Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36577.t1 | XP_013444242.1 | 90.5 | 729 | 69 | 0 | 1 | 729 | 1 | 729 | 0.00E+00 | 1265.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36577.t1 | Q657D6 | 29.3 | 767 | 457 | 27 | 6 | 728 | 13 | 738 | 3.6e-52 | 208.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36577.t1 | A0A072TL88 | 90.5 | 729 | 69 | 0 | 1 | 729 | 1 | 729 | 0.0e+00 | 1265.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050444 | MS.gene36577 | 0.808024 | 3.79E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene36577 | 0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene36577 | 0.809245 | 2.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36577.t1 | MTR_8g015480 | 95.473 | 729 | 33 | 0 | 1 | 729 | 1 | 729 | 0.0 | 1417 |
| MS.gene36577.t1 | MTR_3g103970 | 39.098 | 399 | 195 | 11 | 349 | 728 | 314 | 683 | 2.54e-62 | 221 |
| MS.gene36577.t1 | MTR_3g103970 | 73.469 | 49 | 13 | 0 | 1 | 49 | 1 | 49 | 9.50e-16 | 81.6 |
| MS.gene36577.t1 | MTR_1g016920 | 35.990 | 414 | 212 | 16 | 336 | 728 | 129 | 510 | 1.41e-46 | 174 |
| MS.gene36577.t1 | MTR_1g016920 | 35.990 | 414 | 212 | 16 | 336 | 728 | 268 | 649 | 8.40e-46 | 174 |
| MS.gene36577.t1 | MTR_1g016920 | 72.340 | 47 | 10 | 2 | 2 | 47 | 5 | 49 | 5.58e-13 | 72.8 |
| MS.gene36577.t1 | MTR_1g016920 | 33.911 | 404 | 198 | 15 | 336 | 728 | 129 | 474 | 5.03e-41 | 157 |
| MS.gene36577.t1 | MTR_1g016920 | 33.911 | 404 | 198 | 15 | 336 | 728 | 268 | 613 | 2.10e-40 | 157 |
| MS.gene36577.t1 | MTR_1g016920 | 69.388 | 49 | 12 | 2 | 2 | 49 | 5 | 51 | 6.16e-13 | 72.8 |
| MS.gene36577.t1 | MTR_8g015800 | 57.317 | 82 | 28 | 2 | 632 | 713 | 5 | 79 | 1.68e-20 | 87.0 |
| MS.gene36577.t1 | MTR_7g016450 | 72.131 | 61 | 17 | 0 | 436 | 496 | 50 | 110 | 1.06e-19 | 85.5 |
| MS.gene36577.t1 | MTR_8g015470 | 83.721 | 43 | 7 | 0 | 1 | 43 | 32 | 74 | 1.63e-18 | 81.3 |
| MS.gene36577.t1 | MTR_8g015700 | 41.748 | 103 | 17 | 1 | 415 | 517 | 1 | 60 | 3.18e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36577.t1 | AT3G21320 | 33.588 | 393 | 178 | 12 | 337 | 728 | 223 | 533 | 9.86e-42 | 160 |
| MS.gene36577.t1 | AT2G25930 | 41.969 | 193 | 84 | 6 | 349 | 530 | 314 | 489 | 1.99e-32 | 134 |
| MS.gene36577.t1 | AT2G25930 | 70.370 | 54 | 16 | 0 | 1 | 54 | 1 | 54 | 1.56e-16 | 84.3 |
Find 137 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGACTCACTTGCTGATTT+TGG | 0.081692 | 8.4:+75931179 | None:intergenic |
| AATTATGGCAATCATCATTT+AGG | 0.100912 | 8.4:-75931878 | MS.gene36577:CDS |
| TTGCGGACAAAATCAATTTA+AGG | 0.138535 | 8.4:-75933845 | MS.gene36577:CDS |
| TAAATAATCGTGTTGAATTT+TGG | 0.172071 | 8.4:+75934331 | None:intergenic |
| GTTAATCTTTCTAGAATTAT+AGG | 0.175238 | 8.4:+75934412 | None:intergenic |
| CAAAAGATTCGGCTCCTTTC+CGG | 0.186551 | 8.4:-75931593 | MS.gene36577:CDS |
| AATAATCAGCTTTCAAATTA+TGG | 0.193309 | 8.4:-75931893 | MS.gene36577:CDS |
| AAACCTCTTCACTCATTAAA+TGG | 0.208223 | 8.4:-75934038 | MS.gene36577:CDS |
| TTATTCCTTGGAGGTGCTTT+TGG | 0.238890 | 8.4:+75935235 | None:intergenic |
| AAAGTCAGATTGTAACTTAT+TGG | 0.265253 | 8.4:+75932045 | None:intergenic |
| TTGTGCTGATTTCAGTTCTA+TGG | 0.271781 | 8.4:+75934124 | None:intergenic |
| CATCTTTATGCTCTTTCATT+AGG | 0.275651 | 8.4:+75934090 | None:intergenic |
| GAACTGAAATCAGCACAATA+TGG | 0.287107 | 8.4:-75934119 | MS.gene36577:CDS |
| CTCCCTTGATTGAAGCTCAT+TGG | 0.290810 | 8.4:+75931659 | None:intergenic |
| GACGATGTCGTAGGACTTAT+AGG | 0.304496 | 8.4:-75933642 | MS.gene36577:CDS |
| TGAGTTGCATAGACTTATAA+AGG | 0.318584 | 8.4:-75932245 | MS.gene36577:intron |
| GATTTCAGTTCTATGGTTCC+AGG | 0.329217 | 8.4:+75934131 | None:intergenic |
| CTCGGAAGTAGTGGCCTTCT+CGG | 0.331350 | 8.4:+75931979 | None:intergenic |
| GTCATGATGCCGCCAGCATT+TGG | 0.332846 | 8.4:+75931704 | None:intergenic |
| ATTATGGCAATCATCATTTA+GGG | 0.333611 | 8.4:-75931877 | MS.gene36577:CDS |
| CATTGGTTTGGTGGTGGTGG+AGG | 0.338285 | 8.4:+75931791 | None:intergenic |
| TGCGGACAAAATCAATTTAA+GGG | 0.338609 | 8.4:-75933844 | MS.gene36577:CDS |
| TTCCGTTGGCACCGACGTTT+TGG | 0.341515 | 8.4:-75931277 | MS.gene36577:CDS |
| TTGTATTGATTTGAATATCT+TGG | 0.349172 | 8.4:+75931154 | None:intergenic |
| TTGGAGGAGGATGTTTCTAT+TGG | 0.366194 | 8.4:+75932064 | None:intergenic |
| GGCATCATGACACCGTTATA+CGG | 0.367402 | 8.4:-75931692 | MS.gene36577:CDS |
| AGCACCTCCAAGGAATAAAA+TGG | 0.370824 | 8.4:-75935230 | MS.gene36577:CDS |
| GACAATGCTTGGAGAGTGTT+TGG | 0.375029 | 8.4:+75931817 | None:intergenic |
| TCCAGCTCAGAATGTAGATT+TGG | 0.376287 | 8.4:-75933681 | MS.gene36577:CDS |
| AATTCTCTGAAAACACTTGA+TGG | 0.378584 | 8.4:-75934293 | MS.gene36577:CDS |
| GGAACTGTACAATTTCTTAG+AGG | 0.379244 | 8.4:+75935136 | None:intergenic |
| ATCTTTAATCGATGAGTTTG+AGG | 0.386250 | 8.4:+75933992 | None:intergenic |
| GGAGGGCATGGTCCAATGAT+TGG | 0.389281 | 8.4:+75931725 | None:intergenic |
