Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36839.t1 | XP_024640464.1 | 53.5 | 888 | 377 | 7 | 65 | 943 | 66 | 926 | 2.00E-270 | 942.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36839.t1 | A0A396GU28 | 55.1 | 868 | 359 | 7 | 65 | 929 | 66 | 905 | 4.7e-261 | 910.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05690 | MS.gene36839 | 0.807913 | 4.01E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36839.t1 | MTR_8g070580 | 37.910 | 488 | 195 | 16 | 86 | 569 | 28 | 411 | 4.37e-81 | 273 |
| MS.gene36839.t1 | MTR_4g028910 | 38.028 | 284 | 108 | 5 | 230 | 512 | 190 | 406 | 5.18e-47 | 175 |
| MS.gene36839.t1 | MTR_2g048835 | 32.031 | 256 | 150 | 4 | 657 | 910 | 191 | 424 | 8.68e-38 | 149 |
| MS.gene36839.t1 | MTR_7g090610 | 30.194 | 361 | 192 | 9 | 701 | 1025 | 1 | 337 | 3.78e-35 | 138 |
| MS.gene36839.t1 | MTR_8g464800 | 35.359 | 181 | 116 | 1 | 645 | 824 | 1 | 181 | 6.57e-31 | 126 |
| MS.gene36839.t1 | MTR_5g081480 | 30.970 | 268 | 155 | 6 | 788 | 1026 | 651 | 917 | 2.75e-30 | 129 |
| MS.gene36839.t1 | MTR_5g081480 | 37.255 | 153 | 83 | 3 | 402 | 542 | 475 | 626 | 1.34e-22 | 105 |
| MS.gene36839.t1 | MTR_0152s0060 | 50.000 | 114 | 41 | 2 | 628 | 740 | 17 | 115 | 5.33e-28 | 118 |
| MS.gene36839.t1 | MTR_0152s0010 | 60.526 | 76 | 30 | 0 | 661 | 736 | 1 | 76 | 5.65e-28 | 109 |
| MS.gene36839.t1 | MTR_6g462630 | 36.508 | 126 | 80 | 0 | 786 | 911 | 27 | 152 | 3.54e-23 | 99.4 |
| MS.gene36839.t1 | MTR_3g049490 | 37.500 | 200 | 87 | 9 | 850 | 1030 | 5 | 185 | 6.29e-23 | 97.8 |
| MS.gene36839.t1 | MTR_1g053290 | 38.060 | 134 | 56 | 3 | 446 | 565 | 80 | 200 | 3.70e-22 | 95.9 |
| MS.gene36839.t1 | MTR_1g046450 | 63.333 | 60 | 22 | 0 | 463 | 522 | 1 | 60 | 2.47e-18 | 83.6 |
| MS.gene36839.t1 | MTR_2g018850 | 27.461 | 193 | 133 | 3 | 386 | 572 | 260 | 451 | 4.69e-18 | 89.7 |
| MS.gene36839.t1 | MTR_5g068970 | 55.357 | 56 | 25 | 0 | 606 | 661 | 46 | 101 | 2.47e-16 | 75.9 |
| MS.gene36839.t1 | MTR_2g020400 | 35.404 | 161 | 89 | 6 | 805 | 958 | 1 | 153 | 3.18e-15 | 75.5 |
| MS.gene36839.t1 | MTR_6g022470 | 32.911 | 158 | 95 | 3 | 809 | 955 | 29 | 186 | 4.09e-14 | 74.3 |
| MS.gene36839.t1 | MTR_2g461790 | 37.079 | 89 | 56 | 0 | 823 | 911 | 10 | 98 | 4.92e-14 | 72.4 |
| MS.gene36839.t1 | MTR_1g041225 | 56.604 | 53 | 23 | 0 | 538 | 590 | 1 | 53 | 6.91e-14 | 69.7 |
| MS.gene36839.t1 | MTR_0177s0050 | 23.940 | 401 | 235 | 14 | 115 | 497 | 39 | 387 | 2.12e-13 | 73.9 |
| MS.gene36839.t1 | MTR_8g040660 | 30.120 | 166 | 72 | 3 | 744 | 908 | 13 | 135 | 1.24e-12 | 69.7 |
| MS.gene36839.t1 | MTR_3g436320 | 48.571 | 70 | 35 | 1 | 842 | 911 | 56 | 124 | 8.89e-12 | 65.1 |
| MS.gene36839.t1 | MTR_0140s0100 | 45.333 | 75 | 31 | 2 | 575 | 649 | 3 | 67 | 2.60e-11 | 64.7 |
| MS.gene36839.t1 | MTR_6g059380 | 43.478 | 69 | 38 | 1 | 64 | 131 | 454 | 522 | 2.93e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36839.t1 | AT1G06740 | 27.304 | 575 | 400 | 9 | 344 | 910 | 158 | 722 | 1.48e-62 | 227 |
| MS.gene36839.t1 | AT3G05850 | 26.066 | 633 | 433 | 12 | 298 | 911 | 155 | 771 | 1.41e-61 | 225 |
| MS.gene36839.t1 | AT5G15685 | 31.757 | 296 | 195 | 4 | 321 | 613 | 158 | 449 | 7.05e-41 | 158 |
| MS.gene36839.t1 | AT1G64260 | 22.966 | 553 | 380 | 13 | 343 | 869 | 186 | 718 | 1.16e-30 | 130 |
| MS.gene36839.t1 | AT1G64260 | 22.966 | 553 | 380 | 13 | 343 | 869 | 186 | 718 | 1.16e-30 | 130 |
| MS.gene36839.t1 | AT1G64255 | 23.611 | 576 | 390 | 16 | 309 | 858 | 164 | 715 | 9.68e-27 | 118 |
| MS.gene36839.t1 | AT1G49920 | 22.868 | 551 | 385 | 13 | 341 | 858 | 179 | 722 | 2.09e-25 | 114 |
| MS.gene36839.t1 | AT1G49920 | 22.868 | 551 | 385 | 13 | 341 | 858 | 179 | 722 | 2.09e-25 | 114 |
| MS.gene36839.t1 | AT1G64253 | 23.276 | 348 | 243 | 10 | 550 | 881 | 2 | 341 | 3.83e-18 | 88.6 |
| MS.gene36839.t1 | AT1G64253 | 23.333 | 270 | 190 | 8 | 623 | 881 | 2 | 265 | 5.22e-11 | 65.9 |
Find 241 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTATCAGTGTTACAAATT+TGG | 0.148232 | 8.4:+43941346 | None:intergenic |
| TCAACAGTTGGCCATAATTT+TGG | 0.149177 | 8.4:+43938928 | None:intergenic |
| TGTCTTTCTTCTGGCCTTCT+TGG | 0.167014 | 8.4:+43938858 | None:intergenic |
| TGCATCTGCTTTCCCCTTGC+AGG | 0.170034 | 8.4:+43938744 | None:intergenic |
| TAAATATGCTGATGTGTATT+TGG | 0.195833 | 8.4:-43941207 | MS.gene36839:CDS |
| AAGCATTGAAAGAAGCTTTA+TGG | 0.205084 | 8.4:-43939652 | MS.gene36839:CDS |
| CTCATCATTTGTCTTTCTTC+TGG | 0.226796 | 8.4:+43938849 | None:intergenic |
| TCCAATCTCTTCTGAATTAT+AGG | 0.240879 | 8.4:+43939326 | None:intergenic |
| CAGCATATTTAATGCCCTTA+TGG | 0.251733 | 8.4:+43941219 | None:intergenic |
| AAGAATACTGATCAATTTCT+TGG | 0.260370 | 8.4:+43940380 | None:intergenic |
| CCCTCAACGATTGAGATAAT+TGG | 0.264500 | 8.4:+43939422 | None:intergenic |
| TTAATAACTCTCATGTAAAA+TGG | 0.264961 | 8.4:+43940501 | None:intergenic |
| TCCATTGCCTTATCAAATTC+AGG | 0.268452 | 8.4:+43939605 | None:intergenic |
| TACCAAAACTTAGTTGATTC+AGG | 0.282416 | 8.4:+43941320 | None:intergenic |
| ACATGATTCACTGTCTCTTC+TGG | 0.283171 | 8.4:+43940873 | None:intergenic |
| CCGCTACCTGCATATTTAAA+TGG | 0.283243 | 8.4:-43941428 | MS.gene36839:CDS |
| GGGACTAGTTGATACTTTAA+AGG | 0.289372 | 8.4:-43939750 | MS.gene36839:CDS |
| TTCATGCAATATGTTGTATT+TGG | 0.291785 | 8.4:-43939145 | MS.gene36839:CDS |
| TACTCACAAGACTTACTTTC+AGG | 0.295016 | 8.4:-43940475 | MS.gene36839:CDS |
| CATCAGGAAGTTTGAACTTT+GGG | 0.303540 | 8.4:+43940679 | None:intergenic |
| ACATGTGTAGCTTGTGTAAT+TGG | 0.307835 | 8.4:+43938546 | None:intergenic |
| ATGGTTTACTAACCTTCTTC+TGG | 0.311453 | 8.4:-43939923 | MS.gene36839:CDS |
| TTTGATGCTAAGTAGATATC+AGG | 0.314540 | 8.4:-43940298 | MS.gene36839:CDS |
| GCCAAATTTGTAACACTGAT+AGG | 0.315560 | 8.4:-43941347 | MS.gene36839:CDS |
| GTCTTTCTTCTGGCCTTCTT+GGG | 0.316219 | 8.4:+43938859 | None:intergenic |
| TTCAACCTTCTGCAGTTTGT+AGG | 0.316750 | 8.4:+43938826 | None:intergenic |
| GCAGAAGTAGCTTGTCTAAC+AGG | 0.316964 | 8.4:+43938510 | None:intergenic |
| TTGATTAAAACTGTGCTTCC+TGG | 0.317097 | 8.4:+43940174 | None:intergenic |
| TGAGATTAACACATTAGATT+TGG | 0.317571 | 8.4:-43941369 | MS.gene36839:CDS |
| CTAACAATGGACCAAAATTA+TGG | 0.319843 | 8.4:-43938939 | MS.gene36839:CDS |
