20.0% |
| !! | TTAAAGGTAATTAAGCATAA+AGG | - | chr8.1:52544442-52544461 | None:intergenic | 20.0% |
| !!! | AGAAAATTTATTATGGGTTA+TGG | - | chr8.1:52542824-52542843 | None:intergenic | 20.0% |
| !!! | CACAATTTTAATCTATCAAA+TGG | - | chr8.1:52541853-52541872 | None:intergenic | 20.0% |
| !!! | GAAAATTTATTATGGGTTAT+GGG | - | chr8.1:52542823-52542842 | None:intergenic | 20.0% |
| !!! | TAAATTATGAGTATTTTGTC+GGG | + | chr8.1:52544331-52544350 | MS.gene36044:intron | 20.0% |
| !!! | TCTAGGGTTAATTATATTTT+CGG | - | chr8.1:52544358-52544377 | None:intergenic | 20.0% |
| ! | AAAAATAAGAATTGACGACA+AGG | - | chr8.1:52542619-52542638 | None:intergenic | 25.0% |
| ! | AAAAATTGCTAAACCAAAAG+TGG | - | chr8.1:52541817-52541836 | None:intergenic | 25.0% |
| ! | AACAAAACAAAAGAAGAAGA+AGG | - | chr8.1:52541501-52541520 | None:intergenic | 25.0% |
| ! | AATCAGGTGAAAAATATGTT+TGG | - | chr8.1:52543066-52543085 | None:intergenic | 25.0% |
| ! | AATCTAAATATCCTAAATCC+AGG | + | chr8.1:52543480-52543499 | MS.gene36044:intron | 25.0% |
| ! | ACCTAAATACATAAACATTG+TGG | - | chr8.1:52543737-52543756 | None:intergenic | 25.0% |
| ! | ATATTCAACGAAAAAGAAAG+TGG | - | chr8.1:52542475-52542494 | None:intergenic | 25.0% |
| ! | ATTATAATCATACAAAGTGG+AGG | - | chr8.1:52542042-52542061 | None:intergenic | 25.0% |
| ! | CAAAATGGTTTAGAAAAATC+CGG | + | chr8.1:52542699-52542718 | MS.gene36044:intron | 25.0% |
| ! | CATATGAAAATTCACCATTT+GGG | - | chr8.1:52544168-52544187 | None:intergenic | 25.0% |
| ! | CCGTAAACATAAATTGTAAA+CGG | + | chr8.1:52541713-52541732 | MS.gene36044:intron | 25.0% |
| ! | CCGTTTACAATTTATGTTTA+CGG | - | chr8.1:52541716-52541735 | None:intergenic | 25.0% |
| ! | CCTAAATACATAAACATTGT+GGG | - | chr8.1:52543736-52543755 | None:intergenic | 25.0% |
| ! | CGTAAACATAAATTGTAAAC+GGG | + | chr8.1:52541714-52541733 | MS.gene36044:intron | 25.0% |
| ! | GAAAAATATGTTTGGATCAA+GGG | - | chr8.1:52543058-52543077 | None:intergenic | 25.0% |
| ! | GAGGATAACTAAACAAAAAA+AGG | - | chr8.1:52544104-52544123 | None:intergenic | 25.0% |
| ! | TAGTAAATAACAGTGTGAAT+TGG | + | chr8.1:52542266-52542285 | MS.gene36044:intron | 25.0% |
| ! | TCTATCAAATGGAAAACAAT+AGG | - | chr8.1:52541842-52541861 | None:intergenic | 25.0% |
| ! | TGAAAAATATGTTTGGATCA+AGG | - | chr8.1:52543059-52543078 | None:intergenic | 25.0% |
| ! | TGCAAATAATGTGCATTTAA+GGG | + | chr8.1:52544134-52544153 | MS.gene36044:intron | 25.0% |
| !!! | ACTTTTGGTTTAGCAATTTT+TGG | + | chr8.1:52541816-52541835 | MS.gene36044:intron | 25.0% |
| !!! | ATTGTTTTTATAATTTGCGC+TGG | + | chr8.1:52544555-52544574 | MS.gene36044:intron | 25.0% |
| !!! | TTTTTGTTTAGTTATCCTCT+AGG | + | chr8.1:52544105-52544124 | MS.gene36044:intron | 25.0% |
| AAATAACAGTGTGAATTGGA+TGG | + | chr8.1:52542270-52542289 | MS.gene36044:intron | 30.0% | |
| AAATACATAAACATTGTGGG+TGG | - | chr8.1:52543733-52543752 | None:intergenic | 30.0% | |
| AAATTGATTGAGATTGTACG+AGG | + | chr8.1:52541940-52541959 | MS.gene36044:CDS | 30.0% | |
| AATGTGAATGTTAGCTATGT+TGG | + | chr8.1:52542165-52542184 | MS.gene36044:intron | 30.0% | |
| AATTGTTCTATGGTTTCTGT+TGG | - | chr8.1:52542245-52542264 | None:intergenic | 30.0% | |
| ACAGAATTGATAGAGTCATA+AGG | - | chr8.1:52543926-52543945 | None:intergenic | 30.0% | |
| AGAGAGGTCATTTATATTAG+TGG | - | chr8.1:52541307-52541326 | None:intergenic | 30.0% | |
| ATAATCAATACTCATCATCC+AGG | + | chr8.1:52542969-52542988 | MS.gene36044:intron | 30.0% | |
| ATAATGAAAGTTCTTCATGC+TGG | + | chr8.1:52544803-52544822 | MS.gene36044:CDS | 30.0% | |
| ATCTCAATCAATTTCATCAC+TGG | - | chr8.1:52541934-52541953 | None:intergenic | 30.0% | |
| CATTGTATCAATACATCTCA+CGG | - | chr8.1:52541658-52541677 | None:intergenic | 30.0% | |
| CCCACAATGTTTATGTATTT+AGG | + | chr8.1:52543733-52543752 | MS.gene36044:intron | 30.0% | |
| CTGCAAATAATGTGCATTTA+AGG | + | chr8.1:52544133-52544152 | MS.gene36044:intron | 30.0% | |
