Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36241.t1 | XP_003597836.2 | 96.6 | 444 | 7 | 1 | 1 | 444 | 8 | 443 | 8.10E-208 | 733 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36241.t1 | Q4VA72 | 47.5 | 179 | 77 | 4 | 4 | 177 | 11 | 177 | 1.7e-36 | 155.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36241.t1 | G7IMH2 | 96.6 | 444 | 7 | 1 | 1 | 444 | 8 | 443 | 5.8e-208 | 733.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051832 | MS.gene36241 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene36241 | 0.830428 | 2.95E-55 | -1.69E-46 |
| MS.gene059935 | MS.gene36241 | 0.807692 | 4.46E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36241.t1 | MTR_2g103110 | 96.622 | 444 | 7 | 1 | 1 | 444 | 8 | 443 | 0.0 | 884 |
| MS.gene36241.t1 | MTR_2g103110 | 98.347 | 363 | 6 | 0 | 82 | 444 | 1 | 363 | 0.0 | 739 |
| MS.gene36241.t1 | MTR_2g103110 | 95.714 | 350 | 7 | 1 | 1 | 350 | 8 | 349 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36241.t1 | AT1G80210 | 66.584 | 404 | 115 | 7 | 1 | 400 | 8 | 395 | 0.0 | 528 |
| MS.gene36241.t1 | AT1G80210 | 68.085 | 376 | 102 | 6 | 1 | 372 | 8 | 369 | 0.0 | 511 |
| MS.gene36241.t1 | AT3G06820 | 67.766 | 394 | 108 | 6 | 1 | 388 | 8 | 388 | 2.75e-178 | 504 |
| MS.gene36241.t1 | AT3G06820 | 67.766 | 394 | 108 | 6 | 1 | 388 | 8 | 388 | 2.75e-178 | 504 |
| MS.gene36241.t1 | AT3G06820 | 65.385 | 312 | 98 | 4 | 82 | 388 | 1 | 307 | 6.08e-132 | 383 |
Find 102 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTGATTCTGGGTTTAT+TGG | 0.115541 | 2.1:-2513531 | MS.gene36241:CDS |
| ATGTATCAACTTCTTGATTC+TGG | 0.141321 | 2.1:-2513540 | MS.gene36241:CDS |
| CACTGAAACCGAAGAGATTA+TGG | 0.203215 | 2.1:-2515808 | MS.gene36241:CDS |
| TTCTTGATTCTGGGTTTATT+GGG | 0.251629 | 2.1:-2513530 | MS.gene36241:CDS |
| ACACCACACTTCGACTTATC+AGG | 0.275809 | 2.1:-2511632 | MS.gene36241:CDS |
| AGCTATGCACCGCTCAAATA+TGG | 0.296293 | 2.1:-2512659 | MS.gene36241:CDS |
| GAGATTATGGGTCTTCTTCT+TGG | 0.309605 | 2.1:-2515795 | MS.gene36241:CDS |
| GAATCACCAGTGTCCTGCTC+TGG | 0.330705 | 2.1:+2513211 | None:intergenic |
| TCTTGAAGTGCGTTGATTGC+AGG | 0.331174 | 2.1:+2511482 | None:intergenic |
| AATAACACAGAACAAGAAAA+AGG | 0.353636 | 2.1:+2515513 | None:intergenic |
| GGAGTGTGACTGCATTGATA+TGG | 0.369051 | 2.1:-2515630 | MS.gene36241:CDS |
| TGTATCAACTTCTTGATTCT+GGG | 0.370430 | 2.1:-2513539 | MS.gene36241:CDS |
| GACTAAGAGAGAATGAAATT+CGG | 0.373072 | 2.1:-2511457 | MS.gene36241:CDS |
| GAAGCAGCAGCCAACTGTTC+AGG | 0.373869 | 2.1:+2515553 | None:intergenic |
| TGAAAATGTCCGAAGAAGTT+TGG | 0.381529 | 2.1:-2515857 | None:intergenic |
| AATGCCGATGCCAACTATCT+AGG | 0.394026 | 2.1:-2512772 | MS.gene36241:CDS |
| AGAGGGAGTGAAGCAAGTTT+AGG | 0.400423 | 2.1:-2511035 | MS.gene36241:CDS |
| CGTCGATCAGACCTTGTTTG+AGG | 0.408498 | 2.1:+2515598 | None:intergenic |
| GAGTGAAGAAGCCAAGAGTC+TGG | 0.408537 | 2.1:-2511078 | MS.gene36241:CDS |
| ACTGAAACCGAAGAGATTAT+GGG | 0.413726 | 2.1:-2515807 | MS.gene36241:CDS |
| AGATGAACTTCCTCGATGTA+TGG | 0.414680 | 2.1:+2510971 | None:intergenic |
| ACTAAGAGAGAATGAAATTC+GGG | 0.428257 | 2.1:-2511456 | MS.gene36241:intron |
| TGATGAATCTATATGAATAA+TGG | 0.429530 | 2.1:+2513288 | None:intergenic |
| GACAATTTAACAACAAGATC+TGG | 0.432323 | 2.1:-2513253 | MS.gene36241:CDS |
| CACAGAATGACTGTTACAAC+TGG | 0.444669 | 2.1:-2514904 | MS.gene36241:CDS |
| GCATGTTAACCAAACTTCTT+CGG | 0.444704 | 2.1:+2515848 | None:intergenic |
| CCTGGTAGCCGGAGCAGAAA+AGG | 0.449380 | 2.1:-2510888 | MS.gene36241:CDS |
| TCTTCTTCTTGGCGATATCC+AGG | 0.452533 | 2.1:-2515784 | MS.gene36241:intron |
| AACAAGATCTGGTTACTTCA+AGG | 0.457060 | 2.1:-2513242 | MS.gene36241:CDS |
| TGCCTCCGCCTCCAGACTCT+TGG | 0.459710 | 2.1:+2511067 | None:intergenic |
| AGCCAAGAGTCTGGAGGCGG+AGG | 0.461420 | 2.1:-2511069 | MS.gene36241:CDS |
| GGAAGAACAACGAGGGTGAT+AGG | 0.461704 | 2.1:-2514883 | MS.gene36241:CDS |
| AAGAAGACCCATAATCTCTT+CGG | 0.464604 | 2.1:+2515800 | None:intergenic |
| GAGAAGTGCTGGTGCTAGTA+AGG | 0.473131 | 2.1:-2513188 | MS.gene36241:intron |
| TAAACTTGCTTCACTCCCTC+TGG | 0.474010 | 2.1:+2511037 | None:intergenic |
| TATGGGAGATGCAACTTGAC+GGG | 0.478253 | 2.1:+2510989 | None:intergenic |
| TAGATAGTTGGCATCGGCAT+TGG | 0.478653 | 2.1:+2512774 | None:intergenic |
| TCTGCTTTCCATCAGATGAC+TGG | 0.487274 | 2.1:+2513356 | None:intergenic |
| GACGGGGAGAAGCAACTTGA+CGG | 0.490854 | 2.1:+2511006 | None:intergenic |
| GAGTGTGACTGCATTGATAT+GGG | 0.495477 | 2.1:-2515629 | MS.gene36241:CDS |
| ATGCCGATGCCAACTATCTA+GGG | 0.495958 | 2.1:-2512771 | MS.gene36241:CDS |
| ACGGGGAGAAGCAACTTGAC+GGG | 0.497948 | 2.1:+2511007 | None:intergenic |
| CATACTTTCTGACATATCCA+TGG | 0.509731 | 2.1:+2512687 | None:intergenic |
| CAGAGTTCAAGTGAATCTCT+TGG | 0.511986 | 2.1:-2510930 | MS.gene36241:CDS |
| ATTGCTTTCCAGTCATCTGA+TGG | 0.523557 | 2.1:-2513364 | MS.gene36241:CDS |
| CTCTGCGAGTTTCTTTGACG+AGG | 0.523918 | 2.1:+2510948 | None:intergenic |
| AATCACCAGTGTCCTGCTCT+GGG | 0.524238 | 2.1:+2513212 | None:intergenic |
| CATAATCTCTTCGGTTTCAG+TGG | 0.524734 | 2.1:+2515809 | None:intergenic |
