Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37518.t1 | XP_013444989.1 | 98.7 | 151 | 2 | 0 | 1 | 151 | 1 | 151 | 1.20E-67 | 265.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37518.t1 | O64644 | 71.2 | 125 | 35 | 1 | 27 | 150 | 27 | 151 | 8.8e-46 | 184.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37518.t1 | G7ZXR9 | 98.7 | 151 | 2 | 0 | 1 | 151 | 1 | 151 | 9.0e-68 | 265.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007416 | MS.gene37518 | PPI |
| MS.gene20079 | MS.gene37518 | PPI |
| MS.gene37518 | MS.gene007531 | PPI |
| MS.gene37518 | MS.gene22417 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37518.t1 | MTR_8g033340 | 98.675 | 151 | 2 | 0 | 1 | 151 | 1 | 151 | 2.03e-106 | 300 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37518.t1 | AT2G45640 | 66.447 | 152 | 50 | 1 | 1 | 151 | 1 | 152 | 2.90e-58 | 178 |
| MS.gene37518.t1 | AT2G45640 | 65.132 | 152 | 49 | 2 | 1 | 151 | 1 | 149 | 1.03e-54 | 169 |
Find 39 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATCTGAACTTCATCTTT+AGG | 0.252278 | 8.3:+60399794 | None:intergenic |
| GGTCTGCCGCCTTGTCGTTT+TGG | 0.303236 | 8.3:+60400063 | None:intergenic |
| GGCAAGGCTTTAGCCGATCT+TGG | 0.386747 | 8.3:-60395985 | MS.gene37518:CDS |
| GCGTTTCTTCTTCTTGCAGC+AGG | 0.399744 | 8.3:+60397394 | None:intergenic |
| CCTCTTGGTGGTGGAGGTAA+TGG | 0.405437 | 8.3:+60400042 | None:intergenic |
| GGAGGCGGACCTCTTGGTGG+TGG | 0.416084 | 8.3:+60400033 | None:intergenic |
| AAGACATTGTCTTGTGGAAC+TGG | 0.431600 | 8.3:-60396021 | MS.gene37518:CDS |
| GGCGGACCTCTTGGTGGTGG+AGG | 0.442590 | 8.3:+60400036 | None:intergenic |
| TGCGCAGATTGGTGATTACT+TGG | 0.452787 | 8.3:-60395887 | MS.gene37518:intron |
| CAAGACGAGGACGGGAGGAT+GGG | 0.455095 | 8.3:+60400010 | None:intergenic |
| AAGACGAGGACGGGAGGATG+GGG | 0.461573 | 8.3:+60400011 | None:intergenic |
| TCAAGACGAGGACGGGAGGA+TGG | 0.466252 | 8.3:+60400009 | None:intergenic |
| CTTTACCTCAAAACCAAGAT+CGG | 0.479352 | 8.3:+60395972 | None:intergenic |
| CTCCGTGTGTTCACTAAGAT+AGG | 0.484530 | 8.3:-60399860 | MS.gene37518:CDS |
| AACTGGTTCAAGACGAGGAC+GGG | 0.487547 | 8.3:+60400002 | None:intergenic |
| AGACGAGGACGGGAGGATGG+GGG | 0.492042 | 8.3:+60400012 | None:intergenic |
| GATAGGAAGCCATCATTCAA+TGG | 0.497710 | 8.3:-60399843 | MS.gene37518:CDS |
| TTACCTCTTGAACTTTGAAA+CGG | 0.506136 | 8.3:+60397332 | None:intergenic |
| TGAACCAGTTGATCGCGAAA+AGG | 0.565047 | 8.3:-60399989 | MS.gene37518:intron |
| GTGAACACACGGAGGAGCAA+GGG | 0.568130 | 8.3:+60399869 | None:intergenic |
| GATTGGTGATTACTTGGATG+TGG | 0.571029 | 8.3:-60395881 | MS.gene37518:CDS |