| CTTCATTTATCATAGGCATA+AGG | - | chr8.1:52544655-52544674 | None:intergenic | 30.0% | |
| GAAAATAGCTAAACCATTGA+AGG | - | chr8.1:52542801-52542820 | None:intergenic | 30.0% | |
| GATATATGAGAAGAATCCTA+TGG | + | chr8.1:52543779-52543798 | MS.gene36044:intron | 30.0% | |
| GCATATGAAAATTCACCATT+TGG | - | chr8.1:52544169-52544188 | None:intergenic | 30.0% | |
| GTTATTGAAATTTCTTGGTC+TGG | - | chr8.1:52542358-52542377 | None:intergenic | 30.0% | |
| TCTCAATCAATTTCATCACT+GGG | - | chr8.1:52541933-52541952 | None:intergenic | 30.0% | |
| TTTAACCTGCATATACTCTT+TGG | + | chr8.1:52544457-52544476 | MS.gene36044:intron | 30.0% | |
| ! | AAAGAGTATATGCAGGTTAA+AGG | - | chr8.1:52544458-52544477 | None:intergenic | 30.0% |
| ! | AATCTTTGAAGATCTTGAGA+AGG | - | chr8.1:52542751-52542770 | None:intergenic | 30.0% |
| ! | AGTGATCAATTCTAGAAACA+TGG | - | chr8.1:52544004-52544023 | None:intergenic | 30.0% |
| ! | ATATGATTCTGAGTTTTCCT+TGG | - | chr8.1:52543404-52543423 | None:intergenic | 30.0% |
| ! | GGTGAATTTTCATATGCATT+GGG | + | chr8.1:52544172-52544191 | MS.gene36044:intron | 30.0% |
| ! | TAAAATTGTGCTGTGTTGTT+TGG | + | chr8.1:52541863-52541882 | MS.gene36044:intron | 30.0% |
| ! | TATGTTTACGGCCAATTTTA+TGG | - | chr8.1:52541704-52541723 | None:intergenic | 30.0% |
| ! | TCTAGAAGCACATAATAAGT+GGG | + | chr8.1:52544269-52544288 | MS.gene36044:intron | 30.0% |
| ! | TGGTGAATTTTCATATGCAT+TGG | + | chr8.1:52544171-52544190 | MS.gene36044:intron | 30.0% |
| ! | TTCTAGAAGCACATAATAAG+TGG | + | chr8.1:52544268-52544287 | MS.gene36044:intron | 30.0% |
| ! | TTTAGGAAGTGACTTTTGAT+TGG | - | chr8.1:52543431-52543450 | None:intergenic | 30.0% |
| !! | ACATTTTTCAGAGTAACAAC+AGG | - | chr8.1:52542150-52542169 | None:intergenic | 30.0% |
| !! | ATGTTTCTAGAATTGATCAC+TGG | + | chr8.1:52544003-52544022 | MS.gene36044:intron | 30.0% |
| !! | GAAGATGATTTTGAAGACTT+TGG | - | chr8.1:52544935-52544954 | None:intergenic | 30.0% |
| !! | GATGATGAGTATTGATTATG+GGG | - | chr8.1:52542968-52542987 | None:intergenic | 30.0% |
| !! | GGATGATGAGTATTGATTAT+GGG | - | chr8.1:52542969-52542988 | None:intergenic | 30.0% |
| !! | TGGATGATGAGTATTGATTA+TGG | - | chr8.1:52542970-52542989 | None:intergenic | 30.0% |
| AAACCATTGAAGGCTTTCAT+TGG | - | chr8.1:52542791-52542810 | None:intergenic | 35.0% | |
| AACCAAAGAGGATATTGACA+CGG | + | chr8.1:52544703-52544722 | MS.gene36044:CDS | 35.0% | |
| AACCATTGAAGGCTTTCATT+GGG | - | chr8.1:52542790-52542809 | None:intergenic | 35.0% | |
| AACTTTGTTACATAGCCTGT+TGG | - | chr8.1:52543310-52543329 | None:intergenic | 35.0% | |
| AAGCAAGCATGGCTTATAAT+TGG | - | chr8.1:52541762-52541781 | None:intergenic | 35.0% | |
| ACACTATTCAAAGATGAAGG+GGG | - | chr8.1:52543578-52543597 | None:intergenic | 35.0% | |
| ACCACACTATTCAAAGATGA+AGG | - | chr8.1:52543581-52543600 | None:intergenic | 35.0% | |
| ACTTTGTTACATAGCCTGTT+GGG | - | chr8.1:52543309-52543328 | None:intergenic | 35.0% | |
| AGAGGTTGTAATCTTAACCT+TGG | + | chr8.1:52542010-52542029 | MS.gene36044:intron | 35.0% | |
| AGCTATTGTTGAATCTGAAG+AGG | + | chr8.1:52541347-52541366 | MS.gene36044:CDS | 35.0% | |
| AGTAACAACAGGAATGTATG+TGG | - | chr8.1:52542139-52542158 | None:intergenic | 35.0% | |
| ATATCCTAAATCCAGGACAT+AGG | + | chr8.1:52543487-52543506 | MS.gene36044:intron | 35.0% | |
| ATATTCAAGGACGAAGAAAG+TGG | - | chr8.1:52543623-52543642 | None:intergenic | 35.0% | |
| ATGAAACAGAAGAATCTCAG+AGG | - | chr8.1:52544502-52544521 | None:intergenic | 35.0% | |
| ATGAAGGGGGAAAGATTAAA+GGG | - | chr8.1:52543565-52543584 | None:intergenic | 35.0% | |
| CAACATACTGTACAAGTAGA+GGG | - | chr8.1:52544856-52544875 | None:intergenic | 35.0% | |
| CACACTATTCAAAGATGAAG+GGG | - | chr8.1:52543579-52543598 | None:intergenic | 35.0% | |
| CAGCTTGGATGAAACAATTT+AGG | - | chr8.1:52543448-52543467 | None:intergenic | 35.0% | |
| CCACACTATTCAAAGATGAA+GGG | - | chr8.1:52543580-52543599 | None:intergenic | 35.0% | |