| GGTGATGAGTTTAGTGAATC+TGG | 0.323611 | 8.4:-43941041 | MS.gene36839:CDS |
| AGATGCAGCCTGTTGATTTC+CGG | 0.324976 | 8.4:+43938401 | None:intergenic |
| TGATTTGTTCCTTGAGTCTC+AGG | 0.331319 | 8.4:+43938576 | None:intergenic |
| AGACCTTTGATTGGTCTTGA+TGG | 0.339632 | 8.4:-43940066 | MS.gene36839:CDS |
| TGCAAAAGGTGTAATGAATT+AGG | 0.344746 | 8.4:-43938781 | MS.gene36839:CDS |
| ATCCTGAATCAACTAAGTTT+TGG | 0.344926 | 8.4:-43941322 | MS.gene36839:CDS |
| TGTTTCTTGAAAGGAAGATA+TGG | 0.346667 | 8.4:-43940042 | MS.gene36839:CDS |
| CCATTCAGCCTCCATATGTT+AGG | 0.355284 | 8.4:-43938897 | MS.gene36839:CDS |
| TTCACCTTGTTTCCACCCTT+TGG | 0.356828 | 8.4:+43938709 | None:intergenic |
| TCATACTCAGTGTGATTTGC+AGG | 0.357751 | 8.4:-43939498 | MS.gene36839:CDS |
| TTATGTGTGAAGCACTTATA+TGG | 0.359014 | 8.4:-43939701 | MS.gene36839:CDS |
| AAGAATATGGCTTGAAATCT+AGG | 0.361746 | 8.4:-43940587 | MS.gene36839:CDS |
| AGAACTGCTGTGAAAGAATA+TGG | 0.366566 | 8.4:-43940600 | MS.gene36839:CDS |
| CTGATGGTTGGACTCCTAAT+TGG | 0.368641 | 8.4:-43939286 | MS.gene36839:CDS |
| CCACATACCAGGTGGGTGTT+TGG | 0.369420 | 8.4:+43939541 | None:intergenic |
| ATTATGTTGCTCATTGGTAT+AGG | 0.373792 | 8.4:-43939100 | MS.gene36839:intron |
| ACAAAATTCAATATAGGAAA+TGG | 0.386361 | 8.4:-43939891 | MS.gene36839:CDS |
| TATTTGAACCTGATGGTACT+TGG | 0.389653 | 8.4:-43941400 | MS.gene36839:CDS |
| ACCAGGTGTCTCATTTCTAA+TGG | 0.391298 | 8.4:+43941154 | None:intergenic |
| AGCTGGTGGGCTTAGACAGT+TGG | 0.394720 | 8.4:-43941276 | MS.gene36839:CDS |
| CCATCTTCACTTACTTCATC+TGG | 0.396027 | 8.4:+43940717 | None:intergenic |
| ATACATAAATGTCACAAAAC+TGG | 0.396704 | 8.4:-43940435 | MS.gene36839:CDS |
| TACATGACTAACAGAATTGT+TGG | 0.399514 | 8.4:-43939389 | MS.gene36839:CDS |
| GAAACAACAACAAACTTTGA+TGG | 0.404015 | 8.4:-43941805 | MS.gene36839:CDS |
| GTAGGTTCTGACCTTGGATC+TGG | 0.405987 | 8.4:-43940951 | MS.gene36839:CDS |
| ACAAAGTCTTCAATAGTAGT+TGG | 0.415687 | 8.4:+43940774 | None:intergenic |
| TGTAGAAGGTGGCAGTTAAC+TGG | 0.415719 | 8.4:-43939179 | MS.gene36839:CDS |
| CATCAGTACATATCAGCATA+AGG | 0.416054 | 8.4:+43941129 | None:intergenic |
| CTGGCCTTCTTGGGTCTCCC+TGG | 0.416335 | 8.4:+43938868 | None:intergenic |
| GGAGATGATTGAGGGAAGTA+TGG | 0.418087 | 8.4:-43940250 | MS.gene36839:CDS |
| CCTGGTGTCCTCCTAACATA+TGG | 0.420987 | 8.4:+43938886 | None:intergenic |
| ATCAGTACATATCAGCATAA+GGG | 0.421535 | 8.4:+43941130 | None:intergenic |
| GGTAAAATAGTTGTTGTTGA+TGG | 0.422722 | 8.4:-43940843 | MS.gene36839:CDS |
| TTCATATCTCCTGACCAATT+AGG | 0.423301 | 8.4:+43939272 | None:intergenic |
| AGCAGGAACCGGAAATCAAC+AGG | 0.427785 | 8.4:-43938409 | MS.gene36839:CDS |
| GTTTCTTGAAAGGAAGATAT+GGG | 0.428679 | 8.4:-43940041 | MS.gene36839:CDS |
| TCCACTGTTGTTCTTCGCCA+TGG | 0.430001 | 8.4:+43941885 | None:intergenic |
| GTTGATTTCCGGTTCCTGCT+TGG | 0.430504 | 8.4:+43938412 | None:intergenic |
| CCATCAGGAAGTTTGAACTT+TGG | 0.430909 | 8.4:+43940678 | None:intergenic |
| TTAACTGCTGTGGGTAAAGA+TGG | 0.433642 | 8.4:-43940009 | MS.gene36839:CDS |
| ATCACTCCTCTTCTTCGCCA+TGG | 0.434755 | 8.4:+43941762 | None:intergenic |
| GGTGATGACTTTAGTGAATC+TGG | 0.436949 | 8.4:-43940999 | MS.gene36839:CDS |
| ACCCACCTGGTATGTGGAGC+AGG | 0.446550 | 8.4:-43939535 | MS.gene36839:CDS |
| CAAAGTCTTCAATAGTAGTT+GGG | 0.447001 | 8.4:+43940775 | None:intergenic |
| CTCCCAGGAAAAGGCCTAGC+TGG | 0.448662 | 8.4:-43941293 | MS.gene36839:CDS |
| CTGAGGATTATGTTGCTCAT+TGG | 0.450271 | 8.4:-43939106 | MS.gene36839:CDS |
| TCAGTATGTGGTCAACTTGA+TGG | 0.454550 | 8.4:-43939216 | MS.gene36839:CDS |
| CTCATTTCTAATGGTGGGTG+TGG | 0.455352 | 8.4:+43941163 | None:intergenic |
| CTCAACAATTGCAAAAGCTA+TGG | 0.455532 | 8.4:+43939969 | None:intergenic |
| CTAACATATGGAGGCTGAAT+GGG | 0.455603 | 8.4:+43938898 | None:intergenic |
| GTCACAGGCTACACAACAAA+AGG | 0.455734 | 8.4:-43938376 | MS.gene36839:CDS |
| TGAGTTTGTGAGGGTCCATA+AGG | 0.458953 | 8.4:-43941234 | MS.gene36839:CDS |
| AGGCACTGCAGACCTTTGAT+TGG | 0.460468 | 8.4:-43940075 | MS.gene36839:CDS |
| TCCTATAATTCAGAAGAGAT+TGG | 0.463602 | 8.4:-43939327 | MS.gene36839:CDS |
| AAAAGCTTTGGAGATGATTG+AGG | 0.464078 | 8.4:-43940259 | MS.gene36839:CDS |
| ACATACATCCTAGAAAATAC+TGG | 0.464910 | 8.4:+43940129 | None:intergenic |
| GCTGGTGGGCTTAGACAGTT+GGG | 0.466208 | 8.4:-43941275 | MS.gene36839:CDS |
| AAGGGTAGTGAGGGTGATGA+GGG | 0.468593 | 8.4:-43941065 | MS.gene36839:CDS |
| ATTTCACCATTTAAATATGC+AGG | 0.469715 | 8.4:+43941422 | None:intergenic |
| CACAGTGCCTGAATTTGATA+AGG | 0.471926 | 8.4:-43939612 | MS.gene36839:CDS |
| TGTTAAGATCCTCCAGAAGA+AGG | 0.472282 | 8.4:+43939911 | None:intergenic |
| TGGATCTGGATCTGAATTTG+AGG | 0.478126 | 8.4:-43940937 | MS.gene36839:CDS |
| GCTAGGAGCCAAGCAGGAAC+CGG | 0.479519 | 8.4:-43938420 | MS.gene36839:CDS |
| AGTCAAGCTAGGAGCCAAGC+AGG | 0.479632 | 8.4:-43938426 | MS.gene36839:CDS |
| TGGTATGTACTCCCAGGAAA+AGG | 0.480753 | 8.4:-43941302 | MS.gene36839:CDS |
| ATCTTAACAAAATTCAATAT+AGG | 0.481623 | 8.4:-43939897 | MS.gene36839:CDS |
| TTCTAATGGTGGGTGTGGAT+TGG | 0.483819 | 8.4:+43941168 | None:intergenic |
| AAAGCTTTAATGCGCATAGT+AGG | 0.491354 | 8.4:+43940348 | None:intergenic |
| GGTGTGGATTGGTTATGATC+AGG | 0.494027 | 8.4:+43941179 | None:intergenic |
| CCTAACATATGGAGGCTGAA+TGG | 0.494292 | 8.4:+43938897 | None:intergenic |
| TGCCTCATAGATGCAGTGCT+TGG | 0.496022 | 8.4:+43938456 | None:intergenic |
| GGTTGGACTCCTAATTGGTC+AGG | 0.499248 | 8.4:-43939281 | MS.gene36839:CDS |
| GCTTCTTTCAATGCTTCACC+AGG | 0.500571 | 8.4:+43939659 | None:intergenic |
| AGAAGGTTGAAGAAGGTAGA+TGG | 0.501648 | 8.4:-43938814 | MS.gene36839:CDS |
| AGGTGTCTCATTTCTAATGG+TGG | 0.502199 | 8.4:+43941157 | None:intergenic |
| AAAAGACTTGTGCATGTAGA+AGG | 0.502752 | 8.4:-43939193 | MS.gene36839:CDS |
| GAAGACTTTGTTGATGAAGA+TGG | 0.502991 | 8.4:-43940762 | MS.gene36839:CDS |
| AAGAGTAAATTAGGTGTGGA+TGG | 0.503397 | 8.4:-43940153 | MS.gene36839:CDS |
| CAAGGGTAGTGAGGGTGATG+AGG | 0.505220 | 8.4:-43941066 | MS.gene36839:CDS |
| AAAATAGTTGTTGTTGATGG+TGG | 0.506804 | 8.4:-43940840 | MS.gene36839:CDS |
| AGTGAATCTGGTGATGATGC+TGG | 0.507663 | 8.4:-43940987 | MS.gene36839:CDS |
| AAAGCTTTGGAGATGATTGA+GGG | 0.508063 | 8.4:-43940258 | MS.gene36839:CDS |
