Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36713.t1 | XP_013466155.1 | 93.3 | 120 | 8 | 0 | 1 | 120 | 1 | 120 | 5.50E-56 | 227.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36713.t1 | Q8GY84 | 54.1 | 122 | 54 | 1 | 1 | 120 | 258 | 379 | 2.4e-28 | 127.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36713.t1 | A0A072VDU5 | 93.3 | 120 | 8 | 0 | 1 | 120 | 1 | 120 | 4.0e-56 | 227.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene36713.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057906 | MS.gene36713 | 0.861024 | 1.37E-63 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36713.t1 | MTR_1g023070 | 93.333 | 120 | 8 | 0 | 1 | 120 | 1 | 120 | 3.54e-72 | 218 |
MS.gene36713.t1 | MTR_1g023070 | 93.333 | 120 | 8 | 0 | 1 | 120 | 1 | 120 | 8.51e-72 | 216 |
MS.gene36713.t1 | MTR_4g098870 | 93.814 | 97 | 6 | 0 | 125 | 221 | 285 | 381 | 8.08e-59 | 194 |
MS.gene36713.t1 | MTR_4g098870 | 93.814 | 97 | 6 | 0 | 125 | 221 | 285 | 381 | 1.07e-58 | 194 |
MS.gene36713.t1 | MTR_4g098870 | 93.814 | 97 | 6 | 0 | 125 | 221 | 305 | 401 | 1.15e-58 | 194 |
MS.gene36713.t1 | MTR_4g098870 | 93.814 | 97 | 6 | 0 | 125 | 221 | 305 | 401 | 1.44e-58 | 194 |
MS.gene36713.t1 | MTR_4g098870 | 93.814 | 97 | 6 | 0 | 125 | 221 | 324 | 420 | 2.01e-58 | 194 |
MS.gene36713.t1 | MTR_1g009617 | 88.421 | 95 | 11 | 0 | 26 | 120 | 167 | 261 | 6.12e-55 | 180 |
MS.gene36713.t1 | MTR_5g069330 | 71.429 | 119 | 33 | 1 | 1 | 119 | 244 | 361 | 5.66e-54 | 178 |
MS.gene36713.t1 | MTR_5g069330 | 71.429 | 119 | 33 | 1 | 1 | 119 | 248 | 365 | 5.81e-54 | 178 |
MS.gene36713.t1 | MTR_7g056830 | 59.836 | 122 | 47 | 1 | 1 | 120 | 248 | 369 | 1.63e-41 | 146 |
MS.gene36713.t1 | MTR_6g082080 | 59.836 | 122 | 47 | 1 | 1 | 120 | 248 | 369 | 1.81e-41 | 146 |
MS.gene36713.t1 | MTR_5g014040 | 77.174 | 92 | 21 | 0 | 130 | 221 | 291 | 382 | 1.04e-40 | 145 |
MS.gene36713.t1 | MTR_5g014040 | 73.196 | 97 | 21 | 1 | 130 | 221 | 251 | 347 | 1.17e-38 | 140 |
MS.gene36713.t1 | MTR_5g014040 | 73.196 | 97 | 21 | 1 | 130 | 221 | 291 | 387 | 2.07e-38 | 139 |
MS.gene36713.t1 | MTR_1g022305 | 64.286 | 84 | 29 | 1 | 37 | 120 | 221 | 303 | 7.03e-29 | 112 |
MS.gene36713.t1 | MTR_4g078810 | 58.667 | 75 | 31 | 0 | 147 | 221 | 155 | 229 | 5.34e-27 | 107 |
MS.gene36713.t1 | MTR_2g090675 | 63.636 | 66 | 24 | 0 | 147 | 212 | 158 | 223 | 8.13e-26 | 103 |
MS.gene36713.t1 | MTR_2g066050 | 35.714 | 126 | 68 | 2 | 5 | 117 | 298 | 423 | 4.01e-20 | 88.6 |
MS.gene36713.t1 | MTR_2g450070 | 58.462 | 65 | 27 | 0 | 146 | 210 | 209 | 273 | 6.00e-20 | 88.2 |
MS.gene36713.t1 | MTR_2g450070 | 58.462 | 65 | 27 | 0 | 146 | 210 | 209 | 273 | 6.29e-20 | 88.2 |
MS.gene36713.t1 | MTR_4g121020 | 63.333 | 60 | 22 | 0 | 149 | 208 | 214 | 273 | 3.88e-19 | 85.9 |
MS.gene36713.t1 | MTR_4g121020 | 63.333 | 60 | 22 | 0 | 149 | 208 | 214 | 273 | 3.88e-19 | 85.9 |
MS.gene36713.t1 | MTR_3g106220 | 59.091 | 66 | 27 | 0 | 143 | 208 | 191 | 256 | 5.08e-19 | 85.5 |
MS.gene36713.t1 | MTR_4g121020 | 63.333 | 60 | 22 | 0 | 149 | 208 | 110 | 169 | 7.01e-19 | 85.1 |
MS.gene36713.t1 | MTR_4g131570 | 62.712 | 59 | 22 | 0 | 145 | 203 | 198 | 256 | 6.93e-18 | 82.0 |
MS.gene36713.t1 | MTR_1g032570 | 54.795 | 73 | 32 | 1 | 149 | 220 | 199 | 271 | 1.44e-17 | 81.3 |
MS.gene36713.t1 | MTR_1g032570 | 54.795 | 73 | 32 | 1 | 149 | 220 | 130 | 202 | 1.50e-17 | 80.9 |
MS.gene36713.t1 | MTR_4g131600 | 50.000 | 82 | 28 | 2 | 140 | 221 | 194 | 262 | 4.06e-17 | 79.7 |
MS.gene36713.t1 | MTR_7g089010 | 46.988 | 83 | 39 | 1 | 122 | 204 | 68 | 145 | 7.97e-17 | 77.8 |
MS.gene36713.t1 | MTR_1g013170 | 54.545 | 66 | 30 | 0 | 148 | 213 | 189 | 254 | 1.33e-16 | 78.2 |
MS.gene36713.t1 | MTR_4g064730 | 60.714 | 56 | 22 | 0 | 149 | 204 | 130 | 185 | 1.39e-16 | 77.0 |
MS.gene36713.t1 | MTR_4g131580 | 63.793 | 58 | 21 | 0 | 146 | 203 | 196 | 253 | 1.55e-16 | 78.2 |
MS.gene36713.t1 | MTR_2g034960 | 55.000 | 60 | 27 | 0 | 149 | 208 | 210 | 269 | 2.23e-16 | 77.8 |
MS.gene36713.t1 | MTR_8g079940 | 56.716 | 67 | 29 | 0 | 149 | 215 | 208 | 274 | 2.39e-16 | 77.4 |
MS.gene36713.t1 | MTR_7g117705 | 57.377 | 61 | 26 | 0 | 148 | 208 | 189 | 249 | 4.05e-16 | 76.6 |
MS.gene36713.t1 | MTR_1g013180 | 59.649 | 57 | 23 | 0 | 148 | 204 | 340 | 396 | 5.17e-16 | 76.6 |
MS.gene36713.t1 | MTR_7g026400 | 53.968 | 63 | 29 | 0 | 149 | 211 | 156 | 218 | 5.48e-16 | 76.6 |
MS.gene36713.t1 | MTR_3g102590 | 57.377 | 61 | 25 | 1 | 143 | 203 | 137 | 196 | 1.08e-15 | 73.6 |
MS.gene36713.t1 | MTR_3g102600 | 54.545 | 55 | 25 | 0 | 149 | 203 | 82 | 136 | 1.94e-15 | 71.6 |
MS.gene36713.t1 | MTR_4g021790 | 49.296 | 71 | 36 | 0 | 134 | 204 | 152 | 222 | 2.85e-15 | 73.2 |
