Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36647.t1 | XP_003624062.1 | 96.5 | 1057 | 35 | 2 | 1 | 1055 | 1 | 1057 | 0.00E+00 | 1820.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36647.t1 | G7L6M3 | 96.5 | 1057 | 35 | 2 | 1 | 1055 | 1 | 1057 | 0.0e+00 | 1820.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050623 | MS.gene36647 | 0.812698 | 3.72E-51 | -1.69E-46 |
MS.gene051662 | MS.gene36647 | -0.804437 | 2.16E-49 | -1.69E-46 |
MS.gene052309 | MS.gene36647 | 0.845455 | 4.02E-59 | -1.69E-46 |
MS.gene053836 | MS.gene36647 | -0.808303 | 3.31E-50 | -1.69E-46 |
MS.gene058661 | MS.gene36647 | 0.979329 | 9.95E-148 | -1.69E-46 |
MS.gene059894 | MS.gene36647 | -0.802985 | 4.33E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36647.t1 | MTR_7g078820 | 98.392 | 1057 | 15 | 2 | 1 | 1055 | 1 | 1057 | 0.0 | 2118 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36647.t1 | AT4G01290 | 41.176 | 714 | 367 | 21 | 1 | 690 | 2 | 686 | 8.46e-126 | 408 |
MS.gene36647.t1 | AT4G01290 | 36.301 | 292 | 143 | 16 | 782 | 1055 | 724 | 990 | 2.04e-24 | 111 |
MS.gene36647.t1 | AT4G01290 | 39.860 | 715 | 376 | 22 | 1 | 690 | 2 | 687 | 3.50e-124 | 404 |
MS.gene36647.t1 | AT4G01290 | 36.301 | 292 | 143 | 16 | 782 | 1055 | 725 | 991 | 2.15e-24 | 110 |
Find 283 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCGGGGAACCCATGGAAAA+TGG | 0.159786 | 7.3:-28427323 | MS.gene36647:CDS |
CTCTTCAAATCTATTTGATT+TGG | 0.179124 | 7.3:+28421883 | None:intergenic |
CTATCACAAGTTGGAGAAAA+TGG | 0.222061 | 7.3:-28422379 | MS.gene36647:CDS |
ATAATTGAGCTAACCTTATA+TGG | 0.226948 | 7.3:+28426863 | None:intergenic |
TCCAACCAACCGTCAATTTC+CGG | 0.228998 | 7.3:-28421384 | MS.gene36647:CDS |
GATATCCCCAACATTAAAAT+TGG | 0.243593 | 7.3:-28423253 | MS.gene36647:CDS |
AAATGGGATTCTCGCTCTTC+TGG | 0.244314 | 7.3:-28427306 | MS.gene36647:CDS |
CATGAGCTAGACTTGGGTTT+TGG | 0.258332 | 7.3:-28420628 | MS.gene36647:CDS |
ATGAGTGTTTGAGGATATTT+TGG | 0.264602 | 7.3:+28424614 | None:intergenic |
CAACTTAATGCTGAAGTAAA+AGG | 0.265763 | 7.3:-28423157 | MS.gene36647:CDS |
GAAATCAAGTTATCTTCTTC+AGG | 0.268072 | 7.3:+28421755 | None:intergenic |
CCTGAGCATGATGGACTTCT+AGG | 0.280439 | 7.3:-28427001 | MS.gene36647:CDS |
AGAGGTTCAATTGGATCTTC+AGG | 0.285185 | 7.3:-28422031 | MS.gene36647:CDS |
TCTTCAAATCTATTTGATTT+GGG | 0.286002 | 7.3:+28421884 | None:intergenic |
CTCGTGGTCCTTATGATATA+AGG | 0.286943 | 7.3:-28421574 | MS.gene36647:CDS |
CGAATTTCCAACAGATAAAA+AGG | 0.287503 | 7.3:+28421712 | None:intergenic |
TCTTTCAATGATGAAACTTT+TGG | 0.293053 | 7.3:-28426637 | MS.gene36647:CDS |
AAAAGCCTCTGAAGTGCTTC+TGG | 0.301885 | 7.3:+28420718 | None:intergenic |
TCTCAATCGGAATGGGATTC+AGG | 0.308473 | 7.3:-28427261 | MS.gene36647:intron |
AATACCAGCCATCGGATTAC+TGG | 0.312749 | 7.3:+28421199 | None:intergenic |
TTACCTTGCAATTGCATTCC+AGG | 0.315595 | 7.3:+28421110 | None:intergenic |
TCATCCTCCTCGCCCATATA+AGG | 0.315808 | 7.3:-28426876 | MS.gene36647:intron |
TTATTAGCTCCTGCGGTTGC+TGG | 0.317567 | 7.3:-28420754 | MS.gene36647:intron |