| TTTACAGGAGACAGAGGTAT+GGG | 0.525737 | 2.1:+2513319 | None:intergenic |
| GATGAACTTCCTCGATGTAT+GGG | 0.533300 | 2.1:+2510972 | None:intergenic |
| ATGATGATAGCGGCGAATCA+AGG | 0.533813 | 2.1:+2511897 | None:intergenic |
| GTTAAATTGTCTGAGGAACT+TGG | 0.540855 | 2.1:+2513265 | None:intergenic |
| GTATGGGAGATGCAACTTGA+CGG | 0.541009 | 2.1:+2510988 | None:intergenic |
| TCAAAGAGTGTAGCTAGTCC+TGG | 0.543158 | 2.1:-2510906 | MS.gene36241:CDS |
| CAAGGATGGCAGCACATGAA+GGG | 0.544109 | 2.1:+2511931 | None:intergenic |
| CAAGGGAGATAGCCCAGAGC+AGG | 0.545536 | 2.1:-2513224 | MS.gene36241:CDS |
| ATTTACAGGAGACAGAGGTA+TGG | 0.546956 | 2.1:+2513318 | None:intergenic |
| TGTGCAAGTTGATTGAGTAT+TGG | 0.549213 | 2.1:-2511603 | MS.gene36241:intron |
| TATCTAGGGAGCGTAAAAGA+TGG | 0.550604 | 2.1:-2512757 | MS.gene36241:CDS |
| GAACAACGAGGGTGATAGGC+TGG | 0.559162 | 2.1:-2514879 | MS.gene36241:CDS |
| GTGTAGCTAGTCCTGGTAGC+CGG | 0.559875 | 2.1:-2510899 | MS.gene36241:CDS |
| TGGTGCAGAGTATATTAGAA+AGG | 0.560870 | 2.1:-2511960 | MS.gene36241:CDS |
| ACAAGGATGGCAGCACATGA+AGG | 0.562454 | 2.1:+2511930 | None:intergenic |
| ACAAGATCTGGTTACTTCAA+GGG | 0.568314 | 2.1:-2513241 | MS.gene36241:CDS |
| ACTGGTGATTCGAGAAGTGC+TGG | 0.570423 | 2.1:-2513199 | MS.gene36241:CDS |
| ACATACCGACATGTGAAGGC+AGG | 0.575866 | 2.1:+2514830 | None:intergenic |
| AGAAGCCAAGAGTCTGGAGG+CGG | 0.576842 | 2.1:-2511072 | MS.gene36241:CDS |
| GCAACATGTACTATTTGAAG+AGG | 0.579067 | 2.1:-2511864 | MS.gene36241:CDS |
| CAGTAATATGAGGATGTGAA+TGG | 0.584536 | 2.1:+2514854 | None:intergenic |
| GGATATGTCAGAAAGTATGC+AGG | 0.584919 | 2.1:-2512683 | MS.gene36241:CDS |
| CATTGCAGTTGATGATCCCA+TGG | 0.590197 | 2.1:-2512704 | MS.gene36241:CDS |
| GAAGGCAGGACAGTAATATG+AGG | 0.590307 | 2.1:+2514844 | None:intergenic |
| TCTTGTTGTTAAATTGTCTG+AGG | 0.596310 | 2.1:+2513258 | None:intergenic |
| GATAGCCCAGAGCAGGACAC+TGG | 0.603898 | 2.1:-2513217 | MS.gene36241:CDS |
| AAGTACATACCGACATGTGA+AGG | 0.609102 | 2.1:+2514826 | None:intergenic |
| AAGCCATCTTACAAAATACA+AGG | 0.610913 | 2.1:-2511823 | MS.gene36241:intron |
| ATGTACTATTTGAAGAGGAA+CGG | 0.613140 | 2.1:-2511859 | MS.gene36241:CDS |
| ATACTTTCTGACATATCCAT+GGG | 0.614506 | 2.1:+2512688 | None:intergenic |
| ACTGTCCTGCCTTCACATGT+CGG | 0.615521 | 2.1:-2514835 | MS.gene36241:intron |
| TTCGCCGCTATCATCATACA+AGG | 0.623157 | 2.1:-2511891 | MS.gene36241:CDS |
| TTACAACGAAGATGCAAACA+AGG | 0.623673 | 2.1:-2513493 | MS.gene36241:intron |
| AAGGATGGCAGCACATGAAG+GGG | 0.623863 | 2.1:+2511932 | None:intergenic |
| TGAAACTAATCCTGAACAGT+TGG | 0.624149 | 2.1:-2515563 | MS.gene36241:CDS |
| GCGGAGGCATCTACGTCCAG+AGG | 0.627316 | 2.1:-2511053 | MS.gene36241:CDS |
| CGGGGAGAAGCAACTTGACG+GGG | 0.643627 | 2.1:+2511008 | None:intergenic |
| GCTCCCTAGATAGTTGGCAT+CGG | 0.649706 | 2.1:+2512768 | None:intergenic |
| GGGGTGCATCTCCTCAAACA+AGG | 0.651860 | 2.1:-2515609 | MS.gene36241:CDS |
| ATCAAGGTTGATAAAAGACA+AGG | 0.656437 | 2.1:+2511913 | None:intergenic |
| CGGAGGCATCTACGTCCAGA+GGG | 0.659336 | 2.1:-2511052 | MS.gene36241:CDS |
| AGTGTGACTGCATTGATATG+GGG | 0.661338 | 2.1:-2515628 | MS.gene36241:CDS |
| ACCTCATGTCCATATTTGAG+CGG | 0.663052 | 2.1:+2512650 | None:intergenic |
| ATGGGAGATGCAACTTGACG+GGG | 0.663091 | 2.1:+2510990 | None:intergenic |
| ACCGCTCAAATATGGACATG+AGG | 0.667262 | 2.1:-2512651 | MS.gene36241:intron |
| TGAAGAAGCCAAGAGTCTGG+AGG | 0.667597 | 2.1:-2511075 | MS.gene36241:CDS |
| AAGCCTGATAAGTCGAAGTG+TGG | 0.672156 | 2.1:+2511629 | None:intergenic |
| GTGTGGTGTATGAAAGCGAG+TGG | 0.677265 | 2.1:+2511646 | None:intergenic |
| ATACTCAATCAACTTGCACA+AGG | 0.679543 | 2.1:+2511606 | None:intergenic |
| AGATCCTTGTATGATGATAG+CGG | 0.689342 | 2.1:+2511887 | None:intergenic |
| TACAACTGGAAGAACAACGA+GGG | 0.713101 | 2.1:-2514890 | MS.gene36241:CDS |
| AGGTTGATAAAAGACAAGGA+TGG | 0.722279 | 2.1:+2511917 | None:intergenic |
| GTTGCATCTCCCATACATCG+AGG | 0.759729 | 2.1:-2510981 | MS.gene36241:CDS |
| TTACAACTGGAAGAACAACG+AGG | 0.766921 | 2.1:-2514891 | MS.gene36241:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAATAAAGAAAAAAT+TGG | + | chr2.1:2510990-2511009 | None:intergenic | 10.0% |
| !!! | AATAAAGAATTATTACTTTT+TGG | - | chr2.1:2515219-2515238 | MS.gene36241:intron | 10.0% |
| !! | AAATAGGACTAATAAATAAA+CGG | + | chr2.1:2515179-2515198 | None:intergenic | 15.0% |
| !! | GTAAATAACAGTAAAAAAAT+TGG | + | chr2.1:2515426-2515445 | None:intergenic | 15.0% |
| !!! | AAAACTCATTTTTAATTCAA+TGG | - | chr2.1:2511266-2511285 | MS.gene36241:intron | 15.0% |
| !!! | GTTTTAAAATAACACATATT+TGG | - | chr2.1:2514747-2514766 | MS.gene36241:intron | 15.0% |
| !!! | TTAAATTGTAATTTTTCCTA+GGG | - | chr2.1:2513904-2513923 | MS.gene36241:intron | 15.0% |
| !!! | TTTAAATTGTAATTTTTCCT+AGG | - | chr2.1:2513903-2513922 | MS.gene36241:intron | 15.0% |
| !!! | TTTATTAGTCCTATTTTTAT+TGG | - | chr2.1:2515183-2515202 | MS.gene36241:intron | 15.0% |
| !! | AAATGCAATTATGATTATAC+TGG | + | chr2.1:2513825-2513844 | None:intergenic | 20.0% |
| !! | AACATTGTGAAATACAAATT+GGG | + | chr2.1:2511041-2511060 | None:intergenic | 20.0% |