MS.gene36713.t1 | MTR_4g086835 | 43.056 | 72 | 41 | 0 | 137 | 208 | 261 | 332 | 3.07e-15 | 73.9 |
MS.gene36713.t1 | MTR_3g102600 | 54.545 | 55 | 25 | 0 | 149 | 203 | 131 | 185 | 3.32e-15 | 72.0 |
MS.gene36713.t1 | MTR_3g086100 | 57.627 | 59 | 25 | 0 | 146 | 204 | 124 | 182 | 6.41e-15 | 73.2 |
MS.gene36713.t1 | MTR_3g086100 | 57.627 | 59 | 25 | 0 | 146 | 204 | 195 | 253 | 6.71e-15 | 73.2 |
MS.gene36713.t1 | MTR_4g021760 | 55.556 | 54 | 24 | 0 | 149 | 202 | 168 | 221 | 1.17e-14 | 71.6 |
MS.gene36713.t1 | MTR_1g093080 | 43.210 | 81 | 45 | 1 | 127 | 206 | 188 | 268 | 1.48e-14 | 72.0 |
MS.gene36713.t1 | MTR_1g053830 | 40.909 | 88 | 45 | 3 | 128 | 214 | 2 | 83 | 9.43e-14 | 65.1 |
MS.gene36713.t1 | MTR_4g086835 | 42.466 | 73 | 41 | 1 | 137 | 208 | 261 | 333 | 1.14e-13 | 69.7 |
MS.gene36713.t1 | MTR_4g021855 | 57.143 | 56 | 24 | 0 | 149 | 204 | 167 | 222 | 1.26e-13 | 68.9 |
MS.gene36713.t1 | MTR_3g102600 | 50.943 | 53 | 26 | 0 | 149 | 201 | 82 | 134 | 1.79e-13 | 65.5 |
MS.gene36713.t1 | MTR_1g080330 | 56.897 | 58 | 24 | 1 | 146 | 202 | 171 | 228 | 1.98e-13 | 68.2 |
MS.gene36713.t1 | MTR_4g113140 | 34.862 | 109 | 64 | 3 | 108 | 210 | 189 | 296 | 2.44e-13 | 68.6 |
MS.gene36713.t1 | MTR_1g080330 | 57.895 | 57 | 23 | 1 | 147 | 202 | 172 | 228 | 2.77e-13 | 68.2 |
MS.gene36713.t1 | MTR_5g017980 | 50.000 | 60 | 30 | 0 | 149 | 208 | 191 | 250 | 2.83e-13 | 68.2 |
MS.gene36713.t1 | MTR_5g017980 | 50.000 | 60 | 30 | 0 | 149 | 208 | 192 | 251 | 2.84e-13 | 68.2 |
MS.gene36713.t1 | MTR_3g102600 | 50.943 | 53 | 26 | 0 | 149 | 201 | 131 | 183 | 3.01e-13 | 66.2 |
MS.gene36713.t1 | MTR_7g098250 | 32.143 | 168 | 88 | 7 | 47 | 202 | 162 | 315 | 3.06e-13 | 68.6 |
MS.gene36713.t1 | MTR_3g102590 | 56.140 | 57 | 24 | 1 | 143 | 199 | 137 | 192 | 4.29e-13 | 65.9 |
MS.gene36713.t1 | MTR_5g054300 | 45.570 | 79 | 41 | 2 | 129 | 206 | 178 | 255 | 6.76e-13 | 67.0 |
MS.gene36713.t1 | MTR_7g076820 | 29.412 | 119 | 82 | 1 | 6 | 122 | 389 | 507 | 6.83e-13 | 67.4 |
MS.gene36713.t1 | MTR_7g076830 | 28.571 | 119 | 83 | 1 | 6 | 122 | 382 | 500 | 1.08e-12 | 67.0 |
MS.gene36713.t1 | MTR_7g076800 | 28.571 | 119 | 83 | 1 | 6 | 122 | 380 | 498 | 1.20e-12 | 66.6 |
MS.gene36713.t1 | MTR_0450s0040 | 46.032 | 63 | 34 | 0 | 149 | 211 | 168 | 230 | 1.20e-12 | 66.2 |
MS.gene36713.t1 | MTR_3g071620 | 30.172 | 116 | 75 | 2 | 7 | 116 | 280 | 395 | 1.22e-12 | 66.6 |
MS.gene36713.t1 | MTR_5g027840 | 38.028 | 71 | 44 | 0 | 22 | 92 | 371 | 441 | 1.61e-12 | 66.2 |
MS.gene36713.t1 | MTR_5g041350 | 45.588 | 68 | 36 | 1 | 150 | 216 | 15 | 82 | 2.58e-12 | 65.5 |
MS.gene36713.t1 | MTR_7g115530 | 55.357 | 56 | 24 | 1 | 148 | 202 | 216 | 271 | 3.26e-12 | 64.7 |
MS.gene36713.t1 | MTR_7g115530 | 55.357 | 56 | 24 | 1 | 148 | 202 | 216 | 271 | 4.14e-12 | 64.7 |
MS.gene36713.t1 | MTR_6g045327 | 38.356 | 73 | 42 | 1 | 149 | 221 | 171 | 240 | 4.45e-12 | 64.7 |
MS.gene36713.t1 | MTR_7g115530 | 55.357 | 56 | 24 | 1 | 148 | 202 | 216 | 271 | 4.89e-12 | 64.3 |
MS.gene36713.t1 | MTR_2g039960 | 33.735 | 83 | 53 | 1 | 46 | 126 | 322 | 404 | 4.90e-12 | 64.7 |
MS.gene36713.t1 | MTR_2g055850 | 32.075 | 106 | 69 | 1 | 7 | 109 | 341 | 446 | 5.11e-12 | 64.7 |
MS.gene36713.t1 | MTR_7g115530 | 55.357 | 56 | 24 | 1 | 148 | 202 | 216 | 271 | 7.50e-12 | 64.3 |
MS.gene36713.t1 | MTR_3g107420 | 34.314 | 102 | 65 | 1 | 7 | 106 | 292 | 393 | 9.69e-12 | 63.9 |
MS.gene36713.t1 | MTR_1g012420 | 34.314 | 102 | 65 | 1 | 7 | 106 | 292 | 393 | 9.78e-12 | 63.9 |
MS.gene36713.t1 | MTR_5g017980 | 49.180 | 61 | 30 | 1 | 149 | 208 | 192 | 252 | 1.14e-11 | 63.5 |
MS.gene36713.t1 | MTR_4g010565 | 34.314 | 102 | 65 | 1 | 7 | 106 | 369 | 470 | 1.38e-11 | 63.5 |
MS.gene36713.t1 | MTR_8g105600 | 55.769 | 52 | 23 | 0 | 153 | 204 | 190 | 241 | 1.57e-11 | 63.5 |
MS.gene36713.t1 | MTR_4g021845 | 50.980 | 51 | 25 | 0 | 149 | 199 | 167 | 217 | 2.26e-11 | 61.6 |
MS.gene36713.t1 | MTR_4g059460 | 24.725 | 182 | 122 | 3 | 26 | 205 | 384 | 552 | 2.33e-11 | 63.2 |
MS.gene36713.t1 | MTR_6g032990 | 49.123 | 57 | 28 | 1 | 150 | 205 | 42 | 98 | 2.45e-11 | 62.8 |
MS.gene36713.t1 | MTR_2g086450 | 49.123 | 57 | 28 | 1 | 150 | 205 | 45 | 101 | 2.83e-11 | 62.4 |
MS.gene36713.t1 | MTR_2g027860 | 54.386 | 57 | 25 | 1 | 150 | 205 | 49 | 105 | 5.51e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36713.t1 | AT5G60990 | 54.098 | 122 | 54 | 1 | 1 | 120 | 258 | 379 | 8.39e-38 | 137 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 9.46e-30 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 9.46e-30 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 9.46e-30 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 9.46e-30 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 9.46e-30 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 9.46e-30 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 1.20e-29 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 1.20e-29 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 1.20e-29 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 1.20e-29 | 115 |