ACAGATTCTGGAAAACGTTT+TGG | 0.322097 | 7.3:-28427052 | MS.gene36647:intron |
CAACCAAGCAGTGTTGTAAC+TGG | 0.326835 | 7.3:-28421335 | MS.gene36647:CDS |
AAGGGCGGGCTGCAGGTTTC+CGG | 0.329800 | 7.3:-28422583 | MS.gene36647:CDS |
GAAGAGCAGTGGTTAGGTTA+TGG | 0.343168 | 7.3:-28421866 | MS.gene36647:CDS |
CTCCATGTCTCATCTGCTTT+AGG | 0.351451 | 7.3:+28422836 | None:intergenic |
AATGAGCAAACTTTGAAGAT+TGG | 0.360892 | 7.3:+28422801 | None:intergenic |
AACATTGAGCTTGCAAAACC+TGG | 0.363542 | 7.3:+28424654 | None:intergenic |
TCAAAGCCAATCCATCCTTC+AGG | 0.372259 | 7.3:-28420673 | MS.gene36647:CDS |
CGGTGAAAAGGGCGGGCTGC+AGG | 0.378394 | 7.3:-28422590 | MS.gene36647:CDS |
TGGTCCAATGTTGAATCAAC+TGG | 0.378775 | 7.3:-28421477 | MS.gene36647:CDS |
GCATCGGCGTTTGCTTCCTC+TGG | 0.379318 | 7.3:+28422148 | None:intergenic |
TTATTGACGATGATTCAAAA+AGG | 0.380479 | 7.3:-28424791 | MS.gene36647:CDS |
AGACCACCTGGGTATGCGCC+TGG | 0.382875 | 7.3:-28426962 | MS.gene36647:CDS |
GGCGCATACCCAGGTGGTCT+TGG | 0.384351 | 7.3:+28426965 | None:intergenic |
CCAACCAACCGTCAATTTCC+GGG | 0.388733 | 7.3:-28421383 | MS.gene36647:CDS |
TCTGTTCAAAGAGGTTCAAT+TGG | 0.389156 | 7.3:-28422040 | MS.gene36647:CDS |
CTAAGGCTAGTGGTTTCAAT+AGG | 0.390299 | 7.3:-28421796 | MS.gene36647:CDS |
AATCTTCAAAGTTTGCTCAT+TGG | 0.391747 | 7.3:-28422799 | MS.gene36647:CDS |
GGGAAGCCGTGCATTGGGTT+TGG | 0.393024 | 7.3:+28421167 | None:intergenic |
CTCTGCTGCATGAGTGTTTG+AGG | 0.394869 | 7.3:+28424605 | None:intergenic |
ACTTATTGTTGGCGGTGAAA+AGG | 0.395533 | 7.3:-28422602 | MS.gene36647:CDS |
AAAGACTTTGGTGCAAAGAC+TGG | 0.396711 | 7.3:-28422328 | MS.gene36647:CDS |
CTCAATGTTGGAAAGGAATA+CGG | 0.404826 | 7.3:-28424640 | MS.gene36647:CDS |
CCAATGCACGGCTTCCCATT+TGG | 0.405279 | 7.3:-28421161 | MS.gene36647:CDS |
GTCTGCTCTTTCAGAAGCCT+TGG | 0.406626 | 7.3:-28423206 | MS.gene36647:CDS |
TTGGATCAAGCAACTGATAG+TGG | 0.411182 | 7.3:-28427798 | MS.gene36647:CDS |
GGATGTTGCTGGCCACCAAA+TGG | 0.415979 | 7.3:+28421146 | None:intergenic |
GGGCACAGCCAGGGGATTCA+TGG | 0.419832 | 7.3:-28420652 | MS.gene36647:CDS |
TGTTGAGATTACTAGAAAAC+TGG | 0.421998 | 7.3:-28421660 | MS.gene36647:CDS |
CGCTTGAAGGACAAAGACTT+TGG | 0.422648 | 7.3:-28422340 | MS.gene36647:CDS |
TTTGTTATCGTTTAGTGGAT+TGG | 0.423321 | 7.3:-28427631 | MS.gene36647:CDS |
GGGATCCTTACATAAAGATA+TGG | 0.427479 | 7.3:-28422248 | MS.gene36647:CDS |
GGCCAGCAACATCCTAGTTT+AGG | 0.428181 | 7.3:-28421137 | MS.gene36647:CDS |
TTGGAGTTGTGAAGGTCGGT+GGG | 0.430824 | 7.3:+28421520 | None:intergenic |
TACGGCTCATTAGATCGATT+TGG | 0.431926 | 7.3:+28426899 | None:intergenic |
GACTTGCTCTCACTTATTGT+TGG | 0.432283 | 7.3:-28422613 | MS.gene36647:CDS |
GGATTACAATAAGTAAAATT+CGG | 0.434881 | 7.3:+28422535 | None:intergenic |
GTCTCATCTGCTTTAGGATC+GGG | 0.437961 | 7.3:+28422842 | None:intergenic |
TTCATATCCCCTCTGGTTGG+AGG | 0.439074 | 7.3:+28427354 | None:intergenic |
CTTATTGTTGGCGGTGAAAA+GGG | 0.439662 | 7.3:-28422601 | MS.gene36647:CDS |
TGAACCTCTTTGAACAGAAA+GGG | 0.440701 | 7.3:+28422045 | None:intergenic |