| ATGAAGTTCAGATTTATACA+TGG | 0.575884 | 8.3:-60399787 | MS.gene37518:CDS |
| CTCGAAGAAATGAGCGACGG+AGG | 0.579538 | 8.3:-60400087 | None:intergenic |
| AGTGAACACACGGAGGAGCA+AGG | 0.581241 | 8.3:+60399868 | None:intergenic |
| CGAAAGAATACATACAAGAT+CGG | 0.582794 | 8.3:+60399739 | None:intergenic |
| TGGCCGTTTCAAAGTTCAAG+AGG | 0.586342 | 8.3:-60397335 | MS.gene37518:intron |
| TGAACACACGGAGGAGCAAG+GGG | 0.609653 | 8.3:+60399870 | None:intergenic |
| TGGAAGATTAGATGATGGCA+AGG | 0.613081 | 8.3:-60396001 | MS.gene37518:CDS |
| CGATCAACTGGTTCAAGACG+AGG | 0.618341 | 8.3:+60399997 | None:intergenic |
| GTGGGCAAGACATTGTCTTG+TGG | 0.619911 | 8.3:-60396027 | MS.gene37518:CDS |
| CAACTGGTTCAAGACGAGGA+CGG | 0.621624 | 8.3:+60400001 | None:intergenic |
| GACGGAGGACCAAAACGACA+AGG | 0.629621 | 8.3:-60400072 | MS.gene37518:CDS |
| TTCCTATCTTAGTGAACACA+CGG | 0.638856 | 8.3:+60399858 | None:intergenic |
| TGGTTCAAGACGAGGACGGG+AGG | 0.647083 | 8.3:+60400005 | None:intergenic |
| CCATTACCTCCACCACCAAG+AGG | 0.666000 | 8.3:-60400042 | MS.gene37518:CDS |
| GGAACTGGAAGATTAGATGA+TGG | 0.686597 | 8.3:-60396006 | MS.gene37518:CDS |
| AGTCTCGAAGAAATGAGCGA+CGG | 0.704284 | 8.3:-60400090 | None:intergenic |
| GGAGGACCAAAACGACAAGG+CGG | 0.709504 | 8.3:-60400069 | MS.gene37518:CDS |
| CTATCTTAGTGAACACACGG+AGG | 0.795134 | 8.3:+60399861 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAATATTATTATAGAT+AGG | - | chr8.3:60396960-60396979 | MS.gene37518:intron | 10.0% |
| !!! | TATTAATGTATATTTTGTAT+AGG | - | chr8.3:60398517-60398536 | MS.gene37518:intron | 10.0% |
| !! | AGTTATTGAATAAACTAAAA+AGG | + | chr8.3:60397938-60397957 | None:intergenic | 15.0% |
| !! | ATAAATATTATATGTATCAG+AGG | + | chr8.3:60399020-60399039 | None:intergenic | 15.0% |
| !! | TAAATATTATATGTATCAGA+GGG | + | chr8.3:60399019-60399038 | None:intergenic | 15.0% |
| !! | TATAGATTATTAGGTTTATT+TGG | - | chr8.3:60396424-60396443 | MS.gene37518:intron | 15.0% |
| !! | TTTAAACATGTTATAAGTTA+AGG | - | chr8.3:60399245-60399264 | MS.gene37518:intron | 15.0% |
| !!! | ACTTTCATAATTTGTTATAT+TGG | + | chr8.3:60399563-60399582 | None:intergenic | 15.0% |
| !!! | ATAACTTTTTGGAAAAAATA+TGG | + | chr8.3:60399810-60399829 | None:intergenic | 15.0% |
| !! | AAAAGAAAAAAAACAGCATT+AGG | - | chr8.3:60396399-60396418 | MS.gene37518:intron | 20.0% |
| !! | AAAGAAAAAAAACAGCATTA+GGG | - | chr8.3:60396400-60396419 | MS.gene37518:intron | 20.0% |
| !! | ATATAAACCATGAATAAACT+AGG | + | chr8.3:60397218-60397237 | None:intergenic | 20.0% |
| !! | ATTATTATAGATAGGCTTAT+AGG | - | chr8.3:60396968-60396987 | MS.gene37518:intron | 20.0% |
