Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36632.t1 | XP_003627044.1 | 92.6 | 377 | 16 | 1 | 1 | 365 | 78 | 454 | 1.30E-195 | 692.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36632.t1 | G7LGP0 | 92.6 | 377 | 16 | 1 | 1 | 365 | 78 | 454 | 9.4e-196 | 692.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050297 | MS.gene36632 | 0.804725 | 1.88E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene36632 | 0.824579 | 7.48E-54 | -1.69E-46 |
| MS.gene056041 | MS.gene36632 | 0.802246 | 6.15E-49 | -1.69E-46 |
| MS.gene061260 | MS.gene36632 | 0.817804 | 2.73E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36632.t1 | MTR_8g014490 | 92.573 | 377 | 16 | 1 | 1 | 365 | 78 | 454 | 0.0 | 636 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36632.t1 | AT4G12540 | 34.860 | 393 | 193 | 13 | 1 | 365 | 97 | 454 | 5.41e-50 | 174 |
| MS.gene36632.t1 | AT4G12540 | 34.351 | 393 | 195 | 13 | 1 | 365 | 80 | 437 | 4.00e-49 | 171 |
| MS.gene36632.t1 | AT4G12540 | 34.351 | 393 | 195 | 13 | 1 | 365 | 80 | 437 | 4.00e-49 | 171 |
| MS.gene36632.t1 | AT4G12540 | 34.351 | 393 | 195 | 13 | 1 | 365 | 73 | 430 | 4.50e-49 | 171 |
| MS.gene36632.t1 | AT4G12540 | 34.351 | 393 | 195 | 13 | 1 | 365 | 72 | 429 | 4.74e-49 | 171 |
Find 76 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTCAGTGAAATCTAATT+TGG | 0.166349 | 8.4:-76729317 | None:intergenic |
| GAAAGTGAACTTTGTAATTT+TGG | 0.178876 | 8.4:-76729073 | None:intergenic |
| CTCCTTCGCCTCTTGTTTCA+TGG | 0.201608 | 8.4:+76729194 | MS.gene36632:CDS |
| TCAAGCAAAGCACAAGATTT+TGG | 0.208841 | 8.4:-76729529 | None:intergenic |
| AGAGAAAGGGCAGGCTTTAT+TGG | 0.223544 | 8.4:-76729391 | None:intergenic |
| ATACTTTGAAGAAGGAATTA+TGG | 0.234678 | 8.4:+76730151 | MS.gene36632:CDS |
| CACACGACATATTTCAGATA+TGG | 0.242872 | 8.4:-76729554 | None:intergenic |
| AATAATGATTCAGTGCTTTA+CGG | 0.286271 | 8.4:+76729349 | MS.gene36632:CDS |
| GATACTAATGTAGTCTCTTT+AGG | 0.311138 | 8.4:-76729172 | None:intergenic |
| GATAACAATGATTTCGATAA+TGG | 0.320197 | 8.4:-76729271 | None:intergenic |
| GTAAAGCACTGAATCATTAT+TGG | 0.331032 | 8.4:-76729347 | None:intergenic |
| TCAGAAGATTCTGAAGCTTC+TGG | 0.335637 | 8.4:+76729634 | MS.gene36632:CDS |
| TCCTTTCCAATTGCTGACTT+TGG | 0.336920 | 8.4:-76729721 | None:intergenic |
| TACTTTGAAGAAGGAATTAT+GGG | 0.338127 | 8.4:+76730152 | MS.gene36632:CDS |