GGGGCATTGTGGCACCCCTT+GGG | 0.441303 | 7.3:+28421228 | None:intergenic |
GGAGGACGAAGCATATTTCC+CGG | 0.442904 | 7.3:+28421365 | None:intergenic |
CCAAATGGGAAGCCGTGCAT+TGG | 0.443249 | 7.3:+28421161 | None:intergenic |
CCTGGCTGTGCCCTGAAGGA+TGG | 0.446297 | 7.3:+28420662 | None:intergenic |
CAGGCTGGGCAACTTGTGCC+TGG | 0.448280 | 7.3:-28423439 | MS.gene36647:CDS |
ATCATCTCAGCAGCGCTTGA+AGG | 0.449011 | 7.3:-28422353 | MS.gene36647:CDS |
CACCTAAACTAGGATGTTGC+TGG | 0.449036 | 7.3:+28421135 | None:intergenic |
TCGTGGTCCTTATGATATAA+GGG | 0.450375 | 7.3:-28421573 | MS.gene36647:CDS |
CAAATGGGAAGCCGTGCATT+GGG | 0.454851 | 7.3:+28421162 | None:intergenic |
AAGAACTGCTTGTAAAATCT+CGG | 0.454918 | 7.3:+28422429 | None:intergenic |
GGGAAGTCCACTTCAATTGA+TGG | 0.455011 | 7.3:-28422307 | MS.gene36647:CDS |
GTTGGAGTTGTGAAGGTCGG+TGG | 0.456717 | 7.3:+28421519 | None:intergenic |
GCTCATTGGTTTGCTGAAGA+AGG | 0.458746 | 7.3:-28422785 | MS.gene36647:intron |
GCGGGGAACCCATGGAAAAT+GGG | 0.458861 | 7.3:-28427322 | MS.gene36647:CDS |
GCATATTTCCCGGAAATTGA+CGG | 0.459444 | 7.3:+28421375 | None:intergenic |
TTGTCATTACCTCGAAACTT+AGG | 0.460895 | 7.3:+28426929 | None:intergenic |
ACACTGCTTGGTTGATGAAA+AGG | 0.461348 | 7.3:+28421344 | None:intergenic |
CATCCTAGTTTAGGTGGCCC+TGG | 0.462337 | 7.3:-28421128 | MS.gene36647:CDS |
TAGTTCCATATCTTTATGTA+AGG | 0.463486 | 7.3:+28422243 | None:intergenic |
GGTTGATGAGTTTGTTCTGA+TGG | 0.463518 | 7.3:+28421905 | None:intergenic |
ACATGCTCACCAGCGGGTTC+AGG | 0.464434 | 7.3:+28422514 | None:intergenic |
AGAACTGCTTGTAAAATCTC+GGG | 0.466853 | 7.3:+28422430 | None:intergenic |
TCGTTATCCACTTGCTTGGT+TGG | 0.468654 | 7.3:+28423358 | None:intergenic |
AGATTTGAAGAGCAGTGGTT+AGG | 0.471742 | 7.3:-28421872 | MS.gene36647:CDS |
AAACGAAGATCAGAGCTTGT+TGG | 0.471779 | 7.3:-28427817 | MS.gene36647:CDS |
TGAATTTGAAGACGCTTCGC+TGG | 0.472234 | 7.3:-28427442 | MS.gene36647:CDS |
ATAAGTGAGAGCAAGTCATT+TGG | 0.474963 | 7.3:+28422619 | None:intergenic |
TCATATCCCCTCTGGTTGGA+GGG | 0.477019 | 7.3:+28427355 | None:intergenic |
TTTCCTCATCAATTCGAAAG+AGG | 0.477961 | 7.3:+28424878 | None:intergenic |
TAACAAAGAAAGAAGGTGTT+CGG | 0.478062 | 7.3:+28422276 | None:intergenic |
TGGAGTGTACAAACGAGGAC+AGG | 0.479619 | 7.3:-28426609 | MS.gene36647:CDS |
TAAAATTCGGTGCAACATGA+TGG | 0.480534 | 7.3:+28422548 | None:intergenic |
CCATCCTTCAGGGCACAGCC+AGG | 0.480710 | 7.3:-28420662 | MS.gene36647:CDS |
CCAGGTTCCCTTATATCATA+AGG | 0.480967 | 7.3:+28421566 | None:intergenic |
CTGTGCCCTGAAGGATGGAT+TGG | 0.481159 | 7.3:+28420667 | None:intergenic |
CAGCGATTCTCAATCGGAAT+GGG | 0.483746 | 7.3:-28427268 | MS.gene36647:CDS |
CCCGGAAATTGACGGTTGGT+TGG | 0.486337 | 7.3:+28421383 | None:intergenic |
TATGAAGCATGCGGCTTCTG+AGG | 0.487883 | 7.3:-28421426 | MS.gene36647:CDS |
TTGAACCTCTTTGAACAGAA+AGG | 0.488275 | 7.3:+28422044 | None:intergenic |
TGTCTCATCTGCTTTAGGAT+CGG | 0.488621 | 7.3:+28422841 | None:intergenic |
GATGTTGCTGGCCACCAAAT+GGG | 0.489084 | 7.3:+28421147 | None:intergenic |
GGAGTTGTGAAGGTCGGTGG+GGG | 0.491483 | 7.3:+28421522 | None:intergenic |