| !! | CCAAAAACTAAAAGTTATAA+CGG | + | chr8.3:60398448-60398467 | None:intergenic | 20.0% |
| !! | GTGAATAAGTGTTTAATTAA+GGG | - | chr8.3:60397019-60397038 | MS.gene37518:intron | 20.0% |
| !! | TAATAATAACCCTAAAATGA+GGG | - | chr8.3:60399458-60399477 | MS.gene37518:intron | 20.0% |
| !! | TAGTTTATTCATGGTTTATA+TGG | - | chr8.3:60397217-60397236 | MS.gene37518:intron | 20.0% |
| !! | TATAAATTACTTGTGTTTGT+GGG | + | chr8.3:60399192-60399211 | None:intergenic | 20.0% |
| !! | TATGCACAAAAAGAAAATAA+TGG | + | chr8.3:60398684-60398703 | None:intergenic | 20.0% |
| !! | TGAAATAAATACTACATCAT+AGG | - | chr8.3:60398827-60398846 | MS.gene37518:intron | 20.0% |
| !! | TGTGAATAAGTGTTTAATTA+AGG | - | chr8.3:60397018-60397037 | MS.gene37518:intron | 20.0% |
| !! | TTAATAATAACCCTAAAATG+AGG | - | chr8.3:60399457-60399476 | MS.gene37518:intron | 20.0% |
| !! | TTAATGATGATATACTCTAT+TGG | - | chr8.3:60397062-60397081 | MS.gene37518:intron | 20.0% |
| !! | TTATAAATTACTTGTGTTTG+TGG | + | chr8.3:60399193-60399212 | None:intergenic | 20.0% |
| !! | TTATGATCATCAATAAAACA+AGG | + | chr8.3:60398023-60398042 | None:intergenic | 20.0% |
| !! | TTCAAATTATTAGTCAGAAT+AGG | - | chr8.3:60398159-60398178 | MS.gene37518:intron | 20.0% |
| !!! | ATAAAAAGAAGTTAGGTTTT+AGG | + | chr8.3:60396017-60396036 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTATAAGCTTTTG+TGG | - | chr8.3:60396785-60396804 | MS.gene37518:intron | 20.0% |
| !!! | ATTTCTTTTTAGCTTATGAT+TGG | - | chr8.3:60398491-60398510 | MS.gene37518:intron | 20.0% |
| !!! | CAAGTCAAAAGATTTTATAT+TGG | + | chr8.3:60398983-60399002 | None:intergenic | 20.0% |
| !!! | CTTATAACGGAATTTTAATT+AGG | + | chr8.3:60398208-60398227 | None:intergenic | 20.0% |
| !!! | TAATGCTGTTTTTTTTCTTT+TGG | + | chr8.3:60396400-60396419 | None:intergenic | 20.0% |
| !!! | TAATGTGTTTTGCTTTTTTT+GGG | - | chr8.3:60398745-60398764 | MS.gene37518:intron | 20.0% |
| !!! | TATAACTTTTAGTTTTTGGA+TGG | - | chr8.3:60398449-60398468 | MS.gene37518:intron | 20.0% |
| !!! | TATGTATAAGCTATTTCTAT+GGG | - | chr8.3:60396482-60396501 | MS.gene37518:intron | 20.0% |
| !!! | TCATTTTAGGGTTATTATTA+AGG | + | chr8.3:60399458-60399477 | None:intergenic | 20.0% |
| !!! | TTATGTATAAGCTATTTCTA+TGG | - | chr8.3:60396481-60396500 | MS.gene37518:intron | 20.0% |
| !!! | TTGTTTTCAGCTTAAAAAAA+TGG | - | chr8.3:60397705-60397724 | MS.gene37518:intron | 20.0% |
| !!! | TTTTGACTTGTATTATTGTT+GGG | - | chr8.3:60398993-60399012 | MS.gene37518:intron | 20.0% |
| ! | AAAAATCATCCATTGAATGA+TGG | + | chr8.3:60396117-60396136 | None:intergenic | 25.0% |
| ! | AAAACACTTGTAAGACTATT+TGG | + | chr8.3:60396620-60396639 | None:intergenic | 25.0% |