| TTACTCTTGAGTGATGTTCC+TGG | 0.400202 | 8.4:+75931222 | None:intergenic |
| GAACAAATGGCACAATCTAA+TGG | 0.402223 | 8.4:-75931497 | MS.gene36577:CDS |
| AGATGGACTTTGGTACAATA+TGG | 0.411206 | 8.4:+75931436 | None:intergenic |
| TTCTGAGCTGGATTTATTCA+AGG | 0.414643 | 8.4:+75933692 | None:intergenic |
| GATTAACTCAACCAAGTTGA+TGG | 0.415492 | 8.4:-75934396 | MS.gene36577:CDS |
| GAGGAGGATGTTTCTATTGG+TGG | 0.417064 | 8.4:+75932067 | None:intergenic |
| TTATCTTCCAATGATTGATA+AGG | 0.419667 | 8.4:+75931368 | None:intergenic |
| AGCTTCTTCTGTTGAACAAA+TGG | 0.420994 | 8.4:-75931510 | MS.gene36577:CDS |
| CAAACTCATCGATTAAAGAT+AGG | 0.423296 | 8.4:-75933989 | MS.gene36577:CDS |
| AAGTCTAAATTCATTTAGAA+AGG | 0.432222 | 8.4:-75934165 | MS.gene36577:CDS |
| CTTGTATATAAGCCAATCAT+TGG | 0.432861 | 8.4:-75931737 | MS.gene36577:CDS |
| AACCATTGGTTTGGTGGTGG+TGG | 0.433826 | 8.4:+75931788 | None:intergenic |
| ATAAGTCCTACGACATCGTC+AGG | 0.442802 | 8.4:+75933645 | None:intergenic |
| AGGGAGCAAAGATGTTGCTT+TGG | 0.442973 | 8.4:-75931642 | MS.gene36577:CDS |
| CAATTGTGGTAATGATGAAC+CGG | 0.446932 | 8.4:+75931574 | None:intergenic |
| AACTGAAATCAGCACAATAT+GGG | 0.453932 | 8.4:-75934118 | MS.gene36577:CDS |
| ACAGGAACTAACCATTGGTT+TGG | 0.456496 | 8.4:+75931779 | None:intergenic |
| ATCTGAGTGGACATGTTAGA+TGG | 0.457018 | 8.4:+75931419 | None:intergenic |
| TTGCTTATATTGTTGACAAA+AGG | 0.457324 | 8.4:+75931920 | None:intergenic |
| TGTTCTGGTGAGTTAGAAAT+CGG | 0.463956 | 8.4:-75933780 | MS.gene36577:CDS |
| CAGGTGCAAAGATTAATTGC+TGG | 0.467595 | 8.4:-75932133 | MS.gene36577:CDS |
| TCATCACTCGAGTCGCGATC+TGG | 0.473501 | 8.4:+75931248 | None:intergenic |
| TGAACTTCCTTTGTTTCCGT+TGG | 0.475130 | 8.4:-75931291 | MS.gene36577:CDS |
| GGAACTAACCATTGGTTTGG+TGG | 0.475844 | 8.4:+75931782 | None:intergenic |
| CTCAGAATGTAGATTTGGTA+TGG | 0.477158 | 8.4:-75933676 | MS.gene36577:CDS |
| AGATAAGTCCAATGTTTCCT+AGG | 0.478791 | 8.4:-75935288 | MS.gene36577:CDS |
| ATTGGTTTGGTGGTGGTGGA+GGG | 0.489254 | 8.4:+75931792 | None:intergenic |
| GGAAAAGGAATAGGATGAAA+GGG | 0.500824 | 8.4:-75935330 | None:intergenic |
| GGACCATGCCCTCCAAATGC+TGG | 0.503398 | 8.4:-75931716 | MS.gene36577:CDS |
| CACTCAGATAAGTCATGTAA+TGG | 0.505804 | 8.4:-75931405 | MS.gene36577:CDS |
| TCAAATCAATACAAGAAGAA+AGG | 0.508378 | 8.4:-75931145 | MS.gene36577:CDS |
| GACCAAAACGTCGGTGCCAA+CGG | 0.510563 | 8.4:+75931275 | None:intergenic |
| GCTTGGAGAGTGTTTGGCAT+TGG | 0.511051 | 8.4:+75931823 | None:intergenic |
| CCGCCAGCATTTGGAGGGCA+TGG | 0.511195 | 8.4:+75931713 | None:intergenic |
| ATGAAAGGGGCAATTGATGA+GGG | 0.519543 | 8.4:-75935316 | MS.gene36577:CDS |
| AAACCATTTAATGAGTGAAG+AGG | 0.525892 | 8.4:+75934035 | None:intergenic |
| CATGTTAAAGATGCAGAGAA+AGG | 0.525917 | 8.4:-75935262 | MS.gene36577:CDS |
| GTCATGACTCGCCATCAACT+TGG | 0.526256 | 8.4:+75934385 | None:intergenic |
| GATGTTGAAAACAATGCAGT+TGG | 0.526264 | 8.4:-75931956 | MS.gene36577:CDS |
| CCTTCAGATGGAGACATGAC+AGG | 0.527768 | 8.4:+75931761 | None:intergenic |
| AGATAGAACAGAAGATGCAT+TGG | 0.527977 | 8.4:+75934448 | None:intergenic |
| GTCAGATTGTAACTTATTGG+AGG | 0.529126 | 8.4:+75932048 | None:intergenic |
| ACACCGTTATACGGCGGTTG+CGG | 0.531143 | 8.4:-75931683 | MS.gene36577:CDS |
| AGGGGCAATTGATGAGGGAA+AGG | 0.532495 | 8.4:-75935311 | MS.gene36577:CDS |
| GGTGGAGGGTAGACAATGCT+TGG | 0.536767 | 8.4:+75931806 | None:intergenic |
| GGACCGCAACCGCCGTATAA+CGG | 0.538073 | 8.4:+75931680 | None:intergenic |
| ACATGCAACCTAGGAAACAT+TGG | 0.538119 | 8.4:+75935280 | None:intergenic |
| GTCGGTGCCAACGGAAACAA+AGG | 0.540047 | 8.4:+75931284 | None:intergenic |
| GTCCAATGAGCTTCAATCAA+GGG | 0.540098 | 8.4:-75931661 | MS.gene36577:CDS |
| ATGATGCCGCCAGCATTTGG+AGG | 0.540356 | 8.4:+75931707 | None:intergenic |
| TGAAAACTTGTAGTAAGAGA+TGG | 0.542446 | 8.4:+75931617 | None:intergenic |
| CCTGTCATGTCTCCATCTGA+AGG | 0.543651 | 8.4:-75931761 | MS.gene36577:CDS |
| CCTCACATGGCAAGAGAGAG+AGG | 0.543818 | 8.4:-75933749 | MS.gene36577:CDS |
| CTCACATGGCTTGATGTTGT+AGG | 0.545092 | 8.4:+75935115 | None:intergenic |
| ACTGTGTTGCAGCTTGGTTG+TGG | 0.548312 | 8.4:-75934494 | MS.gene36577:intron |
| GGTCCAATGAGCTTCAATCA+AGG | 0.550030 | 8.4:-75931662 | MS.gene36577:CDS |
| ACCAAATCTACATTCTGAGC+TGG | 0.550325 | 8.4:+75933680 | None:intergenic |
| GAGAGAGAGGAGTAAAGATG+AGG | 0.552298 | 8.4:-75933736 | MS.gene36577:CDS |
| TTATATTGTTGACAAAAGGA+AGG | 0.553495 | 8.4:+75931924 | None:intergenic |
| ATAGATCTATGCATGAATGA+TGG | 0.554260 | 8.4:+75931536 | None:intergenic |
| AGATTGTAACTTATTGGAGG+AGG | 0.555000 | 8.4:+75932051 | None:intergenic |
| TAAAGAACAAATATCGCTGA+AGG | 0.556742 | 8.4:-75933949 | MS.gene36577:CDS |
| TTCAACATCCTCGGAAGTAG+TGG | 0.557898 | 8.4:+75931970 | None:intergenic |
| GAACTGTACAATTTCTTAGA+GGG | 0.558318 | 8.4:+75935137 | None:intergenic |