GAGGTTCAATTGGATCTTCA+GGG | 0.494178 | 7.3:-28422030 | MS.gene36647:CDS |
AAATCAAGTTATCTTCTTCA+GGG | 0.497846 | 7.3:+28421756 | None:intergenic |
ACTGTCATCTGATGCTTCCA+AGG | 0.499157 | 7.3:+28423189 | None:intergenic |
AAAGTTATTCATATCCCCTC+TGG | 0.499206 | 7.3:+28427347 | None:intergenic |
CTATTGAAACCACTAGCCTT+AGG | 0.500651 | 7.3:+28421797 | None:intergenic |
ATCTATTACGAGGTTTCCCA+AGG | 0.502668 | 7.3:-28421244 | MS.gene36647:CDS |
AGTTTCCAAGTGGGTTTGAT+CGG | 0.504136 | 7.3:-28427596 | MS.gene36647:CDS |
ATGAAGGAGCTGCAATCAGT+TGG | 0.505416 | 7.3:-28422073 | MS.gene36647:CDS |
CTGTTTAGTGAAAGCTCGGC+AGG | 0.505573 | 7.3:+28421947 | None:intergenic |
TTGATCGTTATCCACTTGCT+TGG | 0.506155 | 7.3:+28423354 | None:intergenic |
CCTCATCAGCTGAATCACTT+TGG | 0.507083 | 7.3:-28421497 | MS.gene36647:CDS |
CCTTCTTTCTTTGTTACAGA+AGG | 0.507789 | 7.3:-28422269 | MS.gene36647:CDS |
CCTTATGATATAAGGGAACC+TGG | 0.508824 | 7.3:-28421566 | MS.gene36647:CDS |
AGGATAGACTCGGAACTCTC+AGG | 0.509726 | 7.3:+28423106 | None:intergenic |
GAAGATAACTTGATTTCTGC+CGG | 0.511057 | 7.3:-28421749 | MS.gene36647:CDS |
AACCCAGTTACAACACTGCT+TGG | 0.512369 | 7.3:+28421332 | None:intergenic |
GACCACCTGGGTATGCGCCT+GGG | 0.514165 | 7.3:-28426961 | MS.gene36647:CDS |
CCATCGGATTACTGGGATGA+GGG | 0.514306 | 7.3:+28421207 | None:intergenic |
CAGAGACAGCGATTCTCAAT+CGG | 0.516768 | 7.3:-28427274 | MS.gene36647:CDS |
TCATGGTCATGAGCTAGACT+TGG | 0.517201 | 7.3:-28420635 | MS.gene36647:CDS |
ATCCCCTGGCTGTGCCCTGA+AGG | 0.517737 | 7.3:+28420658 | None:intergenic |
TACCTTGCAATTGCATTCCA+GGG | 0.518267 | 7.3:+28421111 | None:intergenic |
CTTATAGCTGCTAAAGTCAA+AGG | 0.519919 | 7.3:+28424732 | None:intergenic |
TTGCTCTCACTTATTGTTGG+CGG | 0.520004 | 7.3:-28422610 | MS.gene36647:CDS |
AAACGAGGACAGGGCAGAAG+AGG | 0.520289 | 7.3:-28426599 | MS.gene36647:CDS |
CAAAGCCAATCCATCCTTCA+GGG | 0.520384 | 7.3:-28420672 | MS.gene36647:CDS |
ATTCCAGGGCCACCTAAACT+AGG | 0.523489 | 7.3:+28421125 | None:intergenic |
AGCAAACTTTGAAGATTGGA+AGG | 0.524543 | 7.3:+28422805 | None:intergenic |
CGATCAACAAAATCTTCAAA+AGG | 0.526211 | 7.3:-28423338 | MS.gene36647:CDS |
TCTGAGGGCATGGTTCATCA+TGG | 0.526272 | 7.3:-28421410 | MS.gene36647:CDS |
ATGCACGGCTTCCCATTTGG+TGG | 0.526288 | 7.3:-28421158 | MS.gene36647:CDS |
TTAGGTTATGGTGATTCTCA+TGG | 0.526990 | 7.3:-28421854 | MS.gene36647:CDS |
GTTGCCACATGCTCACCAGC+GGG | 0.527738 | 7.3:+28422508 | None:intergenic |
GAGAGCAAGTCATTTGGCCT+AGG | 0.528904 | 7.3:+28422625 | None:intergenic |
TTGCAAGCTCAATGTTGGAA+AGG | 0.529138 | 7.3:-28424647 | MS.gene36647:CDS |
TTCATATAAGAACTAATATG+AGG | 0.529628 | 7.3:+28421443 | None:intergenic |
TTAGCTCCTGCGGTTGCTGG+TGG | 0.534470 | 7.3:-28420751 | MS.gene36647:intron |
AGTGAAAGCTCGGCAGGAGG+AGG | 0.534807 | 7.3:+28421953 | None:intergenic |
TGTAACAGAGGGTGATGAGC+AGG | 0.535189 | 7.3:+28421302 | None:intergenic |
CTTCTTTCTTTGTTACAGAA+GGG | 0.537066 | 7.3:-28422268 | MS.gene36647:CDS |
CATATCCCCTCTGGTTGGAG+GGG | 0.538419 | 7.3:+28427356 | None:intergenic |