| CTTGATGGTTGTTTCTTGAA+AGG | 0.509170 | 8.4:-43940051 | MS.gene36839:CDS |
| CCAATTATCTCAATCGTTGA+GGG | 0.511764 | 8.4:-43939422 | MS.gene36839:CDS |
| CCAAACACCCACCTGGTATG+TGG | 0.511770 | 8.4:-43939541 | MS.gene36839:CDS |
| GTTGATGTAGGTTCTGACCT+TGG | 0.513700 | 8.4:-43940957 | MS.gene36839:CDS |
| ATCTTTATCATATTGACAGA+TGG | 0.517663 | 8.4:+43941485 | None:intergenic |
| GCTGCTTCTGTTACACATGT+TGG | 0.518076 | 8.4:-43938480 | MS.gene36839:CDS |
| GTCACAGGCTCATCACCATC+AGG | 0.521668 | 8.4:+43940663 | None:intergenic |
| CAGTGGAAAGGCGAAGAAGA+AGG | 0.522575 | 8.4:-43941869 | MS.gene36839:CDS |
| CCATATGTTAGGAGGACACC+AGG | 0.524205 | 8.4:-43938886 | MS.gene36839:CDS |
| ACAGGCTGCATCTGTGTCAC+AGG | 0.524280 | 8.4:-43938391 | MS.gene36839:CDS |
| ACCAATTATCTCAATCGTTG+AGG | 0.524584 | 8.4:-43939423 | MS.gene36839:CDS |
| AATTGTTGAGGCTGAAACAA+AGG | 0.524657 | 8.4:-43939956 | MS.gene36839:CDS |
| TTGATGCAAATGTTGAGCAC+AGG | 0.524807 | 8.4:-43939724 | MS.gene36839:CDS |
| TGTTGATGGTGGATCTATAG+AGG | 0.527186 | 8.4:-43940829 | MS.gene36839:CDS |
| CCAGATGAAGTAAGTGAAGA+TGG | 0.527631 | 8.4:-43940717 | MS.gene36839:CDS |
| AATTTCTTGGCTATGAGAGT+AGG | 0.527838 | 8.4:+43940393 | None:intergenic |
| ATTTGAACCTGATGGTACTT+GGG | 0.528104 | 8.4:-43941399 | MS.gene36839:CDS |
| TGAGATAAACAAGGGTAGTG+AGG | 0.531208 | 8.4:-43941075 | MS.gene36839:CDS |
| GGTTATGATGATTATGATGT+AGG | 0.533114 | 8.4:-43941020 | MS.gene36839:CDS |
| CAGAGGTGAATGTTCCTTTG+TGG | 0.535119 | 8.4:+43941453 | None:intergenic |
| CCATTTAAATATGCAGGTAG+CGG | 0.537331 | 8.4:+43941428 | None:intergenic |
| CCAGGAAAAGGCCTAGCTGG+TGG | 0.537547 | 8.4:-43941290 | MS.gene36839:CDS |
| CATATCAGCATAAGGGGACC+AGG | 0.541749 | 8.4:+43941137 | None:intergenic |
| GGTGTCTCATTTCTAATGGT+GGG | 0.542730 | 8.4:+43941158 | None:intergenic |
| ACAACAAAAGGGTGCCAGAA+GGG | 0.543216 | 8.4:-43938364 | MS.gene36839:CDS |
| GAGTTGTTAAGAAGTAATCC+AGG | 0.547455 | 8.4:-43940192 | MS.gene36839:CDS |
| AGAGGATCAATGAGGAAGCA+TGG | 0.547937 | 8.4:-43939574 | MS.gene36839:CDS |
| GACAAGCATTGAACGTGGAA+AGG | 0.548042 | 8.4:-43941839 | MS.gene36839:CDS |
| TCCATGTCCCAAGTACCATC+AGG | 0.550050 | 8.4:+43941392 | None:intergenic |
| CAACATATTGCATGAACACA+TGG | 0.550799 | 8.4:+43939152 | None:intergenic |
| GAGGATCAATGAGGAAGCAT+GGG | 0.551125 | 8.4:-43939573 | MS.gene36839:CDS |
| ATGGAACTGTCAGATGCAAA+AGG | 0.551512 | 8.4:-43938795 | MS.gene36839:CDS |
| ACGTGGAAAGGCGCAGAAGA+AGG | 0.553010 | 8.4:-43941827 | MS.gene36839:CDS |
| CAATGAGCAACATAATCCTC+AGG | 0.557065 | 8.4:+43939107 | None:intergenic |
| GGGTCAATTATTAACTGCTG+TGG | 0.557134 | 8.4:-43940019 | MS.gene36839:CDS |
| ATGGTGGATCTATAGAGGAT+GGG | 0.557355 | 8.4:-43940824 | MS.gene36839:CDS |
| TCAACAATTGCAAAAGCTAT+GGG | 0.557514 | 8.4:+43939970 | None:intergenic |
| AATCAAGAGTAAATTAGGTG+TGG | 0.557684 | 8.4:-43940157 | MS.gene36839:CDS |
| CACAACAGAAGAACCTGCAA+GGG | 0.559009 | 8.4:-43938757 | MS.gene36839:CDS |
| TATGGACCCTCACAAACTCA+TGG | 0.560022 | 8.4:+43941237 | None:intergenic |
| CCCTGCTCCACATACCAGGT+GGG | 0.560057 | 8.4:+43939534 | None:intergenic |
| GAGTTTGTGAGGGTCCATAA+GGG | 0.561258 | 8.4:-43941233 | MS.gene36839:CDS |
| GCCTGAATTTGATAAGGCAA+TGG | 0.561737 | 8.4:-43939606 | MS.gene36839:CDS |
| TGTGCCCTGCTCCACATACC+AGG | 0.562798 | 8.4:+43939530 | None:intergenic |
| CATTTAAATATGCAGGTAGC+GGG | 0.564326 | 8.4:+43941429 | None:intergenic |
| AACAGAGTGCAAAACTAGGT+GGG | 0.564680 | 8.4:-43940322 | MS.gene36839:CDS |
| GACACCAGGGAGACCCAAGA+AGG | 0.566950 | 8.4:-43938872 | MS.gene36839:CDS |
| GGTAGTGAGGGTGATGAGGG+TGG | 0.567862 | 8.4:-43941062 | MS.gene36839:CDS |
| AACATCATATTGCCTAACAA+TGG | 0.567934 | 8.4:-43938952 | MS.gene36839:CDS |
| CAACAAAAGGGTGCCAGAAG+GGG | 0.567973 | 8.4:-43938363 | MS.gene36839:CDS |
| AAAAGGGTGCCAGAAGGGGA+AGG | 0.572458 | 8.4:-43938359 | MS.gene36839:CDS |
| ATGGATTAAGTACCTTCTGT+TGG | 0.573433 | 8.4:+43939854 | None:intergenic |
| GAGATAAACAAGGGTAGTGA+GGG | 0.576951 | 8.4:-43941074 | MS.gene36839:CDS |
| GTTTACTAACCTTCTTCTGG+AGG | 0.578399 | 8.4:-43939920 | MS.gene36839:CDS |
| AATACCAAAGGGTGGAAACA+AGG | 0.579159 | 8.4:-43938713 | MS.gene36839:intron |
| AGGCTGAAACAAAGGACTCA+TGG | 0.581429 | 8.4:-43939948 | MS.gene36839:CDS |
| ATGGGTAATGCATCAACAGT+TGG | 0.582486 | 8.4:+43938916 | None:intergenic |
| TTCAGCCTCCATATGTTAGG+AGG | 0.584657 | 8.4:-43938894 | MS.gene36839:CDS |
| GGTCAATTATTAACTGCTGT+GGG | 0.584876 | 8.4:-43940018 | MS.gene36839:CDS |
| ACTGTCTAAGCCCACCAGCT+AGG | 0.585736 | 8.4:+43941279 | None:intergenic |
| CAGGAAAAGGCCTAGCTGGT+GGG | 0.586124 | 8.4:-43941289 | MS.gene36839:CDS |
| TGACCTAACTGAAAAGTCAC+AGG | 0.587296 | 8.4:+43940648 | None:intergenic |
| TGGTGGATCTATAGAGGATG+GGG | 0.587826 | 8.4:-43940823 | MS.gene36839:CDS |
| ATGGCGAAGAAGAGGAGTGA+TGG | 0.588911 | 8.4:-43941760 | MS.gene36839:CDS |
| GATGGTGGATCTATAGAGGA+TGG | 0.590305 | 8.4:-43940825 | MS.gene36839:CDS |
| ACCTGATGGTACTTGGGACA+TGG | 0.594047 | 8.4:-43941393 | MS.gene36839:CDS |
| TCAGTACATATCAGCATAAG+GGG | 0.596114 | 8.4:+43941131 | None:intergenic |
| TCACAGGCTACACAACAAAA+GGG | 0.596434 | 8.4:-43938375 | MS.gene36839:CDS |
| AGAGTAAATTAGGTGTGGAT+GGG | 0.596537 | 8.4:-43940152 | MS.gene36839:CDS |
| TCACAAGACTTACTTTCAGG+TGG | 0.596821 | 8.4:-43940472 | MS.gene36839:CDS |
| ATGAAACCATGGCGAAGAAG+AGG | 0.596880 | 8.4:-43941768 | MS.gene36839:CDS |
| AAACTGCAGAAGGTTGAAGA+AGG | 0.597534 | 8.4:-43938821 | MS.gene36839:CDS |
| CAATTATCTCAATCGTTGAG+GGG | 0.597655 | 8.4:-43939421 | MS.gene36839:CDS |
| CTTATGCTGATATGTACTGA+TGG | 0.597804 | 8.4:-43941128 | MS.gene36839:CDS |
| GACCAAGCACTGCATCTATG+AGG | 0.597893 | 8.4:-43938458 | MS.gene36839:CDS |
| TTTCTTGAAAGGAAGATATG+GGG | 0.598449 | 8.4:-43940040 | MS.gene36839:CDS |
| GGTGTCCTCCTAACATATGG+AGG | 0.599806 | 8.4:+43938889 | None:intergenic |
| ATATGCAGGTAGCGGGTCAG+AGG | 0.600750 | 8.4:+43941436 | None:intergenic |
| CCAAAGTTCAAACTTCCTGA+TGG | 0.601728 | 8.4:-43940678 | MS.gene36839:CDS |
| AGGTGAATGTTCCTTTGTGG+TGG | 0.603009 | 8.4:+43941456 | None:intergenic |
| GATCAATGAGGAAGCATGGG+AGG | 0.605364 | 8.4:-43939570 | MS.gene36839:CDS |