| ! | AAAATTAACAAGGTCAAGAA+TGG | + | chr8.3:60396041-60396060 | None:intergenic | 25.0% |
| ! | AAACACTTGTAAGACTATTT+GGG | + | chr8.3:60396619-60396638 | None:intergenic | 25.0% |
| ! | AAATGAAAAAGTAGGAAATG+GGG | - | chr8.3:60398409-60398428 | MS.gene37518:intron | 25.0% |
| ! | ACTTCAAGATTCATATATTG+GGG | - | chr8.3:60399122-60399141 | MS.gene37518:intron | 25.0% |
| ! | AGAAATAGATTATGCATAAG+CGG | - | chr8.3:60397416-60397435 | MS.gene37518:intron | 25.0% |
| ! | AGAATAGGAAATGAAAAAGT+AGG | - | chr8.3:60398401-60398420 | MS.gene37518:intron | 25.0% |
| ! | AGAATAGGAAATGAAAATGT+AGG | - | chr8.3:60398174-60398193 | MS.gene37518:intron | 25.0% |
| ! | AGGACAATATTCTCTTATAA+CGG | + | chr8.3:60398221-60398240 | None:intergenic | 25.0% |
| ! | ATAAACCGTAAAATGAGAAA+AGG | + | chr8.3:60397615-60397634 | None:intergenic | 25.0% |
| ! | ATGAAGTTCAGATTTATACA+TGG | - | chr8.3:60396161-60396180 | MS.gene37518:intron | 25.0% |
| ! | ATGAATAAACTAGGAGAAAA+GGG | + | chr8.3:60397209-60397228 | None:intergenic | 25.0% |
| ! | ATGATCATCAATAAAACAGA+AGG | + | chr8.3:60398241-60398260 | None:intergenic | 25.0% |
| ! | ATTTCACAATTAAACCAACT+TGG | + | chr8.3:60398813-60398832 | None:intergenic | 25.0% |
| ! | CACTTCAAGATTCATATATT+GGG | - | chr8.3:60399121-60399140 | MS.gene37518:intron | 25.0% |
| ! | CATTAGGGTTATAGATTATT+AGG | - | chr8.3:60396415-60396434 | MS.gene37518:intron | 25.0% |
| ! | GAAATGAAAAAGTAGGAAAT+GGG | - | chr8.3:60398408-60398427 | MS.gene37518:intron | 25.0% |
| ! | GAATGGAATAAAAAGAAGTT+AGG | + | chr8.3:60396024-60396043 | None:intergenic | 25.0% |
| ! | GCAAAATTCTTTATACTCAT+TGG | - | chr8.3:60397542-60397561 | MS.gene37518:intron | 25.0% |
| ! | GGAAATAGAGAAAATTAACA+AGG | + | chr8.3:60396051-60396070 | None:intergenic | 25.0% |
| ! | TAAATCTGAACTTCATCTTT+AGG | + | chr8.3:60396157-60396176 | None:intergenic | 25.0% |
| ! | TCACTTCAAGATTCATATAT+TGG | - | chr8.3:60399120-60399139 | MS.gene37518:intron | 25.0% |
| ! | TTTGAGTGAGCTTAAAAAAA+TGG | - | chr8.3:60397281-60397300 | MS.gene37518:intron | 25.0% |
| ! | TTTGTGTTTCCTGATAAAAA+TGG | - | chr8.3:60398593-60398612 | MS.gene37518:intron | 25.0% |
| !! | AAAAGATGGGAATAACTTTT+TGG | + | chr8.3:60399821-60399840 | None:intergenic | 25.0% |
| !! | AATTTTACACTAATGTCCAA+TGG | + | chr8.3:60397156-60397175 | None:intergenic | 25.0% |
| !! | ACATGTTTAGAAGATGTTTT+CGG | + | chr8.3:60396829-60396848 | None:intergenic | 25.0% |
| !! | CTTTTTACAGCATATACATT+TGG | + | chr8.3:60399767-60399786 | None:intergenic | 25.0% |
| !! | GTTATAACGGAATTTCAATT+AGG | + | chr8.3:60398435-60398454 | None:intergenic | 25.0% |