| TATATTGTTGACAAAAGGAA+GGG | 0.559969 | 8.4:+75931925 | None:intergenic |
| GCATCTTTAACATGCAACCT+AGG | 0.561825 | 8.4:+75935271 | None:intergenic |
| TGGACATGTTAGATGGACTT+TGG | 0.571560 | 8.4:+75931426 | None:intergenic |
| GATGAAAGGGGCAATTGATG+AGG | 0.571714 | 8.4:-75935317 | MS.gene36577:CDS |
| GATAGCTTGAAAACATTGCA+AGG | 0.578106 | 8.4:-75933903 | MS.gene36577:CDS |
| CCTCTCTCTCTTGCCATGTG+AGG | 0.581603 | 8.4:+75933749 | None:intergenic |
| AAAACATTGCAAGGTAGCAA+TGG | 0.584093 | 8.4:-75933894 | MS.gene36577:CDS |
| CTCCACCACCACCAAACCAA+TGG | 0.587899 | 8.4:-75931790 | MS.gene36577:CDS |
| ACTAACCATTGGTTTGGTGG+TGG | 0.588211 | 8.4:+75931785 | None:intergenic |
| ACATGACAGGAACTAACCAT+TGG | 0.588830 | 8.4:+75931774 | None:intergenic |
| GGGAAAAGGAATAGGATGAA+AGG | 0.589801 | 8.4:-75935331 | None:intergenic |
| GTGAGTTAGAAATCGGTACA+AGG | 0.592224 | 8.4:-75933773 | MS.gene36577:CDS |
| AGAAAGGTGATGAACTCACC+TGG | 0.605551 | 8.4:-75934149 | MS.gene36577:CDS |
| CGACTCGAGTGATGAACACC+AGG | 0.605591 | 8.4:-75931240 | MS.gene36577:CDS |
| CAATTTAAGGGATCACTGCA+TGG | 0.610874 | 8.4:-75933832 | MS.gene36577:CDS |
| TGATGCCGCCAGCATTTGGA+GGG | 0.615550 | 8.4:+75931708 | None:intergenic |
| TTATCTTCAAACAATAGATG+TGG | 0.620025 | 8.4:+75932106 | None:intergenic |
| GAGGACCAAAAGCACCTCCA+AGG | 0.620299 | 8.4:-75935240 | MS.gene36577:CDS |
| TAAGTCCTACGACATCGTCA+GGG | 0.620829 | 8.4:+75933646 | None:intergenic |
| GATGATGCAAAACTTTGTGA+AGG | 0.622948 | 8.4:+75935184 | None:intergenic |
| ACTCGACAGCAAGTCCGAGA+AGG | 0.633266 | 8.4:-75931993 | MS.gene36577:CDS |
| ATTAAATGGTTTCGATGACA+CGG | 0.641685 | 8.4:-75934024 | MS.gene36577:CDS |
| GTTAAAGATGCAGAGAAAGG+AGG | 0.642654 | 8.4:-75935259 | MS.gene36577:CDS |
| GTGGTAATGATGAACCGGAA+AGG | 0.644906 | 8.4:+75931579 | None:intergenic |
| CGAGAAGGCCACTACTTCCG+AGG | 0.650322 | 8.4:-75931978 | MS.gene36577:CDS |
| ATCGGTACAAGGTCCTCACA+TGG | 0.650514 | 8.4:-75933762 | MS.gene36577:CDS |
| TATCTGCAGAGGCTAATGCA+AGG | 0.651421 | 8.4:+75931852 | None:intergenic |
| TTATATACAAGACCTTCAGA+TGG | 0.655581 | 8.4:+75931749 | None:intergenic |
| CCATGCCCTCCAAATGCTGG+CGG | 0.659409 | 8.4:-75931713 | MS.gene36577:CDS |
| ACACATGGTGGTAACAATTG+TGG | 0.665840 | 8.4:+75931560 | None:intergenic |
| ATGATGCAAAACTTTGTGAA+GGG | 0.667865 | 8.4:+75935185 | None:intergenic |
| TGACTTAGAGCACATGACAC+CGG | 0.669331 | 8.4:-75934366 | MS.gene36577:CDS |
| GAAAAGGAATAGGATGAAAG+GGG | 0.670384 | 8.4:-75935329 | None:intergenic |
| AAGTCCTACGACATCGTCAG+GGG | 0.680617 | 8.4:+75933647 | None:intergenic |
| ATCTCCCCTGACGATGTCGT+AGG | 0.687660 | 8.4:-75933651 | MS.gene36577:CDS |
| TGCATGAATGATGGAACACA+TGG | 0.718592 | 8.4:+75931545 | None:intergenic |
| ATGAATGATGGAACACATGG+TGG | 0.732037 | 8.4:+75931548 | None:intergenic |
| CATTACATGACTTATCTGAG+TGG | 0.751211 | 8.4:+75931406 | None:intergenic |
| TCTGGTGATGACCAAAACGT+CGG | 0.752940 | 8.4:+75931266 | None:intergenic |
| ATCATGACACCGTTATACGG+CGG | 0.764220 | 8.4:-75931689 | MS.gene36577:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAACATCATAACTAAAA+TGG | + | chr8.4:75931939-75931958 | None:intergenic | 15.0% |
| !!! | TTTTTCAATGTATATTTGTT+CGG | - | chr8.4:75931514-75931533 | MS.gene36577:CDS | 15.0% |
| !! | AAGTCTAAATTCATTTAGAA+AGG | - | chr8.4:75932287-75932306 | MS.gene36577:intron | 20.0% |
| !! | AATAATCAGCTTTCAAATTA+TGG | - | chr8.4:75934559-75934578 | MS.gene36577:intron | 20.0% |
| !! | GTCTATTAACATATAGTATA+AGG | + | chr8.4:75934237-75934256 | None:intergenic | 20.0% |
| !! | TTGTTCTAACAATATTTGTA+TGG | - | chr8.4:75931801-75931820 | MS.gene36577:CDS | 20.0% |
| !!! | ACTTTCGTATATAGAATTTT+CGG | - | chr8.4:75931433-75931452 | MS.gene36577:CDS | 20.0% |
| !!! | GTTAATCTTTCTAGAATTAT+AGG | + | chr8.4:75932043-75932062 | None:intergenic | 20.0% |
| !!! | TAAATAATCGTGTTGAATTT+TGG | + | chr8.4:75932124-75932143 | None:intergenic | 20.0% |
| !!! | TTATAGGTGAAAAACAATTT+TGG | - | chr8.4:75932826-75932845 | MS.gene36577:intron | 20.0% |
| !!! | TTGTATTGATTTGAATATCT+TGG | + | chr8.4:75935301-75935320 | None:intergenic | 20.0% |
| !!! | TTTTTCTCAATAGTTTTTCT+AGG | + | chr8.4:75933688-75933707 | None:intergenic | 20.0% |
| ! | AAAGTCAGATTGTAACTTAT+TGG | + | chr8.4:75934410-75934429 | None:intergenic | 25.0% |
| ! | AAATCTAGAGATTAATGAGT+TGG | - | chr8.4:75933705-75933724 | MS.gene36577:CDS | 25.0% |
| ! | AATTATGGCAATCATCATTT+AGG | - | chr8.4:75934574-75934593 | MS.gene36577:intron | 25.0% |
| ! | ACTACTTAACCTTTATCATT+TGG | - | chr8.4:75931891-75931910 | MS.gene36577:CDS | 25.0% |
| ! | ATAATTCAAACAATGACACT+TGG | - | chr8.4:75931860-75931879 | MS.gene36577:CDS | 25.0% |
| ! | ATAGTGCAGATAAATAAGAT+AGG | + | chr8.4:75932990-75933009 | None:intergenic | 25.0% |
| ! | ATCTAGTTAGATTTATGGTT+GGG | + | chr8.4:75934008-75934027 | None:intergenic | 25.0% |