| !! | AAGAACAAACCAATAAAAAT+AGG | + | chr2.1:2515195-2515214 | None:intergenic | 20.0% |
| !! | AATAGGACTAATAAATAAAC+GGG | + | chr2.1:2515178-2515197 | None:intergenic | 20.0% |
| !! | ATAGACTATAAATAATAGGT+AGG | + | chr2.1:2512436-2512455 | None:intergenic | 20.0% |
| !! | GATGATAGACTATAAATAAT+AGG | + | chr2.1:2512440-2512459 | None:intergenic | 20.0% |
| !! | GTCAAACTTTGAATTATAAA+TGG | - | chr2.1:2514592-2514611 | MS.gene36241:intron | 20.0% |
| !! | TGATGAATCTATATGAATAA+TGG | + | chr2.1:2513451-2513470 | None:intergenic | 20.0% |
| !! | TTAAAATAACACATATTTGG+TGG | - | chr2.1:2514750-2514769 | MS.gene36241:intron | 20.0% |
| !! | TTGGAAATAAAATTTCATAG+AGG | + | chr2.1:2515407-2515426 | None:intergenic | 20.0% |
| !!! | ATTTTATGGAAACACTATTT+TGG | - | chr2.1:2514982-2515001 | MS.gene36241:intron | 20.0% |
| !!! | CGTACATATATGAAATTTTA+TGG | - | chr2.1:2514968-2514987 | MS.gene36241:intron | 20.0% |
| !!! | TTAGTTCTGAATCTTAATTA+GGG | + | chr2.1:2515455-2515474 | None:intergenic | 20.0% |
| !!! | TTTTATGGAAACACTATTTT+GGG | - | chr2.1:2514983-2515002 | MS.gene36241:intron | 20.0% |
| !!! | TTTTTACTGTTATTTACAGA+AGG | - | chr2.1:2515429-2515448 | MS.gene36241:intron | 20.0% |
| ! | AACATCACTTTATCAACAAA+AGG | + | chr2.1:2513762-2513781 | None:intergenic | 25.0% |
| ! | AATAACACAGAACAAGAAAA+AGG | + | chr2.1:2511226-2511245 | None:intergenic | 25.0% |
| ! | ACATTGTGAAATACAAATTG+GGG | + | chr2.1:2511040-2511059 | None:intergenic | 25.0% |
| ! | ACTGAAATTAGGAAGATTAA+GGG | - | chr2.1:2514306-2514325 | MS.gene36241:intron | 25.0% |
| ! | ATAAAATTTCATAGAGGATC+AGG | + | chr2.1:2515401-2515420 | None:intergenic | 25.0% |
| ! | ATAAAGTGATGTTGATCTTA+TGG | - | chr2.1:2513769-2513788 | MS.gene36241:intron | 25.0% |
| ! | ATAGATACTAGATCAAAATG+TGG | - | chr2.1:2512296-2512315 | MS.gene36241:intron | 25.0% |
| ! | ATAGGCATTTCATATATACT+TGG | + | chr2.1:2514486-2514505 | None:intergenic | 25.0% |
| ! | ATATGAATCAAATATGTTGC+TGG | - | chr2.1:2512261-2512280 | MS.gene36241:intron | 25.0% |
| ! | ATTAAGATTCAGAACTAACT+TGG | - | chr2.1:2515457-2515476 | MS.gene36241:intron | 25.0% |
| ! | ATTAGAAATATAATCATGCG+GGG | - | chr2.1:2514531-2514550 | MS.gene36241:intron | 25.0% |
| ! | ATTGTATAATGATTGTTCAC+AGG | - | chr2.1:2514672-2514691 | MS.gene36241:intron | 25.0% |
| ! | ATTTCTAATTGAAACATGTG+TGG | + | chr2.1:2511429-2511448 | None:intergenic | 25.0% |
| ! | CAACATTGTGAAATACAAAT+TGG | + | chr2.1:2511042-2511061 | None:intergenic | 25.0% |
| ! | CATTACTGTTTACAGTAAAA+TGG | + | chr2.1:2514346-2514365 | None:intergenic | 25.0% |
| ! | CATTAGAAATATAATCATGC+GGG | - | chr2.1:2514530-2514549 | MS.gene36241:intron | 25.0% |
| ! | CTTGAATACATTGAATGTAA+TGG | + | chr2.1:2512351-2512370 | None:intergenic | 25.0% |
| ! | GAAATTCTTTCCTTTATACT+GGG | - | chr2.1:2513724-2513743 | MS.gene36241:intron | 25.0% |
| ! | GAAGTATAAATAGCAGATAT+AGG | + | chr2.1:2512776-2512795 | None:intergenic | 25.0% |
| ! | GCATTAGAAATATAATCATG+CGG | - | chr2.1:2514529-2514548 | MS.gene36241:intron | 25.0% |
| ! | TCACTCACAAAAATATAGAT+TGG | + | chr2.1:2513687-2513706 | None:intergenic | 25.0% |
| ! | TGTAAGACATAGAAAATGTA+TGG | - | chr2.1:2512833-2512852 | MS.gene36241:intron | 25.0% |
| ! | TGTATAACATAAAGGATGTT+AGG | + | chr2.1:2512127-2512146 | None:intergenic | 25.0% |
| ! | TTACAGTAAAATGGATATCA+GGG | + | chr2.1:2514337-2514356 | None:intergenic | 25.0% |
| ! | TTAGTGTACTATGTTATCAT+AGG | + | chr2.1:2514504-2514523 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATGGATATC+AGG | + | chr2.1:2514338-2514357 | None:intergenic | 25.0% |
| !! | ACAGAAATCTCAAATTTGTT+GGG | + | chr2.1:2515559-2515578 | None:intergenic | 25.0% |
| !! | ATAATTGCATTTTTCTGTCT+AGG | - | chr2.1:2513833-2513852 | MS.gene36241:intron | 25.0% |
| !! | ATTAAGTTGTTTAACCAAAC+AGG | + | chr2.1:2511480-2511499 | None:intergenic | 25.0% |
| !! | TAATGATTATACTGTTGCTT+TGG | + | chr2.1:2513135-2513154 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTAACCAAACA+GGG | + | chr2.1:2511479-2511498 | None:intergenic | 25.0% |
| !! | TTTACTATTTTGTAGATGTG+CGG | - | chr2.1:2513164-2513183 | MS.gene36241:intron | 25.0% |
| !!! | ATAATGGAGCTTTTATTTAC+AGG | + | chr2.1:2513435-2513454 | None:intergenic | 25.0% |
| !!! | ATTTACTTTGGTTTTGGATA+GGG | + | chr2.1:2512400-2512419 | None:intergenic | 25.0% |
| !!! | GTTAGTTCTGAATCTTAATT+AGG | + | chr2.1:2515456-2515475 | None:intergenic | 25.0% |
| !!! | GTTCTATAAATTAGGTTGAA+AGG | - | chr2.1:2512910-2512929 | MS.gene36241:intron | 25.0% |
| !!! | TACTTCACTTTTGGTATTTA+AGG | - | chr2.1:2512790-2512809 | MS.gene36241:CDS | 25.0% |
| !!! | TGCTATTTATACTTCACTTT+TGG | - | chr2.1:2512781-2512800 | MS.gene36241:CDS | 25.0% |
| !!! | TGTTATTTTAAAACCCAAGA+TGG | + | chr2.1:2514741-2514760 | None:intergenic | 25.0% |
| AAAAAACACGCCTAAATTGT+CGG | + | chr2.1:2514158-2514177 | None:intergenic | 30.0% | |
| AAACCATTGCATTAAACACA+TGG | + | chr2.1:2511721-2511740 | None:intergenic | 30.0% | |
| AAACTGTTGTCTATTCTTCA+TGG | + | chr2.1:2513609-2513628 | None:intergenic | 30.0% | |
| AAAGTACAAACAAATGGCAT+AGG | + | chr2.1:2515050-2515069 | None:intergenic | 30.0% | |