| AAACAAAGGACTCATGGTCA+TGG | 0.608008 | 8.4:-43939942 | MS.gene36839:CDS |
| AAGATGTCCATGAGTTTGTG+AGG | 0.610333 | 8.4:-43941244 | MS.gene36839:CDS |
| CACAACAAAAGGGTGCCAGA+AGG | 0.611040 | 8.4:-43938365 | MS.gene36839:CDS |
| TACAAACAGAGTGCAAAACT+AGG | 0.611112 | 8.4:-43940326 | MS.gene36839:CDS |
| GGCGAAGAACAACAGTGGAA+AGG | 0.614693 | 8.4:-43941881 | MS.gene36839:CDS |
| GATATGTACTGATGGTAATG+AGG | 0.617627 | 8.4:-43941120 | MS.gene36839:CDS |
| GAAATGTCCAAACACCCACC+TGG | 0.618968 | 8.4:-43939548 | MS.gene36839:CDS |
| ATGAGCCTACAAACTGCAGA+AGG | 0.620012 | 8.4:-43938831 | MS.gene36839:CDS |
| TGAGGAAAACATTGATACTG+AGG | 0.621156 | 8.4:-43941102 | MS.gene36839:CDS |
| TTCTTGAAAGGAAGATATGG+GGG | 0.621250 | 8.4:-43940039 | MS.gene36839:CDS |
| CGCGCAGGAGAATGAAACCA+TGG | 0.621871 | 8.4:-43941779 | MS.gene36839:CDS |
| ACAGAGTGCAAAACTAGGTG+GGG | 0.628638 | 8.4:-43940321 | MS.gene36839:CDS |
| GGAAACGCGCAGAAATGTCA+AGG | 0.633790 | 8.4:-43941739 | MS.gene36839:CDS |
| CAAATTCAGATCCAGATCCA+AGG | 0.634156 | 8.4:+43940940 | None:intergenic |
| AGGTCTGCAGTGCCTCGCAA+AGG | 0.634953 | 8.4:+43940083 | None:intergenic |
| AGGCAATGGAAAGTATGAAG+AGG | 0.636631 | 8.4:-43939592 | MS.gene36839:CDS |
| GGCAAGCTAAGAGTCAAGCT+AGG | 0.636941 | 8.4:-43938437 | MS.gene36839:CDS |
| CATGTAAGATAGCCTTTGCG+AGG | 0.637192 | 8.4:-43940095 | MS.gene36839:CDS |
| AAACTTTGATGGAAACGCGC+AGG | 0.637373 | 8.4:-43941794 | MS.gene36839:CDS |
| GGTGAAATATTTGAACCTGA+TGG | 0.637454 | 8.4:-43941407 | MS.gene36839:CDS |
| GATGATTGAGGGAAGTATGG+TGG | 0.638017 | 8.4:-43940247 | MS.gene36839:CDS |
| GTGACACATCCTGAGACTCA+AGG | 0.638075 | 8.4:-43938585 | MS.gene36839:CDS |
| AGAGACAGTGAATCATGTCA+AGG | 0.638804 | 8.4:-43940868 | MS.gene36839:CDS |
| AAACAGAGTGCAAAACTAGG+TGG | 0.640250 | 8.4:-43940323 | MS.gene36839:CDS |
| GCAGGTAAATAACATGTGTG+AGG | 0.641370 | 8.4:-43939480 | MS.gene36839:CDS |
| GCATCTAAGAAGTTATGCAG+AGG | 0.642616 | 8.4:-43940214 | MS.gene36839:CDS |
| ATTCATATCTGACCAACAGA+AGG | 0.643405 | 8.4:-43939866 | MS.gene36839:intron |
| GAGGAAAACATTGATACTGA+GGG | 0.644849 | 8.4:-43941101 | MS.gene36839:CDS |
| CCCACCTGGTATGTGGAGCA+GGG | 0.645996 | 8.4:-43939534 | MS.gene36839:CDS |
| ACACAACAGAAGAACCTGCA+AGG | 0.646923 | 8.4:-43938758 | MS.gene36839:CDS |
| GCTGGTGAAGAAGTTGATGT+AGG | 0.648199 | 8.4:-43940969 | MS.gene36839:CDS |
| AAGATTAGATTCCACCACAA+AGG | 0.650138 | 8.4:-43941467 | MS.gene36839:CDS |
| GACAGTGAATCATGTCAAGG+AGG | 0.652501 | 8.4:-43940865 | MS.gene36839:CDS |
| ACAGTGAATCATGTCAAGGA+GGG | 0.653647 | 8.4:-43940864 | MS.gene36839:CDS |
| TGAGGGTGATGAGATAAACA+AGG | 0.654264 | 8.4:-43941084 | MS.gene36839:CDS |
| AGATGTCCATGAGTTTGTGA+GGG | 0.654393 | 8.4:-43941243 | MS.gene36839:CDS |
| ACCATTAGAAATGAGACACC+TGG | 0.654467 | 8.4:-43941155 | MS.gene36839:CDS |
| AGACTTGTGCATGTAGAAGG+TGG | 0.655480 | 8.4:-43939190 | MS.gene36839:CDS |
| CAACCATCAAGACCAATCAA+AGG | 0.657567 | 8.4:+43940063 | None:intergenic |
| ACAACAGAAGAACCTGCAAG+GGG | 0.666113 | 8.4:-43938756 | MS.gene36839:CDS |
| AAAGCTCAAAGTGAGACACT+AGG | 0.666743 | 8.4:-43938330 | MS.gene36839:CDS |
| AAATGGTGTTGATCAGTATG+TGG | 0.669170 | 8.4:-43939228 | MS.gene36839:CDS |
| AAGTATGAAGAGGATCAATG+AGG | 0.671073 | 8.4:-43939582 | MS.gene36839:CDS |
| GAGGGTGATGAGATAAACAA+GGG | 0.672669 | 8.4:-43941083 | MS.gene36839:CDS |
| GCCCTGCTCCACATACCAGG+TGG | 0.673800 | 8.4:+43939533 | None:intergenic |
| TCCATGGCGAAGAACAACAG+TGG | 0.683905 | 8.4:-43941886 | MS.gene36839:CDS |
| ACAATGACAAGCATTGAACG+TGG | 0.706633 | 8.4:-43941844 | MS.gene36839:CDS |
| CATATGTTAGGAGGACACCA+GGG | 0.719628 | 8.4:-43938885 | MS.gene36839:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTAAATAATCAAGTA+TGG | + | chr8.4:43940356-43940375 | None:intergenic | 10.0% |
| !!! | TTTTGATAAAAAAAAAAGTA+GGG | - | chr8.4:43938545-43938564 | MS.gene36839:CDS | 10.0% |
| !!! | TTTTTGATAAAAAAAAAAGT+AGG | - | chr8.4:43938544-43938563 | MS.gene36839:CDS | 10.0% |
| !! | ATCTTAACAAAATTCAATAT+AGG | - | chr8.4:43940291-43940310 | MS.gene36839:CDS | 15.0% |
| !! | ACAAAATTCAATATAGGAAA+TGG | - | chr8.4:43940297-43940316 | MS.gene36839:CDS | 20.0% |
| !! | GTATTTAAACAAAAATGAGA+AGG | - | chr8.4:43939632-43939651 | MS.gene36839:CDS | 20.0% |
| !! | TTAATAACTCTCATGTAAAA+TGG | + | chr8.4:43939690-43939709 | None:intergenic | 20.0% |
| !! | TTTATATATCACTTTGTTAC+AGG | - | chr8.4:43941186-43941205 | MS.gene36839:CDS | 20.0% |
| !!! | ATAGTGATTTTGATGAAAAT+TGG | - | chr8.4:43939274-43939293 | MS.gene36839:CDS | 20.0% |
| !!! | GCATTTATAACTGAATTTTA+TGG | - | chr8.4:43941511-43941530 | MS.gene36839:intron | 20.0% |
| !!! | GTTTTAATCAAGAGTAAATT+AGG | - | chr8.4:43940026-43940045 | MS.gene36839:CDS | 20.0% |
| !!! | GTTTTTTTTATTGTTTTCGT+TGG | - | chr8.4:43938567-43938586 | MS.gene36839:CDS | 20.0% |
| !!! | TAGTGATTTTGATGAAAATT+GGG | - | chr8.4:43939275-43939294 | MS.gene36839:CDS | 20.0% |
| !!! | TTTTTTATTTCTTAACACCA+GGG | - | chr8.4:43940418-43940437 | MS.gene36839:CDS | 20.0% |
| ! | AAGAATACTGATCAATTTCT+TGG | + | chr8.4:43939811-43939830 | None:intergenic | 25.0% |
| ! | ATACATAAATGTCACAAAAC+TGG | - | chr8.4:43939753-43939772 | MS.gene36839:intron | 25.0% |
| ! | ATCTTTATCATATTGACAGA+TGG | + | chr8.4:43938706-43938725 | None:intergenic | 25.0% |
| ! | ATTTCACCATTTAAATATGC+AGG | + | chr8.4:43938769-43938788 | None:intergenic | 25.0% |
| ! | TAAATATGCTGATGTGTATT+TGG | - | chr8.4:43938981-43939000 | MS.gene36839:CDS | 25.0% |
| ! | TATAACCAAACACATTATTC+AGG | + | chr8.4:43941122-43941141 | None:intergenic | 25.0% |
| ! | TATGCTTTACTGTAAAAGTA+TGG | - | chr8.4:43938492-43938511 | MS.gene36839:CDS | 25.0% |
| ! | TGAGATTAACACATTAGATT+TGG | - | chr8.4:43938819-43938838 | MS.gene36839:CDS | 25.0% |
| ! | TTCATGCAATATGTTGTATT+TGG | - | chr8.4:43941043-43941062 | MS.gene36839:CDS | 25.0% |
| !! | AGCACTTATATGGAAATTTT+AGG | - | chr8.4:43940497-43940516 | MS.gene36839:CDS | 25.0% |
| !! | ATTTTATGTTGAGATACGAA+GGG | - | chr8.4:43940830-43940849 | MS.gene36839:CDS | 25.0% |
| !! | GTTTTGTGACATTTATGTAT+AGG | + | chr8.4:43939753-43939772 | None:intergenic | 25.0% |
| !! | TTTTTATTGTTTTCGTTGGT+TGG | - | chr8.4:43938571-43938590 | MS.gene36839:CDS | 25.0% |