TAATTGAGCTAACCTTATAT+GGG | 0.539010 | 7.3:+28426864 | None:intergenic |
CATCGTCAATAAGTGAAGAA+AGG | 0.540697 | 7.3:+28424802 | None:intergenic |
AAAGGACTGCAGAGGATCAC+CGG | 0.540765 | 7.3:+28421730 | None:intergenic |
CATCCCAGTAATCCGATGGC+TGG | 0.541345 | 7.3:-28421203 | MS.gene36647:CDS |
ATCTGTTGGAAATTCGGCTA+AGG | 0.541935 | 7.3:-28421705 | MS.gene36647:CDS |
TCGTCTGCTCCTAAGTTTCG+AGG | 0.542101 | 7.3:-28426938 | MS.gene36647:CDS |
CATGATGGACTTCTAGGTAG+TGG | 0.542210 | 7.3:-28426995 | MS.gene36647:CDS |
CAGCCTCTTTCGAATTGATG+AGG | 0.542510 | 7.3:-28424881 | MS.gene36647:CDS |
CATGGTCATGAGCTAGACTT+GGG | 0.542533 | 7.3:-28420634 | MS.gene36647:CDS |
GCCATCGGATTACTGGGATG+AGG | 0.546106 | 7.3:+28421206 | None:intergenic |
AACACTGAAGGAGTAACTAC+TGG | 0.546894 | 7.3:-28422187 | MS.gene36647:CDS |
TTGTTGGCGGTGAAAAGGGC+GGG | 0.547662 | 7.3:-28422597 | MS.gene36647:CDS |
TAGCTACCTCTGGTATCTCC+AGG | 0.552688 | 7.3:+28423421 | None:intergenic |
ATGTCTGTTTAGTGAAAGCT+CGG | 0.553240 | 7.3:+28421943 | None:intergenic |
ACAGCGATTCTCAATCGGAA+TGG | 0.553857 | 7.3:-28427269 | MS.gene36647:CDS |
CTCCTGCGGTTGCTGGTGGA+AGG | 0.554479 | 7.3:-28420747 | MS.gene36647:CDS |
ACTGAATACATAGCTACCTC+TGG | 0.554879 | 7.3:+28423411 | None:intergenic |
ATTCCACTGTGAAGCATCGA+TGG | 0.555762 | 7.3:+28421821 | None:intergenic |
ATGAAGCATGCGGCTTCTGA+GGG | 0.556349 | 7.3:-28421425 | MS.gene36647:CDS |
ATACCAGCCATCGGATTACT+GGG | 0.556663 | 7.3:+28421200 | None:intergenic |
CAGCAACATCCTAGTTTAGG+TGG | 0.558183 | 7.3:-28421134 | MS.gene36647:CDS |
ACATTGAGCTTGCAAAACCT+GGG | 0.558692 | 7.3:+28424655 | None:intergenic |
CAAATAGATTTGAAGAGCAG+TGG | 0.558906 | 7.3:-28421877 | MS.gene36647:CDS |
AAAATTCGGTGCAACATGAT+GGG | 0.559019 | 7.3:+28422549 | None:intergenic |
ATAAATCCTGAAAATAAAGA+AGG | 0.559114 | 7.3:-28423388 | MS.gene36647:CDS |
GCTCATGACCATGAATCCCC+TGG | 0.559267 | 7.3:+28420644 | None:intergenic |
CCCTCATCCCAGTAATCCGA+TGG | 0.560269 | 7.3:-28421207 | MS.gene36647:CDS |
CCTAGAAGTCCATCATGCTC+AGG | 0.561191 | 7.3:+28427001 | None:intergenic |
CCTCGTAATAGATGAGGTGG+AGG | 0.562711 | 7.3:+28421254 | None:intergenic |
ATCCTAAAGCAGATGAGACA+TGG | 0.563263 | 7.3:-28422838 | MS.gene36647:CDS |
TTCCTTCCACCAGCAACCGC+AGG | 0.564156 | 7.3:+28420745 | None:intergenic |
ATCCTTCAGGGCACAGCCAG+GGG | 0.564325 | 7.3:-28420660 | MS.gene36647:CDS |
AACCAAGCAGTGTTGTAACT+GGG | 0.566590 | 7.3:-28421334 | MS.gene36647:CDS |
TATGGGCGAGGAGGATGATA+CGG | 0.568567 | 7.3:+28426881 | None:intergenic |
GAAGAGGAAAGAAAGAGAAG+AGG | 0.570333 | 7.3:-28426583 | MS.gene36647:intron |
AAGACTTTGGTGCAAAGACT+GGG | 0.570412 | 7.3:-28422327 | MS.gene36647:CDS |
CATCCTTCAGGGCACAGCCA+GGG | 0.571701 | 7.3:-28420661 | MS.gene36647:CDS |
AGTGATTCAGCTGATGAGGT+TGG | 0.572491 | 7.3:+28421501 | None:intergenic |
GCTTCACAGTGGAATTCCTA+AGG | 0.572729 | 7.3:-28421813 | MS.gene36647:CDS |
TTATTCATATCCCCTCTGGT+TGG | 0.573170 | 7.3:+28427351 | None:intergenic |
GACGACCCAGGCGCATACCC+AGG | 0.574337 | 7.3:+28426956 | None:intergenic |
TCAATGTTGGAAAGGAATAC+GGG | 0.576407 | 7.3:-28424639 | MS.gene36647:CDS |