| AACCATTGCATTAAACACAT+GGG | + | chr2.1:2511720-2511739 | None:intergenic | 30.0% | |
| AACTGTTGTCTATTCTTCAT+GGG | + | chr2.1:2513608-2513627 | None:intergenic | 30.0% | |
| AAGCCATCTTACAAAATACA+AGG | - | chr2.1:2514913-2514932 | MS.gene36241:intron | 30.0% | |
| AATGGAAGTGATTACTGTAA+AGG | - | chr2.1:2514610-2514629 | MS.gene36241:intron | 30.0% | |
| AATTGGGATTATACTATACC+TGG | + | chr2.1:2510973-2510992 | None:intergenic | 30.0% | |
| ACCTCATAAAAGATTAGACA+TGG | + | chr2.1:2514702-2514721 | None:intergenic | 30.0% | |
| ACTAAGAGAGAATGAAATTC+GGG | - | chr2.1:2515280-2515299 | MS.gene36241:intron | 30.0% | |
| AGAACAGCAACTATCAAAAT+TGG | + | chr2.1:2511760-2511779 | None:intergenic | 30.0% | |
| AGAAGACAATATCGAAACAA+TGG | + | chr2.1:2511952-2511971 | None:intergenic | 30.0% | |
| AGTCTTCGTATAATTTCTCA+TGG | + | chr2.1:2512531-2512550 | None:intergenic | 30.0% | |
| AGTGAAGTTCTTAAAGATCA+GGG | - | chr2.1:2513702-2513721 | MS.gene36241:intron | 30.0% | |
| ATACTTTCTGACATATCCAT+GGG | + | chr2.1:2514051-2514070 | None:intergenic | 30.0% | |
| ATGTATCAACTTCTTGATTC+TGG | - | chr2.1:2513196-2513215 | MS.gene36241:CDS | 30.0% | |
| ATTGAATGTAATTACACCTG+CGG | - | chr2.1:2511383-2511402 | MS.gene36241:intron | 30.0% | |
| CAGTACTCACTATTCATATA+CGG | - | chr2.1:2512962-2512981 | MS.gene36241:intron | 30.0% | |
| CCATTTGTTTGTACTTTGTA+GGG | - | chr2.1:2515053-2515072 | MS.gene36241:intron | 30.0% | |
| CTACGAACTGTATAACATAA+AGG | + | chr2.1:2512135-2512154 | None:intergenic | 30.0% | |
| CTGAAATTAGGAAGATTAAG+GGG | - | chr2.1:2514307-2514326 | MS.gene36241:intron | 30.0% | |
| CTGTTTCAATGAAACAATAC+AGG | + | chr2.1:2512572-2512591 | None:intergenic | 30.0% | |
| GAAGACAATATCGAAACAAT+GGG | + | chr2.1:2511951-2511970 | None:intergenic | 30.0% | |
| GACAATTTAACAACAAGATC+TGG | - | chr2.1:2513483-2513502 | MS.gene36241:intron | 30.0% | |
| GACAGAAATCTCAAATTTGT+TGG | + | chr2.1:2515560-2515579 | None:intergenic | 30.0% | |
| GACTAAGAGAGAATGAAATT+CGG | - | chr2.1:2515279-2515298 | MS.gene36241:intron | 30.0% | |
| GACTGAAATTAGGAAGATTA+AGG | - | chr2.1:2514305-2514324 | MS.gene36241:intron | 30.0% | |
| GCAATTATGATTATACTGGT+GGG | + | chr2.1:2513821-2513840 | None:intergenic | 30.0% | |
| GCTAGAGAGTTCTATAAATT+AGG | - | chr2.1:2512902-2512921 | MS.gene36241:intron | 30.0% | |
| GGAAATTCTTTCCTTTATAC+TGG | - | chr2.1:2513723-2513742 | MS.gene36241:intron | 30.0% | |
| TACGGATTCTAAACTTCTAA+TGG | - | chr2.1:2512980-2512999 | MS.gene36241:intron | 30.0% | |
| TCATAAATGCCATACACATT+AGG | + | chr2.1:2512033-2512052 | None:intergenic | 30.0% | |
| TGCAATTATGATTATACTGG+TGG | + | chr2.1:2513822-2513841 | None:intergenic | 30.0% | |
| TGTATCAACTTCTTGATTCT+GGG | - | chr2.1:2513197-2513216 | MS.gene36241:CDS | 30.0% | |
| TGTTAGCATAGATTTGAGAA+AGG | - | chr2.1:2512095-2512114 | MS.gene36241:intron | 30.0% | |
| TGTTTATCAACCGACAATTT+AGG | - | chr2.1:2514145-2514164 | MS.gene36241:intron | 30.0% | |
| TTACATTTGAATGCAGAACA+TGG | - | chr2.1:2513641-2513660 | MS.gene36241:intron | 30.0% | |
| TTAGAAATATAATCATGCGG+GGG | - | chr2.1:2514532-2514551 | MS.gene36241:intron | 30.0% | |
| TTCCTAATTTCAGTCTCTAA+TGG | + | chr2.1:2514300-2514319 | None:intergenic | 30.0% | |
| TTCTTGATTCTGGGTTTATT+GGG | - | chr2.1:2513206-2513225 | MS.gene36241:CDS | 30.0% | |
| ! | AATAACTTGTGAGCATGTTT+AGG | + | chr2.1:2515530-2515549 | None:intergenic | 30.0% |
| ! | AATTGTAATTTTTCCTAGGG+TGG | - | chr2.1:2513907-2513926 | MS.gene36241:intron | 30.0% |
| ! | ACCATGTCTAATCTTTTATG+AGG | - | chr2.1:2514698-2514717 | MS.gene36241:intron | 30.0% |
| ! | ATTGTAATTTTTCCTAGGGT+GGG | - | chr2.1:2513908-2513927 | MS.gene36241:intron | 30.0% |
| ! | TGCTTTGGATAAAATCAAAC+AGG | + | chr2.1:2513120-2513139 | None:intergenic | 30.0% |
| ! | TTGCTGTTCTTAGTGATTTA+AGG | - | chr2.1:2511770-2511789 | MS.gene36241:intron | 30.0% |
| !! | ATCAAGGTTGATAAAAGACA+AGG | + | chr2.1:2514826-2514845 | None:intergenic | 30.0% |
| !! | ATTTTTCAGCATTCGAAGAA+TGG | - | chr2.1:2511084-2511103 | MS.gene36241:CDS | 30.0% |
| !! | GTCAACAGTATTTTTGTGTA+TGG | - | chr2.1:2512163-2512182 | MS.gene36241:intron | 30.0% |
| !! | TCACTTTTGGTATTTAAGGT+AGG | - | chr2.1:2512794-2512813 | MS.gene36241:CDS | 30.0% |
| !! | TCTTGTTGTTAAATTGTCTG+AGG | + | chr2.1:2513481-2513500 | None:intergenic | 30.0% |
| !! | TTTTTCAGCATTCGAAGAAT+GGG | - | chr2.1:2511085-2511104 | MS.gene36241:CDS | 30.0% |
| !!! | GATTTACTTTGGTTTTGGAT+AGG | + | chr2.1:2512401-2512420 | None:intergenic | 30.0% |
| !!! | TTGTTTTAGTTGTTTGTGCT+TGG | - | chr2.1:2511992-2512011 | MS.gene36241:intron | 30.0% |
| AAAGGTTACAGTAGAATGCA+GGG | + | chr2.1:2512699-2512718 | None:intergenic | 35.0% | |
| AAATTAGGAAGATTAAGGGG+AGG | - | chr2.1:2514310-2514329 | MS.gene36241:intron | 35.0% | |
| AACAAGATCTGGTTACTTCA+AGG | - | chr2.1:2513494-2513513 | MS.gene36241:CDS | 35.0% | |
| AAGAAGACCCATAATCTCTT+CGG | + | chr2.1:2510939-2510958 | None:intergenic | 35.0% | |
| AAGGAAAGCTTCATAAGCAA+AGG | + | chr2.1:2514443-2514462 | None:intergenic | 35.0% | |
| AAGTCAATAGACAGTGAAGA+TGG | + | chr2.1:2515610-2515629 | None:intergenic | 35.0% | |