| !!! | GTTCTTTTTTCAATACAACT+AGG | - | chr8.4:43938680-43938699 | MS.gene36839:intron | 25.0% |
| !!! | GTTTTTTATTTCTTAACACC+AGG | - | chr8.4:43940417-43940436 | MS.gene36839:CDS | 25.0% |
| !!! | TCATTTTTTGATGTGTCAAA+TGG | - | chr8.4:43940943-43940962 | MS.gene36839:CDS | 25.0% |
| AACATCATATTGCCTAACAA+TGG | - | chr8.4:43941236-43941255 | MS.gene36839:CDS | 30.0% | |
| AAGAATATGGCTTGAAATCT+AGG | - | chr8.4:43939601-43939620 | MS.gene36839:CDS | 30.0% | |
| AATCAAGAGTAAATTAGGTG+TGG | - | chr8.4:43940031-43940050 | MS.gene36839:CDS | 30.0% | |
| ACAAAGTCTTCAATAGTAGT+TGG | + | chr8.4:43939417-43939436 | None:intergenic | 30.0% | |
| ACATACATCCTAGAAAATAC+TGG | + | chr8.4:43940062-43940081 | None:intergenic | 30.0% | |
| ACATTAAAAAAGGAAGCTGA+TGG | - | chr8.4:43940886-43940905 | MS.gene36839:CDS | 30.0% | |
| ATCAGTACATATCAGCATAA+GGG | + | chr8.4:43939061-43939080 | None:intergenic | 30.0% | |
| ATTATGTTGCTCATTGGTAT+AGG | - | chr8.4:43941088-43941107 | MS.gene36839:CDS | 30.0% | |
| CAAAGTCTTCAATAGTAGTT+GGG | + | chr8.4:43939416-43939435 | None:intergenic | 30.0% | |
| CTAACAATGGACCAAAATTA+TGG | - | chr8.4:43941249-43941268 | MS.gene36839:CDS | 30.0% | |
| GAAACAACAACAAACTTTGA+TGG | - | chr8.4:43938383-43938402 | MS.gene36839:CDS | 30.0% | |
| GAGATTGGAGACATTAAAAA+AGG | - | chr8.4:43940876-43940895 | MS.gene36839:CDS | 30.0% | |
| GGTTATGATGATTATGATGT+AGG | - | chr8.4:43939168-43939187 | MS.gene36839:CDS | 30.0% | |
| GTCAATTAACATATTGTGTC+TGG | - | chr8.4:43941163-43941182 | MS.gene36839:CDS | 30.0% | |
| GTTTCTTGAAAGGAAGATAT+GGG | - | chr8.4:43940147-43940166 | MS.gene36839:CDS | 30.0% | |
| TACATGACTAACAGAATTGT+TGG | - | chr8.4:43940799-43940818 | MS.gene36839:CDS | 30.0% | |
| TAGAGCAAAAACAAAAGCTT+TGG | - | chr8.4:43939917-43939936 | MS.gene36839:CDS | 30.0% | |
| TCAACAATTGCAAAAGCTAT+GGG | + | chr8.4:43940221-43940240 | None:intergenic | 30.0% | |
| TCCAATCTCTTCTGAATTAT+AGG | + | chr8.4:43940865-43940884 | None:intergenic | 30.0% | |
| TCCTATAATTCAGAAGAGAT+TGG | - | chr8.4:43940861-43940880 | MS.gene36839:CDS | 30.0% | |
| TCCTATCAGTGTTACAAATT+TGG | + | chr8.4:43938845-43938864 | None:intergenic | 30.0% | |
| TGTTTCTTGAAAGGAAGATA+TGG | - | chr8.4:43940146-43940165 | MS.gene36839:CDS | 30.0% | |
| TTTCTTGAAAGGAAGATATG+GGG | - | chr8.4:43940148-43940167 | MS.gene36839:CDS | 30.0% | |
| TTTGATGCTAAGTAGATATC+AGG | - | chr8.4:43939890-43939909 | MS.gene36839:CDS | 30.0% | |
| ! | AAAATAGTTGTTGTTGATGG+TGG | - | chr8.4:43939348-43939367 | MS.gene36839:CDS | 30.0% |
| ! | ATCCTGAATCAACTAAGTTT+TGG | - | chr8.4:43938866-43938885 | MS.gene36839:CDS | 30.0% |
| ! | GATTTTATGTTGAGATACGA+AGG | - | chr8.4:43940829-43940848 | MS.gene36839:CDS | 30.0% |
| ! | GGTAAAATAGTTGTTGTTGA+TGG | - | chr8.4:43939345-43939364 | MS.gene36839:CDS | 30.0% |
| ! | TACCAAAACTTAGTTGATTC+AGG | + | chr8.4:43938871-43938890 | None:intergenic | 30.0% |
| ! | TGCAAAAGGTGTAATGAATT+AGG | - | chr8.4:43941407-43941426 | MS.gene36839:CDS | 30.0% |
| ! | TTATGTGTGAAGCACTTATA+TGG | - | chr8.4:43940487-43940506 | MS.gene36839:CDS | 30.0% |
| ! | TTGGTTATATTTTGCTCATC+TGG | - | chr8.4:43941133-43941152 | MS.gene36839:CDS | 30.0% |
| ! | TTTTATGTTGAGATACGAAG+GGG | - | chr8.4:43940831-43940850 | MS.gene36839:CDS | 30.0% |
| !! | AAGCATTGAAAGAAGCTTTA+TGG | - | chr8.4:43940536-43940555 | MS.gene36839:CDS | 30.0% |
| !! | AATTTTAGGAAGAGATTTCC+TGG | - | chr8.4:43940511-43940530 | MS.gene36839:CDS | 30.0% |
| !! | ATTTTGATGAAAATTGGGCT+TGG | - | chr8.4:43939280-43939299 | MS.gene36839:CDS | 30.0% |
| !! | CATAATTTTGGTCCATTGTT+AGG | + | chr8.4:43941251-43941270 | None:intergenic | 30.0% |
| AAAAGACTTGTGCATGTAGA+AGG | - | chr8.4:43940995-43941014 | MS.gene36839:CDS | 35.0% | |
| AAGAGTAAATTAGGTGTGGA+TGG | - | chr8.4:43940035-43940054 | MS.gene36839:CDS | 35.0% | |
| AAGATTAGATTCCACCACAA+AGG | - | chr8.4:43938721-43938740 | MS.gene36839:CDS | 35.0% | |
| AAGTATGAAGAGGATCAATG+AGG | - | chr8.4:43940606-43940625 | MS.gene36839:CDS | 35.0% | |
| AATTGTTGAGGCTGAAACAA+AGG | - | chr8.4:43940232-43940251 | MS.gene36839:CDS | 35.0% | |
| AATTTCTTGGCTATGAGAGT+AGG | + | chr8.4:43939798-43939817 | None:intergenic | 35.0% | |
| ACCAATTATCTCAATCGTTG+AGG | - | chr8.4:43940765-43940784 | MS.gene36839:CDS | 35.0% | |
| AGAACTGCTGTGAAAGAATA+TGG | - | chr8.4:43939588-43939607 | MS.gene36839:CDS | 35.0% | |
| AGAGTAAATTAGGTGTGGAT+GGG | - | chr8.4:43940036-43940055 | MS.gene36839:CDS | 35.0% | |
| ATGGTTTACTAACCTTCTTC+TGG | - | chr8.4:43940265-43940284 | MS.gene36839:CDS | 35.0% | |
| ATTCATATCTGACCAACAGA+AGG | - | chr8.4:43940322-43940341 | MS.gene36839:CDS | 35.0% | |
| ATTTGAACCTGATGGTACTT+GGG | - | chr8.4:43938789-43938808 | MS.gene36839:CDS | 35.0% | |
| CAACATATTGCATGAACACA+TGG | + | chr8.4:43941039-43941058 | None:intergenic | 35.0% | |
| CAATTATCTCAATCGTTGAG+GGG | - | chr8.4:43940767-43940786 | MS.gene36839:CDS | 35.0% | |
| CAGCATATTTAATGCCCTTA+TGG | + | chr8.4:43938972-43938991 | None:intergenic | 35.0% | |
| CATCAGGAAGTTTGAACTTT+GGG | + | chr8.4:43939512-43939531 | None:intergenic | 35.0% | |
| CATCAGTACATATCAGCATA+AGG | + | chr8.4:43939062-43939081 | None:intergenic | 35.0% | |
| CATTTAAATATGCAGGTAGC+GGG | + | chr8.4:43938762-43938781 | None:intergenic | 35.0% | |
| CCAATTATCTCAATCGTTGA+GGG | - | chr8.4:43940766-43940785 | MS.gene36839:CDS | 35.0% | |
| CCATTTAAATATGCAGGTAG+CGG | + | chr8.4:43938763-43938782 | None:intergenic | 35.0% | |
| CTCAACAATTGCAAAAGCTA+TGG | + | chr8.4:43940222-43940241 | None:intergenic | 35.0% | |
| CTCATCATTTGTCTTTCTTC+TGG | + | chr8.4:43941342-43941361 | None:intergenic | 35.0% | |
| CTTATGCTGATATGTACTGA+TGG | - | chr8.4:43939060-43939079 | MS.gene36839:intron | 35.0% | |
| GAGGAAAACATTGATACTGA+GGG | - | chr8.4:43939087-43939106 | MS.gene36839:intron | 35.0% | |
| GAGTTGTTAAGAAGTAATCC+AGG | - | chr8.4:43939996-43940015 | MS.gene36839:CDS | 35.0% | |
| GCAGAGAGAAAAATACCAAA+GGG | - | chr8.4:43941464-43941483 | MS.gene36839:CDS | 35.0% | |
| GCCAAATTTGTAACACTGAT+AGG | - | chr8.4:43938841-43938860 | MS.gene36839:CDS | 35.0% | |
| GGTCAATTATTAACTGCTGT+GGG | - | chr8.4:43940170-43940189 | MS.gene36839:CDS | 35.0% | |