| GAAAGGGTTTCTTGACCTAT+TGG | 0.342475 | 8.4:+76730242 | MS.gene36632:CDS |
| TTGTCCAACGATTTCTCATC+AGG | 0.375325 | 8.4:-76729808 | None:intergenic |
| GGTTTGTGGTTGGTGTGGTT+TGG | 0.378722 | 8.4:-76729296 | None:intergenic |
| CGATGGTGTGACGCAGGGTT+TGG | 0.387486 | 8.4:+76729660 | MS.gene36632:CDS |
| TGTGTTCCAAAGTCAGCAAT+TGG | 0.392723 | 8.4:+76729715 | MS.gene36632:CDS |
| ATTGACTTGTTGCTTAAGAA+TGG | 0.395329 | 8.4:-76729872 | None:intergenic |
| TAATGAACTCCAACAGGAAA+AGG | 0.401395 | 8.4:-76729604 | None:intergenic |
| CAATGTTTCCCCATGAGATC+TGG | 0.404517 | 8.4:-76729694 | None:intergenic |
| GTTTGAAACTTAGACTCAAA+TGG | 0.405729 | 8.4:-76730201 | None:intergenic |
| GGAGGTGAGGTAAGCCAAAC+AGG | 0.412175 | 8.4:-76729760 | None:intergenic |
| AATAAAGCCTGCCCTTTCTC+TGG | 0.439735 | 8.4:+76729393 | MS.gene36632:CDS |
| ATGTTGAAGCATCACCTGTT+TGG | 0.440053 | 8.4:+76729746 | MS.gene36632:CDS |
| CAAATTAGATTTCACTGAGT+TGG | 0.440495 | 8.4:+76729318 | MS.gene36632:CDS |
| ACACGACATATTTCAGATAT+GGG | 0.441396 | 8.4:-76729553 | None:intergenic |
| GTGAAATCTAATTTGGTTTG+TGG | 0.455967 | 8.4:-76729310 | None:intergenic |
| AATCTAATTTGGTTTGTGGT+TGG | 0.462236 | 8.4:-76729306 | None:intergenic |
| CCTCTTCACTCACCAGAGAA+AGG | 0.463469 | 8.4:-76729405 | None:intergenic |
| TCACTGTAATGAACTCCAAC+AGG | 0.463669 | 8.4:-76729610 | None:intergenic |
| CACAGGAAGCTTCTTCCAAT+AGG | 0.469810 | 8.4:-76730257 | None:intergenic |
| AGGGCAGGCTTTATTGGAGT+TGG | 0.475554 | 8.4:-76729385 | None:intergenic |
| CAATAAATTGAATGTGGAAG+AGG | 0.483861 | 8.4:+76729891 | MS.gene36632:CDS |
| AATGAACTCCAACAGGAAAA+GGG | 0.490414 | 8.4:-76729603 | None:intergenic |
| TGGCAGCGATGGTGTGACGC+AGG | 0.497686 | 8.4:+76729654 | MS.gene36632:CDS |
| GCATGAATTGATTTCTTCGC+CGG | 0.499731 | 8.4:+76729444 | MS.gene36632:CDS |
| CTCTTCACTCACCAGAGAAA+GGG | 0.500227 | 8.4:-76729404 | None:intergenic |
| TCAGTAAGAGTTCTCAGAAA+GGG | 0.502446 | 8.4:+76730226 | MS.gene36632:CDS |
| GTGTGGGTAATGATAAGTTT+CGG | 0.503235 | 8.4:+76729572 | MS.gene36632:CDS |
| GAAATCGTTGGACAAGGAAA+AGG | 0.507749 | 8.4:+76729816 | MS.gene36632:CDS |
| CCTTTCTCTGGTGAGTGAAG+AGG | 0.513821 | 8.4:+76729405 | MS.gene36632:CDS |
| TTGTTATCAAATGCAGCCAT+GGG | 0.516742 | 8.4:+76729048 | None:intergenic |
| AATGATTTCGATAATGGAAG+TGG | 0.516836 | 8.4:-76729265 | None:intergenic |
| CGCCATGAAACAAGAGGCGA+AGG | 0.518234 | 8.4:-76729196 | None:intergenic |