| AATATCGAAACAATGGGAGA+CGG | + | chr2.1:2511945-2511964 | None:intergenic | 35.0% | |
| AATCAAATATGTTGCTGGAG+AGG | - | chr2.1:2512266-2512285 | MS.gene36241:intron | 35.0% | |
| AATTAGGAAGATTAAGGGGA+GGG | - | chr2.1:2514311-2514330 | MS.gene36241:intron | 35.0% | |
| ACAAGATAGTTTCTCCATCT+TGG | - | chr2.1:2514724-2514743 | MS.gene36241:intron | 35.0% | |
| ACAAGATCTGGTTACTTCAA+GGG | - | chr2.1:2513495-2513514 | MS.gene36241:CDS | 35.0% | |
| ACATAGGACATGATAGAAGA+GGG | + | chr2.1:2515485-2515504 | None:intergenic | 35.0% | |
| ACTGAAACCGAAGAGATTAT+GGG | - | chr2.1:2510929-2510948 | MS.gene36241:CDS | 35.0% | |
| ACTGTTGTCTATTCTTCATG+GGG | + | chr2.1:2513607-2513626 | None:intergenic | 35.0% | |
| AGATCCTTGTATGATGATAG+CGG | + | chr2.1:2514852-2514871 | None:intergenic | 35.0% | |
| ATAACTGTACATGCCATGTA+GGG | + | chr2.1:2512747-2512766 | None:intergenic | 35.0% | |
| ATACTCAATCAACTTGCACA+AGG | + | chr2.1:2515133-2515152 | None:intergenic | 35.0% | |
| ATTTGAATGCAGAACATGGT+GGG | - | chr2.1:2513645-2513664 | MS.gene36241:intron | 35.0% | |
| ATTTGCATCAGCCAAATGAT+AGG | + | chr2.1:2512500-2512519 | None:intergenic | 35.0% | |
| CAAGATAGTTTCTCCATCTT+GGG | - | chr2.1:2514725-2514744 | MS.gene36241:intron | 35.0% | |
| CAGTAATATGAGGATGTGAA+TGG | + | chr2.1:2511885-2511904 | None:intergenic | 35.0% | |
| CATACTTTCTGACATATCCA+TGG | + | chr2.1:2514052-2514071 | None:intergenic | 35.0% | |
| CATGTTGTCAGTATCTTAAG+AGG | - | chr2.1:2515349-2515368 | MS.gene36241:intron | 35.0% | |
| CATTCTGTGCTATGAAGTTA+AGG | + | chr2.1:2511821-2511840 | None:intergenic | 35.0% | |
| CCAACTTCAACATCAATTGA+AGG | - | chr2.1:2512219-2512238 | MS.gene36241:intron | 35.0% | |
| CCATCTTACAAAATACAAGG+TGG | - | chr2.1:2514916-2514935 | MS.gene36241:intron | 35.0% | |
| CCCTACAAAGTACAAACAAA+TGG | + | chr2.1:2515056-2515075 | None:intergenic | 35.0% | |
| CCTTCAATTGATGTTGAAGT+TGG | + | chr2.1:2512222-2512241 | None:intergenic | 35.0% | |
| CTAACTAACTCACAGACAAA+GGG | - | chr2.1:2512469-2512488 | MS.gene36241:intron | 35.0% | |
| CTCTTAAGATACTGACAACA+TGG | + | chr2.1:2515351-2515370 | None:intergenic | 35.0% | |
| CTTCTTGATTCTGGGTTTAT+TGG | - | chr2.1:2513205-2513224 | MS.gene36241:CDS | 35.0% | |
| GAACTGAATCCTAATGTGTA+TGG | - | chr2.1:2512021-2512040 | MS.gene36241:intron | 35.0% | |
| GAGAGCTTATGAAAATAAGC+TGG | - | chr2.1:2511613-2511632 | MS.gene36241:CDS | 35.0% | |
| GAGTGAAGTTCTTAAAGATC+AGG | - | chr2.1:2513701-2513720 | MS.gene36241:intron | 35.0% | |
| GATCTTATGGAAATGTGTTC+AGG | - | chr2.1:2513782-2513801 | MS.gene36241:intron | 35.0% | |
| GCATACAAAACCCAGTATAA+AGG | + | chr2.1:2513737-2513756 | None:intergenic | 35.0% | |
| GCATGTTAACCAAACTTCTT+CGG | + | chr2.1:2510891-2510910 | None:intergenic | 35.0% | |
| GCCATTTGTTTGTACTTTGT+AGG | - | chr2.1:2515052-2515071 | MS.gene36241:intron | 35.0% | |
| GGCATTTCATATATACTTGG+TGG | + | chr2.1:2514483-2514502 | None:intergenic | 35.0% | |
| GGGTATTATTCAGTGATTTG+TGG | + | chr2.1:2512679-2512698 | None:intergenic | 35.0% | |
| GTTAAATTGTCTGAGGAACT+TGG | + | chr2.1:2513474-2513493 | None:intergenic | 35.0% | |
| TAACTAACTCACAGACAAAG+GGG | - | chr2.1:2512470-2512489 | MS.gene36241:intron | 35.0% | |
| TACATAGGACATGATAGAAG+AGG | + | chr2.1:2515486-2515505 | None:intergenic | 35.0% | |
| TAGAAATATAATCATGCGGG+GGG | - | chr2.1:2514533-2514552 | MS.gene36241:intron | 35.0% | |
| TAGTATATAAAGCTCAACCC+AGG | - | chr2.1:2514234-2514253 | MS.gene36241:intron | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr2.1:2511694-2511713 | MS.gene36241:intron | 35.0% | |
| TCTAACTAACTCACAGACAA+AGG | - | chr2.1:2512468-2512487 | MS.gene36241:intron | 35.0% | |
| TCTACTGTAACCTTTCTGAA+TGG | - | chr2.1:2512704-2512723 | MS.gene36241:CDS | 35.0% | |
| TGAAACTAATCCTGAACAGT+TGG | - | chr2.1:2511173-2511192 | MS.gene36241:intron | 35.0% | |
| TGCCATTAGAGACTGAAATT+AGG | - | chr2.1:2514295-2514314 | MS.gene36241:intron | 35.0% | |
| TGCTTCATAAGTGATATGTG+AGG | + | chr2.1:2511304-2511323 | None:intergenic | 35.0% | |
| TGGTGCAGAGTATATTAGAA+AGG | - | chr2.1:2514776-2514795 | MS.gene36241:intron | 35.0% | |
| TGTTTGTACTTTGTAGGGAT+GGG | - | chr2.1:2515058-2515077 | MS.gene36241:intron | 35.0% | |
| TTACAACGAAGATGCAAACA+AGG | - | chr2.1:2513243-2513262 | MS.gene36241:CDS | 35.0% | |
| TTAGTTGTTTGTGCTTGGAT+TGG | - | chr2.1:2511997-2512016 | MS.gene36241:intron | 35.0% | |
| TTCAATGTATTCAAGCATCC+AGG | - | chr2.1:2512356-2512375 | MS.gene36241:intron | 35.0% | |
| TTCCTCAAAAGTTTGTGATC+TGG | - | chr2.1:2513012-2513031 | MS.gene36241:intron | 35.0% | |
| TTGTCAGTATCTTAAGAGGT+TGG | - | chr2.1:2515353-2515372 | MS.gene36241:intron | 35.0% | |
| TTGTTTGTACTTTGTAGGGA+TGG | - | chr2.1:2515057-2515076 | MS.gene36241:intron | 35.0% | |
| TTTGCTTATGAAGCTTTCCT+TGG | - | chr2.1:2514442-2514461 | MS.gene36241:intron | 35.0% | |
| ! | AACCAGATCACAAACTTTTG+AGG | + | chr2.1:2513017-2513036 | None:intergenic | 35.0% |
| ! | ATATATACTTGGTGGAACAG+TGG | + | chr2.1:2514475-2514494 | None:intergenic | 35.0% |
| ! | CCACCTTGTATTTTGTAAGA+TGG | + | chr2.1:2514919-2514938 | None:intergenic | 35.0% |