| ! | ATCTTCTTTATTATGTGCAT+AGG | - | chr8.4:75933008-75933027 | MS.gene36577:intron | 25.0% |
| ! | ATTATGGCAATCATCATTTA+GGG | - | chr8.4:75934575-75934594 | MS.gene36577:intron | 25.0% |
| ! | CATACTTATGGTACAAAAAT+TGG | + | chr8.4:75931396-75931415 | None:intergenic | 25.0% |
| ! | GCAAAACATTTCTAACTTAA+AGG | - | chr8.4:75933210-75933229 | MS.gene36577:intron | 25.0% |
| ! | GGTTCAAAAGTAAAAAGATA+CGG | + | chr8.4:75931774-75931793 | None:intergenic | 25.0% |
| ! | TATATTGTTGACAAAAGGAA+GGG | + | chr8.4:75934530-75934549 | None:intergenic | 25.0% |
| ! | TCAAATCAATACAAGAAGAA+AGG | - | chr8.4:75935307-75935326 | MS.gene36577:CDS | 25.0% |
| ! | TTATATTGTTGACAAAAGGA+AGG | + | chr8.4:75934531-75934550 | None:intergenic | 25.0% |
| ! | TTATCTTCAAACAATAGATG+TGG | + | chr8.4:75934349-75934368 | None:intergenic | 25.0% |
| ! | TTATCTTCCAATGATTGATA+AGG | + | chr8.4:75935087-75935106 | None:intergenic | 25.0% |
| ! | TTCATGTACCAATTAATCTT+TGG | + | chr8.4:75933920-75933939 | None:intergenic | 25.0% |
| ! | TTGCTTATATTGTTGACAAA+AGG | + | chr8.4:75934535-75934554 | None:intergenic | 25.0% |
| !! | ACAAGAAGAAAGGAAATTTT+AGG | - | chr8.4:75935317-75935336 | MS.gene36577:CDS | 25.0% |
| !! | AGATCTTTTTGTAAGTTTTG+CGG | - | chr8.4:75933890-75933909 | MS.gene36577:CDS | 25.0% |
| !! | CAAGTTTTCATCAAAAGATT+CGG | - | chr8.4:75934848-75934867 | MS.gene36577:intron | 25.0% |
| !! | TTTTTCACCTTATCAATCAT+TGG | - | chr8.4:75935077-75935096 | MS.gene36577:intron | 25.0% |
| !!! | ATCTTTTTACTTTTGAACCA+GGG | - | chr8.4:75931775-75931794 | MS.gene36577:CDS | 25.0% |
| !!! | ATTTTGGTAATTTGTTTTGC+CGG | + | chr8.4:75932108-75932127 | None:intergenic | 25.0% |
| !!! | TATCTTTTTACTTTTGAACC+AGG | - | chr8.4:75931774-75931793 | MS.gene36577:CDS | 25.0% |
| !!! | TTTGTATTTTGCTACTTACA+TGG | - | chr8.4:75934128-75934147 | MS.gene36577:CDS | 25.0% |
| AAACCATTTAATGAGTGAAG+AGG | + | chr8.4:75932420-75932439 | None:intergenic | 30.0% | |
| AAACCTCTTCACTCATTAAA+TGG | - | chr8.4:75932414-75932433 | MS.gene36577:intron | 30.0% | |
| AACTGAAATCAGCACAATAT+GGG | - | chr8.4:75932334-75932353 | MS.gene36577:intron | 30.0% | |
| AACTTGCATTCCATATACTT+TGG | + | chr8.4:75933181-75933200 | None:intergenic | 30.0% | |
| AGAGATAAGACTCATACTTA+TGG | + | chr8.4:75931408-75931427 | None:intergenic | 30.0% | |
| AGTGATTTCCAAAAATGTTC+TGG | - | chr8.4:75932657-75932676 | MS.gene36577:intron | 30.0% | |
| ATAGATCTATGCATGAATGA+TGG | + | chr8.4:75934919-75934938 | None:intergenic | 30.0% | |
| ATCTTTAATCGATGAGTTTG+AGG | + | chr8.4:75932463-75932482 | None:intergenic | 30.0% | |
| ATGATATACGACAGAACATT+AGG | - | chr8.4:75933736-75933755 | MS.gene36577:CDS | 30.0% | |
| ATGATGCAAAACTTTGTGAA+GGG | + | chr8.4:75931270-75931289 | None:intergenic | 30.0% | |
| ATTAAATGGTTTCGATGACA+CGG | - | chr8.4:75932428-75932447 | MS.gene36577:intron | 30.0% | |
| ATTAGAGAGAGAGTAAAAGA+TGG | - | chr8.4:75933553-75933572 | MS.gene36577:intron | 30.0% | |
| ATTATGTGCATAGGACTTAT+AGG | - | chr8.4:75933017-75933036 | MS.gene36577:intron | 30.0% | |
| CATCTTTATGCTCTTTCATT+AGG | + | chr8.4:75932365-75932384 | None:intergenic | 30.0% | |
| CTAAACCATATCCTAAAAAC+AGG | - | chr8.4:75934300-75934319 | MS.gene36577:CDS | 30.0% | |
| CTTGTATATAAGCCAATCAT+TGG | - | chr8.4:75934715-75934734 | MS.gene36577:intron | 30.0% | |
| GAACTGTACAATTTCTTAGA+GGG | + | chr8.4:75931318-75931337 | None:intergenic | 30.0% | |
| GAATTATGTCAAAAAAGTCC+TGG | + | chr8.4:75931847-75931866 | None:intergenic | 30.0% | |
| GACATGTAGATTCTTTAGTA+AGG | - | chr8.4:75933615-75933634 | MS.gene36577:CDS | 30.0% | |
| GATCTAGTTAGATTTATGGT+TGG | + | chr8.4:75934009-75934028 | None:intergenic | 30.0% | |
| GGACTTAAAGTTAGTGTAAT+AGG | + | chr8.4:75933987-75934006 | None:intergenic | 30.0% | |
| GGATGATCTAGTTAGATTTA+TGG | + | chr8.4:75934013-75934032 | None:intergenic | 30.0% | |
| GTAAACTATTCAATTCAAGC+AGG | - | chr8.4:75933326-75933345 | MS.gene36577:intron | 30.0% | |
| GTAGAATCACCAAATGATAA+AGG | + | chr8.4:75931903-75931922 | None:intergenic | 30.0% | |
| TAAAGAACAAATATCGCTGA+AGG | - | chr8.4:75932503-75932522 | MS.gene36577:intron | 30.0% | |
| TAAATGGGAGATTATAGACT+TGG | - | chr8.4:75933110-75933129 | MS.gene36577:intron | 30.0% | |
| TAGAAGCAAACCAAAGTATA+TGG | - | chr8.4:75933168-75933187 | MS.gene36577:intron | 30.0% | |
| TAGTAGAACAGTACAAAATG+AGG | - | chr8.4:75933290-75933309 | MS.gene36577:intron | 30.0% | |
| TATTGTTAGAACAATAACCC+TGG | + | chr8.4:75931795-75931814 | None:intergenic | 30.0% | |
| TCACACATTTCAAATATCCT+AGG | - | chr8.4:75933263-75933282 | MS.gene36577:intron | 30.0% | |
| TGAAAACTTGTAGTAAGAGA+TGG | + | chr8.4:75934838-75934857 | None:intergenic | 30.0% | |
| TGAGTTGCATAGACTTATAA+AGG | - | chr8.4:75934207-75934226 | MS.gene36577:CDS | 30.0% | |
| TGCGGACAAAATCAATTTAA+GGG | - | chr8.4:75932608-75932627 | MS.gene36577:intron | 30.0% | |