| GGCAGCGATGGTGTGACGCA+GGG | 0.523574 | 8.4:+76729655 | MS.gene36632:CDS |
| TTCACTTTCATCAACTTCAG+TGG | 0.526000 | 8.4:+76729087 | MS.gene36632:CDS |
| GTTGAAGTATCCAGATCTCA+TGG | 0.526419 | 8.4:+76729684 | MS.gene36632:CDS |
| TCTGAAGCTTCTGGCAGCGA+TGG | 0.532379 | 8.4:+76729643 | MS.gene36632:CDS |
| GTCAGTAAGAGTTCTCAGAA+AGG | 0.553014 | 8.4:+76730225 | MS.gene36632:CDS |
| TGGTGAAAATACTTTGAAGA+AGG | 0.558898 | 8.4:+76730143 | MS.gene36632:CDS |
| CATATCTGAAATATGTCGTG+TGG | 0.561959 | 8.4:+76729555 | MS.gene36632:CDS |
| ATACAAAGAGGGAAGCGTGC+TGG | 0.568703 | 8.4:+76730123 | MS.gene36632:CDS |
| TCACTCACCAGAGAAAGGGC+AGG | 0.573111 | 8.4:-76729400 | None:intergenic |
| AATTTGGTTTGTGGTTGGTG+TGG | 0.575140 | 8.4:-76729301 | None:intergenic |
| AGGAGTCATCATATAAAGCA+TGG | 0.581661 | 8.4:-76729488 | None:intergenic |
| AAGCACTGAATCATTATTGG+AGG | 0.583598 | 8.4:-76729344 | None:intergenic |
| ACAAGTCAATAAATTGAATG+TGG | 0.587588 | 8.4:+76729885 | MS.gene36632:CDS |
| TTGAAGTATCCAGATCTCAT+GGG | 0.591173 | 8.4:+76729685 | MS.gene36632:CDS |
| CCTGAAAACACGATACAAAG+AGG | 0.604121 | 8.4:+76730111 | MS.gene36632:CDS |
| ATGAACTCCAACAGGAAAAG+GGG | 0.611782 | 8.4:-76729602 | None:intergenic |
| GTTGTTATCAAATGCAGCCA+TGG | 0.614707 | 8.4:+76729047 | None:intergenic |
| GACACCTGATGAGAAATCGT+TGG | 0.616032 | 8.4:+76729804 | MS.gene36632:CDS |
| CTGAAAACACGATACAAAGA+GGG | 0.620143 | 8.4:+76730112 | MS.gene36632:CDS |
| AACTCCAACAGGAAAAGGGG+TGG | 0.626121 | 8.4:-76729599 | None:intergenic |
| TGATGAGAAATCGTTGGACA+AGG | 0.631692 | 8.4:+76729810 | MS.gene36632:CDS |
| TCCAAAGTCAGCAATTGGAA+AGG | 0.633354 | 8.4:+76729720 | MS.gene36632:CDS |
| TTAGCACGCCATGAAACAAG+AGG | 0.638632 | 8.4:-76729202 | None:intergenic |
| ATATCTGAAATATGTCGTGT+GGG | 0.639858 | 8.4:+76729556 | MS.gene36632:CDS |
| GTGGAAGAGGATATTTCCAA+AGG | 0.646607 | 8.4:+76729904 | MS.gene36632:CDS |
| TGAAGTATCCAGATCTCATG+GGG | 0.668354 | 8.4:+76729686 | MS.gene36632:CDS |
| TGTTATCAAATGCAGCCATG+GGG | 0.714680 | 8.4:+76729049 | None:intergenic |
| ATATAGAGAGCACTCCCATG+TGG | 0.723054 | 8.4:+76730082 | MS.gene36632:CDS |
| GCTAATTGTACTGTTCAGCG+AGG | 0.740131 | 8.4:+76729220 | MS.gene36632:CDS |
| AGTCATCATATAAAGCATGG+AGG | 0.749944 | 8.4:-76729485 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATAATGATTCAGTGCTTTA+CGG | + | chr8.4:76729349-76729368 | MS.gene36632:CDS | 25.0% |