| GGTGAAATATTTGAACCTGA+TGG | - | chr8.4:43938781-43938800 | MS.gene36839:CDS | 35.0% | |
| TAAAAAAGGAAGCTGATGGT+TGG | - | chr8.4:43940890-43940909 | MS.gene36839:CDS | 35.0% | |
| TACAAACAGAGTGCAAAACT+AGG | - | chr8.4:43939862-43939881 | MS.gene36839:intron | 35.0% | |
| TACTCACAAGACTTACTTTC+AGG | - | chr8.4:43939713-43939732 | MS.gene36839:CDS | 35.0% | |
| TATTTGAACCTGATGGTACT+TGG | - | chr8.4:43938788-43938807 | MS.gene36839:CDS | 35.0% | |
| TCAGTACATATCAGCATAAG+GGG | + | chr8.4:43939060-43939079 | None:intergenic | 35.0% | |
| TCCATTGCCTTATCAAATTC+AGG | + | chr8.4:43940586-43940605 | None:intergenic | 35.0% | |
| TGAGGAAAACATTGATACTG+AGG | - | chr8.4:43939086-43939105 | MS.gene36839:intron | 35.0% | |
| TGCAGAGAGAAAAATACCAA+AGG | - | chr8.4:43941463-43941482 | MS.gene36839:CDS | 35.0% | |
| TTCATATCTCCTGACCAATT+AGG | + | chr8.4:43940919-43940938 | None:intergenic | 35.0% | |
| TTCTTGAAAGGAAGATATGG+GGG | - | chr8.4:43940149-43940168 | MS.gene36839:CDS | 35.0% | |
| TTGATTAAAACTGTGCTTCC+TGG | + | chr8.4:43940017-43940036 | None:intergenic | 35.0% | |
| ! | AAAGCTTTAATGCGCATAGT+AGG | + | chr8.4:43939843-43939862 | None:intergenic | 35.0% |
| ! | ACATGTGTAGCTTGTGTAAT+TGG | + | chr8.4:43941645-43941664 | None:intergenic | 35.0% |
| ! | ATGGATTAAGTACCTTCTGT+TGG | + | chr8.4:43940337-43940356 | None:intergenic | 35.0% |
| ! | CATAGCTTTTGCAATTGTTG+AGG | - | chr8.4:43940220-43940239 | MS.gene36839:CDS | 35.0% |
| ! | GAAGACTTTGTTGATGAAGA+TGG | - | chr8.4:43939426-43939445 | MS.gene36839:CDS | 35.0% |
| ! | GATATGTACTGATGGTAATG+AGG | - | chr8.4:43939068-43939087 | MS.gene36839:intron | 35.0% |
| ! | TCAACAGTTGGCCATAATTT+TGG | + | chr8.4:43941263-43941282 | None:intergenic | 35.0% |
| ! | TTAAAGTATCAACTAGTCCC+TGG | + | chr8.4:43940438-43940457 | None:intergenic | 35.0% |
| !! | AAAAGCTTTGGAGATGATTG+AGG | - | chr8.4:43939929-43939948 | MS.gene36839:CDS | 35.0% |
| !! | AAAGCTTTGGAGATGATTGA+GGG | - | chr8.4:43939930-43939949 | MS.gene36839:CDS | 35.0% |
| !! | AAATGGTGTTGATCAGTATG+TGG | - | chr8.4:43940960-43940979 | MS.gene36839:CDS | 35.0% |
| !! | ATTTTGCTCATCTGGTGTTA+AGG | - | chr8.4:43941141-43941160 | MS.gene36839:CDS | 35.0% |
| !! | CTTGATGGTTGTTTCTTGAA+AGG | - | chr8.4:43940137-43940156 | MS.gene36839:CDS | 35.0% |
| !! | GGGACTAGTTGATACTTTAA+AGG | - | chr8.4:43940438-43940457 | MS.gene36839:CDS | 35.0% |
| AAACAAAGGACTCATGGTCA+TGG | - | chr8.4:43940246-43940265 | MS.gene36839:CDS | 40.0% | |
| AAACAGAGTGCAAAACTAGG+TGG | - | chr8.4:43939865-43939884 | MS.gene36839:intron | 40.0% | |
| AAACTGCAGAAGGTTGAAGA+AGG | - | chr8.4:43941367-43941386 | MS.gene36839:CDS | 40.0% | |
| AAAGCTCAAAGTGAGACACT+AGG | - | chr8.4:43941858-43941877 | MS.gene36839:CDS | 40.0% | |
| AACAGAGTGCAAAACTAGGT+GGG | - | chr8.4:43939866-43939885 | MS.gene36839:intron | 40.0% | |
| AAGATGTCCATGAGTTTGTG+AGG | - | chr8.4:43938944-43938963 | MS.gene36839:CDS | 40.0% | |
| AATACCAAAGGGTGGAAACA+AGG | - | chr8.4:43941475-43941494 | MS.gene36839:CDS | 40.0% | |
| ACAGTGAATCATGTCAAGGA+GGG | - | chr8.4:43939324-43939343 | MS.gene36839:CDS | 40.0% | |
| ACATGATTCACTGTCTCTTC+TGG | + | chr8.4:43939318-43939337 | None:intergenic | 40.0% | |
| ACCAGGTGTCTCATTTCTAA+TGG | + | chr8.4:43939037-43939056 | None:intergenic | 40.0% | |
| ACCATTAGAAATGAGACACC+TGG | - | chr8.4:43939033-43939052 | MS.gene36839:intron | 40.0% | |
| AGAAGGTTGAAGAAGGTAGA+TGG | - | chr8.4:43941374-43941393 | MS.gene36839:CDS | 40.0% | |
| AGAGACAGTGAATCATGTCA+AGG | - | chr8.4:43939320-43939339 | MS.gene36839:CDS | 40.0% | |
| AGATGTCCATGAGTTTGTGA+GGG | - | chr8.4:43938945-43938964 | MS.gene36839:CDS | 40.0% | |
| AGGTGTCTCATTTCTAATGG+TGG | + | chr8.4:43939034-43939053 | None:intergenic | 40.0% | |
| ATGGAACTGTCAGATGCAAA+AGG | - | chr8.4:43941393-43941412 | MS.gene36839:CDS | 40.0% | |
| ATGGGTAATGCATCAACAGT+TGG | + | chr8.4:43941275-43941294 | None:intergenic | 40.0% | |
| CAAATTCAGATCCAGATCCA+AGG | + | chr8.4:43939251-43939270 | None:intergenic | 40.0% | |
| CAACCATCAAGACCAATCAA+AGG | + | chr8.4:43940128-43940147 | None:intergenic | 40.0% | |
| CAATGAGCAACATAATCCTC+AGG | + | chr8.4:43941084-43941103 | None:intergenic | 40.0% | |
| CACAGTGCCTGAATTTGATA+AGG | - | chr8.4:43940576-43940595 | MS.gene36839:CDS | 40.0% | |
| CCAAAGTTCAAACTTCCTGA+TGG | - | chr8.4:43939510-43939529 | MS.gene36839:CDS | 40.0% | |
| CCAGATGAAGTAAGTGAAGA+TGG | - | chr8.4:43939471-43939490 | MS.gene36839:CDS | 40.0% | |
| CCATCAGGAAGTTTGAACTT+TGG | + | chr8.4:43939513-43939532 | None:intergenic | 40.0% | |
| CCATCTTCACTTACTTCATC+TGG | + | chr8.4:43939474-43939493 | None:intergenic | 40.0% | |
| CCCTCAACGATTGAGATAAT+TGG | + | chr8.4:43940769-43940788 | None:intergenic | 40.0% | |
| CCGCTACCTGCATATTTAAA+TGG | - | chr8.4:43938760-43938779 | MS.gene36839:CDS | 40.0% | |
| CTAACATATGGAGGCTGAAT+GGG | + | chr8.4:43941293-43941312 | None:intergenic | 40.0% | |
| CTGAGGATTATGTTGCTCAT+TGG | - | chr8.4:43941082-43941101 | MS.gene36839:CDS | 40.0% | |
| GAGAGAAAAATACCAAAGGG+TGG | - | chr8.4:43941467-43941486 | MS.gene36839:CDS | 40.0% | |
| GAGATAAACAAGGGTAGTGA+GGG | - | chr8.4:43939114-43939133 | MS.gene36839:CDS | 40.0% | |
| GAGGGTGATGAGATAAACAA+GGG | - | chr8.4:43939105-43939124 | MS.gene36839:CDS | 40.0% | |
| GCAGGTAAATAACATGTGTG+AGG | - | chr8.4:43940708-43940727 | MS.gene36839:CDS | 40.0% | |
| GCATCTAAGAAGTTATGCAG+AGG | - | chr8.4:43939974-43939993 | MS.gene36839:CDS | 40.0% | |
| GCCTGAATTTGATAAGGCAA+TGG | - | chr8.4:43940582-43940601 | MS.gene36839:CDS | 40.0% | |
| GGGTCAATTATTAACTGCTG+TGG | - | chr8.4:43940169-43940188 | MS.gene36839:CDS | 40.0% | |
| GGTGATGACTTTAGTGAATC+TGG | - | chr8.4:43939189-43939208 | MS.gene36839:CDS | 40.0% | |
| GGTGATGAGTTTAGTGAATC+TGG | - | chr8.4:43939147-43939166 | MS.gene36839:CDS | 40.0% | |
| GGTGTCTCATTTCTAATGGT+GGG | + | chr8.4:43939033-43939052 | None:intergenic | 40.0% | |
| GTGCACCTGAATAATGTGTT+TGG | - | chr8.4:43941114-43941133 | MS.gene36839:CDS | 40.0% | |
| GTTCAATGAAAAAGCTCCTG+AGG | - | chr8.4:43941065-43941084 | MS.gene36839:CDS | 40.0% | |
| GTTTACTAACCTTCTTCTGG+AGG | - | chr8.4:43940268-43940287 | MS.gene36839:CDS | 40.0% | |