| CGTTGAATATTCTCTCCATA+TGG | + | chr8.1:52542485-52542504 | MS.gene36044:intron | 35.0% | |
| CTAAATCTTTCTCCCAAGTT+TGG | - | chr8.1:52544298-52544317 | None:intergenic | 35.0% | |
| CTCAATCAATTTCATCACTG+GGG | - | chr8.1:52541932-52541951 | None:intergenic | 35.0% | |
| GCATCACATCAATCTCAAAA+TGG | + | chr8.1:52542684-52542703 | MS.gene36044:intron | 35.0% | |
| GGCTATGTAACAAAGTTAAC+TGG | + | chr8.1:52543313-52543332 | MS.gene36044:intron | 35.0% | |
| GGGAGGTTATTGAAATTTCT+TGG | - | chr8.1:52542363-52542382 | None:intergenic | 35.0% | |
| GTGAAGAAAAAGATGATTCC+TGG | - | chr8.1:52542990-52543009 | None:intergenic | 35.0% | |
| GTGAATATTTATTGTCCCCA+AGG | - | chr8.1:52544829-52544848 | None:intergenic | 35.0% | |
| TAATCATACAAAGTGGAGGA+TGG | - | chr8.1:52542038-52542057 | None:intergenic | 35.0% | |
| TAATGAAATCAGCAACAGAG+AGG | - | chr8.1:52541323-52541342 | None:intergenic | 35.0% | |
| TATGAAGCCTGAATAATCCT+GGG | - | chr8.1:52544621-52544640 | None:intergenic | 35.0% | |
| TATTCAAGGACGAAGAAAGT+GGG | - | chr8.1:52543622-52543641 | None:intergenic | 35.0% | |
| TCAACATACTGTACAAGTAG+AGG | - | chr8.1:52544857-52544876 | None:intergenic | 35.0% | |
| TCAATCAATTTCATCACTGG+GGG | - | chr8.1:52541931-52541950 | None:intergenic | 35.0% | |
| TCACTTGTGCACCATAAAAT+TGG | + | chr8.1:52541690-52541709 | MS.gene36044:intron | 35.0% | |
| TCTTCTTATTCAAGACAGCT+AGG | + | chr8.1:52544522-52544541 | MS.gene36044:intron | 35.0% | |
| TGTTAGCTATGTTGGTATGA+TGG | + | chr8.1:52542173-52542192 | MS.gene36044:intron | 35.0% | |
| TTCCACTGTTGCATCAAAAA+CGG | + | chr8.1:52541567-52541586 | MS.gene36044:intron | 35.0% | |
| TTCCTATCACCTAACAGATA+AGG | - | chr8.1:52541891-52541910 | None:intergenic | 35.0% | |
| TTGTCCATATGCAAAACCAT+AGG | - | chr8.1:52543798-52543817 | None:intergenic | 35.0% | |
| TTTAGCAGTTTGGGAAAGAA+GGG | - | chr8.1:52542384-52542403 | None:intergenic | 35.0% | |
| ! | AAATGTTGCATCAGAAGTGT+CGG | - | chr8.1:52541968-52541987 | None:intergenic | 35.0% |
| ! | ATTCTGAGTTTTCCTTGGAA+GGG | - | chr8.1:52543399-52543418 | None:intergenic | 35.0% |
| ! | CAAAGGTACGATAGAAAATC+AGG | - | chr8.1:52543082-52543101 | None:intergenic | 35.0% |
| ! | CTTTTTCTTCACTATGATCG+CGG | + | chr8.1:52542998-52543017 | MS.gene36044:intron | 35.0% |
| ! | GAAAACCAAAGAGTATATGC+AGG | - | chr8.1:52544465-52544484 | None:intergenic | 35.0% |
| ! | GATTTTCTATCGTACCTTTG+TGG | + | chr8.1:52543082-52543101 | MS.gene36044:intron | 35.0% |
| ! | TCACATGGAGAGTATATTCA+AGG | - | chr8.1:52543636-52543655 | None:intergenic | 35.0% |
| ! | TTCACAGAATTGAGTTGCAA+GGG | - | chr8.1:52543150-52543169 | None:intergenic | 35.0% |
| ! | TTGATCACTGGCACTATTTT+TGG | + | chr8.1:52544015-52544034 | MS.gene36044:intron | 35.0% |
| ! | TTTTAGCAGTTTGGGAAAGA+AGG | - | chr8.1:52542385-52542404 | None:intergenic | 35.0% |
| ! | TTTTTCTTCACTATGATCGC+GGG | + | chr8.1:52542999-52543018 | MS.gene36044:intron | 35.0% |
| !! | GAATCCTATGGTTTTGCATA+TGG | + | chr8.1:52543791-52543810 | MS.gene36044:intron | 35.0% |
| !! | GGGTTTTCAAGGAATTGAAA+GGG | - | chr8.1:52543195-52543214 | None:intergenic | 35.0% |
| !! | TCAAAGATTTTGAGAGCTTC+AGG | + | chr8.1:52542762-52542781 | MS.gene36044:intron | 35.0% |
| !!! | AAGGGGTTATTTTAGCAGTT+TGG | - | chr8.1:52542394-52542413 | None:intergenic | 35.0% |
| !!! | AGGGGTTATTTTAGCAGTTT+GGG | - | chr8.1:52542393-52542412 | None:intergenic | 35.0% |
| AATGCCTATGTCCTGGATTT+AGG | - | chr8.1:52543494-52543513 | None:intergenic | 40.0% | |
| AATTACACGGAGTAAATCCG+AGG | - | chr8.1:52543365-52543384 | None:intergenic | 40.0% | |
| ACCAAAGAGGATATTGACAC+GGG | + | chr8.1:52544704-52544723 | MS.gene36044:CDS | 40.0% | |
| ACCAGTGAAAAACAAGTGAC+AGG | + | chr8.1:52544241-52544260 | MS.gene36044:intron | 40.0% | |
| AGATTGAGAGAGTTGGGATT+TGG | - | chr8.1:52541250-52541269 | None:intergenic | 40.0% | |
| AGCATAGGTCAGCATTCAAT+AGG | - | chr8.1:52542515-52542534 | None:intergenic | 40.0% | |