| ! | GCTTATTTGAGTTTACCTAC+CGG | + | chr2.1:2511684-2511703 | None:intergenic | 35.0% |
| ! | GCTTTGAACTGTATTCAGAT+AGG | - | chr2.1:2513336-2513355 | MS.gene36241:CDS | 35.0% |
| ! | TTGTAATTTTTCCTAGGGTG+GGG | - | chr2.1:2513909-2513928 | MS.gene36241:intron | 35.0% |
| !! | AGGTTGATAAAAGACAAGGA+TGG | + | chr2.1:2514822-2514841 | None:intergenic | 35.0% |
| !! | ATCACAAACTTTTGAGGAAG+AGG | + | chr2.1:2513011-2513030 | None:intergenic | 35.0% |
| !! | CGACAGATTTACTTTGGTTT+TGG | + | chr2.1:2512406-2512425 | None:intergenic | 35.0% |
| !! | CTTTTATTTACAGGAGACAG+AGG | + | chr2.1:2513426-2513445 | None:intergenic | 35.0% |
| !! | TCAAGTTGAACCATTCAGAA+AGG | + | chr2.1:2512717-2512736 | None:intergenic | 35.0% |
| !! | TGTGCAAGTTGATTGAGTAT+TGG | - | chr2.1:2515133-2515152 | MS.gene36241:intron | 35.0% |
| !!! | GACAATTTAGGCGTGTTTTT+TGG | - | chr2.1:2514157-2514176 | MS.gene36241:intron | 35.0% |
| !!! | TTAGGCGTGTTTTTTGGATT+TGG | - | chr2.1:2514163-2514182 | MS.gene36241:intron | 35.0% |
| !!! | TTTGGATAGGGTTTTAGAGT+GGG | + | chr2.1:2512388-2512407 | None:intergenic | 35.0% |
| !!! | TTTTGGATAGGGTTTTAGAG+TGG | + | chr2.1:2512389-2512408 | None:intergenic | 35.0% |
| AAAGGGGGTTTCCTATCATT+TGG | - | chr2.1:2512486-2512505 | MS.gene36241:intron | 40.0% | |
| AACGAAGATGCAAACAAGGT+TGG | - | chr2.1:2513247-2513266 | MS.gene36241:CDS | 40.0% | |
| AACTAACTCACAGACAAAGG+GGG | - | chr2.1:2512471-2512490 | MS.gene36241:intron | 40.0% | |
| AAGTACATACCGACATGTGA+AGG | + | chr2.1:2511913-2511932 | None:intergenic | 40.0% | |
| ACATGTCGGTATGTACTTTC+GGG | - | chr2.1:2511915-2511934 | MS.gene36241:CDS | 40.0% | |
| ACCTCATGTCCATATTTGAG+CGG | + | chr2.1:2514089-2514108 | None:intergenic | 40.0% | |
| AGATGAACTTCCTCGATGTA+TGG | + | chr2.1:2515768-2515787 | None:intergenic | 40.0% | |
| ATATCGAAACAATGGGAGAC+GGG | + | chr2.1:2511944-2511963 | None:intergenic | 40.0% | |
| ATTAAACACATGGGCCTGTT+TGG | + | chr2.1:2511711-2511730 | None:intergenic | 40.0% | |
| ATTGCTTTCCAGTCATCTGA+TGG | - | chr2.1:2513372-2513391 | MS.gene36241:CDS | 40.0% | |
| ATTTACAGGAGACAGAGGTA+TGG | + | chr2.1:2513421-2513440 | None:intergenic | 40.0% | |
| CACAGAATGACTGTTACAAC+TGG | - | chr2.1:2511832-2511851 | MS.gene36241:CDS | 40.0% | |
| CACATGTCGGTATGTACTTT+CGG | - | chr2.1:2511914-2511933 | MS.gene36241:CDS | 40.0% | |
| CACTGAAACCGAAGAGATTA+TGG | - | chr2.1:2510928-2510947 | MS.gene36241:CDS | 40.0% | |
| CAGAGTTCAAGTGAATCTCT+TGG | - | chr2.1:2515806-2515825 | MS.gene36241:CDS | 40.0% | |
| CATAATCTCTTCGGTTTCAG+TGG | + | chr2.1:2510930-2510949 | None:intergenic | 40.0% | |
| CATTTGAATGCAGAACATGG+TGG | - | chr2.1:2513644-2513663 | MS.gene36241:intron | 40.0% | |
| GAAAGGTTACAGTAGAATGC+AGG | + | chr2.1:2512700-2512719 | None:intergenic | 40.0% | |
| GAGATTATGGGTCTTCTTCT+TGG | - | chr2.1:2510941-2510960 | MS.gene36241:CDS | 40.0% | |
| GATAACTGTACATGCCATGT+AGG | + | chr2.1:2512748-2512767 | None:intergenic | 40.0% | |
| GATGAACTTCCTCGATGTAT+GGG | + | chr2.1:2515767-2515786 | None:intergenic | 40.0% | |
| TACAACTGGAAGAACAACGA+GGG | - | chr2.1:2511846-2511865 | MS.gene36241:CDS | 40.0% | |
| TCACTTATGAAGCAGAGACA+CGG | - | chr2.1:2511310-2511329 | MS.gene36241:intron | 40.0% | |
| TGACCTGGTGATAAATGTCT+GGG | - | chr2.1:2514257-2514276 | MS.gene36241:intron | 40.0% | |
| TTACAACTGGAAGAACAACG+AGG | - | chr2.1:2511845-2511864 | MS.gene36241:CDS | 40.0% | |
| TTCTGCAGAGCATATCACTT+AGG | - | chr2.1:2511453-2511472 | MS.gene36241:intron | 40.0% | |
| ! | AGTGTGACTGCATTGATATG+GGG | - | chr2.1:2511108-2511127 | MS.gene36241:intron | 40.0% |
| ! | CTACATCTAAAGCGCTACAT+AGG | + | chr2.1:2515501-2515520 | None:intergenic | 40.0% |
| ! | GAGTGTGACTGCATTGATAT+GGG | - | chr2.1:2511107-2511126 | MS.gene36241:intron | 40.0% |
| ! | GGATATGTCAGAAAGTATGC+AGG | - | chr2.1:2514053-2514072 | MS.gene36241:intron | 40.0% |
| ! | TAACACATATTTGGTGGCAG+TGG | - | chr2.1:2514756-2514775 | MS.gene36241:intron | 40.0% |
| ! | TATCTAGGGAGCGTAAAAGA+TGG | - | chr2.1:2513979-2513998 | MS.gene36241:intron | 40.0% |
| ! | TGTAATTTTTCCTAGGGTGG+GGG | - | chr2.1:2513910-2513929 | MS.gene36241:intron | 40.0% |
| ! | TTTACAGGAGACAGAGGTAT+GGG | + | chr2.1:2513420-2513439 | None:intergenic | 40.0% |
| ! | TTTTACGCTCCCTAGATAGT+TGG | + | chr2.1:2513977-2513996 | None:intergenic | 40.0% |
| !! | AGGTTGAAAGGCTTTTTAGC+AGG | - | chr2.1:2512922-2512941 | MS.gene36241:intron | 40.0% |
| !! | ATCATACTGAGGAGCATTCT+AGG | + | chr2.1:2514413-2514432 | None:intergenic | 40.0% |
| !! | TCATACTGAGGAGCATTCTA+GGG | + | chr2.1:2514412-2514431 | None:intergenic | 40.0% |
| !! | TGCTTGTTATCACGTTGGAT+AGG | - | chr2.1:2513054-2513073 | MS.gene36241:intron | 40.0% |
| !!! | TTTTAGAGTGGGAGATAACC+TGG | + | chr2.1:2512377-2512396 | None:intergenic | 40.0% |
| AAGCCTGATAAGTCGAAGTG+TGG | + | chr2.1:2515110-2515129 | None:intergenic | 45.0% | |
| AAGGCAGCAGAATCATACTG+AGG | + | chr2.1:2514424-2514443 | None:intergenic | 45.0% | |
| AATATAATCATGCGGGGGGA+AGG | - | chr2.1:2514537-2514556 | MS.gene36241:intron | 45.0% | |
| AATGCCGATGCCAACTATCT+AGG | - | chr2.1:2513964-2513983 | MS.gene36241:intron | 45.0% | |