| TCACAAGACTTACTTTCAGG+TGG | - | chr8.4:43939716-43939735 | MS.gene36839:CDS | 40.0% | |
| TCACAGGCTACACAACAAAA+GGG | - | chr8.4:43941813-43941832 | MS.gene36839:CDS | 40.0% | |
| TCAGTATGTGGTCAACTTGA+TGG | - | chr8.4:43940972-43940991 | MS.gene36839:CDS | 40.0% | |
| TGACCTAACTGAAAAGTCAC+AGG | + | chr8.4:43939543-43939562 | None:intergenic | 40.0% | |
| TGAGATAAACAAGGGTAGTG+AGG | - | chr8.4:43939113-43939132 | MS.gene36839:CDS | 40.0% | |
| TGAGGGTGATGAGATAAACA+AGG | - | chr8.4:43939104-43939123 | MS.gene36839:CDS | 40.0% | |
| TGGATCTGGATCTGAATTTG+AGG | - | chr8.4:43939251-43939270 | MS.gene36839:CDS | 40.0% | |
| TGTTAAGATCCTCCAGAAGA+AGG | + | chr8.4:43940280-43940299 | None:intergenic | 40.0% | |
| TTAACTGCTGTGGGTAAAGA+TGG | - | chr8.4:43940179-43940198 | MS.gene36839:CDS | 40.0% | |
| TTCAACCTTCTGCAGTTTGT+AGG | + | chr8.4:43941365-43941384 | None:intergenic | 40.0% | |
| TTGATGCAAATGTTGAGCAC+AGG | - | chr8.4:43940464-43940483 | MS.gene36839:CDS | 40.0% | |
| ! | AGGCAATGGAAAGTATGAAG+AGG | - | chr8.4:43940596-43940615 | MS.gene36839:CDS | 40.0% |
| ! | CATGTGTGAGGCTTTTAACA+TGG | - | chr8.4:43940720-43940739 | MS.gene36839:CDS | 40.0% |
| ! | GCAGAAATGTCAAGGTTTTG+AGG | - | chr8.4:43938457-43938476 | MS.gene36839:CDS | 40.0% |
| ! | TCATACTCAGTGTGATTTGC+AGG | - | chr8.4:43940690-43940709 | MS.gene36839:CDS | 40.0% |
| !! | AAGTTTTGGTATGTACTCCC+AGG | - | chr8.4:43938880-43938899 | MS.gene36839:CDS | 40.0% |
| !! | ACAATGACAAGCATTGAACG+TGG | - | chr8.4:43938344-43938363 | MS.gene36839:CDS | 40.0% |
| !! | AGACCTTTGATTGGTCTTGA+TGG | - | chr8.4:43940122-43940141 | MS.gene36839:CDS | 40.0% |
| !! | ATGGTGGATCTATAGAGGAT+GGG | - | chr8.4:43939364-43939383 | MS.gene36839:CDS | 40.0% |
| !! | TGATTTGTTCCTTGAGTCTC+AGG | + | chr8.4:43941615-43941634 | None:intergenic | 40.0% |
| !! | TGTTGATGGTGGATCTATAG+AGG | - | chr8.4:43939359-43939378 | MS.gene36839:CDS | 40.0% |
| AAACTTTGATGGAAACGCGC+AGG | - | chr8.4:43938394-43938413 | MS.gene36839:CDS | 45.0% | |
| ACAACAGAAGAACCTGCAAG+GGG | - | chr8.4:43941432-43941451 | MS.gene36839:CDS | 45.0% | |
| ACACAACAGAAGAACCTGCA+AGG | - | chr8.4:43941430-43941449 | MS.gene36839:CDS | 45.0% | |
| ACAGAGTGCAAAACTAGGTG+GGG | - | chr8.4:43939867-43939886 | MS.gene36839:CDS | 45.0% | |
| AGACTTGTGCATGTAGAAGG+TGG | - | chr8.4:43940998-43941017 | MS.gene36839:CDS | 45.0% | |
| AGAGGATCAATGAGGAAGCA+TGG | - | chr8.4:43940614-43940633 | MS.gene36839:CDS | 45.0% | |
| AGGCTGAAACAAAGGACTCA+TGG | - | chr8.4:43940240-43940259 | MS.gene36839:CDS | 45.0% | |
| AGGTGAATGTTCCTTTGTGG+TGG | + | chr8.4:43938735-43938754 | None:intergenic | 45.0% | |
| ATGAAACCATGGCGAAGAAG+AGG | - | chr8.4:43938420-43938439 | MS.gene36839:CDS | 45.0% | |
| ATGAGCCTACAAACTGCAGA+AGG | - | chr8.4:43941357-43941376 | MS.gene36839:CDS | 45.0% | |
| CACAACAGAAGAACCTGCAA+GGG | - | chr8.4:43941431-43941450 | MS.gene36839:CDS | 45.0% | |
| CAGAGGTGAATGTTCCTTTG+TGG | + | chr8.4:43938738-43938757 | None:intergenic | 45.0% | |
| CATATGTTAGGAGGACACCA+GGG | - | chr8.4:43941303-43941322 | MS.gene36839:CDS | 45.0% | |
| CATGTAAGATAGCCTTTGCG+AGG | - | chr8.4:43940093-43940112 | MS.gene36839:CDS | 45.0% | |
| CCATTCAGCCTCCATATGTT+AGG | - | chr8.4:43941291-43941310 | MS.gene36839:CDS | 45.0% | |
| CCTAACATATGGAGGCTGAA+TGG | + | chr8.4:43941294-43941313 | None:intergenic | 45.0% | |
| CTGATGGTTGGACTCCTAAT+TGG | - | chr8.4:43940902-43940921 | MS.gene36839:CDS | 45.0% | |
| GACAGTGAATCATGTCAAGG+AGG | - | chr8.4:43939323-43939342 | MS.gene36839:CDS | 45.0% | |
| GAGTTTGTGAGGGTCCATAA+GGG | - | chr8.4:43938955-43938974 | MS.gene36839:CDS | 45.0% | |
| GCTGCTTCTGTTACACATGT+TGG | - | chr8.4:43941708-43941727 | MS.gene36839:intron | 45.0% | |
| GCTTCTTTCAATGCTTCACC+AGG | + | chr8.4:43940532-43940551 | None:intergenic | 45.0% | |
| GGAGATGATTGAGGGAAGTA+TGG | - | chr8.4:43939938-43939957 | MS.gene36839:CDS | 45.0% | |
| GTCACAGGCTACACAACAAA+AGG | - | chr8.4:43941812-43941831 | MS.gene36839:CDS | 45.0% | |
| TATGGACCCTCACAAACTCA+TGG | + | chr8.4:43938954-43938973 | None:intergenic | 45.0% | |
| TGAGTTTGTGAGGGTCCATA+AGG | - | chr8.4:43938954-43938973 | MS.gene36839:CDS | 45.0% | |
| TGGTATGTACTCCCAGGAAA+AGG | - | chr8.4:43938886-43938905 | MS.gene36839:CDS | 45.0% | |
| TGTAGAAGGTGGCAGTTAAC+TGG | - | chr8.4:43941009-43941028 | MS.gene36839:CDS | 45.0% | |
| TTCAGCCTCCATATGTTAGG+AGG | - | chr8.4:43941294-43941313 | MS.gene36839:CDS | 45.0% | |
| ! | AGTGAATCTGGTGATGATGC+TGG | - | chr8.4:43939201-43939220 | MS.gene36839:CDS | 45.0% |
| ! | GAGCCTGTGACTTTTCAGTT+AGG | - | chr8.4:43939537-43939556 | MS.gene36839:CDS | 45.0% |
| ! | GAGGATCAATGAGGAAGCAT+GGG | - | chr8.4:43940615-43940634 | MS.gene36839:CDS | 45.0% |
| ! | GATGATTGAGGGAAGTATGG+TGG | - | chr8.4:43939941-43939960 | MS.gene36839:CDS | 45.0% |
| ! | GCAGAAGTAGCTTGTCTAAC+AGG | + | chr8.4:43941681-43941700 | None:intergenic | 45.0% |
| ! | GTCTTTCTTCTGGCCTTCTT+GGG | + | chr8.4:43941332-43941351 | None:intergenic | 45.0% |
| ! | GTTGATGTAGGTTCTGACCT+TGG | - | chr8.4:43939231-43939250 | MS.gene36839:CDS | 45.0% |
| ! | TGGATGGGCCAGTATTTTCT+AGG | - | chr8.4:43940051-43940070 | MS.gene36839:CDS | 45.0% |
| ! | TGGTGGATCTATAGAGGATG+GGG | - | chr8.4:43939365-43939384 | MS.gene36839:CDS | 45.0% |
| ! | TGTCTTTCTTCTGGCCTTCT+TGG | + | chr8.4:43941333-43941352 | None:intergenic | 45.0% |
| ! | TTCACCTTGTTTCCACCCTT+TGG | + | chr8.4:43941482-43941501 | None:intergenic | 45.0% |
| ! | TTTTCTCTTCCTTCCCCTTC+TGG | + | chr8.4:43941841-43941860 | None:intergenic | 45.0% |
| !! | ACAACAAAAGGGTGCCAGAA+GGG | - | chr8.4:43941824-43941843 | MS.gene36839:CDS | 45.0% |
| !! | AGATGCAGCCTGTTGATTTC+CGG | + | chr8.4:43941790-43941809 | None:intergenic | 45.0% |
| !! | CTCATTTCTAATGGTGGGTG+TGG | + | chr8.4:43939028-43939047 | None:intergenic | 45.0% |
| !! | GACAAGCATTGAACGTGGAA+AGG | - | chr8.4:43938349-43938368 | MS.gene36839:CDS | 45.0% |
| !! | GATGGTGGATCTATAGAGGA+TGG | - | chr8.4:43939363-43939382 | MS.gene36839:CDS | 45.0% |
| !! | GCTGGTGAAGAAGTTGATGT+AGG | - | chr8.4:43939219-43939238 | MS.gene36839:CDS | 45.0% |
| !! | GGTGTGGATTGGTTATGATC+AGG | + | chr8.4:43939012-43939031 | None:intergenic | 45.0% |