MS.gene36713.t1 | AT4G18020 | 70.513 | 78 | 20 | 2 | 145 | 221 | 293 | 368 | 1.20e-29 | 115 |
MS.gene36713.t1 | AT5G44190 | 64.865 | 74 | 26 | 0 | 148 | 221 | 145 | 218 | 2.44e-27 | 107 |
MS.gene36713.t1 | AT5G44190 | 64.865 | 74 | 26 | 0 | 148 | 221 | 145 | 218 | 3.03e-27 | 107 |
MS.gene36713.t1 | AT2G20570 | 68.182 | 66 | 21 | 0 | 147 | 212 | 150 | 215 | 2.17e-26 | 105 |
MS.gene36713.t1 | AT2G20570 | 70.968 | 62 | 18 | 0 | 151 | 212 | 170 | 231 | 2.50e-25 | 102 |
MS.gene36713.t1 | AT5G58080 | 63.492 | 63 | 23 | 0 | 146 | 208 | 190 | 252 | 6.49e-21 | 90.9 |
MS.gene36713.t1 | AT1G16280 | 37.288 | 118 | 72 | 1 | 5 | 120 | 304 | 421 | 2.00e-20 | 89.4 |
MS.gene36713.t1 | AT3G16857 | 57.353 | 68 | 29 | 0 | 141 | 208 | 228 | 295 | 9.71e-19 | 84.7 |
MS.gene36713.t1 | AT3G16857 | 57.353 | 68 | 29 | 0 | 141 | 208 | 228 | 295 | 1.05e-18 | 84.7 |
MS.gene36713.t1 | AT3G16857 | 57.353 | 68 | 29 | 0 | 141 | 208 | 158 | 225 | 1.34e-18 | 84.3 |
MS.gene36713.t1 | AT2G40970 | 50.649 | 77 | 38 | 0 | 132 | 208 | 87 | 163 | 4.10e-18 | 80.5 |
MS.gene36713.t1 | AT2G25180 | 63.934 | 61 | 22 | 0 | 148 | 208 | 193 | 253 | 5.62e-18 | 82.4 |
MS.gene36713.t1 | AT2G01760 | 57.143 | 63 | 27 | 0 | 146 | 208 | 131 | 193 | 5.78e-18 | 81.3 |
MS.gene36713.t1 | AT2G01760 | 57.143 | 63 | 27 | 0 | 146 | 208 | 196 | 258 | 8.29e-18 | 81.3 |
MS.gene36713.t1 | AT2G01760 | 57.143 | 63 | 27 | 0 | 146 | 208 | 224 | 286 | 8.90e-18 | 81.3 |
MS.gene36713.t1 | AT5G59570 | 38.596 | 114 | 63 | 2 | 95 | 208 | 93 | 199 | 9.52e-18 | 80.5 |
MS.gene36713.t1 | AT5G59570 | 38.596 | 114 | 63 | 2 | 95 | 208 | 93 | 199 | 9.52e-18 | 80.5 |
MS.gene36713.t1 | AT5G05090 | 60.714 | 56 | 22 | 0 | 149 | 204 | 80 | 135 | 2.38e-17 | 78.6 |
MS.gene36713.t1 | AT3G10760 | 60.714 | 56 | 22 | 0 | 149 | 204 | 104 | 159 | 2.73e-17 | 79.3 |
MS.gene36713.t1 | AT3G46640 | 60.714 | 56 | 22 | 0 | 149 | 204 | 143 | 198 | 9.90e-17 | 77.8 |
MS.gene36713.t1 | AT3G46640 | 60.714 | 56 | 22 | 0 | 149 | 204 | 143 | 198 | 9.90e-17 | 77.8 |
MS.gene36713.t1 | AT3G46640 | 60.714 | 56 | 22 | 0 | 149 | 204 | 143 | 198 | 1.02e-16 | 77.8 |
MS.gene36713.t1 | AT4G31920 | 53.030 | 66 | 31 | 0 | 138 | 203 | 171 | 236 | 1.00e-15 | 75.9 |
MS.gene36713.t1 | AT1G25550 | 56.452 | 62 | 25 | 2 | 146 | 206 | 206 | 266 | 2.50e-15 | 73.9 |
MS.gene36713.t1 | AT3G62670 | 43.925 | 107 | 48 | 6 | 124 | 219 | 183 | 288 | 2.50e-14 | 71.6 |
MS.gene36713.t1 | AT1G31970 | 36.264 | 91 | 56 | 1 | 19 | 107 | 382 | 472 | 2.90e-14 | 71.6 |
MS.gene36713.t1 | AT2G03500 | 49.254 | 67 | 32 | 2 | 145 | 210 | 229 | 294 | 7.63e-14 | 70.1 |
MS.gene36713.t1 | AT1G68670 | 54.237 | 59 | 26 | 1 | 149 | 206 | 214 | 272 | 7.83e-14 | 69.7 |
MS.gene36713.t1 | AT5G07210 | 51.667 | 60 | 29 | 0 | 149 | 208 | 229 | 288 | 9.31e-14 | 70.1 |
MS.gene36713.t1 | AT5G07210 | 51.667 | 60 | 29 | 0 | 149 | 208 | 221 | 280 | 9.54e-14 | 70.1 |
MS.gene36713.t1 | AT4G37180 | 50.667 | 75 | 32 | 2 | 133 | 206 | 197 | 267 | 1.01e-13 | 69.7 |
MS.gene36713.t1 | AT4G37180 | 50.667 | 75 | 32 | 2 | 133 | 206 | 204 | 274 | 1.12e-13 | 69.3 |
MS.gene36713.t1 | AT1G67710 | 64.815 | 54 | 18 | 1 | 152 | 204 | 121 | 174 | 1.48e-13 | 69.3 |
MS.gene36713.t1 | AT1G67710 | 64.815 | 54 | 18 | 1 | 152 | 204 | 195 | 248 | 1.85e-13 | 69.3 |
MS.gene36713.t1 | AT1G67710 | 64.815 | 54 | 18 | 1 | 152 | 204 | 130 | 183 | 1.86e-13 | 68.9 |
MS.gene36713.t1 | AT3G13040 | 43.023 | 86 | 47 | 2 | 137 | 221 | 228 | 312 | 7.06e-13 | 67.4 |
MS.gene36713.t1 | AT3G13040 | 43.023 | 86 | 47 | 2 | 137 | 221 | 228 | 312 | 7.06e-13 | 67.4 |
MS.gene36713.t1 | AT3G13040 | 43.023 | 86 | 47 | 2 | 137 | 221 | 228 | 312 | 7.06e-13 | 67.4 |
MS.gene36713.t1 | AT3G25790 | 56.604 | 53 | 22 | 1 | 155 | 206 | 201 | 253 | 8.37e-13 | 67.0 |
MS.gene36713.t1 | AT4G00660 | 28.571 | 119 | 83 | 1 | 6 | 122 | 371 | 489 | 1.52e-12 | 66.6 |
MS.gene36713.t1 | AT4G00660 | 28.571 | 119 | 83 | 1 | 6 | 122 | 371 | 489 | 1.52e-12 | 66.6 |
MS.gene36713.t1 | AT3G61240 | 28.571 | 119 | 83 | 1 | 6 | 122 | 364 | 482 | 1.75e-12 | 66.2 |
MS.gene36713.t1 | AT3G61240 | 28.571 | 119 | 83 | 1 | 6 | 122 | 364 | 482 | 1.75e-12 | 66.2 |
MS.gene36713.t1 | AT3G22310 | 30.952 | 126 | 84 | 2 | 3 | 126 | 361 | 485 | 2.65e-12 | 65.9 |
MS.gene36713.t1 | AT3G22310 | 30.952 | 126 | 84 | 2 | 3 | 126 | 361 | 485 | 2.67e-12 | 65.9 |