| TTAACTGTTATGTACCCTTT+GGG | - | chr8.4:75931549-75931568 | MS.gene36577:CDS | 30.0% | |
| TTATATACAAGACCTTCAGA+TGG | + | chr8.4:75934706-75934725 | None:intergenic | 30.0% | |
| TTGATATGTCAACATATACG+TGG | + | chr8.4:75933866-75933885 | None:intergenic | 30.0% | |
| TTGCGGACAAAATCAATTTA+AGG | - | chr8.4:75932607-75932626 | MS.gene36577:intron | 30.0% | |
| ! | AATTCTCTGAAAACACTTGA+TGG | - | chr8.4:75932159-75932178 | MS.gene36577:intron | 30.0% |
| ! | CAAACTCATCGATTAAAGAT+AGG | - | chr8.4:75932463-75932482 | MS.gene36577:intron | 30.0% |
| ! | CATTTTGTACTGTTCTACTA+TGG | + | chr8.4:75933290-75933309 | None:intergenic | 30.0% |
| ! | GAAGATGCTTTTATAACTTC+TGG | - | chr8.4:75932183-75932202 | MS.gene36577:intron | 30.0% |
| ! | TAGTTATCGCAATATCGATT+TGG | + | chr8.4:75933835-75933854 | None:intergenic | 30.0% |
| ! | TCGTATATAGAATTTTCGGT+AGG | - | chr8.4:75931437-75931456 | MS.gene36577:CDS | 30.0% |
| ! | TTCATCTCTTTTCATTCTCT+TGG | + | chr8.4:75935145-75935164 | None:intergenic | 30.0% |
| !! | ATGCTACTTTATATCACATG+AGG | + | chr8.4:75933372-75933391 | None:intergenic | 30.0% |
| !! | TAATCTTTGCACCTGTTTTT+AGG | + | chr8.4:75934314-75934333 | None:intergenic | 30.0% |
| AAAACATTGCAAGGTAGCAA+TGG | - | chr8.4:75932558-75932577 | MS.gene36577:intron | 35.0% | |
| AAAGGGTAGTAAATCACTAG+AGG | - | chr8.4:75933652-75933671 | MS.gene36577:CDS | 35.0% | |
| AAGGAGAGCAGATAACATAA+AGG | - | chr8.4:75933634-75933653 | MS.gene36577:CDS | 35.0% | |
| ACTATTCAATTCAAGCAGGA+TGG | - | chr8.4:75933330-75933349 | MS.gene36577:intron | 35.0% | |
| AGATAAGTCCAATGTTTCCT+AGG | - | chr8.4:75931164-75931183 | MS.gene36577:CDS | 35.0% | |
| AGATAGAACAGAAGATGCAT+TGG | + | chr8.4:75932007-75932026 | None:intergenic | 35.0% | |
| AGATTGTAACTTATTGGAGG+AGG | + | chr8.4:75934404-75934423 | None:intergenic | 35.0% | |
| AGCTTCTTCTGTTGAACAAA+TGG | - | chr8.4:75934942-75934961 | MS.gene36577:intron | 35.0% | |
| AGGAGAGCAGATAACATAAA+GGG | - | chr8.4:75933635-75933654 | MS.gene36577:CDS | 35.0% | |
| CAATATTTGAACACCGAGTT+CGG | + | chr8.4:75931734-75931753 | None:intergenic | 35.0% | |
| CACTCAGATAAGTCATGTAA+TGG | - | chr8.4:75935047-75935066 | MS.gene36577:intron | 35.0% | |
| CATGTTAAAGATGCAGAGAA+AGG | - | chr8.4:75931190-75931209 | MS.gene36577:CDS | 35.0% | |
| CATTACATGACTTATCTGAG+TGG | + | chr8.4:75935049-75935068 | None:intergenic | 35.0% | |
| CTGTCGAGTTTAAAAACTGT+CGG | + | chr8.4:75934448-75934467 | None:intergenic | 35.0% | |
| GAAATGCAAGACTTCATGTA+AGG | + | chr8.4:75934037-75934056 | None:intergenic | 35.0% | |
| GAACAAATGGCACAATCTAA+TGG | - | chr8.4:75934955-75934974 | MS.gene36577:intron | 35.0% | |
| GAACTGAAATCAGCACAATA+TGG | - | chr8.4:75932333-75932352 | MS.gene36577:intron | 35.0% | |
| GATAGCTTGAAAACATTGCA+AGG | - | chr8.4:75932549-75932568 | MS.gene36577:intron | 35.0% | |
| GATGATGCAAAACTTTGTGA+AGG | + | chr8.4:75931271-75931290 | None:intergenic | 35.0% | |
| GATGTTGAAAACAATGCAGT+TGG | - | chr8.4:75934496-75934515 | MS.gene36577:intron | 35.0% | |
| GCATAGGTTGTTTGAATATG+TGG | - | chr8.4:75933586-75933605 | MS.gene36577:intron | 35.0% | |
| GGAACTGTACAATTTCTTAG+AGG | + | chr8.4:75931319-75931338 | None:intergenic | 35.0% | |
| GTAAGACCAACAATGTTGTA+CGG | - | chr8.4:75933424-75933443 | MS.gene36577:intron | 35.0% | |
| GTCAGATTGTAACTTATTGG+AGG | + | chr8.4:75934407-75934426 | None:intergenic | 35.0% | |
| GTTAACTGTTATGTACCCTT+TGG | - | chr8.4:75931548-75931567 | MS.gene36577:CDS | 35.0% | |
| TAAGACCAACAATGTTGTAC+GGG | - | chr8.4:75933425-75933444 | MS.gene36577:intron | 35.0% | |
| TGGAATGCAAGTTTAGCAAA+AGG | - | chr8.4:75933188-75933207 | MS.gene36577:intron | 35.0% | |
| TGTTCTGGTGAGTTAGAAAT+CGG | - | chr8.4:75932672-75932691 | MS.gene36577:intron | 35.0% | |
| TTCTGAGCTGGATTTATTCA+AGG | + | chr8.4:75932763-75932782 | None:intergenic | 35.0% | |
| ! | AGATGGACTTTGGTACAATA+TGG | + | chr8.4:75935019-75935038 | None:intergenic | 35.0% |
| ! | ATTGGAACTTTTATCTGCAG+AGG | + | chr8.4:75934614-75934633 | None:intergenic | 35.0% |
| ! | CAATTGTGGTAATGATGAAC+CGG | + | chr8.4:75934881-75934900 | None:intergenic | 35.0% |
| ! | CTAACTCACCAGAACATTTT+TGG | + | chr8.4:75932668-75932687 | None:intergenic | 35.0% |
| ! | CTCAGAATGTAGATTTGGTA+TGG | - | chr8.4:75932776-75932795 | MS.gene36577:intron | 35.0% |
| ! | GATTAACTCAACCAAGTTGA+TGG | - | chr8.4:75932056-75932075 | MS.gene36577:CDS | 35.0% |
| ! | GCAGATGAGTAGTGATTTTT+AGG | + | chr8.4:75934982-75935001 | None:intergenic | 35.0% |
| ! | GCGGTTTTCCAAAGATTAAT+TGG | - | chr8.4:75933909-75933928 | MS.gene36577:CDS | 35.0% |
| ! | GGATATTTGAAATGTGTGAC+AGG | + | chr8.4:75933262-75933281 | None:intergenic | 35.0% |
| ! | TATTTGAAATGTGTGACAGG+TGG | + | chr8.4:75933259-75933278 | None:intergenic | 35.0% |