| ! | ACAAGTCAATAAATTGAATG+TGG | + | chr8.4:76729885-76729904 | MS.gene36632:CDS | 25.0% |
| ! | AGCTATAAGGAATATATAAC+AGG | - | chr8.4:76729978-76729997 | None:intergenic | 25.0% |
| ! | GATAACAATGATTTCGATAA+TGG | - | chr8.4:76729274-76729293 | None:intergenic | 25.0% |
| !! | AAAAAATCTTGTTGTAACCA+AGG | + | chr8.4:76729940-76729959 | MS.gene36632:intron | 25.0% |
| !! | ATACTTTGAAGAAGGAATTA+TGG | + | chr8.4:76730151-76730170 | MS.gene36632:CDS | 25.0% |
| !! | GAAAGTGAACTTTGTAATTT+TGG | - | chr8.4:76729076-76729095 | None:intergenic | 25.0% |
| !! | TACTTTGAAGAAGGAATTAT+GGG | + | chr8.4:76730152-76730171 | MS.gene36632:CDS | 25.0% |
| !!! | CAAAAACTTGTGTTTTGTTA+GGG | + | chr8.4:76729782-76729801 | MS.gene36632:CDS | 25.0% |
| !!! | TATATTCCTTATAGCTTGTT+TGG | + | chr8.4:76729982-76730001 | MS.gene36632:intron | 25.0% |
| !!! | TTGGTTACAACAAGATTTTT+TGG | - | chr8.4:76729941-76729960 | None:intergenic | 25.0% |
| !!! | TTGTGTTTTTTCTTCTTTTC+AGG | + | chr8.4:76730036-76730055 | MS.gene36632:intron | 25.0% |
| ACACGACATATTTCAGATAT+GGG | - | chr8.4:76729556-76729575 | None:intergenic | 30.0% | |
| CAAATTAGATTTCACTGAGT+TGG | + | chr8.4:76729318-76729337 | MS.gene36632:CDS | 30.0% | |
| CAACTCAGTGAAATCTAATT+TGG | - | chr8.4:76729320-76729339 | None:intergenic | 30.0% | |
| CAATAAATTGAATGTGGAAG+AGG | + | chr8.4:76729891-76729910 | MS.gene36632:CDS | 30.0% | |
| GATACTAATGTAGTCTCTTT+AGG | - | chr8.4:76729175-76729194 | None:intergenic | 30.0% | |
| TGTTAACCAAACAAGCTATA+AGG | - | chr8.4:76729991-76730010 | None:intergenic | 30.0% | |
| ! | ATATCTGAAATATGTCGTGT+GGG | + | chr8.4:76729556-76729575 | MS.gene36632:CDS | 30.0% |
| ! | CCTAACAAAACACAAGTTTT+TGG | - | chr8.4:76729784-76729803 | None:intergenic | 30.0% |
| ! | GTTTGAAACTTAGACTCAAA+TGG | - | chr8.4:76730204-76730223 | None:intergenic | 30.0% |
| ! | TGGTGAAAATACTTTGAAGA+AGG | + | chr8.4:76730143-76730162 | MS.gene36632:CDS | 30.0% |
| !! | AACAAAACACAAGTTTTTGG+AGG | - | chr8.4:76729781-76729800 | None:intergenic | 30.0% |
| !! | AATCTAATTTGGTTTGTGGT+TGG | - | chr8.4:76729309-76729328 | None:intergenic | 30.0% |
| !! | AATGATTTCGATAATGGAAG+TGG | - | chr8.4:76729268-76729287 | None:intergenic | 30.0% |
| !! | ATAGCTTGTTTGGTTAACAT+GGG | + | chr8.4:76729992-76730011 | MS.gene36632:intron | 30.0% |