MS.gene36713.t1 | AT2G45810 | 28.571 | 119 | 83 | 1 | 6 | 122 | 394 | 512 | 4.04e-12 | 65.1 |
MS.gene36713.t1 | AT4G28610 | 50.000 | 64 | 31 | 1 | 150 | 212 | 225 | 288 | 4.86e-12 | 64.7 |
MS.gene36713.t1 | AT5G49240 | 54.902 | 51 | 23 | 0 | 149 | 199 | 222 | 272 | 6.67e-12 | 63.9 |
MS.gene36713.t1 | AT2G27070 | 36.264 | 91 | 58 | 0 | 119 | 209 | 194 | 284 | 1.47e-11 | 63.5 |
MS.gene36713.t1 | AT3G04030 | 49.123 | 57 | 28 | 1 | 150 | 205 | 45 | 101 | 1.68e-11 | 63.2 |
MS.gene36713.t1 | AT5G29000 | 41.892 | 74 | 40 | 2 | 130 | 202 | 213 | 284 | 1.85e-11 | 62.8 |
MS.gene36713.t1 | AT3G04030 | 49.123 | 57 | 28 | 1 | 150 | 205 | 45 | 101 | 1.96e-11 | 63.2 |
MS.gene36713.t1 | AT5G18240 | 50.877 | 57 | 27 | 1 | 150 | 205 | 45 | 101 | 2.66e-11 | 62.8 |
MS.gene36713.t1 | AT5G18240 | 50.877 | 57 | 27 | 1 | 150 | 205 | 45 | 101 | 2.66e-11 | 62.8 |
MS.gene36713.t1 | AT5G18240 | 50.877 | 57 | 27 | 1 | 150 | 205 | 45 | 101 | 2.94e-11 | 62.4 |
MS.gene36713.t1 | AT5G18240 | 50.877 | 57 | 27 | 1 | 150 | 205 | 45 | 101 | 3.06e-11 | 62.4 |
MS.gene36713.t1 | AT5G18240 | 50.877 | 57 | 27 | 1 | 150 | 205 | 45 | 101 | 3.06e-11 | 62.4 |
MS.gene36713.t1 | AT2G01060 | 54.386 | 57 | 25 | 1 | 150 | 205 | 15 | 71 | 3.61e-11 | 61.6 |
MS.gene36713.t1 | AT5G29000 | 41.892 | 74 | 40 | 2 | 130 | 202 | 213 | 284 | 3.73e-11 | 62.4 |
MS.gene36713.t1 | AT2G20400 | 53.125 | 64 | 29 | 1 | 150 | 212 | 231 | 294 | 3.92e-11 | 62.0 |
MS.gene36713.t1 | AT1G13300 | 46.154 | 65 | 32 | 2 | 149 | 212 | 180 | 242 | 3.98e-11 | 62.0 |
MS.gene36713.t1 | AT2G20400 | 53.125 | 64 | 29 | 1 | 150 | 212 | 231 | 294 | 4.00e-11 | 62.0 |
MS.gene36713.t1 | AT5G29000 | 41.892 | 74 | 40 | 2 | 130 | 202 | 170 | 241 | 4.16e-11 | 62.0 |
MS.gene36713.t1 | AT5G29000 | 41.892 | 74 | 40 | 2 | 130 | 202 | 170 | 241 | 4.16e-11 | 62.0 |
MS.gene36713.t1 | AT3G04030 | 46.429 | 56 | 30 | 0 | 150 | 205 | 45 | 100 | 4.74e-11 | 62.0 |
MS.gene36713.t1 | AT1G49560 | 50.847 | 59 | 28 | 1 | 149 | 206 | 191 | 249 | 7.06e-11 | 61.2 |
Find 50 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCTATTCCTTCTCGAATAT+TGG | 0.160903 | 8.2:-78249427 | MS.gene36713:CDS |
TTCTTAAGAATCTTGGTTTC+AGG | 0.181986 | 8.2:-78251992 | MS.gene36713:CDS |
TGACTCATATAACTAATAAT+AGG | 0.255686 | 8.2:+78251963 | None:intergenic |
TCCTTGAATGCGTTCAAGTC+TGG | 0.307276 | 8.2:-78251830 | MS.gene36713:CDS |
GCTTTGATTCTTAAGAATCT+TGG | 0.333972 | 8.2:-78251999 | MS.gene36713:CDS |
ATGTGGTACAACGCTTCTTT+TGG | 0.360475 | 8.2:-78252021 | MS.gene36713:CDS |
TCGAAATGTCTCCTTTCATC+TGG | 0.373423 | 8.2:+78251570 | None:intergenic |
TAATGTGGCAAGCCATCTTC+AGG | 0.386166 | 8.2:-78249373 | MS.gene36713:intron |
TTGTAGTGACTTTGTTAGTA+AGG | 0.398889 | 8.2:-78251789 | MS.gene36713:CDS |
CCCAGACTTGAACGCATTCA+AGG | 0.403087 | 8.2:+78251829 | None:intergenic |
GACTCATATAACTAATAATA+GGG | 0.421629 | 8.2:+78251964 | None:intergenic |
ATCTGGGCTCACAAAGGAAA+TGG | 0.429905 | 8.2:+78251587 | None:intergenic |
TCTTAAGAATCTTGGTTTCA+GGG | 0.434508 | 8.2:-78251991 | MS.gene36713:CDS |
TATTATTAGTTATATGAGTC+AGG | 0.445349 | 8.2:-78251961 | MS.gene36713:intron |
AGATATTCCAGCGGTAGATA+TGG | 0.449221 | 8.2:-78251762 | MS.gene36713:CDS |
CGAAGCAGGATGATCGGAAA+TGG | 0.452472 | 8.2:-78249179 | MS.gene36713:CDS |
TACTTTGGTCTTAGGTAGAC+TGG | 0.457759 | 8.2:-78249506 | MS.gene36713:intron |
AATGTGAGATAAAAGCTAAT+CGG | 0.462021 | 8.2:-78249685 | MS.gene36713:CDS |
CCTTGAATGCGTTCAAGTCT+GGG | 0.463606 | 8.2:-78251829 | MS.gene36713:CDS |
TGATTAACTACAACATTCCT+TGG | 0.469598 | 8.2:-78251739 | MS.gene36713:CDS |
GATATGATAGAGAAACATAT+AGG | 0.471728 | 8.2:-78251549 | MS.gene36713:intron |
GAGACATATCTTACCGAAGC+AGG | 0.475105 | 8.2:-78249193 | MS.gene36713:CDS |
CATTTCCGATCATCCTGCTT+CGG | 0.484186 | 8.2:+78249180 | None:intergenic |
CCTTTGTGAGCCCAGATGAA+AGG | 0.506008 | 8.2:-78251581 | MS.gene36713:CDS |
TACACTCTCACTAAAATGAC+TGG | 0.518270 | 8.2:-78252071 | None:intergenic |
AATATTGGATCTAATGAAAG+TGG | 0.519493 | 8.2:-78249412 | MS.gene36713:CDS |
TGTAGTGACTTTGTTAGTAA+GGG | 0.522265 | 8.2:-78251788 | MS.gene36713:CDS |
ACAACATCTGCAAATAAAGT+AGG | 0.528162 | 8.2:-78249722 | MS.gene36713:CDS |
ATTAGATCCAATATTCGAGA+AGG | 0.541398 | 8.2:+78249420 | None:intergenic |
AATGACTGGAAGTACATCAA+TGG | 0.550477 | 8.2:-78252057 | MS.gene36713:CDS |
ATTACATCTACCGCGTGGGA+TGG | 0.552861 | 8.2:-78251632 | MS.gene36713:CDS |
CGAAATGTCTCCTTTCATCT+GGG | 0.554319 | 8.2:+78251571 | None:intergenic |
GTGAAGGCGGTGGAGCAACT+AGG | 0.556418 | 8.2:-78249459 | MS.gene36713:CDS |
GGTAGATTATAACCTGAAGA+TGG | 0.564115 | 8.2:+78249361 | None:intergenic |
TCTTACCGAAGCAGGATGAT+CGG | 0.574745 | 8.2:-78249185 | MS.gene36713:CDS |