| AGCCAAAATAGCAGAAGACT+TGG | - | chr8.1:52541409-52541428 | None:intergenic | 40.0% | |
| AGCTAAACGAGTGATAGAGA+TGG | - | chr8.1:52541445-52541464 | None:intergenic | 40.0% | |
| ATAACCTCCCAGGATTATTC+AGG | + | chr8.1:52544611-52544630 | MS.gene36044:CDS | 40.0% | |
| ATATTGGAGTGGACACTAAC+AGG | + | chr8.1:52543117-52543136 | MS.gene36044:intron | 40.0% | |
| ATCCCAATGAAAGCCTTCAA+TGG | + | chr8.1:52542785-52542804 | MS.gene36044:intron | 40.0% | |
| ATTACACGGAGTAAATCCGA+GGG | - | chr8.1:52543364-52543383 | None:intergenic | 40.0% | |
| ATTCAAGGACGAAGAAAGTG+GGG | - | chr8.1:52543621-52543640 | None:intergenic | 40.0% | |
| ATTCAAGGGGAACAGTTAAG+GGG | - | chr8.1:52542411-52542430 | None:intergenic | 40.0% | |
| ATTGACACGGGAATGAAGTT+GGG | + | chr8.1:52544716-52544735 | MS.gene36044:CDS | 40.0% | |
| ATTTGATAAAGGGAGCAGCT+TGG | - | chr8.1:52543463-52543482 | None:intergenic | 40.0% | |
| CCCTTCATCTTTGAATAGTG+TGG | + | chr8.1:52543577-52543596 | MS.gene36044:intron | 40.0% | |
| CTATGAAGCCTGAATAATCC+TGG | - | chr8.1:52544622-52544641 | None:intergenic | 40.0% | |
| CTTGGAAGAAAACGAGGTAT+TGG | + | chr8.1:52544887-52544906 | MS.gene36044:CDS | 40.0% | |
| CTTGTACAGTATGTTGATGC+TGG | + | chr8.1:52544860-52544879 | MS.gene36044:CDS | 40.0% | |
| CTTTGTTACATAGCCTGTTG+GGG | - | chr8.1:52543308-52543327 | None:intergenic | 40.0% | |
| GAAAATTCACCATTTGGGAG+AGG | - | chr8.1:52544163-52544182 | None:intergenic | 40.0% | |
| GAACTCATGTGATCATGACT+TGG | - | chr8.1:52541795-52541814 | None:intergenic | 40.0% | |
| GAATATACTCTCCATGTGAC+AGG | + | chr8.1:52543637-52543656 | MS.gene36044:intron | 40.0% | |
| GAATATTCTCTCCATATGGC+AGG | + | chr8.1:52542489-52542508 | MS.gene36044:intron | 40.0% | |
| GATGAAGGGGGAAAGATTAA+AGG | - | chr8.1:52543566-52543585 | None:intergenic | 40.0% | |
| GATTCAAGGGGAACAGTTAA+GGG | - | chr8.1:52542412-52542431 | None:intergenic | 40.0% | |
| GGAAGAAGAAATGGAAGAAG+AGG | - | chr8.1:52541211-52541230 | None:intergenic | 40.0% | |
| GGAGAGGTGATTGAATTACA+CGG | - | chr8.1:52543378-52543397 | None:intergenic | 40.0% | |
| GGTAAAAGAGTGATGCGTTT+CGG | - | chr8.1:52543905-52543924 | None:intergenic | 40.0% | |
| GTTGGGATTTGGAAACAAGA+CGG | - | chr8.1:52541239-52541258 | None:intergenic | 40.0% | |
| TAAATACCCCATTCCAGTAG+AGG | - | chr8.1:52542920-52542939 | None:intergenic | 40.0% | |
| TAGAGCTTGCAGACTTCATT+GGG | + | chr8.1:52544762-52544781 | MS.gene36044:CDS | 40.0% | |
| TATCGTACCTTTGTGGTGAT+GGG | + | chr8.1:52543089-52543108 | MS.gene36044:intron | 40.0% | |
| TATTGACACGGGAATGAAGT+TGG | + | chr8.1:52544715-52544734 | MS.gene36044:CDS | 40.0% | |
| TGATTATGGGGAGTTAGACA+AGG | - | chr8.1:52542956-52542975 | None:intergenic | 40.0% | |
| TGCCTTATCTGTTAGGTGAT+AGG | + | chr8.1:52541886-52541905 | MS.gene36044:intron | 40.0% | |
| TGTTCTATGGTTTCTGTTGG+TGG | - | chr8.1:52542242-52542261 | None:intergenic | 40.0% | |
| TGTTTGGATCAAGGGATCAT+TGG | - | chr8.1:52543050-52543069 | None:intergenic | 40.0% | |
| TTAGAGCTTGCAGACTTCAT+TGG | + | chr8.1:52544761-52544780 | MS.gene36044:CDS | 40.0% | |
| TTAGCAGTTTGGGAAAGAAG+GGG | - | chr8.1:52542383-52542402 | None:intergenic | 40.0% | |
| TTATTTGCAGTTGTGCCTAG+AGG | - | chr8.1:52544123-52544142 | None:intergenic | 40.0% | |
| TTCAATATGTGTTGCAGGCT+TGG | + | chr8.1:52544578-52544597 | MS.gene36044:intron | 40.0% | |
| TTGGGTACTAACCATCCAAT+GGG | + | chr8.1:52544734-52544753 | MS.gene36044:CDS | 40.0% | |
| TTTGGAAACAAGACGGTTGA+TGG | - | chr8.1:52541232-52541251 | None:intergenic | 40.0% | |
| TTTGTTACATAGCCTGTTGG+GGG | - | chr8.1:52543307-52543326 | None:intergenic | 40.0% | |
| TTTGTTGAATGCCTATGTCC+TGG | - | chr8.1:52543501-52543520 | None:intergenic | 40.0% | |
| ! | AAATCCGGAAGTGTAAGTAC+AGG | + | chr8.1:52542714-52542733 | MS.gene36044:intron | 40.0% |
| ! | AATCCGGAAGTGTAAGTACA+GGG | + | chr8.1:52542715-52542734 | MS.gene36044:intron | 40.0% |