| !! | ATTGACTTGTTGCTTAAGAA+TGG | - | chr8.4:76729875-76729894 | None:intergenic | 30.0% |
| !! | CCAAAAACTTGTGTTTTGTT+AGG | + | chr8.4:76729781-76729800 | MS.gene36632:CDS | 30.0% |
| !! | GTAAAGCACTGAATCATTAT+TGG | - | chr8.4:76729350-76729369 | None:intergenic | 30.0% |
| !! | GTGAAATCTAATTTGGTTTG+TGG | - | chr8.4:76729313-76729332 | None:intergenic | 30.0% |
| !! | GTGTCTATTTTAGAAAGATC+CGG | - | chr8.4:76729466-76729485 | None:intergenic | 30.0% |
| !! | TATAGCTTGTTTGGTTAACA+TGG | + | chr8.4:76729991-76730010 | MS.gene36632:intron | 30.0% |
| AATGAACTCCAACAGGAAAA+GGG | - | chr8.4:76729606-76729625 | None:intergenic | 35.0% | |
| AGGAGTCATCATATAAAGCA+TGG | - | chr8.4:76729491-76729510 | None:intergenic | 35.0% | |
| AGTCATCATATAAAGCATGG+AGG | - | chr8.4:76729488-76729507 | None:intergenic | 35.0% | |
| CACACGACATATTTCAGATA+TGG | - | chr8.4:76729557-76729576 | None:intergenic | 35.0% | |
| CTGAAAACACGATACAAAGA+GGG | + | chr8.4:76730112-76730131 | MS.gene36632:CDS | 35.0% | |
| GTGTGGGTAATGATAAGTTT+CGG | + | chr8.4:76729572-76729591 | MS.gene36632:CDS | 35.0% | |
| TAATGAACTCCAACAGGAAA+AGG | - | chr8.4:76729607-76729626 | None:intergenic | 35.0% | |
| TCAGTAAGAGTTCTCAGAAA+GGG | + | chr8.4:76730226-76730245 | MS.gene36632:CDS | 35.0% | |
| TTCACTTTCATCAACTTCAG+TGG | + | chr8.4:76729087-76729106 | MS.gene36632:CDS | 35.0% | |
| ! | CATATCTGAAATATGTCGTG+TGG | + | chr8.4:76729555-76729574 | MS.gene36632:CDS | 35.0% |
| ! | TCAAGCAAAGCACAAGATTT+TGG | - | chr8.4:76729532-76729551 | None:intergenic | 35.0% |
| ! | TTGAAGTATCCAGATCTCAT+GGG | + | chr8.4:76729685-76729704 | MS.gene36632:CDS | 35.0% |
| !! | AAGCACTGAATCATTATTGG+AGG | - | chr8.4:76729347-76729366 | None:intergenic | 35.0% |
| !! | TTTGGCTTGATTATGACCTT+TGG | - | chr8.4:76729923-76729942 | None:intergenic | 35.0% |
| !!! | TTCTTTTCAGGTGATTTTGC+TGG | + | chr8.4:76730048-76730067 | MS.gene36632:intron | 35.0% |
| ATGAACTCCAACAGGAAAAG+GGG | - | chr8.4:76729605-76729624 | None:intergenic | 40.0% | |
| CCTGAAAACACGATACAAAG+AGG | + | chr8.4:76730111-76730130 | MS.gene36632:CDS | 40.0% | |
| GAAAGGGTTTCTTGACCTAT+TGG | + | chr8.4:76730242-76730261 | MS.gene36632:CDS | 40.0% | |
| GAAATCGTTGGACAAGGAAA+AGG | + | chr8.4:76729816-76729835 | MS.gene36632:CDS | 40.0% | |
| GTCAGTAAGAGTTCTCAGAA+AGG | + | chr8.4:76730225-76730244 | MS.gene36632:CDS | 40.0% | |
| GTGGAAGAGGATATTTCCAA+AGG | + | chr8.4:76729904-76729923 | MS.gene36632:CDS | 40.0% | |