| ACACCACACTTCGACTTATC+AGG | - | chr2.1:2515104-2515123 | MS.gene36241:intron | 45.0% | |
| ACATTTATCACCAGGTCACC+TGG | + | chr2.1:2514255-2514274 | None:intergenic | 45.0% | |
| ACCGCTCAAATATGGACATG+AGG | - | chr2.1:2514085-2514104 | MS.gene36241:intron | 45.0% | |
| ACTTATGAAGCAGAGACACG+GGG | - | chr2.1:2511312-2511331 | MS.gene36241:intron | 45.0% | |
| AGAGGGAGTGAAGCAAGTTT+AGG | - | chr2.1:2515701-2515720 | MS.gene36241:intron | 45.0% | |
| AGCTATGCACCGCTCAAATA+TGG | - | chr2.1:2514077-2514096 | MS.gene36241:intron | 45.0% | |
| ATACTGGTGGGACATCCTTT+AGG | + | chr2.1:2513809-2513828 | None:intergenic | 45.0% | |
| ATCTTGTCCCCTTGCACAAA+AGG | - | chr2.1:2514190-2514209 | MS.gene36241:intron | 45.0% | |
| ATGCCGATGCCAACTATCTA+GGG | - | chr2.1:2513965-2513984 | MS.gene36241:intron | 45.0% | |
| CACTTATGAAGCAGAGACAC+GGG | - | chr2.1:2511311-2511330 | MS.gene36241:intron | 45.0% | |
| CATATCACTTAGGCCCTGTT+TGG | - | chr2.1:2511463-2511482 | MS.gene36241:CDS | 45.0% | |
| CATTTATCACCAGGTCACCT+GGG | + | chr2.1:2514254-2514273 | None:intergenic | 45.0% | |
| CGTGCTCGACAGATTTACTT+TGG | + | chr2.1:2512412-2512431 | None:intergenic | 45.0% | |
| CTACCCAGACATTTATCACC+AGG | + | chr2.1:2514263-2514282 | None:intergenic | 45.0% | |
| GAAATGTGTTCAGGCCCTAA+AGG | - | chr2.1:2513791-2513810 | MS.gene36241:intron | 45.0% | |
| GAAGGCAGGACAGTAATATG+AGG | + | chr2.1:2511895-2511914 | None:intergenic | 45.0% | |
| GGCCCATGTGTTTAATGCAA+TGG | - | chr2.1:2511715-2511734 | MS.gene36241:intron | 45.0% | |
| GTATGGGAGATGCAACTTGA+CGG | + | chr2.1:2515751-2515770 | None:intergenic | 45.0% | |
| GTGACCTGGTGATAAATGTC+TGG | - | chr2.1:2514256-2514275 | MS.gene36241:intron | 45.0% | |
| GTTCTCACAACTGCTTAAGC+CGG | - | chr2.1:2511662-2511681 | MS.gene36241:CDS | 45.0% | |
| TACTGGTGGGACATCCTTTA+GGG | + | chr2.1:2513808-2513827 | None:intergenic | 45.0% | |
| TATGGGAGATGCAACTTGAC+GGG | + | chr2.1:2515750-2515769 | None:intergenic | 45.0% | |
| TCTGCTTTCCATCAGATGAC+TGG | + | chr2.1:2513383-2513402 | None:intergenic | 45.0% | |
| TCTTCTTCTTGGCGATATCC+AGG | - | chr2.1:2510952-2510971 | MS.gene36241:CDS | 45.0% | |
| TCTTGTCCCCTTGCACAAAA+GGG | - | chr2.1:2514191-2514210 | MS.gene36241:intron | 45.0% | |
| TGGCATGTTGACACAAGTAG+TGG | - | chr2.1:2511343-2511362 | MS.gene36241:intron | 45.0% | |
| TTCGCCGCTATCATCATACA+AGG | - | chr2.1:2514845-2514864 | MS.gene36241:CDS | 45.0% | |
| ! | GGAGTGTGACTGCATTGATA+TGG | - | chr2.1:2511106-2511125 | MS.gene36241:intron | 45.0% |
| ! | GTAATTTTTCCTAGGGTGGG+GGG | - | chr2.1:2513911-2513930 | MS.gene36241:intron | 45.0% |
| ! | TAAACTTGCTTCACTCCCTC+TGG | + | chr2.1:2515702-2515721 | None:intergenic | 45.0% |
| ! | TCAAAGAGTGTAGCTAGTCC+TGG | - | chr2.1:2515830-2515849 | MS.gene36241:CDS | 45.0% |
| ! | TTTTGTAGATGTGCGGACTC+AGG | - | chr2.1:2513171-2513190 | MS.gene36241:intron | 45.0% |
| !! | ATGATGATAGCGGCGAATCA+AGG | + | chr2.1:2514842-2514861 | None:intergenic | 45.0% |
| !! | CAGCATGCTTGTTATCACGT+TGG | - | chr2.1:2513049-2513068 | MS.gene36241:intron | 45.0% |
| !! | CATTGCAGTTGATGATCCCA+TGG | - | chr2.1:2514032-2514051 | MS.gene36241:intron | 45.0% |
| !! | GATTTGTGGAGAAGTGTCTG+AGG | + | chr2.1:2512665-2512684 | None:intergenic | 45.0% |
| !! | TAGATAGTTGGCATCGGCAT+TGG | + | chr2.1:2513965-2513984 | None:intergenic | 45.0% |
| !! | TCTTGAAGTGCGTTGATTGC+AGG | + | chr2.1:2515257-2515276 | None:intergenic | 45.0% |
| !! | AAAAAAATAAAGAAAAAATT+GGG | + | chr2.1:2510989-2511008 | None:intergenic | 5.0% |
| AAGGATGGCAGCACATGAAG+GGG | + | chr2.1:2514807-2514826 | None:intergenic | 50.0% | |
| AATCACCAGTGTCCTGCTCT+GGG | + | chr2.1:2513527-2513546 | None:intergenic | 50.0% | |
| ACAAGGATGGCAGCACATGA+AGG | + | chr2.1:2514809-2514828 | None:intergenic | 50.0% | |
| ACACATGGGCCTGTTTGGAT+TGG | + | chr2.1:2511706-2511725 | None:intergenic | 50.0% | |
| ACATACCGACATGTGAAGGC+AGG | + | chr2.1:2511909-2511928 | None:intergenic | 50.0% | |
| ACTGTCCTGCCTTCACATGT+CGG | - | chr2.1:2511901-2511920 | MS.gene36241:CDS | 50.0% | |
| ACTTGAGCACATGCCCTACA+TGG | - | chr2.1:2512731-2512750 | MS.gene36241:CDS | 50.0% | |
| ATGGGAGATGCAACTTGACG+GGG | + | chr2.1:2515749-2515768 | None:intergenic | 50.0% | |
| CAAGGATGGCAGCACATGAA+GGG | + | chr2.1:2514808-2514827 | None:intergenic | 50.0% | |
| CTCTGCGAGTTTCTTTGACG+AGG | + | chr2.1:2515791-2515810 | None:intergenic | 50.0% | |
| GAGTGAAGAAGCCAAGAGTC+TGG | - | chr2.1:2515658-2515677 | MS.gene36241:intron | 50.0% | |
| GCTCCCTAGATAGTTGGCAT+CGG | + | chr2.1:2513971-2513990 | None:intergenic | 50.0% | |
| GGAAGAACAACGAGGGTGAT+AGG | - | chr2.1:2511853-2511872 | MS.gene36241:CDS | 50.0% | |
| GGGGGAGATCTTCAGAATTG+GGG | - | chr2.1:2513929-2513948 | MS.gene36241:intron | 50.0% | |
| GGGGGGAGATCTTCAGAATT+GGG | - | chr2.1:2513928-2513947 | MS.gene36241:intron | 50.0% | |
| GTGTGGTGTATGAAAGCGAG+TGG | + | chr2.1:2515093-2515112 | None:intergenic | 50.0% | |
| GTTGCATCTCCCATACATCG+AGG | - | chr2.1:2515755-2515774 | MS.gene36241:intron | 50.0% | |
| TCACAACTGCTTAAGCCGGT+AGG | - | chr2.1:2511666-2511685 | MS.gene36241:intron | 50.0% | |