CTTGCAATGATCTACGAGGC+TGG | 0.578206 | 7.3:+28427026 | None:intergenic |
GCTCATTAGATCGATTTGGC+TGG | 0.578244 | 7.3:+28426903 | None:intergenic |
TGAGTGATCAACTAAGAAAG+AGG | 0.579447 | 7.3:-28423228 | MS.gene36647:CDS |
CTGGATCGACAGAGAAGTAC+CGG | 0.580183 | 7.3:-28427423 | MS.gene36647:CDS |
CTCAAACACTCATGCAGCAG+AGG | 0.580829 | 7.3:-28424604 | MS.gene36647:intron |
GAATCCAGTTGATTCAACAT+TGG | 0.580957 | 7.3:+28421473 | None:intergenic |
GCACCCCTTTCTGTTCAAAG+AGG | 0.581665 | 7.3:-28422049 | MS.gene36647:CDS |
GAGCTAACCTTATATGGGCG+AGG | 0.582436 | 7.3:+28426869 | None:intergenic |
CTAGGTGTCAAGTCATCCAT+CGG | 0.582629 | 7.3:+28422643 | None:intergenic |
GCATGCGGCTTCTGAGGGCA+TGG | 0.583557 | 7.3:-28421420 | MS.gene36647:CDS |
GTTCATCCCCTCCAACCAGA+GGG | 0.583668 | 7.3:-28427362 | MS.gene36647:CDS |
CGATGGATGACTTGACACCT+AGG | 0.584610 | 7.3:-28422642 | MS.gene36647:CDS |
CCTTCTGTAACAAAGAAAGA+AGG | 0.584776 | 7.3:+28422269 | None:intergenic |
TGGAGTTGTGAAGGTCGGTG+GGG | 0.585709 | 7.3:+28421521 | None:intergenic |
TGCATGACCATCAATTGAAG+TGG | 0.587415 | 7.3:+28422300 | None:intergenic |
AAAATTACCAACCAAGCAAG+TGG | 0.588223 | 7.3:-28423365 | MS.gene36647:CDS |
TGTTGCCACATGCTCACCAG+CGG | 0.588771 | 7.3:+28422507 | None:intergenic |
TTTAAATTTATCATATGCTG+CGG | 0.590462 | 7.3:-28423275 | MS.gene36647:CDS |
ATTTCCCGGAAATTGACGGT+TGG | 0.590872 | 7.3:+28421379 | None:intergenic |
CCTCCACCTCATCTATTACG+AGG | 0.592361 | 7.3:-28421254 | MS.gene36647:CDS |
CAGTCAATTCTATCACAAGT+TGG | 0.594227 | 7.3:-28422388 | MS.gene36647:CDS |
ATTGTTGGCGGTGAAAAGGG+CGG | 0.596760 | 7.3:-28422598 | MS.gene36647:CDS |
GTAATAGATGAGGTGGAGGA+AGG | 0.596835 | 7.3:+28421258 | None:intergenic |
AGTGGAATTCCTAAGGCTAG+TGG | 0.597076 | 7.3:-28421806 | MS.gene36647:CDS |
TGCTGAAGTAAAAGGAAAGG+AGG | 0.597363 | 7.3:-28423149 | MS.gene36647:CDS |
GTAAAAGGAAAGGAGGCTGT+TGG | 0.598324 | 7.3:-28423142 | MS.gene36647:CDS |
GAACCTCTTTGAACAGAAAG+GGG | 0.598984 | 7.3:+28422046 | None:intergenic |
TTGCAAGGTCCTGAGCATGA+TGG | 0.599793 | 7.3:-28427010 | MS.gene36647:CDS |
TAATGCTGAAGTAAAAGGAA+AGG | 0.600440 | 7.3:-28423152 | MS.gene36647:CDS |
CATATCAACTAGTATTGTTG+AGG | 0.601051 | 7.3:-28423044 | MS.gene36647:intron |
TTACAACAGATGCACATGCA+AGG | 0.601162 | 7.3:-28421284 | MS.gene36647:CDS |
GGCCCTGGAATGCAATTGCA+AGG | 0.602349 | 7.3:-28421113 | MS.gene36647:intron |
TTTGAAGATTGGAAGGCATG+TGG | 0.603658 | 7.3:+28422812 | None:intergenic |
AAACCTCGTAATAGATGAGG+TGG | 0.606264 | 7.3:+28421251 | None:intergenic |
CCAAAGTGATTCAGCTGATG+AGG | 0.606783 | 7.3:+28421497 | None:intergenic |
GTCTTGCTGAAGCATGTGGA+AGG | 0.606912 | 7.3:+28424688 | None:intergenic |
TACAACAGATGCACATGCAA+GGG | 0.611737 | 7.3:-28421283 | MS.gene36647:CDS |
TCACTAAACAGACATGGAAG+TGG | 0.613172 | 7.3:-28421935 | MS.gene36647:CDS |
GAGGTTGGAGTTGTGAAGGT+CGG | 0.613220 | 7.3:+28421516 | None:intergenic |
GACATGGTGCACAACACTGA+AGG | 0.614444 | 7.3:-28422199 | MS.gene36647:CDS |
TACTCGAAGCAATGATTCAG+TGG | 0.616577 | 7.3:-28424763 | MS.gene36647:CDS |