TTAATCACCATATCTACCGC+TGG | 0.579180 | 8.2:+78251755 | None:intergenic |
ATCGGAAATGGCTAAATACA+AGG | 0.595293 | 8.2:-78249167 | MS.gene36713:CDS |
CATATAACTAATAATAGGGA+TGG | 0.602559 | 8.2:+78251968 | None:intergenic |
ATTGGATCTAATGAAAGTGG+AGG | 0.613074 | 8.2:-78249409 | MS.gene36713:CDS |
CATCTTACGTTTGGATACCA+AGG | 0.615406 | 8.2:+78251722 | None:intergenic |
GGGCTTGACAAGGCATAATG+TGG | 0.631155 | 8.2:-78249388 | MS.gene36713:CDS |
TTGGATCTAATGAAAGTGGA+GGG | 0.637148 | 8.2:-78249408 | MS.gene36713:CDS |
CCTTTCATCTGGGCTCACAA+AGG | 0.638109 | 8.2:+78251581 | None:intergenic |
CTTGAATGCGTTCAAGTCTG+GGG | 0.643789 | 8.2:-78251828 | MS.gene36713:CDS |
TGAAAGTGGAGGGCTTGACA+AGG | 0.644049 | 8.2:-78249398 | MS.gene36713:CDS |
CAGGATTACATCTACCGCGT+GGG | 0.645040 | 8.2:-78251636 | MS.gene36713:CDS |
ACAGGATTACATCTACCGCG+TGG | 0.703821 | 8.2:-78251637 | MS.gene36713:intron |
ATGGTATACACTCAGCAATG+TGG | 0.716399 | 8.2:-78252038 | MS.gene36713:CDS |
TAAGGGACTAGATATTCCAG+CGG | 0.751272 | 8.2:-78251771 | MS.gene36713:CDS |
GAGCAACATTCCATCCCACG+CGG | 0.794839 | 8.2:+78251622 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAATTAATGTAGTTTAAA+AGG | + | chr8.2:78251084-78251103 | None:intergenic | 10.0% |
!! | TATGTATAAATGAATTATTA+AGG | + | chr8.2:78250717-78250736 | None:intergenic | 10.0% |
!!! | AATAAAAAAGTTTTACATAA+AGG | - | chr8.2:78250865-78250884 | MS.gene36713:intron | 10.0% |
!!! | ATAAAAAAGTTTTACATAAA+GGG | - | chr8.2:78250866-78250885 | MS.gene36713:intron | 10.0% |
!!! | TATAAAATACTAATTTCTTT+TGG | + | chr8.2:78250149-78250168 | None:intergenic | 10.0% |
!!! | TTAACATAATAACTTTTTAT+AGG | - | chr8.2:78249353-78249372 | MS.gene36713:intron | 10.0% |
!! | AAGTTATTATGTTAAGAATT+AGG | + | chr8.2:78249348-78249367 | None:intergenic | 15.0% |
!! | AATAAAATTCTAATTGTCAA+TGG | + | chr8.2:78250257-78250276 | None:intergenic | 15.0% |
!! | AGAAATTACAATTATAATAC+AGG | + | chr8.2:78249301-78249320 | None:intergenic | 15.0% |
!! | ATAAAATTCTAATTGTCAAT+GGG | + | chr8.2:78250256-78250275 | None:intergenic | 15.0% |
!! | GTAAGAAATAAATACTATTA+TGG | + | chr8.2:78250744-78250763 | None:intergenic | 15.0% |
!! | TATAAATGAATTATTAAGGA+CGG | + | chr8.2:78250713-78250732 | None:intergenic | 15.0% |
!!! | AATATGACAGTTTTTTTTTT+AGG | - | chr8.2:78250224-78250243 | MS.gene36713:intron | 15.0% |
!!! | ATATGACAGTTTTTTTTTTA+GGG | - | chr8.2:78250225-78250244 | MS.gene36713:intron | 15.0% |
!!! | ATTAATTACAGTTTTGAATA+AGG | + | chr8.2:78251915-78251934 | None:intergenic | 15.0% |
!!! | TGATATTCATATATTTTCAT+AGG | - | chr8.2:78251942-78251961 | MS.gene36713:intron | 15.0% |
!!! | TTTTTCAAGATCTTTTATTT+AGG | - | chr8.2:78250899-78250918 | MS.gene36713:intron | 15.0% |
!! | AAAACTGTATTAAGAAAATC+AGG | + | chr8.2:78251692-78251711 | None:intergenic | 20.0% |
!! | GACTCATATAACTAATAATA+GGG | + | chr8.2:78249259-78249278 | None:intergenic | 20.0% |
!! | GTTGAATTATTATAGTGTTA+TGG | - | chr8.2:78250579-78250598 | MS.gene36713:intron | 20.0% |
!! | TATTATTAGTTATATGAGTC+AGG | - | chr8.2:78249259-78249278 | MS.gene36713:intron | 20.0% |
!! | TCCTTTCTATATCTAATTAT+CGG | + | chr8.2:78250024-78250043 | None:intergenic | 20.0% |
!! | TGACTCATATAACTAATAAT+AGG | + | chr8.2:78249260-78249279 | None:intergenic | 20.0% |
!! | TTGTTTATCAATGTTGTATA+AGG | - | chr8.2:78251632-78251651 | MS.gene36713:CDS | 20.0% |
!!! | AAATAGAGAAGTTAAGTTTT+TGG | - | chr8.2:78249939-78249958 | MS.gene36713:intron | 20.0% |
!!! | AACTACTCTAATGTTTATTT+TGG | - | chr8.2:78251353-78251372 | MS.gene36713:intron | 20.0% |
!!! | ACTACTCTAATGTTTATTTT+GGG | - | chr8.2:78251354-78251373 | MS.gene36713:intron | 20.0% |
!!! | ATCTTTTATTTAGGAATTGA+TGG | - | chr8.2:78250908-78250927 | MS.gene36713:intron | 20.0% |
!!! | ATTATATCTAGTGTCAATTT+TGG | + | chr8.2:78250804-78250823 | None:intergenic | 20.0% |
!!! | TAAGGTATTGAAATAGTTTT+TGG | + | chr8.2:78251897-78251916 | None:intergenic | 20.0% |
!!! | TGATTTTCTTAATACAGTTT+TGG | - | chr8.2:78251691-78251710 | MS.gene36713:intron | 20.0% |
! | AAAAAAGTAGTAACTGTTAG+AGG | + | chr8.2:78251390-78251409 | None:intergenic | 25.0% |
! | AACATTATGAGAAGAATGAA+TGG | + | chr8.2:78251586-78251605 | None:intergenic | 25.0% |
! | AATATTGGATCTAATGAAAG+TGG | - | chr8.2:78251808-78251827 | MS.gene36713:CDS | 25.0% |
! | AATGTGAGATAAAAGCTAAT+CGG | - | chr8.2:78251535-78251554 | MS.gene36713:intron | 25.0% |
! | AATTCACCTATGAATATGAA+GGG | - | chr8.2:78250301-78250320 | MS.gene36713:intron | 25.0% |
! | CATATAACTAATAATAGGGA+TGG | + | chr8.2:78249255-78249274 | None:intergenic | 25.0% |
! | GATATGATAGAGAAACATAT+AGG | - | chr8.2:78249671-78249690 | MS.gene36713:intron | 25.0% |