| TGAAGAAGCCAAGAGTCTGG+AGG | - | chr2.1:2515661-2515680 | MS.gene36241:intron | 50.0% | |
| TGGGGGGAGATCTTCAGAAT+TGG | - | chr2.1:2513927-2513946 | MS.gene36241:intron | 50.0% | |
| ! | ACTGGTGATTCGAGAAGTGC+TGG | - | chr2.1:2513537-2513556 | MS.gene36241:CDS | 50.0% |
| ! | ACTGTGCTCCCTTTTGTGCA+AGG | + | chr2.1:2514202-2514221 | None:intergenic | 50.0% |
| ! | CGTCGATCAGACCTTGTTTG+AGG | + | chr2.1:2511141-2511160 | None:intergenic | 50.0% |
| ! | CTGTGCTCCCTTTTGTGCAA+GGG | + | chr2.1:2514201-2514220 | None:intergenic | 50.0% |
| ! | TGTGCTCCCTTTTGTGCAAG+GGG | + | chr2.1:2514200-2514219 | None:intergenic | 50.0% |
| ! | TTGCACAAAAGGGAGCACAG+TGG | - | chr2.1:2514201-2514220 | MS.gene36241:intron | 50.0% |
| !! | GAGAAGTGCTGGTGCTAGTA+AGG | - | chr2.1:2513548-2513567 | MS.gene36241:CDS | 50.0% |
| AAAGCTCAACCCAGGTGACC+TGG | - | chr2.1:2514242-2514261 | MS.gene36241:intron | 55.0% | |
| ACGGGGAGAAGCAACTTGAC+GGG | + | chr2.1:2515732-2515751 | None:intergenic | 55.0% | |
| AGAAGCCAAGAGTCTGGAGG+CGG | - | chr2.1:2515664-2515683 | MS.gene36241:intron | 55.0% | |
| CAACACGTGTCTAACACCGC+AGG | + | chr2.1:2511402-2511421 | None:intergenic | 55.0% | |
| GAACAACGAGGGTGATAGGC+TGG | - | chr2.1:2511857-2511876 | MS.gene36241:CDS | 55.0% | |
| GAAGCAGCAGCCAACTGTTC+AGG | + | chr2.1:2511186-2511205 | None:intergenic | 55.0% | |
| GAATCACCAGTGTCCTGCTC+TGG | + | chr2.1:2513528-2513547 | None:intergenic | 55.0% | |
| GACGGGGAGAAGCAACTTGA+CGG | + | chr2.1:2515733-2515752 | None:intergenic | 55.0% | |
| GGAACAGTGGAACTGTGCCA+AGG | + | chr2.1:2514462-2514481 | None:intergenic | 55.0% | |
| GGGGTGCATCTCCTCAAACA+AGG | - | chr2.1:2511127-2511146 | MS.gene36241:intron | 55.0% | |
| GTGTAGCTAGTCCTGGTAGC+CGG | - | chr2.1:2515837-2515856 | MS.gene36241:CDS | 55.0% | |
| ! | CTGCGGTGTTAGACACGTGT+TGG | - | chr2.1:2511400-2511419 | MS.gene36241:intron | 55.0% |
| CAAGGGAGATAGCCCAGAGC+AGG | - | chr2.1:2513512-2513531 | MS.gene36241:CDS | 60.0% | |
| CCTGGTAGCCGGAGCAGAAA+AGG | - | chr2.1:2515848-2515867 | MS.gene36241:CDS | 60.0% | |
| CGGGGAGAAGCAACTTGACG+GGG | + | chr2.1:2515731-2515750 | None:intergenic | 60.0% | |
| GATAGCCCAGAGCAGGACAC+TGG | - | chr2.1:2513519-2513538 | MS.gene36241:CDS | 60.0% | |
| TGAAGATCTCCCCCCACCCT+AGG | + | chr2.1:2513923-2513942 | None:intergenic | 60.0% | |
| ! | CCTTTTCTGCTCCGGCTACC+AGG | + | chr2.1:2515851-2515870 | None:intergenic | 60.0% |
| !! | CGGAGGCATCTACGTCCAGA+GGG | - | chr2.1:2515684-2515703 | MS.gene36241:intron | 60.0% |
| !! | TGCGGGGGGAAGGTATTGTG+TGG | - | chr2.1:2514547-2514566 | MS.gene36241:intron | 60.0% |
| AGAGACACGGGGCACGACAC+TGG | - | chr2.1:2511323-2511342 | MS.gene36241:intron | 65.0% | |
| AGCCAAGAGTCTGGAGGCGG+AGG | - | chr2.1:2515667-2515686 | MS.gene36241:intron | 65.0% | |
| TGCCTCCGCCTCCAGACTCT+TGG | + | chr2.1:2515672-2515691 | None:intergenic | 65.0% | |
| !! | GCGGAGGCATCTACGTCCAG+AGG | - | chr2.1:2515683-2515702 | MS.gene36241:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 2510884 | 2515874 | 2510884 | ID=MS.gene36241 |
| chr2.1 | mRNA | 2510884 | 2515874 | 2510884 | ID=MS.gene36241.t1;Parent=MS.gene36241 |
| chr2.1 | exon | 2515785 | 2515874 | 2515785 | ID=MS.gene36241.t1.exon1;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2515785 | 2515874 | 2515785 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2515519 | 2515665 | 2515519 | ID=MS.gene36241.t1.exon2;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2515519 | 2515665 | 2515519 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2514836 | 2514926 | 2514836 | ID=MS.gene36241.t1.exon3;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2514836 | 2514926 | 2514836 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2513494 | 2513579 | 2513494 | ID=MS.gene36241.t1.exon4;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2513494 | 2513579 | 2513494 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2513189 | 2513404 | 2513189 | ID=MS.gene36241.t1.exon5;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2513189 | 2513404 | 2513189 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2512652 | 2512833 | 2512652 | ID=MS.gene36241.t1.exon6;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2512652 | 2512833 | 2512652 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2511824 | 2511982 | 2511824 | ID=MS.gene36241.t1.exon7;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2511824 | 2511982 | 2511824 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2511604 | 2511684 | 2511604 | ID=MS.gene36241.t1.exon8;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2511604 | 2511684 | 2511604 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2511457 | 2511511 | 2511457 | ID=MS.gene36241.t1.exon9;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2511457 | 2511511 | 2511457 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| chr2.1 | exon | 2510884 | 2511111 | 2510884 | ID=MS.gene36241.t1.exon10;Parent=MS.gene36241.t1 |
| chr2.1 | CDS | 2510884 | 2511111 | 2510884 | ID=cds.MS.gene36241.t1;Parent=MS.gene36241.t1 |
| Gene Sequence |
| Protein sequence |