| ! | TCACAAAGTTTTGCATCATC+AGG | - | chr8.4:75931271-75931290 | MS.gene36577:CDS | 35.0% |
| ! | TCACAGCCTAACAAACTTTT+GGG | + | chr8.4:75931580-75931599 | None:intergenic | 35.0% |
| ! | TCTCTTTTCATTCTCTTGGA+TGG | + | chr8.4:75935141-75935160 | None:intergenic | 35.0% |
| ! | TGAAGAACATGTAGCTTTTG+CGG | - | chr8.4:75932590-75932609 | MS.gene36577:intron | 35.0% |
| ! | TGCATTGTTTTCAACATCCT+CGG | + | chr8.4:75934494-75934513 | None:intergenic | 35.0% |
| !! | AGTAAAAGATGGTGGAAACT+CGG | - | chr8.4:75933564-75933583 | MS.gene36577:intron | 35.0% |
| !! | TAGAGAGCCATTTTATTCCT+TGG | + | chr8.4:75931232-75931251 | None:intergenic | 35.0% |
| !! | TTGTGCTGATTTCAGTTCTA+TGG | + | chr8.4:75932331-75932350 | None:intergenic | 35.0% |
| !! | TTGTTGGTCTTACAGTTGTA+CGG | + | chr8.4:75933417-75933436 | None:intergenic | 35.0% |
| !! | TTTTGGAAATCACTCATTGC+TGG | + | chr8.4:75932651-75932670 | None:intergenic | 35.0% |
| !!! | CTTGCTGATTTTGGATTATG+AGG | + | chr8.4:75935267-75935286 | None:intergenic | 35.0% |
| !!! | TTGCACCTGTTTTTAGGATA+TGG | + | chr8.4:75934308-75934327 | None:intergenic | 35.0% |
| AACTCTTGTGAGAATCAACC+AGG | - | chr8.4:75931826-75931845 | MS.gene36577:CDS | 40.0% | |
| ACACATGGTGGTAACAATTG+TGG | + | chr8.4:75934895-75934914 | None:intergenic | 40.0% | |
| ACATGACAGGAACTAACCAT+TGG | + | chr8.4:75934681-75934700 | None:intergenic | 40.0% | |
| ACATGCAACCTAGGAAACAT+TGG | + | chr8.4:75931175-75931194 | None:intergenic | 40.0% | |
| ACCAAATCTACATTCTGAGC+TGG | + | chr8.4:75932775-75932794 | None:intergenic | 40.0% | |
| AGACAATTCTTAGACGCGTA+TGG | - | chr8.4:75933133-75933152 | MS.gene36577:intron | 40.0% | |
| AGAGAGAGAGTAAAAGATGG+TGG | - | chr8.4:75933556-75933575 | MS.gene36577:intron | 40.0% | |
| AGATTGTTGTGTTGGATGTG+TGG | - | chr8.4:75933501-75933520 | MS.gene36577:intron | 40.0% | |
| AGCACCTCCAAGGAATAAAA+TGG | - | chr8.4:75931222-75931241 | MS.gene36577:CDS | 40.0% | |
| AGTTGAGGGAGGAACTAAAT+GGG | - | chr8.4:75933095-75933114 | MS.gene36577:intron | 40.0% | |
| ATCTGAGTGGACATGTTAGA+TGG | + | chr8.4:75935036-75935055 | None:intergenic | 40.0% | |
| ATGAAAGGGGCAATTGATGA+GGG | - | chr8.4:75931136-75931155 | MS.gene36577:CDS | 40.0% | |
| ATGCAAGACTTCATGTAAGG+AGG | + | chr8.4:75934034-75934053 | None:intergenic | 40.0% | |
| CAATTTAAGGGATCACTGCA+TGG | - | chr8.4:75932620-75932639 | MS.gene36577:intron | 40.0% | |
| CAGGTGCAAAGATTAATTGC+TGG | - | chr8.4:75934319-75934338 | MS.gene36577:CDS | 40.0% | |
| CAGTGATGAGATTGTTGTGT+TGG | - | chr8.4:75933493-75933512 | MS.gene36577:intron | 40.0% | |
| GAACTACTACATGACTCACA+TGG | + | chr8.4:75931354-75931373 | None:intergenic | 40.0% | |
| GAAGAAGATTCTCTGTTGAC+TGG | + | chr8.4:75934176-75934195 | None:intergenic | 40.0% | |
| GATTTCAGTTCTATGGTTCC+AGG | + | chr8.4:75932324-75932343 | None:intergenic | 40.0% | |
| GCATCTTTAACATGCAACCT+AGG | + | chr8.4:75931184-75931203 | None:intergenic | 40.0% | |
| GTCCAATGAGCTTCAATCAA+GGG | - | chr8.4:75934791-75934810 | MS.gene36577:intron | 40.0% | |
| GTGAGTTAGAAATCGGTACA+AGG | - | chr8.4:75932679-75932698 | MS.gene36577:intron | 40.0% | |
| GTTAAAGATGCAGAGAAAGG+AGG | - | chr8.4:75931193-75931212 | MS.gene36577:CDS | 40.0% | |
| GTTTATACTGTGTTGCAGCT+TGG | - | chr8.4:75931952-75931971 | MS.gene36577:CDS | 40.0% | |
| TACTGTTCTACTATGGACCT+AGG | + | chr8.4:75933283-75933302 | None:intergenic | 40.0% | |
| TCCAGCTCAGAATGTAGATT+TGG | - | chr8.4:75932771-75932790 | MS.gene36577:intron | 40.0% | |
| TCGAGTTTAAAAACTGTCGG+CGG | + | chr8.4:75934445-75934464 | None:intergenic | 40.0% | |
| TCTCGTTTGATCCATGTAAC+CGG | - | chr8.4:75933760-75933779 | MS.gene36577:CDS | 40.0% | |
| TTACTCTTGAGTGATGTTCC+TGG | + | chr8.4:75935233-75935252 | None:intergenic | 40.0% | |
| TTCAATTCAAGCAGGATGGT+AGG | - | chr8.4:75933334-75933353 | MS.gene36577:intron | 40.0% | |
| ! | ACAGGAACTAACCATTGGTT+TGG | + | chr8.4:75934676-75934695 | None:intergenic | 40.0% |
| ! | AGTTTTGCATCATCAGGATC+AGG | - | chr8.4:75931277-75931296 | MS.gene36577:CDS | 40.0% |
| ! | ATGAATGATGGAACACATGG+TGG | + | chr8.4:75934907-75934926 | None:intergenic | 40.0% |
| ! | GATGTGTGGACTATCAAGAT+AGG | - | chr8.4:75933515-75933534 | MS.gene36577:intron | 40.0% |
| ! | GCTACGCTTTATTCTCATGT+TGG | + | chr8.4:75933474-75933493 | None:intergenic | 40.0% |
| ! | GCTTGTCCCAAAAGTTTGTT+AGG | - | chr8.4:75931571-75931590 | MS.gene36577:CDS | 40.0% |
| ! | GTCACAGCCTAACAAACTTT+TGG | + | chr8.4:75931581-75931600 | None:intergenic | 40.0% |
| ! | TATCACATGAGGCACTTCTT+TGG | + | chr8.4:75933361-75933380 | None:intergenic | 40.0% |
| ! | TGAACTTCCTTTGTTTCCGT+TGG | - | chr8.4:75935161-75935180 | MS.gene36577:CDS | 40.0% |
| ! | TGCATGAATGATGGAACACA+TGG | + | chr8.4:75934910-75934929 | None:intergenic | 40.0% |
| ! | TGGACATGTTAGATGGACTT+TGG | + | chr8.4:75935029-75935048 | None:intergenic | 40.0% |