| TCACTGTAATGAACTCCAAC+AGG | - | chr8.4:76729613-76729632 | None:intergenic | 40.0% | |
| TCCAAAGTCAGCAATTGGAA+AGG | + | chr8.4:76729720-76729739 | MS.gene36632:CDS | 40.0% | |
| TGATGAGAAATCGTTGGACA+AGG | + | chr8.4:76729810-76729829 | MS.gene36632:CDS | 40.0% | |
| TGTGTTCCAAAGTCAGCAAT+TGG | + | chr8.4:76729715-76729734 | MS.gene36632:CDS | 40.0% | |
| TTGTCCAACGATTTCTCATC+AGG | - | chr8.4:76729811-76729830 | None:intergenic | 40.0% | |
| TTGTTGTAACCAAGGTAGTG+TGG | + | chr8.4:76729948-76729967 | MS.gene36632:intron | 40.0% | |
| ! | AGCAAAGCACAAGATTTTGG+AGG | - | chr8.4:76729529-76729548 | None:intergenic | 40.0% |
| ! | ATGTTGAAGCATCACCTGTT+TGG | + | chr8.4:76729746-76729765 | MS.gene36632:CDS | 40.0% |
| ! | CCTCTTTGTATCGTGTTTTC+AGG | - | chr8.4:76730114-76730133 | None:intergenic | 40.0% |
| ! | GCATGAATTGATTTCTTCGC+CGG | + | chr8.4:76729444-76729463 | MS.gene36632:CDS | 40.0% |
| ! | GTTGAAGTATCCAGATCTCA+TGG | + | chr8.4:76729684-76729703 | MS.gene36632:CDS | 40.0% |
| ! | TGAAGTATCCAGATCTCATG+GGG | + | chr8.4:76729686-76729705 | MS.gene36632:CDS | 40.0% |
| !! | AACACAAGTTTTTGGAGGTG+AGG | - | chr8.4:76729776-76729795 | None:intergenic | 40.0% |
| !! | AATTTGGTTTGTGGTTGGTG+TGG | - | chr8.4:76729304-76729323 | None:intergenic | 40.0% |
| !! | CTTTGTAATTTTGGTCCCCA+TGG | - | chr8.4:76729067-76729086 | None:intergenic | 40.0% |
| !! | TCAGAAGATTCTGAAGCTTC+TGG | + | chr8.4:76729634-76729653 | MS.gene36632:CDS | 40.0% |
| !! | TCCTTTCCAATTGCTGACTT+TGG | - | chr8.4:76729724-76729743 | None:intergenic | 40.0% |
| !! | TTTTCAGGATTCAGCCACAT+GGG | - | chr8.4:76730099-76730118 | None:intergenic | 40.0% |
| AATAAAGCCTGCCCTTTCTC+TGG | + | chr8.4:76729393-76729412 | MS.gene36632:CDS | 45.0% | |
| CAATGTTTCCCCATGAGATC+TGG | - | chr8.4:76729697-76729716 | None:intergenic | 45.0% | |
| CACAGGAAGCTTCTTCCAAT+AGG | - | chr8.4:76730260-76730279 | None:intergenic | 45.0% | |
| CTCTTCACTCACCAGAGAAA+GGG | - | chr8.4:76729407-76729426 | None:intergenic | 45.0% | |
| GACACCTGATGAGAAATCGT+TGG | + | chr8.4:76729804-76729823 | MS.gene36632:CDS | 45.0% | |
| GCTAATTGTACTGTTCAGCG+AGG | + | chr8.4:76729220-76729239 | MS.gene36632:CDS | 45.0% | |
| TTAGCACGCCATGAAACAAG+AGG | - | chr8.4:76729205-76729224 | None:intergenic | 45.0% | |
| ! | AGAGAAAGGGCAGGCTTTAT+TGG | - | chr8.4:76729394-76729413 | None:intergenic | 45.0% |