TATTGTAATCCTGAACCCGC+TGG | 0.616833 | 7.3:-28422523 | MS.gene36647:CDS |
CATCGGATTACTGGGATGAG+GGG | 0.617494 | 7.3:+28421208 | None:intergenic |
ATCATCCAGAAGCACTTCAG+AGG | 0.620079 | 7.3:-28420723 | MS.gene36647:CDS |
AACTTAGGAGCAGACGACCC+AGG | 0.620756 | 7.3:+28426944 | None:intergenic |
AATACTAGTTGATATGCCAC+TGG | 0.621435 | 7.3:+28423051 | None:intergenic |
TAATGCAGAAAAGAAGCCGA+TGG | 0.623251 | 7.3:-28422659 | MS.gene36647:intron |
TCTTGCATAATACCAGCCAT+CGG | 0.625481 | 7.3:+28421191 | None:intergenic |
TAGTTCTTATATGAAGCATG+CGG | 0.630801 | 7.3:-28421435 | MS.gene36647:CDS |
CGACTTATGAGAAATCAAGA+AGG | 0.632887 | 7.3:-28421608 | MS.gene36647:CDS |
ATCGGATTACTGGGATGAGG+GGG | 0.633460 | 7.3:+28421209 | None:intergenic |
GAATCCAGAAAAGAGTAAAG+CGG | 0.633508 | 7.3:-28424832 | MS.gene36647:CDS |
GGAGTGTACAAACGAGGACA+GGG | 0.634080 | 7.3:-28426608 | MS.gene36647:CDS |
AGGTTCAATTGGATCTTCAG+GGG | 0.635641 | 7.3:-28422029 | MS.gene36647:CDS |
TGTTCGAGATTCTACTGACA+TGG | 0.638427 | 7.3:-28422215 | MS.gene36647:CDS |
CAAGAACCAAACCCAATGCA+CGG | 0.638464 | 7.3:-28421173 | MS.gene36647:CDS |
CAAATTTCTTGATAATCCAG+AGG | 0.639159 | 7.3:-28422164 | MS.gene36647:CDS |
AACAGAGGGTGATGAGCAGG+AGG | 0.645933 | 7.3:+28421305 | None:intergenic |
TTCTTTGGAGTGTACAAACG+AGG | 0.645940 | 7.3:-28426614 | MS.gene36647:CDS |
CTGCTTGGTTGATGAAAAGG+AGG | 0.646171 | 7.3:+28421347 | None:intergenic |
AGTGGTCTTGCTGAAGCATG+TGG | 0.647419 | 7.3:+28424684 | None:intergenic |
TGAACCCGCTGGTGAGCATG+TGG | 0.647544 | 7.3:-28422512 | MS.gene36647:CDS |
GGGAAACCTCGTAATAGATG+AGG | 0.647588 | 7.3:+28421248 | None:intergenic |
AGTGACCGATCAAACCCACT+TGG | 0.648318 | 7.3:+28427591 | None:intergenic |
ACTATGTGTTGACAGAGCAC+CGG | 0.649813 | 7.3:+28427404 | None:intergenic |
TGATGAGGTTGGAGTTGTGA+AGG | 0.650251 | 7.3:+28421512 | None:intergenic |
TTAGTTTCTCTACGCGAGTG+AGG | 0.650747 | 7.3:+28426664 | None:intergenic |
GAGCTTTCACTAAACAGACA+TGG | 0.658732 | 7.3:-28421941 | MS.gene36647:CDS |
CATTGAGCTTGCAAAACCTG+GGG | 0.660138 | 7.3:+28424656 | None:intergenic |
CTATTACGAGGTTTCCCAAG+GGG | 0.661354 | 7.3:-28421242 | MS.gene36647:CDS |
AAGCTTGTATAGGATAGACT+CGG | 0.661638 | 7.3:+28423096 | None:intergenic |
TTTGCAAAGAGTTTCCAAGT+GGG | 0.664496 | 7.3:-28427605 | MS.gene36647:CDS |
AGTTCATCCCCTCCAACCAG+AGG | 0.664892 | 7.3:-28427363 | MS.gene36647:CDS |
TCTATTACGAGGTTTCCCAA+GGG | 0.667166 | 7.3:-28421243 | MS.gene36647:CDS |
TTTAGTGAAAGCTCGGCAGG+AGG | 0.668631 | 7.3:+28421950 | None:intergenic |
CTTATATCATAAGGACCACG+AGG | 0.671877 | 7.3:+28421575 | None:intergenic |
CAGCCTCGTAGATCATTGCA+AGG | 0.673973 | 7.3:-28427025 | MS.gene36647:CDS |
CTAACCTTATATGGGCGAGG+AGG | 0.675328 | 7.3:+28426872 | None:intergenic |
ATTTGCAAAGAGTTTCCAAG+TGG | 0.675462 | 7.3:-28427606 | MS.gene36647:CDS |
TCGAAGCAATGATTCAGTGG+AGG | 0.680467 | 7.3:-28424760 | MS.gene36647:CDS |
TGTGCATCTGTTGTAACAGA+GGG | 0.689797 | 7.3:+28421291 | None:intergenic |
TCAAGTTATCTTCTTCAGGG+AGG | 0.696245 | 7.3:+28421759 | None:intergenic |
GAAGGTCAAGCATACCCTCG+TGG | 0.700243 | 7.3:-28421590 | MS.gene36647:CDS |