| ! | TTGGAGGAGGATGTTTCTAT+TGG | + | chr8.4:75934391-75934410 | None:intergenic | 40.0% |
| !! | AGAGCCATTTTATTCCTTGG+AGG | + | chr8.4:75931229-75931248 | None:intergenic | 40.0% |
| !! | GTAGGAGTATCAAGCTTGAT+AGG | - | chr8.4:75931455-75931474 | MS.gene36577:CDS | 40.0% |
| !!! | TTATTCCTTGGAGGTGCTTT+TGG | + | chr8.4:75931220-75931239 | None:intergenic | 40.0% |
| ACCAACAATGTTGTACGGGA+TGG | - | chr8.4:75933429-75933448 | MS.gene36577:intron | 45.0% | |
| ACTAAGTAGGACCGGTTACA+TGG | + | chr8.4:75933774-75933793 | None:intergenic | 45.0% | |
| AGAAAGGTGATGAACTCACC+TGG | - | chr8.4:75932303-75932322 | MS.gene36577:intron | 45.0% | |
| AGTACCTCATAATCGTACCG+CGG | + | chr8.4:75931614-75931633 | None:intergenic | 45.0% | |
| ATAAGTCCTACGACATCGTC+AGG | + | chr8.4:75932810-75932829 | None:intergenic | 45.0% | |
| ATCATGACACCGTTATACGG+CGG | - | chr8.4:75934763-75934782 | MS.gene36577:intron | 45.0% | |
| ATGTAACCGGTCCTACTTAG+TGG | - | chr8.4:75933773-75933792 | MS.gene36577:CDS | 45.0% | |
| CAAAAGATTCGGCTCCTTTC+CGG | - | chr8.4:75934859-75934878 | MS.gene36577:intron | 45.0% | |
| CACTGCTTTGGTACATGAAC+TGG | + | chr8.4:75933049-75933068 | None:intergenic | 45.0% | |
| CTCACATGGCTTGATGTTGT+AGG | + | chr8.4:75931340-75931359 | None:intergenic | 45.0% | |
| CTCCCTTGATTGAAGCTCAT+TGG | + | chr8.4:75934796-75934815 | None:intergenic | 45.0% | |
| CTCTGCTTAAGTGTCCTACT+TGG | - | chr8.4:75933070-75933089 | MS.gene36577:intron | 45.0% | |
| CTTAAGCAGAGTCACTGCTT+TGG | + | chr8.4:75933061-75933080 | None:intergenic | 45.0% | |
| CTTATCCCACTAAGTAGGAC+CGG | + | chr8.4:75933782-75933801 | None:intergenic | 45.0% | |
| GACGATGTCGTAGGACTTAT+AGG | - | chr8.4:75932810-75932829 | MS.gene36577:intron | 45.0% | |
| GAGAGAGAGGAGTAAAGATG+AGG | - | chr8.4:75932716-75932735 | MS.gene36577:intron | 45.0% | |
| GAGTTGAGGGAGGAACTAAA+TGG | - | chr8.4:75933094-75933113 | MS.gene36577:intron | 45.0% | |
| GGCATCATGACACCGTTATA+CGG | - | chr8.4:75934760-75934779 | MS.gene36577:intron | 45.0% | |
| GGTCCAATGAGCTTCAATCA+AGG | - | chr8.4:75934790-75934809 | MS.gene36577:intron | 45.0% | |
| GTCGGACACATAAGCACAAT+TGG | - | chr8.4:75931708-75931727 | MS.gene36577:CDS | 45.0% | |
| TAAGCACAATTGGCCGAACT+CGG | - | chr8.4:75931718-75931737 | MS.gene36577:CDS | 45.0% | |
| TAAGTCCTACGACATCGTCA+GGG | + | chr8.4:75932809-75932828 | None:intergenic | 45.0% | |
| TATCTGCAGAGGCTAATGCA+AGG | + | chr8.4:75934603-75934622 | None:intergenic | 45.0% | |
| TCCATCCCGTACAACATTGT+TGG | + | chr8.4:75933433-75933452 | None:intergenic | 45.0% | |
| TGACTTAGAGCACATGACAC+CGG | - | chr8.4:75932086-75932105 | MS.gene36577:CDS | 45.0% | |
| TGTAACCGGTCCTACTTAGT+GGG | - | chr8.4:75933774-75933793 | MS.gene36577:CDS | 45.0% | |
| TGTCCTACTTGGAGAGTTGA+GGG | - | chr8.4:75933081-75933100 | MS.gene36577:intron | 45.0% | |
| TTCAACATCCTCGGAAGTAG+TGG | + | chr8.4:75934485-75934504 | None:intergenic | 45.0% | |
| ! | AGGGAGCAAAGATGTTGCTT+TGG | - | chr8.4:75934810-75934829 | MS.gene36577:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+AGG | + | chr8.4:75933787-75933806 | None:intergenic | 45.0% |
| ! | GAGGAGGATGTTTCTATTGG+TGG | + | chr8.4:75934388-75934407 | None:intergenic | 45.0% |
| ! | GTGGTAATGATGAACCGGAA+AGG | + | chr8.4:75934876-75934895 | None:intergenic | 45.0% |
| ! | TCTGGTGATGACCAAAACGT+CGG | + | chr8.4:75935189-75935208 | None:intergenic | 45.0% |
| !! | ACTAACCATTGGTTTGGTGG+TGG | + | chr8.4:75934670-75934689 | None:intergenic | 45.0% |
| !! | ACTTTGGTTTGCTTCTACGC+AGG | + | chr8.4:75933165-75933184 | None:intergenic | 45.0% |
| !! | GACAATGCTTGGAGAGTGTT+TGG | + | chr8.4:75934638-75934657 | None:intergenic | 45.0% |
| !! | GGAACTAACCATTGGTTTGG+TGG | + | chr8.4:75934673-75934692 | None:intergenic | 45.0% |
| !!! | AACTTTTGGGACAAGCCCAA+AGG | + | chr8.4:75931567-75931586 | None:intergenic | 45.0% |
| !!! | ACTTTTGGGACAAGCCCAAA+GGG | + | chr8.4:75931566-75931585 | None:intergenic | 45.0% |
| !!! | GCTGACTCACTTGCTGATTT+TGG | + | chr8.4:75935276-75935295 | None:intergenic | 45.0% |
| AAGTCCTACGACATCGTCAG+GGG | + | chr8.4:75932808-75932827 | None:intergenic | 50.0% | |
| ACCTAATAGCACCCTGCAGT+CGG | - | chr8.4:75931690-75931709 | MS.gene36577:CDS | 50.0% | |
| ACTGTGTTGCAGCTTGGTTG+TGG | - | chr8.4:75931958-75931977 | MS.gene36577:CDS | 50.0% | |
| AGGGGCAATTGATGAGGGAA+AGG | - | chr8.4:75931141-75931160 | MS.gene36577:CDS | 50.0% | |
| ATCGGTACAAGGTCCTCACA+TGG | - | chr8.4:75932690-75932709 | MS.gene36577:intron | 50.0% | |
| CCTGTCATGTCTCCATCTGA+AGG | - | chr8.4:75934691-75934710 | MS.gene36577:intron | 50.0% | |
| CCTTCAGATGGAGACATGAC+AGG | + | chr8.4:75934694-75934713 | None:intergenic | 50.0% | |
| CGGTCCTACTTAGTGGGATA+AGG | - | chr8.4:75933780-75933799 | MS.gene36577:CDS | 50.0% | |
| GTACCTCATAATCGTACCGC+GGG | + | chr8.4:75931613-75931632 | None:intergenic | 50.0% | |