| !! | TTCTAATGGTGGGTGTGGAT+TGG | + | chr8.4:43939023-43939042 | None:intergenic | 45.0% |
| AAGGGTAGTGAGGGTGATGA+GGG | - | chr8.4:43939123-43939142 | MS.gene36839:CDS | 50.0% | |
| ACCTGATGGTACTTGGGACA+TGG | - | chr8.4:43938795-43938814 | MS.gene36839:CDS | 50.0% | |
| AGCAGGAACCGGAAATCAAC+AGG | - | chr8.4:43941779-43941798 | MS.gene36839:CDS | 50.0% | |
| ATCACTCCTCTTCTTCGCCA+TGG | + | chr8.4:43938429-43938448 | None:intergenic | 50.0% | |
| ATGGCGAAGAAGAGGAGTGA+TGG | - | chr8.4:43938428-43938447 | MS.gene36839:CDS | 50.0% | |
| CAGTGGAAAGGCGAAGAAGA+AGG | - | chr8.4:43938319-43938338 | MS.gene36839:CDS | 50.0% | |
| CATATCAGCATAAGGGGACC+AGG | + | chr8.4:43939054-43939073 | None:intergenic | 50.0% | |
| CCATATGTTAGGAGGACACC+AGG | - | chr8.4:43941302-43941321 | MS.gene36839:CDS | 50.0% | |
| CCTGGTGTCCTCCTAACATA+TGG | + | chr8.4:43941305-43941324 | None:intergenic | 50.0% | |
| GAAATGTCCAAACACCCACC+TGG | - | chr8.4:43940640-43940659 | MS.gene36839:CDS | 50.0% | |
| GGAAACGCGCAGAAATGTCA+AGG | - | chr8.4:43938449-43938468 | MS.gene36839:CDS | 50.0% | |
| GGCAAGCTAAGAGTCAAGCT+AGG | - | chr8.4:43941751-43941770 | MS.gene36839:CDS | 50.0% | |
| GGCGAAGAACAACAGTGGAA+AGG | - | chr8.4:43938307-43938326 | MS.gene36839:CDS | 50.0% | |
| GGTGTCCTCCTAACATATGG+AGG | + | chr8.4:43941302-43941321 | None:intergenic | 50.0% | |
| GGTTGGACTCCTAATTGGTC+AGG | - | chr8.4:43940907-43940926 | MS.gene36839:CDS | 50.0% | |
| GTGACACATCCTGAGACTCA+AGG | - | chr8.4:43941603-43941622 | MS.gene36839:intron | 50.0% | |
| TCCATGTCCCAAGTACCATC+AGG | + | chr8.4:43938799-43938818 | None:intergenic | 50.0% | |
| TGCCTCATAGATGCAGTGCT+TGG | + | chr8.4:43941735-43941754 | None:intergenic | 50.0% | |
| ! | AGGCACTGCAGACCTTTGAT+TGG | - | chr8.4:43940113-43940132 | MS.gene36839:CDS | 50.0% |
| ! | GACCAAGCACTGCATCTATG+AGG | - | chr8.4:43941730-43941749 | MS.gene36839:CDS | 50.0% |
| ! | GATCAATGAGGAAGCATGGG+AGG | - | chr8.4:43940618-43940637 | MS.gene36839:CDS | 50.0% |
| ! | GTAGGTTCTGACCTTGGATC+TGG | - | chr8.4:43939237-43939256 | MS.gene36839:CDS | 50.0% |
| ! | GTTGATTTCCGGTTCCTGCT+TGG | + | chr8.4:43941779-43941798 | None:intergenic | 50.0% |
| !! | CAACAAAAGGGTGCCAGAAG+GGG | - | chr8.4:43941825-43941844 | MS.gene36839:CDS | 50.0% |
| !! | CACAACAAAAGGGTGCCAGA+AGG | - | chr8.4:43941823-43941842 | MS.gene36839:CDS | 50.0% |
| ACAGGCTGCATCTGTGTCAC+AGG | - | chr8.4:43941797-43941816 | MS.gene36839:CDS | 55.0% | |
| ACTGTCTAAGCCCACCAGCT+AGG | + | chr8.4:43938912-43938931 | None:intergenic | 55.0% | |
| AGTCAAGCTAGGAGCCAAGC+AGG | - | chr8.4:43941762-43941781 | MS.gene36839:CDS | 55.0% | |
| CAAGGGTAGTGAGGGTGATG+AGG | - | chr8.4:43939122-43939141 | MS.gene36839:CDS | 55.0% | |
| CAGGAAAAGGCCTAGCTGGT+GGG | - | chr8.4:43938899-43938918 | MS.gene36839:CDS | 55.0% | |
| CCAAACACCCACCTGGTATG+TGG | - | chr8.4:43940647-43940666 | MS.gene36839:CDS | 55.0% | |
| CCACATACCAGGTGGGTGTT+TGG | + | chr8.4:43940650-43940669 | None:intergenic | 55.0% | |
| CGCGCAGGAGAATGAAACCA+TGG | - | chr8.4:43938409-43938428 | MS.gene36839:CDS | 55.0% | |
| GTCACAGGCTCATCACCATC+AGG | + | chr8.4:43939528-43939547 | None:intergenic | 55.0% | |
| TGCATCTGCTTTCCCCTTGC+AGG | + | chr8.4:43941447-43941466 | None:intergenic | 55.0% | |
| ! | ACGTGGAAAGGCGCAGAAGA+AGG | - | chr8.4:43938361-43938380 | MS.gene36839:CDS | 55.0% |
| ! | CACCAGCTAGGCCTTTTCCT+GGG | + | chr8.4:43938900-43938919 | None:intergenic | 55.0% |
| !! | AAAAGGGTGCCAGAAGGGGA+AGG | - | chr8.4:43941829-43941848 | MS.gene36839:CDS | 55.0% |
| !! | AGCTGGTGGGCTTAGACAGT+TGG | - | chr8.4:43938912-43938931 | MS.gene36839:CDS | 55.0% |
| !! | ATATGCAGGTAGCGGGTCAG+AGG | + | chr8.4:43938755-43938774 | None:intergenic | 55.0% |
| !! | GCTGGTGGGCTTAGACAGTT+GGG | - | chr8.4:43938913-43938932 | MS.gene36839:CDS | 55.0% |
| ACCCACCTGGTATGTGGAGC+AGG | - | chr8.4:43940653-43940672 | MS.gene36839:CDS | 60.0% | |
| AGGTCTGCAGTGCCTCGCAA+AGG | + | chr8.4:43940108-43940127 | None:intergenic | 60.0% | |
| CCAGGAAAAGGCCTAGCTGG+TGG | - | chr8.4:43938898-43938917 | MS.gene36839:CDS | 60.0% | |
| CCCACCTGGTATGTGGAGCA+GGG | - | chr8.4:43940654-43940673 | MS.gene36839:CDS | 60.0% | |
| CCCTGCTCCACATACCAGGT+GGG | + | chr8.4:43940657-43940676 | None:intergenic | 60.0% | |
| CTCCCAGGAAAAGGCCTAGC+TGG | - | chr8.4:43938895-43938914 | MS.gene36839:CDS | 60.0% | |
| GACACCAGGGAGACCCAAGA+AGG | - | chr8.4:43941316-43941335 | MS.gene36839:CDS | 60.0% | |
| GCTAGGAGCCAAGCAGGAAC+CGG | - | chr8.4:43941768-43941787 | MS.gene36839:CDS | 60.0% | |
| GGTAGTGAGGGTGATGAGGG+TGG | - | chr8.4:43939126-43939145 | MS.gene36839:CDS | 60.0% | |
| TGTGCCCTGCTCCACATACC+AGG | + | chr8.4:43940661-43940680 | None:intergenic | 60.0% | |
| ! | CCACCAGCTAGGCCTTTTCC+TGG | + | chr8.4:43938901-43938920 | None:intergenic | 60.0% |
| GCCCTGCTCCACATACCAGG+TGG | + | chr8.4:43940658-43940677 | None:intergenic | 65.0% | |
| ! | CTGGCCTTCTTGGGTCTCCC+TGG | + | chr8.4:43941323-43941342 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 43938305 | 43941905 | 43938305 | ID=MS.gene36839 |
| chr8.4 | mRNA | 43938305 | 43941905 | 43938305 | ID=MS.gene36839.t1;Parent=MS.gene36839 |
| chr8.4 | exon | 43941730 | 43941905 | 43941730 | ID=MS.gene36839.t1.exon1;Parent=MS.gene36839.t1 |
| chr8.4 | CDS | 43941730 | 43941905 | 43941730 | ID=cds.MS.gene36839.t1;Parent=MS.gene36839.t1 |
| chr8.4 | exon | 43939867 | 43941508 | 43939867 | ID=MS.gene36839.t1.exon2;Parent=MS.gene36839.t1 |
| chr8.4 | CDS | 43939867 | 43941508 | 43939867 | ID=cds.MS.gene36839.t1;Parent=MS.gene36839.t1 |
| chr8.4 | exon | 43939101 | 43939771 | 43939101 | ID=MS.gene36839.t1.exon3;Parent=MS.gene36839.t1 |
| chr8.4 | CDS | 43939101 | 43939771 | 43939101 | ID=cds.MS.gene36839.t1;Parent=MS.gene36839.t1 |
| chr8.4 | exon | 43938714 | 43939002 | 43938714 | ID=MS.gene36839.t1.exon4;Parent=MS.gene36839.t1 |
| chr8.4 | CDS | 43938714 | 43939002 | 43938714 | ID=cds.MS.gene36839.t1;Parent=MS.gene36839.t1 |
| chr8.4 | exon | 43938305 | 43938619 | 43938305 | ID=MS.gene36839.t1.exon5;Parent=MS.gene36839.t1 |
| chr8.4 | CDS | 43938305 | 43938619 | 43938305 | ID=cds.MS.gene36839.t1;Parent=MS.gene36839.t1 |
| Gene Sequence |
| Protein sequence |