! | TCATTAAAATGGCAAAGTAA+AGG | + | chr8.2:78249706-78249725 | None:intergenic | 25.0% |
! | TCCGATAATTAGATATAGAA+AGG | - | chr8.2:78250020-78250039 | MS.gene36713:intron | 25.0% |
! | TCTATTTAAAAGAAGTAGAC+AGG | + | chr8.2:78249926-78249945 | None:intergenic | 25.0% |
! | TCTTATGCATTCTATATTTC+TGG | + | chr8.2:78252009-78252028 | None:intergenic | 25.0% |
! | TTATACCAATGAAGACAAAT+TGG | + | chr8.2:78249992-78250011 | None:intergenic | 25.0% |
! | TTGGAAACACCATTATATTA+TGG | + | chr8.2:78251051-78251070 | None:intergenic | 25.0% |
!! | AAAGCGTCATAGTAAATAAT+TGG | - | chr8.2:78249729-78249748 | MS.gene36713:CDS | 25.0% |
!! | TGACTTATTAAATTTTCAGC+AGG | + | chr8.2:78250386-78250405 | None:intergenic | 25.0% |
!! | TTTAAAAGGTAGTCTTCTTT+TGG | + | chr8.2:78251070-78251089 | None:intergenic | 25.0% |
!! | TTTTTATAGGCAAAGAAACT+TGG | - | chr8.2:78249366-78249385 | MS.gene36713:intron | 25.0% |
!!! | ACTACTTTTTTTTCTTCTTC+TGG | - | chr8.2:78251399-78251418 | MS.gene36713:intron | 25.0% |
!!! | AGTTAAGTTTTTGGATTTTG+TGG | - | chr8.2:78249948-78249967 | MS.gene36713:intron | 25.0% |
!!! | GTGTTACTTTTTTGTTCAAT+TGG | - | chr8.2:78250557-78250576 | MS.gene36713:intron | 25.0% |
!!! | TTAATACAGTTTTGGTACTT+TGG | - | chr8.2:78251699-78251718 | MS.gene36713:intron | 25.0% |
AAAAGCAAAACTTCCTCAAA+TGG | + | chr8.2:78249814-78249833 | None:intergenic | 30.0% | |
ACAACATCTGCAAATAAAGT+AGG | - | chr8.2:78251498-78251517 | MS.gene36713:intron | 30.0% | |
AGAACCTGAGAGATATTATT+AGG | - | chr8.2:78250832-78250851 | MS.gene36713:intron | 30.0% | |
AGTATAGTTGTATCAACACT+TGG | - | chr8.2:78251245-78251264 | MS.gene36713:intron | 30.0% | |
ATGCACAGATATATAGACAT+TGG | - | chr8.2:78250438-78250457 | MS.gene36713:intron | 30.0% | |
ATGGATATTGAAAATGTGTG+AGG | + | chr8.2:78250494-78250513 | None:intergenic | 30.0% | |
ATTAGATCCAATATTCGAGA+AGG | + | chr8.2:78251803-78251822 | None:intergenic | 30.0% | |
ATTGAGCATAGTTATGCTTT+AGG | - | chr8.2:78249886-78249905 | MS.gene36713:intron | 30.0% | |
CAATGAACAGTGTGAAATAA+CGG | + | chr8.2:78251615-78251634 | None:intergenic | 30.0% | |
CAATTCACCTATGAATATGA+AGG | - | chr8.2:78250300-78250319 | MS.gene36713:intron | 30.0% | |
GAACCTGAGAGATATTATTA+GGG | - | chr8.2:78250833-78250852 | MS.gene36713:intron | 30.0% | |
GAATATGGAGTTTGTATCTT+AGG | - | chr8.2:78250676-78250695 | MS.gene36713:intron | 30.0% | |
GAATTAGGCATATTTCTTGT+TGG | + | chr8.2:78249333-78249352 | None:intergenic | 30.0% | |
GATAGAGAAACATATAGGTT+AGG | - | chr8.2:78249676-78249695 | MS.gene36713:CDS | 30.0% | |
GCAAGGCATATAATTGAAAA+AGG | + | chr8.2:78250952-78250971 | None:intergenic | 30.0% | |
GCTTTGATTCTTAAGAATCT+TGG | - | chr8.2:78249221-78249240 | MS.gene36713:intron | 30.0% | |
GTTCTCTCACCATAATATAA+TGG | - | chr8.2:78251039-78251058 | MS.gene36713:intron | 30.0% | |
TATATAGCACATCTTACGTT+TGG | + | chr8.2:78249510-78249529 | None:intergenic | 30.0% | |
TATCCCTAATAATATCTCTC+AGG | + | chr8.2:78250839-78250858 | None:intergenic | 30.0% | |
TCATATTCATAGGTGAATTG+TGG | + | chr8.2:78250300-78250319 | None:intergenic | 30.0% | |
TCTTAAGAATCTTGGTTTCA+GGG | - | chr8.2:78249229-78249248 | MS.gene36713:intron | 30.0% | |
TGATTAACTACAACATTCCT+TGG | - | chr8.2:78249481-78249500 | MS.gene36713:CDS | 30.0% | |
TGTAGTGACTTTGTTAGTAA+GGG | - | chr8.2:78249432-78249451 | MS.gene36713:CDS | 30.0% | |
TTCTTAAGAATCTTGGTTTC+AGG | - | chr8.2:78249228-78249247 | MS.gene36713:intron | 30.0% | |
TTGTAGTGACTTTGTTAGTA+AGG | - | chr8.2:78249431-78249450 | MS.gene36713:CDS | 30.0% | |
TTTGGGAAAAAAAGAACAAG+AGG | - | chr8.2:78251005-78251024 | MS.gene36713:intron | 30.0% | |
! | ATATCTAGTGTCAATTTTGG+TGG | + | chr8.2:78250801-78250820 | None:intergenic | 30.0% |
! | ATTTGAGGAAGTTTTGCTTT+TGG | - | chr8.2:78249813-78249832 | MS.gene36713:intron | 30.0% |
! | GACGCTTTTGTTCATTAAAA+TGG | + | chr8.2:78249717-78249736 | None:intergenic | 30.0% |
!! | AAATAGTTTTTGGAAACCGT+GGG | + | chr8.2:78251887-78251906 | None:intergenic | 30.0% |
!! | TATCTAGTGTCAATTTTGGT+GGG | + | chr8.2:78250800-78250819 | None:intergenic | 30.0% |
AATGTATGATAAGACTGCAC+GGG | - | chr8.2:78250043-78250062 | MS.gene36713:intron | 35.0% | |
ACAAGCATATCAAAGAGACA+AGG | + | chr8.2:78250534-78250553 | None:intergenic | 35.0% | |
AGAATTGCATTACCGTTGAA+GGG | + | chr8.2:78251297-78251316 | None:intergenic | 35.0% | |
ATCATGCACATATATGAGCA+AGG | - | chr8.2:78250649-78250668 | MS.gene36713:intron | 35.0% | |
ATCGGAAATGGCTAAATACA+AGG | - | chr8.2:78252053-78252072 | MS.gene36713:CDS | 35.0% | |
ATTGAAAATGTGTGAGGTGT+GGG | + | chr8.2:78250488-78250507 | None:intergenic | 35.0% | |
ATTGGATCTAATGAAAGTGG+AGG | - | chr8.2:78251811-78251830 | MS.gene36713:CDS | 35.0% | |