| GTCATGACTCGCCATCAACT+TGG | + | chr8.4:75932070-75932089 | None:intergenic | 50.0% | |
| GTGTCCTACTTGGAGAGTTG+AGG | - | chr8.4:75933080-75933099 | MS.gene36577:intron | 50.0% | |
| GTGTGACAGGTGGTATGACA+TGG | + | chr8.4:75933249-75933268 | None:intergenic | 50.0% | |
| TACCTCATAATCGTACCGCG+GGG | + | chr8.4:75931612-75931631 | None:intergenic | 50.0% | |
| TGCTTATGTGTCCGACTGCA+GGG | + | chr8.4:75931704-75931723 | None:intergenic | 50.0% | |
| !! | AACCATTGGTTTGGTGGTGG+TGG | + | chr8.4:75934667-75934686 | None:intergenic | 50.0% |
| !! | AGATGGTGGAAACTCGGCAT+AGG | - | chr8.4:75933570-75933589 | MS.gene36577:intron | 50.0% |
| !! | ATTGGTTTGGTGGTGGTGGA+GGG | + | chr8.4:75934663-75934682 | None:intergenic | 50.0% |
| !! | GCTTGGAGAGTGTTTGGCAT+TGG | + | chr8.4:75934632-75934651 | None:intergenic | 50.0% |
| !! | TTGGTTTGCTTCTACGCAGG+CGG | + | chr8.4:75933162-75933181 | None:intergenic | 50.0% |
| ACACCGTTATACGGCGGTTG+CGG | - | chr8.4:75934769-75934788 | MS.gene36577:intron | 55.0% | |
| ACCTCATAATCGTACCGCGG+GGG | + | chr8.4:75931611-75931630 | None:intergenic | 55.0% | |
| ACTCGACAGCAAGTCCGAGA+AGG | - | chr8.4:75934459-75934478 | MS.gene36577:CDS | 55.0% | |
| ATCTCCCCTGACGATGTCGT+AGG | - | chr8.4:75932801-75932820 | MS.gene36577:intron | 55.0% | |
| ATGATGCCGCCAGCATTTGG+AGG | + | chr8.4:75934748-75934767 | None:intergenic | 55.0% | |
| CCTACTTGGAGAGTTGAGGG+AGG | - | chr8.4:75933084-75933103 | MS.gene36577:intron | 55.0% | |
| CCTCACATGGCAAGAGAGAG+AGG | - | chr8.4:75932703-75932722 | MS.gene36577:intron | 55.0% | |
| CCTCCCTCAACTCTCCAAGT+AGG | + | chr8.4:75933087-75933106 | None:intergenic | 55.0% | |
| CCTCTCTCTCTTGCCATGTG+AGG | + | chr8.4:75932706-75932725 | None:intergenic | 55.0% | |
| CGACTCGAGTGATGAACACC+AGG | - | chr8.4:75935212-75935231 | MS.gene36577:CDS | 55.0% | |
| CTCCACCACCACCAAACCAA+TGG | - | chr8.4:75934662-75934681 | MS.gene36577:intron | 55.0% | |
| CTCGGAAGTAGTGGCCTTCT+CGG | + | chr8.4:75934476-75934495 | None:intergenic | 55.0% | |
| CTGTGACTATTTGTCCCCCG+CGG | - | chr8.4:75931594-75931613 | MS.gene36577:CDS | 55.0% | |
| GGTGGAGGGTAGACAATGCT+TGG | + | chr8.4:75934649-75934668 | None:intergenic | 55.0% | |
| GTCATGATGCCGCCAGCATT+TGG | + | chr8.4:75934751-75934770 | None:intergenic | 55.0% | |
| GTGCTTATGTGTCCGACTGC+AGG | + | chr8.4:75931705-75931724 | None:intergenic | 55.0% | |
| TCATCACTCGAGTCGCGATC+TGG | + | chr8.4:75935207-75935226 | None:intergenic | 55.0% | |
| TGATGCCGCCAGCATTTGGA+GGG | + | chr8.4:75934747-75934766 | None:intergenic | 55.0% | |
| ! | GGAGGGCATGGTCCAATGAT+TGG | + | chr8.4:75934730-75934749 | None:intergenic | 55.0% |
| !! | CATTGGTTTGGTGGTGGTGG+AGG | + | chr8.4:75934664-75934683 | None:intergenic | 55.0% |
| !! | GACCAAAACGTCGGTGCCAA+CGG | + | chr8.4:75935180-75935199 | None:intergenic | 55.0% |
| !! | GAGGACCAAAAGCACCTCCA+AGG | - | chr8.4:75931212-75931231 | MS.gene36577:CDS | 55.0% |
| !! | GTCGGTGCCAACGGAAACAA+AGG | + | chr8.4:75935171-75935190 | None:intergenic | 55.0% |
| !! | TCCGACTGCAGGGTGCTATT+AGG | + | chr8.4:75931694-75931713 | None:intergenic | 55.0% |
| !!! | TTCCGTTGGCACCGACGTTT+TGG | - | chr8.4:75935175-75935194 | MS.gene36577:CDS | 55.0% |
| CCATGCCCTCCAAATGCTGG+CGG | - | chr8.4:75934739-75934758 | MS.gene36577:intron | 60.0% | |
| CGAGAAGGCCACTACTTCCG+AGG | - | chr8.4:75934474-75934493 | MS.gene36577:CDS | 60.0% | |
| GGACCATGCCCTCCAAATGC+TGG | - | chr8.4:75934736-75934755 | MS.gene36577:intron | 60.0% | |
| GGACCGCAACCGCCGTATAA+CGG | + | chr8.4:75934775-75934794 | None:intergenic | 60.0% | |
| TCCCCCGCGGTACGATTATG+AGG | - | chr8.4:75931607-75931626 | MS.gene36577:CDS | 60.0% | |
| !! | GTACGGGATGGAGTGTTGCG+CGG | - | chr8.4:75933441-75933460 | MS.gene36577:intron | 60.0% |
| CCGCCAGCATTTGGAGGGCA+TGG | + | chr8.4:75934742-75934761 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 75931136 | 75935338 | 75931136 | ID=MS.gene36577 |
| chr8.4 | mRNA | 75931136 | 75935338 | 75931136 | ID=MS.gene36577.t1;Parent=MS.gene36577 |
| chr8.4 | exon | 75935120 | 75935338 | 75935120 | ID=MS.gene36577.t1.exon1;Parent=MS.gene36577.t1 |
| chr8.4 | CDS | 75935120 | 75935338 | 75935120 | ID=cds.MS.gene36577.t1;Parent=MS.gene36577.t1 |
| chr8.4 | exon | 75933603 | 75934504 | 75933603 | ID=MS.gene36577.t1.exon2;Parent=MS.gene36577.t1 |
| chr8.4 | CDS | 75933603 | 75934504 | 75933603 | ID=cds.MS.gene36577.t1;Parent=MS.gene36577.t1 |
| chr8.4 | exon | 75932246 | 75932297 | 75932246 | ID=MS.gene36577.t1.exon3;Parent=MS.gene36577.t1 |
| chr8.4 | CDS | 75932246 | 75932297 | 75932246 | ID=cds.MS.gene36577.t1;Parent=MS.gene36577.t1 |
| chr8.4 | exon | 75931136 | 75932152 | 75931136 | ID=MS.gene36577.t1.exon4;Parent=MS.gene36577.t1 |
| chr8.4 | CDS | 75931136 | 75932152 | 75931136 | ID=cds.MS.gene36577.t1;Parent=MS.gene36577.t1 |
| Gene Sequence |
| Protein sequence |