| ! | ACAGTATGAAGGGGTTTTCA+AGG | - | chr8.1:52543206-52543225 | None:intergenic | 40.0% |
| ! | ACTGGAATGGGGTATTTATC+TGG | + | chr8.1:52542922-52542941 | MS.gene36044:intron | 40.0% |
| ! | AGAGTACCATACGATTCAAG+GGG | - | chr8.1:52542424-52542443 | None:intergenic | 40.0% |
| ! | ATGAAGTCTGCAAGCTCTAA+AGG | - | chr8.1:52544761-52544780 | None:intergenic | 40.0% |
| ! | GATCACATGAGTTCCACTTT+TGG | + | chr8.1:52541801-52541820 | MS.gene36044:intron | 40.0% |
| ! | GATTCTGAGTTTTCCTTGGA+AGG | - | chr8.1:52543400-52543419 | None:intergenic | 40.0% |
| ! | GTTCACAGAATTGAGTTGCA+AGG | - | chr8.1:52543151-52543170 | None:intergenic | 40.0% |
| ! | GTTTAGCTTCTTCTACCACA+AGG | + | chr8.1:52541457-52541476 | MS.gene36044:CDS | 40.0% |
| ! | TCTCTCATTTTCGTAACCCT+CGG | + | chr8.1:52543345-52543364 | MS.gene36044:intron | 40.0% |
| ! | TTTTCTTCACTATGATCGCG+GGG | + | chr8.1:52543000-52543019 | MS.gene36044:intron | 40.0% |
| !! | ACGGTTGATGGAAGAAGAAA+TGG | - | chr8.1:52541220-52541239 | None:intergenic | 40.0% |
| !! | AGAGAGTACCATACGATTCA+AGG | - | chr8.1:52542426-52542445 | None:intergenic | 40.0% |
| !! | CTTGTTTTTCACTGGTTGGA+CGG | - | chr8.1:52544237-52544256 | None:intergenic | 40.0% |
| !! | GAGAGTACCATACGATTCAA+GGG | - | chr8.1:52542425-52542444 | None:intergenic | 40.0% |
| !! | GGGGTTTTCAAGGAATTGAA+AGG | - | chr8.1:52543196-52543215 | None:intergenic | 40.0% |
| !! | GTCACTTGTTTTTCACTGGT+TGG | - | chr8.1:52544241-52544260 | None:intergenic | 40.0% |
| !! | TACCGTTTTTGATGCAACAG+TGG | - | chr8.1:52541572-52541591 | None:intergenic | 40.0% |
| !! | TGAAGTCTGCAAGCTCTAAA+GGG | - | chr8.1:52544760-52544779 | None:intergenic | 40.0% |
| !! | TGCCAAGTCTTCTGCTATTT+TGG | + | chr8.1:52541404-52541423 | MS.gene36044:CDS | 40.0% |
| !! | TGTTTGGTGCCTTATCTGTT+AGG | + | chr8.1:52541879-52541898 | MS.gene36044:intron | 40.0% |
| !!! | TTTGGTTTTCTTCTCTTCCC+TGG | + | chr8.1:52544475-52544494 | MS.gene36044:intron | 40.0% |
| AAGAAGACAGAAGAAGAGCC+AGG | - | chr8.1:52543272-52543291 | None:intergenic | 45.0% | |
| AAGAAGAGCCAGGATTGAAC+AGG | - | chr8.1:52543262-52543281 | None:intergenic | 45.0% | |
| AAGCAGCAGATTGAGAGAGT+TGG | - | chr8.1:52541257-52541276 | None:intergenic | 45.0% | |
| AATAAGTGGGCGACCAAACT+TGG | + | chr8.1:52544282-52544301 | MS.gene36044:intron | 45.0% | |
| ACGAAAAAGAAAGTGGTCCC+AGG | - | chr8.1:52542468-52542487 | None:intergenic | 45.0% | |
| ACTGTTCCCCTTGAATCGTA+TGG | + | chr8.1:52542415-52542434 | MS.gene36044:intron | 45.0% | |
| AGAAGAATCTCAGAGGACCA+GGG | - | chr8.1:52544495-52544514 | None:intergenic | 45.0% | |
| AGAAGAGCCAGGATTGAACA+GGG | - | chr8.1:52543261-52543280 | None:intergenic | 45.0% | |
| AGAGGAACTTCAACTGCTGT+TGG | - | chr8.1:52543231-52543250 | None:intergenic | 45.0% | |
| AGCAGCAGATTGAGAGAGTT+GGG | - | chr8.1:52541256-52541275 | None:intergenic | 45.0% | |
| ATAAGTGGGCGACCAAACTT+GGG | + | chr8.1:52544283-52544302 | MS.gene36044:intron | 45.0% | |
| ATCAATTTCATCACTGGGGG+AGG | - | chr8.1:52541928-52541947 | None:intergenic | 45.0% | |
| ATCCCCTGTACTTACACTTC+CGG | - | chr8.1:52542721-52542740 | None:intergenic | 45.0% | |
| ATCCTCTTTGGTTGCAACGT+TGG | - | chr8.1:52544696-52544715 | None:intergenic | 45.0% | |
| ATTGAACAGGGTCCATCAAG+AGG | - | chr8.1:52543249-52543268 | None:intergenic | 45.0% | |
| CAAGACAGTAATAACCTCCC+AGG | + | chr8.1:52544601-52544620 | MS.gene36044:CDS | 45.0% | |
| CACAATAACAAGGGAGTGAG+GGG | - | chr8.1:52542872-52542891 | None:intergenic | 45.0% | |
| CATTCAATAGGCCTGCCATA+TGG | - | chr8.1:52542503-52542522 | None:intergenic | 45.0% | |
| CCACAATAACAAGGGAGTGA+GGG | - | chr8.1:52542873-52542892 | None:intergenic | 45.0% | |
| CGAAAAAGAAAGTGGTCCCA+GGG | - | chr8.1:52542467-52542486 | None:intergenic | 45.0% | |
| CGATTCAAGGGGAACAGTTA+AGG | - | chr8.1:52542413-52542432 | None:intergenic | 45.0% | |