ATGATGGGTAGTCTCTACAC+CGG | 0.700413 | 7.3:+28422564 | None:intergenic |
ATGTGCATCTGTTGTAACAG+AGG | 0.708955 | 7.3:+28421290 | None:intergenic |
GACCCAGGCGCATACCCAGG+TGG | 0.710888 | 7.3:+28426959 | None:intergenic |
TTCATCCCCTCCAACCAGAG+GGG | 0.715029 | 7.3:-28427361 | MS.gene36647:CDS |
AATGCTTCAACAATAACCAG+TGG | 0.715232 | 7.3:-28423067 | MS.gene36647:CDS |
TCTTGCTGAAGCATGTGGAA+GGG | 0.717277 | 7.3:+28424689 | None:intergenic |
CTTGTGCCTGGAGATACCAG+AGG | 0.725088 | 7.3:-28423427 | MS.gene36647:CDS |
GGACCTTGCAATGATCTACG+AGG | 0.729062 | 7.3:+28427022 | None:intergenic |
ATTGAGCTTGCAAAACCTGG+GGG | 0.731235 | 7.3:+28424657 | None:intergenic |
AATCCATCGATGCTTCACAG+TGG | 0.764077 | 7.3:-28421824 | MS.gene36647:CDS |
TTATATCATAAGGACCACGA+GGG | 0.766184 | 7.3:+28421576 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 28420618 | 28427850 | 28420618 | ID=MS.gene36647 |
chr7.3 | mRNA | 28420618 | 28427850 | 28420618 | ID=MS.gene36647.t1;Parent=MS.gene36647 |
chr7.3 | exon | 28427789 | 28427850 | 28427789 | ID=MS.gene36647.t1.exon1;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28427789 | 28427850 | 28427789 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28427585 | 28427683 | 28427585 | ID=MS.gene36647.t1.exon2;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28427585 | 28427683 | 28427585 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28427262 | 28427464 | 28427262 | ID=MS.gene36647.t1.exon3;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28427262 | 28427464 | 28427262 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28426877 | 28427070 | 28426877 | ID=MS.gene36647.t1.exon4;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28426877 | 28427070 | 28426877 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28426584 | 28426689 | 28426584 | ID=MS.gene36647.t1.exon5;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28426584 | 28426689 | 28426584 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28424605 | 28424900 | 28424605 | ID=MS.gene36647.t1.exon6;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28424605 | 28424900 | 28424605 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28423045 | 28423458 | 28423045 | ID=MS.gene36647.t1.exon7;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28423045 | 28423458 | 28423045 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28422786 | 28422867 | 28422786 | ID=MS.gene36647.t1.exon8;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28422786 | 28422867 | 28422786 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28421114 | 28422673 | 28421114 | ID=MS.gene36647.t1.exon9;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28421114 | 28422673 | 28421114 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
chr7.3 | exon | 28420618 | 28420769 | 28420618 | ID=MS.gene36647.t1.exon10;Parent=MS.gene36647.t1 |
chr7.3 | CDS | 28420618 | 28420769 | 28420618 | ID=cds.MS.gene36647.t1;Parent=MS.gene36647.t1 |
Gene Sequence |
Protein sequence |