CTACAACCCTTCATATTCAT+AGG | + | chr8.2:78250310-78250329 | None:intergenic | 35.0% | |
GAATGTATGATAAGACTGCA+CGG | - | chr8.2:78250042-78250061 | MS.gene36713:intron | 35.0% | |
GCACAAAAAATTTGTGAAGG+CGG | - | chr8.2:78251748-78251767 | MS.gene36713:CDS | 35.0% | |
GCTGCACAAAAAATTTGTGA+AGG | - | chr8.2:78251745-78251764 | MS.gene36713:CDS | 35.0% | |
GGTAGATTATAACCTGAAGA+TGG | + | chr8.2:78251862-78251881 | None:intergenic | 35.0% | |
TATTGAAAATGTGTGAGGTG+TGG | + | chr8.2:78250489-78250508 | None:intergenic | 35.0% | |
TCATGCACATATATGAGCAA+GGG | - | chr8.2:78250650-78250669 | MS.gene36713:intron | 35.0% | |
TGGAAATCATTATAGCAGCA+TGG | - | chr8.2:78250599-78250618 | MS.gene36713:intron | 35.0% | |
TTGGATCTAATGAAAGTGGA+GGG | - | chr8.2:78251812-78251831 | MS.gene36713:CDS | 35.0% | |
TTTAATAAGTCACAGCCTCT+CGG | - | chr8.2:78250394-78250413 | MS.gene36713:intron | 35.0% | |
! | AAAAAGTACAAGCTTGGAGT+TGG | - | chr8.2:78251201-78251220 | MS.gene36713:intron | 35.0% |
! | AAAAGTACAAGCTTGGAGTT+GGG | - | chr8.2:78251202-78251221 | MS.gene36713:intron | 35.0% |
! | ATACTAAAACGCATCGACAA+AGG | + | chr8.2:78249544-78249563 | None:intergenic | 35.0% |
! | TCTTTGAGCAAATGATAGTG+TGG | + | chr8.2:78250338-78250357 | None:intergenic | 35.0% |
! | TTTGTGGCAAGTTGAAATTG+TGG | - | chr8.2:78249964-78249983 | MS.gene36713:intron | 35.0% |
! | TTTTTCTAGATTTTGCCGAG+AGG | + | chr8.2:78250412-78250431 | None:intergenic | 35.0% |
!! | AGGAAGTTTTGCTTTTGGAA+GGG | - | chr8.2:78249818-78249837 | MS.gene36713:intron | 35.0% |
!! | AGTTTTGGTACTTTGGTCTT+AGG | - | chr8.2:78251706-78251725 | MS.gene36713:intron | 35.0% |
!! | CATGTAGAGGTGATTTGTTT+GGG | - | chr8.2:78250988-78251007 | MS.gene36713:intron | 35.0% |
!! | GAAATAGTTTTTGGAAACCG+TGG | + | chr8.2:78251888-78251907 | None:intergenic | 35.0% |
!! | TTTTGGAAATGCACTTGAGA+GGG | + | chr8.2:78250132-78250151 | None:intergenic | 35.0% |
!!! | ACAAATTTTTTGTGCAGCTC+TGG | + | chr8.2:78251743-78251762 | None:intergenic | 35.0% |
!!! | CTTGTACTTTTTTGCTGCTA+CGG | + | chr8.2:78251193-78251212 | None:intergenic | 35.0% |
!!! | TCAATTTTGGTGGGTTAGTT+CGG | + | chr8.2:78250791-78250810 | None:intergenic | 35.0% |
AAAACTTCCTCAAATGGTGC+AGG | + | chr8.2:78249808-78249827 | None:intergenic | 40.0% | |
AACTTTGTGGATGCATGTAG+AGG | - | chr8.2:78250975-78250994 | MS.gene36713:intron | 40.0% | |
AGATATTCCAGCGGTAGATA+TGG | - | chr8.2:78249458-78249477 | MS.gene36713:CDS | 40.0% | |
ATGCACTTGAGAGGGATATT+AGG | + | chr8.2:78250124-78250143 | None:intergenic | 40.0% | |
ATGGTATACACTCAGCAATG+TGG | - | chr8.2:78249182-78249201 | MS.gene36713:CDS | 40.0% | |
ATGTAATCCTGTTGATCACG+CGG | + | chr8.2:78249575-78249594 | None:intergenic | 40.0% | |
ATTGTATCCTGCACCATTTG+AGG | - | chr8.2:78249798-78249817 | MS.gene36713:intron | 40.0% | |
CAAAAAATTTGTGAAGGCGG+TGG | - | chr8.2:78251751-78251770 | MS.gene36713:CDS | 40.0% | |
CATAGGTGAATTGTGGTGTT+GGG | + | chr8.2:78250293-78250312 | None:intergenic | 40.0% | |
CATCTTACGTTTGGATACCA+AGG | + | chr8.2:78249501-78249520 | None:intergenic | 40.0% | |
CGAAATGTCTCCTTTCATCT+GGG | + | chr8.2:78249652-78249671 | None:intergenic | 40.0% | |
CGCTATTCCTTCTCGAATAT+TGG | - | chr8.2:78251793-78251812 | MS.gene36713:CDS | 40.0% | |
GAATTGCATTACCGTTGAAG+GGG | + | chr8.2:78251296-78251315 | None:intergenic | 40.0% | |
GAGAATTGCATTACCGTTGA+AGG | + | chr8.2:78251298-78251317 | None:intergenic | 40.0% | |
GGATCTGTGTGTATCATTGA+TGG | + | chr8.2:78250513-78250532 | None:intergenic | 40.0% | |
GGCTGAAAGATTATCACAAG+AGG | - | chr8.2:78249852-78249871 | MS.gene36713:intron | 40.0% | |
GGTTATAATCTACCTTCCCA+CGG | - | chr8.2:78251868-78251887 | MS.gene36713:intron | 40.0% | |
TAAGGGACTAGATATTCCAG+CGG | - | chr8.2:78249449-78249468 | MS.gene36713:CDS | 40.0% | |
TATGCCTTGCTCAAACTTTG+TGG | - | chr8.2:78250962-78250981 | MS.gene36713:intron | 40.0% | |
TCAAATGGTGCAGGATACAA+TGG | + | chr8.2:78249799-78249818 | None:intergenic | 40.0% | |
TCATAGGTGAATTGTGGTGT+TGG | + | chr8.2:78250294-78250313 | None:intergenic | 40.0% | |
TCGAAATGTCTCCTTTCATC+TGG | + | chr8.2:78249653-78249672 | None:intergenic | 40.0% | |
TTAATCACCATATCTACCGC+TGG | + | chr8.2:78249468-78249487 | None:intergenic | 40.0% | |
! | ATGTGGTACAACGCTTCTTT+TGG | - | chr8.2:78249199-78249218 | MS.gene36713:CDS | 40.0% |
! | GCAGCAAAAAAGTACAAGCT+TGG | - | chr8.2:78251195-78251214 | MS.gene36713:intron | 40.0% |
! | TGGTGCCAATTTGTCTTCAT+TGG | - | chr8.2:78249984-78250003 | MS.gene36713:intron | 40.0% |
!! | CTTTTGGAAATGCACTTGAG+AGG | + | chr8.2:78250133-78250152 | None:intergenic | 40.0% |
!! | GAGGAAGTTTTGCTTTTGGA+AGG | - | chr8.2:78249817-78249836 | MS.gene36713:intron | 40.0% |