| CTAGAAACATGGAATGAGCG+TGG | - | chr8.1:52543993-52544012 | None:intergenic | 45.0% | |
| CTATCGTACCTTTGTGGTGA+TGG | + | chr8.1:52543088-52543107 | MS.gene36044:intron | 45.0% | |
| CTGTTGGGAACAGTATGAAG+GGG | - | chr8.1:52543215-52543234 | None:intergenic | 45.0% | |
| GAAAGGGTTACAGCCACAAA+GGG | - | chr8.1:52543179-52543198 | None:intergenic | 45.0% | |
| GAGGAACTTCAACTGCTGTT+GGG | - | chr8.1:52543230-52543249 | None:intergenic | 45.0% | |
| GCAGTTGAAGTTCCTCTTGA+TGG | + | chr8.1:52543234-52543253 | MS.gene36044:intron | 45.0% | |
| GCATGGAGCCACAATAACAA+GGG | - | chr8.1:52542881-52542900 | None:intergenic | 45.0% | |
| GCTGTTGGGAACAGTATGAA+GGG | - | chr8.1:52543216-52543235 | None:intergenic | 45.0% | |
| GTTGGGTACTAACCATCCAA+TGG | + | chr8.1:52544733-52544752 | MS.gene36044:CDS | 45.0% | |
| TACTGTACAAGTAGAGGGCA+AGG | - | chr8.1:52544851-52544870 | None:intergenic | 45.0% | |
| TATGTTGATGCTGGCAGACT+TGG | + | chr8.1:52544869-52544888 | MS.gene36044:CDS | 45.0% | |
| TCCCGTGTCAATATCCTCTT+TGG | - | chr8.1:52544708-52544727 | None:intergenic | 45.0% | |
| TGAAAGGGTTACAGCCACAA+AGG | - | chr8.1:52543180-52543199 | None:intergenic | 45.0% | |
| TGATGCTTCGAGAAGAGGTA+TGG | - | chr8.1:52542670-52542689 | None:intergenic | 45.0% | |
| TGATGTGATGCTTCGAGAAG+AGG | - | chr8.1:52542675-52542694 | None:intergenic | 45.0% | |
| TGCATGGAGCCACAATAACA+AGG | - | chr8.1:52542882-52542901 | None:intergenic | 45.0% | |
| TGCTGTTGGGAACAGTATGA+AGG | - | chr8.1:52543217-52543236 | None:intergenic | 45.0% | |
| ! | AAAGTTCTTCATGCTGGCCT+TGG | + | chr8.1:52544809-52544828 | MS.gene36044:CDS | 45.0% |
| ! | AAGGGAGTGAGGGGATTTTT+GGG | - | chr8.1:52542863-52542882 | None:intergenic | 45.0% |
| ! | ATCCGGAAGTGTAAGTACAG+GGG | + | chr8.1:52542716-52542735 | MS.gene36044:intron | 45.0% |
| ! | ATCGTACCTTTGTGGTGATG+GGG | + | chr8.1:52543090-52543109 | MS.gene36044:intron | 45.0% |
| ! | ATGTGGGTCAGAGCTCTAAT+AGG | - | chr8.1:52543663-52543682 | None:intergenic | 45.0% |
| ! | GATGCTTCGAGAAGAGGTAT+GGG | - | chr8.1:52542669-52542688 | None:intergenic | 45.0% |
| ! | GCTGATTCTAGAAGCAAGCA+TGG | - | chr8.1:52541773-52541792 | None:intergenic | 45.0% |
| ! | GCTGGTTCAATATGTGTTGC+AGG | + | chr8.1:52544573-52544592 | MS.gene36044:intron | 45.0% |
| ! | TAGAGAACCTGCTGTTTGTG+TGG | - | chr8.1:52543706-52543725 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr8.1:52541610-52541629 | None:intergenic | 45.0% |
| !! | AAGTTCTTCATGCTGGCCTT+GGG | + | chr8.1:52544810-52544829 | MS.gene36044:CDS | 45.0% |
| !! | ATGGCGGATGTGAAGATGAT+CGG | + | chr8.1:52541081-52541100 | MS.gene36044:CDS | 45.0% |
| !! | CCACAAAAGCACTATCACAG+AGG | + | chr8.1:52541992-52542011 | MS.gene36044:CDS | 45.0% |
| !! | CCTCTGTGATAGTGCTTTTG+TGG | - | chr8.1:52541995-52542014 | None:intergenic | 45.0% |
| !! | GCCTGTCACTTGTTTTTCAC+TGG | - | chr8.1:52544245-52544264 | None:intergenic | 45.0% |
| !! | TTTTTCACTGGTTGGACGGA+TGG | - | chr8.1:52544233-52544252 | None:intergenic | 45.0% |
| !! | TATTATAGAAAATTTATTAT+GGG | - | chr8.1:52542830-52542849 | None:intergenic | 5.0% |
| AAGATGATCGGCGTGATAGG+CGG | + | chr8.1:52541093-52541112 | MS.gene36044:CDS | 50.0% | |
| ACAAGGCAGTTTCTGCAGAG+GGG | - | chr8.1:52542571-52542590 | None:intergenic | 50.0% | |
| ACCATTTCCTTCTCTCTCCC+TGG | + | chr8.1:52542447-52542466 | MS.gene36044:intron | 50.0% | |
| AGGTCCTCCTCTACTGGAAT+GGG | + | chr8.1:52542910-52542929 | MS.gene36044:intron | 50.0% | |
| ATACCCCATTCCAGTAGAGG+AGG | - | chr8.1:52542917-52542936 | None:intergenic | 50.0% | |
| ATAGCCTGTTGGGGGATGTA+GGG | - | chr8.1:52543299-52543318 | None:intergenic | 50.0% | |
| ATGTACCCCCATCACCACAA+AGG | - | chr8.1:52543099-52543118 | None:intergenic | 50.0% | |
| CAAAGTGGAGGATGGTACCA+AGG | - | chr8.1:52542030-52542049 | None:intergenic | 50.0% | |
| CACCAACGTTGCAACCAAAG+AGG | + | chr8.1:52544691-52544710 | MS.gene36044:CDS | 50.0% | |