| !! | ATATAGAGAGCACTCCCATG+TGG | + | chr8.4:76730082-76730101 | MS.gene36632:CDS | 45.0% |
| !! | GGAGGTGACATTTTCAAGCA+AGG | - | chr8.4:76729511-76729530 | None:intergenic | 45.0% |
| !! | GTTTTCAGGATTCAGCCACA+TGG | - | chr8.4:76730100-76730119 | None:intergenic | 45.0% |
| AACTCCAACAGGAAAAGGGG+TGG | - | chr8.4:76729602-76729621 | None:intergenic | 50.0% | |
| ACAGGTGAACCACACTACCT+TGG | - | chr8.4:76729960-76729979 | None:intergenic | 50.0% | |
| CCTCTTCACTCACCAGAGAA+AGG | - | chr8.4:76729408-76729427 | None:intergenic | 50.0% | |
| CCTTTCTCTGGTGAGTGAAG+AGG | + | chr8.4:76729405-76729424 | MS.gene36632:CDS | 50.0% | |
| ! | AAGTCCACCCCTTTTCCTGT+TGG | + | chr8.4:76729595-76729614 | MS.gene36632:CDS | 50.0% |
| ! | ATACAAAGAGGGAAGCGTGC+TGG | + | chr8.4:76730123-76730142 | MS.gene36632:CDS | 50.0% |
| ! | CTCCTTCGCCTCTTGTTTCA+TGG | + | chr8.4:76729194-76729213 | MS.gene36632:CDS | 50.0% |
| ! | GGTTTGTGGTTGGTGTGGTT+TGG | - | chr8.4:76729299-76729318 | None:intergenic | 50.0% |
| !! | AGGGCAGGCTTTATTGGAGT+TGG | - | chr8.4:76729388-76729407 | None:intergenic | 50.0% |
| CGCCATGAAACAAGAGGCGA+AGG | - | chr8.4:76729199-76729218 | None:intergenic | 55.0% | |
| GGAGGTGAGGTAAGCCAAAC+AGG | - | chr8.4:76729763-76729782 | None:intergenic | 55.0% | |
| TCACTCACCAGAGAAAGGGC+AGG | - | chr8.4:76729403-76729422 | None:intergenic | 55.0% | |
| ! | TCTGAAGCTTCTGGCAGCGA+TGG | + | chr8.4:76729643-76729662 | MS.gene36632:CDS | 55.0% |
| CGATGGTGTGACGCAGGGTT+TGG | + | chr8.4:76729660-76729679 | MS.gene36632:CDS | 60.0% | |
| GGCAGCGATGGTGTGACGCA+GGG | + | chr8.4:76729655-76729674 | MS.gene36632:CDS | 65.0% | |
| TGGCAGCGATGGTGTGACGC+AGG | + | chr8.4:76729654-76729673 | MS.gene36632:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 76729058 | 76730287 | 76729058 | ID=MS.gene36632 |
| chr8.4 | mRNA | 76729058 | 76730287 | 76729058 | ID=MS.gene36632.t1;Parent=MS.gene36632 |
| chr8.4 | exon | 76729058 | 76729925 | 76729058 | ID=MS.gene36632.t1.exon1;Parent=MS.gene36632.t1 |
| chr8.4 | CDS | 76729058 | 76729925 | 76729058 | ID=cds.MS.gene36632.t1;Parent=MS.gene36632.t1 |
| chr8.4 | exon | 76730058 | 76730287 | 76730058 | ID=MS.gene36632.t1.exon2;Parent=MS.gene36632.t1 |
| chr8.4 | CDS | 76730058 | 76730287 | 76730058 | ID=cds.MS.gene36632.t1;Parent=MS.gene36632.t1 |
| Gene Sequence |
| Protein sequence |