!! | GCATGTAGAGGTGATTTGTT+TGG | - | chr8.2:78250987-78251006 | MS.gene36713:intron | 40.0% |
!! | TACTTTGGTCTTAGGTAGAC+TGG | - | chr8.2:78251714-78251733 | MS.gene36713:intron | 40.0% |
AACTACCTACTAGCTAGCTG+CGG | - | chr8.2:78251270-78251289 | MS.gene36713:intron | 45.0% | |
ATCTGGGCTCACAAAGGAAA+TGG | + | chr8.2:78249636-78249655 | None:intergenic | 45.0% | |
CATTTCCGATCATCCTGCTT+CGG | + | chr8.2:78252043-78252062 | None:intergenic | 45.0% | |
CCTTGAATGCGTTCAAGTCT+GGG | - | chr8.2:78249391-78249410 | MS.gene36713:CDS | 45.0% | |
CTTGAATGCGTTCAAGTCTG+GGG | - | chr8.2:78249392-78249411 | MS.gene36713:CDS | 45.0% | |
GAGACATATCTTACCGAAGC+AGG | - | chr8.2:78252027-78252046 | MS.gene36713:CDS | 45.0% | |
GAGTCAGGTAACTGTACTAC+AGG | - | chr8.2:78249274-78249293 | MS.gene36713:intron | 45.0% | |
GCATCCACAAAGTTTGAGCA+AGG | + | chr8.2:78250969-78250988 | None:intergenic | 45.0% | |
TAATGTGGCAAGCCATCTTC+AGG | - | chr8.2:78251847-78251866 | MS.gene36713:CDS | 45.0% | |
TCCTTGAATGCGTTCAAGTC+TGG | - | chr8.2:78249390-78249409 | MS.gene36713:CDS | 45.0% | |
TCTTACCGAAGCAGGATGAT+CGG | - | chr8.2:78252035-78252054 | MS.gene36713:CDS | 45.0% | |
! | TATGAGCAAGGGCGTGAATA+TGG | - | chr8.2:78250661-78250680 | MS.gene36713:intron | 45.0% |
! | TTTGGAAGGGTGTGCTATTG+AGG | - | chr8.2:78249831-78249850 | MS.gene36713:intron | 45.0% |
!! | AGTTTTTGGAAACCGTGGGA+AGG | + | chr8.2:78251883-78251902 | None:intergenic | 45.0% |
!! | AGAAATAATTAATAAATTAA+AGG | - | chr8.2:78251121-78251140 | MS.gene36713:intron | 5.0% |
!!! | ATTTATTTATTTATTTTTTC+AGG | - | chr8.2:78249763-78249782 | MS.gene36713:intron | 5.0% |
ACAGGATTACATCTACCGCG+TGG | - | chr8.2:78249583-78249602 | MS.gene36713:intron | 50.0% | |
ATTACATCTACCGCGTGGGA+TGG | - | chr8.2:78249588-78249607 | MS.gene36713:intron | 50.0% | |
CAGGATTACATCTACCGCGT+GGG | - | chr8.2:78249584-78249603 | MS.gene36713:intron | 50.0% | |
CCCAGACTTGAACGCATTCA+AGG | + | chr8.2:78249394-78249413 | None:intergenic | 50.0% | |
CCTTTCATCTGGGCTCACAA+AGG | + | chr8.2:78249642-78249661 | None:intergenic | 50.0% | |
CCTTTGTGAGCCCAGATGAA+AGG | - | chr8.2:78249639-78249658 | MS.gene36713:intron | 50.0% | |
CGAAGCAGGATGATCGGAAA+TGG | - | chr8.2:78252041-78252060 | MS.gene36713:CDS | 50.0% | |
GGGCTTGACAAGGCATAATG+TGG | - | chr8.2:78251832-78251851 | MS.gene36713:CDS | 50.0% | |
TGAAAGTGGAGGGCTTGACA+AGG | - | chr8.2:78251822-78251841 | MS.gene36713:CDS | 50.0% | |
TGTGAGGTGTGGGAAGAAGA+GGG | + | chr8.2:78250478-78250497 | None:intergenic | 50.0% | |
CTCATGACCGCGTGATCAAC+AGG | - | chr8.2:78249565-78249584 | MS.gene36713:intron | 55.0% | |
GAGCAACATTCCATCCCACG+CGG | + | chr8.2:78249601-78249620 | None:intergenic | 55.0% | |
GGAGTTGGGACAACTGTCGT+TGG | - | chr8.2:78251216-78251235 | MS.gene36713:intron | 55.0% | |
GTGTGAGGTGTGGGAAGAAG+AGG | + | chr8.2:78250479-78250498 | None:intergenic | 55.0% | |
GGGACAACTGTCGTTGGCAG+AGG | - | chr8.2:78251222-78251241 | MS.gene36713:intron | 60.0% | |
GTGAAGGCGGTGGAGCAACT+AGG | - | chr8.2:78251761-78251780 | MS.gene36713:CDS | 60.0% | |
AGGGGCCGCAGCTAGCTAGT+AGG | + | chr8.2:78251278-78251297 | None:intergenic | 65.0% | |
GCTAGCTGCGGCCCCTTCAA+CGG | - | chr8.2:78251282-78251301 | MS.gene36713:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 78249164 | 78252078 | 78249164 | ID=MS.gene36713 |
chr8.2 | mRNA | 78249164 | 78252078 | 78249164 | ID=MS.gene36713.t1;Parent=MS.gene36713 |
chr8.2 | exon | 78251962 | 78252078 | 78251962 | ID=MS.gene36713.t1.exon1;Parent=MS.gene36713.t1 |
chr8.2 | CDS | 78251962 | 78252078 | 78251962 | ID=cds.MS.gene36713.t1;Parent=MS.gene36713.t1 |
chr8.2 | exon | 78251730 | 78251867 | 78251730 | ID=MS.gene36713.t1.exon2;Parent=MS.gene36713.t1 |
chr8.2 | CDS | 78251730 | 78251867 | 78251730 | ID=cds.MS.gene36713.t1;Parent=MS.gene36713.t1 |
chr8.2 | exon | 78251550 | 78251655 | 78251550 | ID=MS.gene36713.t1.exon3;Parent=MS.gene36713.t1 |
chr8.2 | CDS | 78251550 | 78251655 | 78251550 | ID=cds.MS.gene36713.t1;Parent=MS.gene36713.t1 |
chr8.2 | exon | 78249673 | 78249767 | 78249673 | ID=MS.gene36713.t1.exon4;Parent=MS.gene36713.t1 |
chr8.2 | CDS | 78249673 | 78249767 | 78249673 | ID=cds.MS.gene36713.t1;Parent=MS.gene36713.t1 |
chr8.2 | exon | 78249374 | 78249514 | 78249374 | ID=MS.gene36713.t1.exon5;Parent=MS.gene36713.t1 |
chr8.2 | CDS | 78249374 | 78249514 | 78249374 | ID=cds.MS.gene36713.t1;Parent=MS.gene36713.t1 |
chr8.2 | exon | 78249164 | 78249232 | 78249164 | ID=MS.gene36713.t1.exon6;Parent=MS.gene36713.t1 |
chr8.2 | CDS | 78249164 | 78249232 | 78249164 | ID=cds.MS.gene36713.t1;Parent=MS.gene36713.t1 |
Gene Sequence |
Protein sequence |