| CAGAAACTGCCTTGTCCTCA+AGG | + | chr8.1:52542576-52542595 | MS.gene36044:intron | 50.0% | |
| CAGAAGAATCTCAGAGGACC+AGG | - | chr8.1:52544496-52544515 | None:intergenic | 50.0% | |
| CCATTTCCTTCTCTCTCCCT+GGG | + | chr8.1:52542448-52542467 | MS.gene36044:intron | 50.0% | |
| CTGTGAACAGAGTCCCTTTG+TGG | + | chr8.1:52543163-52543182 | MS.gene36044:intron | 50.0% | |
| GAAGCCTGAATAATCCTGGG+AGG | - | chr8.1:52544618-52544637 | None:intergenic | 50.0% | |
| GAAGGAACCTGTACCTGTTG+AGG | - | chr8.1:52541483-52541502 | None:intergenic | 50.0% | |
| GACAAGGCAGTTTCTGCAGA+GGG | - | chr8.1:52542572-52542591 | None:intergenic | 50.0% | |
| GAGGACCTCTTGGATTTGCA+TGG | - | chr8.1:52542898-52542917 | None:intergenic | 50.0% | |
| GCCACAATAACAAGGGAGTG+AGG | - | chr8.1:52542874-52542893 | None:intergenic | 50.0% | |
| GCTCTAATAGGCCTGTCACA+TGG | - | chr8.1:52543651-52543670 | None:intergenic | 50.0% | |
| GCTTGCAGACTTCATTGGGT+TGG | + | chr8.1:52544766-52544785 | MS.gene36044:CDS | 50.0% | |
| GGCAGACTTGGAAGAAAACG+AGG | + | chr8.1:52544881-52544900 | MS.gene36044:CDS | 50.0% | |
| GTGAAGATGATCGGCGTGAT+AGG | + | chr8.1:52541090-52541109 | MS.gene36044:CDS | 50.0% | |
| TAAGGGTTGCCTCTCCCAAA+TGG | + | chr8.1:52544151-52544170 | MS.gene36044:intron | 50.0% | |
| TCAATCACCTCTCCCTTCCA+AGG | + | chr8.1:52543384-52543403 | MS.gene36044:intron | 50.0% | |
| TGCCTTGTCCTCAAGGCTAA+GGG | + | chr8.1:52542583-52542602 | MS.gene36044:intron | 50.0% | |
| TGGCTCCATGCAAATCCAAG+AGG | + | chr8.1:52542890-52542909 | MS.gene36044:intron | 50.0% | |
| TGTGGTAACCTCTCTCTCCT+GGG | + | chr8.1:52543595-52543614 | MS.gene36044:intron | 50.0% | |
| TTCTACCACAAGGCCTCAAC+AGG | + | chr8.1:52541467-52541486 | MS.gene36044:CDS | 50.0% | |
| ! | AGGGAGTGAGGGGATTTTTG+GGG | - | chr8.1:52542862-52542881 | None:intergenic | 50.0% |
| ! | CAAGGGAGTGAGGGGATTTT+TGG | - | chr8.1:52542864-52542883 | None:intergenic | 50.0% |
| ! | CGATGATAGAGCACCTGTTG+GGG | - | chr8.1:52542547-52542566 | None:intergenic | 50.0% |
| ! | GAATTGAGTTGCAAGGGTGC+AGG | - | chr8.1:52543144-52543163 | None:intergenic | 50.0% |
| ! | GAGTTTTCCTTGGAAGGGAG+AGG | - | chr8.1:52543394-52543413 | None:intergenic | 50.0% |
| ! | GATGGGGGTACATATTGGAG+TGG | + | chr8.1:52543106-52543125 | MS.gene36044:intron | 50.0% |
| ! | GCGATGATAGAGCACCTGTT+GGG | - | chr8.1:52542548-52542567 | None:intergenic | 50.0% |
| ! | TGATGGACCCTGTTCAATCC+TGG | + | chr8.1:52543251-52543270 | MS.gene36044:intron | 50.0% |
| !! | AGTTCTTCATGCTGGCCTTG+GGG | + | chr8.1:52544811-52544830 | MS.gene36044:CDS | 50.0% |
| !! | CCCTCACTCCCTTGTTATTG+TGG | + | chr8.1:52542870-52542889 | MS.gene36044:intron | 50.0% |
| !! | GTGGTGATGGGGGTACATAT+TGG | + | chr8.1:52543101-52543120 | MS.gene36044:intron | 50.0% |
| !! | GTTTGCTTCCCTTAGCCTTG+AGG | - | chr8.1:52542594-52542613 | None:intergenic | 50.0% |
| !! | TCGTACCTTTGTGGTGATGG+GGG | + | chr8.1:52543091-52543110 | MS.gene36044:intron | 50.0% |
| !! | TTCCCTTAGCCTTGAGGACA+AGG | - | chr8.1:52542588-52542607 | None:intergenic | 50.0% |
| !!! | AGGGGATTTTTGGGGTTGAC+CGG | - | chr8.1:52542854-52542873 | None:intergenic | 50.0% |
| ACAGACGTCGATGCCATGCA+TGG | - | chr8.1:52541154-52541173 | None:intergenic | 55.0% | |
| CAAGGCAGTTTCTGCAGAGG+GGG | - | chr8.1:52542570-52542589 | None:intergenic | 55.0% | |
| CACAAGGCCTCAACAGGTAC+AGG | + | chr8.1:52541473-52541492 | MS.gene36044:intron | 55.0% | |
| CATAGCCTGTTGGGGGATGT+AGG | - | chr8.1:52543300-52543319 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr8.1:52541612-52541631 | MS.gene36044:intron | 55.0% | |
| CCCAGGGAGAGAGAAGGAAA+TGG | - | chr8.1:52542451-52542470 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr8.1:52541615-52541634 | None:intergenic | 55.0% | |
| CTGCCTTGTCCTCAAGGCTA+AGG | + | chr8.1:52542582-52542601 | MS.gene36044:intron | 55.0% | |
| CTGTACCTGTTGAGGCCTTG+TGG | - | chr8.1:52541475-52541494 | None:intergenic | 55.0% | |
| GAGGTCCTCCTCTACTGGAA+TGG | + | chr8.1:52542909-52542928 | MS.gene36044:intron | 55.0% | |
| GCAGTTTGGGAAAGAAGGGG+AGG | - | chr8.1:52542380-52542399 | None:intergenic | 55.0% | |
| GCCATGCATGGCTGTCAGTT+GGG | - | chr8.1:52541142-52541161 | None:intergenic | 55.0% | |
| GGACAAGGCAGTTTCTGCAG+AGG | - | chr8.1:52542573-52542592 | None:intergenic | 55.0% | |
| GGTCCTCCTCTACTGGAATG+GGG | + | chr8.1:52542911-52542930 | MS.gene36044:intron | 55.0% | |
| GTGGGGCAGGTTGTGAATGT+GGG | - | chr8.1:52543679-52543698 | None:intergenic | 55.0% | |
| GTGTGGTAACCTCTCTCTCC+TGG | + | chr8.1:52543594-52543613 | MS.gene36044:intron | 55.0% | |
| TCCAAGAGGTCCTCCTCTAC+TGG | + | chr8.1:52542904-52542923 | MS.gene36044:intron | 55.0% | |
| TCCAGTAGAGGAGGACCTCT+TGG | - | chr8.1:52542908-52542927 | None:intergenic | 55.0% | |
| TGCCATGCATGGCTGTCAGT+TGG | - | chr8.1:52541143-52541162 | None:intergenic | 55.0% | |
| TTGGGGAAGGTCGTGAGCAT+AGG | - | chr8.1:52542530-52542549 | None:intergenic | 55.0% | |
| ! | AACCTGCTGTTTGTGTGGCC+TGG | - | chr8.1:52543701-52543720 | None:intergenic | 55.0% |
| ! | GATAGAGCACCTGTTGGGGA+AGG | - | chr8.1:52542543-52542562 | None:intergenic | 55.0% |
| ! | GGCGATGATAGAGCACCTGT+TGG | - | chr8.1:52542549-52542568 | None:intergenic | 55.0% |
| ! | TGCTGTTTGTGTGGCCTGGT+GGG | - | chr8.1:52543697-52543716 | None:intergenic | 55.0% |
| !! | GCAAGCTCTAAAGGGCCCAT+TGG | - | chr8.1:52544752-52544771 | None:intergenic | 55.0% |
| !! | GCTCTAAAGGGCCCATTGGA+TGG | - | chr8.1:52544748-52544767 | None:intergenic | 55.0% |
| AGTGGTCCCAGGGAGAGAGA+AGG | - | chr8.1:52542457-52542476 | None:intergenic | 60.0% | |
| ATGATCGGCGTGATAGGCGG+TGG | + | chr8.1:52541096-52541115 | MS.gene36044:CDS | 60.0% | |
| CACCAGGCCACACAAACAGC+AGG | + | chr8.1:52543696-52543715 | MS.gene36044:intron | 60.0% | |
| CATTCACAACCTGCCCCACC+AGG | + | chr8.1:52543680-52543699 | MS.gene36044:intron | 60.0% | |
| CGATCCCTACATCCCCCAAC+AGG | + | chr8.1:52543292-52543311 | MS.gene36044:intron | 60.0% | |
| GCCCAACTGACAGCCATGCA+TGG | + | chr8.1:52541138-52541157 | MS.gene36044:CDS | 60.0% | |
| GCTGTTTGTGTGGCCTGGTG+GGG | - | chr8.1:52543696-52543715 | None:intergenic | 60.0% | |
| GGTGGGGCAGGTTGTGAATG+TGG | - | chr8.1:52543680-52543699 | None:intergenic | 60.0% | |
| GTGATAGGCGGTGGGCAGAT+GGG | + | chr8.1:52541105-52541124 | MS.gene36044:CDS | 60.0% | |
| TGATCGGCGTGATAGGCGGT+GGG | + | chr8.1:52541097-52541116 | MS.gene36044:CDS | 60.0% | |
| TGCTCACGACCTTCCCCAAC+AGG | + | chr8.1:52542531-52542550 | MS.gene36044:intron | 60.0% | |
| ! | CTGCTGTTTGTGTGGCCTGG+TGG | - | chr8.1:52543698-52543717 | None:intergenic | 60.0% |
| AAGTGGGGCCCAGGAGAGAG+AGG | - | chr8.1:52543606-52543625 | None:intergenic | 65.0% | |
| CGTGATAGGCGGTGGGCAGA+TGG | + | chr8.1:52541104-52541123 | MS.gene36044:CDS | 65.0% | |
| GGACGAAGAAAGTGGGGCCC+AGG | - | chr8.1:52543615-52543634 | None:intergenic | 65.0% | |
| TTTGTGTGGCCTGGTGGGGC+AGG | - | chr8.1:52543692-52543711 | None:intergenic | 65.0% | |
| GGCGGTGGGCAGATGGGATC+AGG | + | chr8.1:52541111-52541130 | MS.gene36044:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 52541081 | 52544964 | 52541081 | ID=MS.gene36044 |
| chr8.1 | mRNA | 52541081 | 52544964 | 52541081 | ID=MS.gene36044.t1;Parent=MS.gene36044 |
| chr8.1 | exon | 52541081 | 52541488 | 52541081 | ID=MS.gene36044.t1.exon1;Parent=MS.gene36044.t1 |
| chr8.1 | CDS | 52541081 | 52541488 | 52541081 | ID=cds.MS.gene36044.t1;Parent=MS.gene36044.t1 |
| chr8.1 | exon | 52541901 | 52542013 | 52541901 | ID=MS.gene36044.t1.exon2;Parent=MS.gene36044.t1 |
| chr8.1 | CDS | 52541901 | 52542013 | 52541901 | ID=cds.MS.gene36044.t1;Parent=MS.gene36044.t1 |
| chr8.1 | exon | 52544595 | 52544964 | 52544595 | ID=MS.gene36044.t1.exon3;Parent=MS.gene36044.t1 |
| chr8.1 | CDS | 52544595 | 52544964 | 52544595 | ID=cds.MS.gene36044.t1;Parent=MS.gene36044.t1 |
| Gene Sequence |
| Protein sequence |