| !! | TGTATTCAACAATTTTTCCA+TGG | - | chr8.3:60398074-60398093 | MS.gene37518:intron | 25.0% |
| !! | TTTCAACTTATTTAGAGCTT+AGG | - | chr8.3:60397751-60397770 | MS.gene37518:intron | 25.0% |
| !! | TTTTCAAACTTGTGCAAAAT+AGG | + | chr8.3:60399347-60399366 | None:intergenic | 25.0% |
| !!! | AACAACTTAATTTGCACTTT+TGG | - | chr8.3:60396450-60396469 | MS.gene37518:intron | 25.0% |
| !!! | CCGTTATAACTTTTAGTTTT+TGG | - | chr8.3:60398445-60398464 | MS.gene37518:intron | 25.0% |
| !!! | CGCAGTGTTTTTATTTTTTT+AGG | - | chr8.3:60396230-60396249 | MS.gene37518:intron | 25.0% |
| !!! | CTTTATTCCTTTGTTTTTGA+AGG | + | chr8.3:60398120-60398139 | None:intergenic | 25.0% |
| !!! | CTTTTGACTTGTATTATTGT+TGG | - | chr8.3:60398992-60399011 | MS.gene37518:intron | 25.0% |
| !!! | GAGTATTATAGAGTTTTTTG+TGG | - | chr8.3:60398876-60398895 | MS.gene37518:intron | 25.0% |
| !!! | GTAATGTGTTTTGCTTTTTT+TGG | - | chr8.3:60398744-60398763 | MS.gene37518:intron | 25.0% |
| !!! | TTTGTTTTCATAAGCTATCT+TGG | - | chr8.3:60396531-60396550 | MS.gene37518:intron | 25.0% |
| AAATGAAAATGTAGGAAACG+GGG | - | chr8.3:60398182-60398201 | MS.gene37518:intron | 30.0% | |
| ACTATATTGACAGTAACCAA+AGG | + | chr8.3:60399735-60399754 | None:intergenic | 30.0% | |
| ATAGCATAAACACTTCTGTA+AGG | - | chr8.3:60397648-60397667 | MS.gene37518:intron | 30.0% | |
| CAATCTCTATAATCGAAGAT+GGG | + | chr8.3:60397817-60397836 | None:intergenic | 30.0% | |
| CATGAATAAACTAGGAGAAA+AGG | + | chr8.3:60397210-60397229 | None:intergenic | 30.0% | |
| CGAAAGAATACATACAAGAT+CGG | + | chr8.3:60396212-60396231 | None:intergenic | 30.0% | |
| GAAATGAAAATGTAGGAAAC+GGG | - | chr8.3:60398181-60398200 | MS.gene37518:intron | 30.0% | |
| GATTGCAACTTACAAAAGAT+GGG | + | chr8.3:60399834-60399853 | None:intergenic | 30.0% | |
| GGAAATGAAAAAGTAGGAAA+TGG | - | chr8.3:60398407-60398426 | MS.gene37518:intron | 30.0% | |
| GGAAATGAAAATGTAGGAAA+CGG | - | chr8.3:60398180-60398199 | MS.gene37518:intron | 30.0% | |
| TCAAATAAGCCAATCAAAAC+AGG | - | chr8.3:60396913-60396932 | MS.gene37518:intron | 30.0% | |
| TCAATCTCTATAATCGAAGA+TGG | + | chr8.3:60397818-60397837 | None:intergenic | 30.0% | |
| TCATGATTTCTCAAAGATGT+CGG | + | chr8.3:60397105-60397124 | None:intergenic | 30.0% | |
| TGATTGCAACTTACAAAAGA+TGG | + | chr8.3:60399835-60399854 | None:intergenic | 30.0% | |
| TGTTTAATTAAGGGTGAGTT+TGG | - | chr8.3:60397028-60397047 | MS.gene37518:intron | 30.0% | |
| TTTCAACTTATTGAGAGCTT+AGG | - | chr8.3:60397334-60397353 | MS.gene37518:intron | 30.0% | |
| ! | CAATAACTGCAAAATGCTTT+TGG | - | chr8.3:60397950-60397969 | MS.gene37518:intron | 30.0% |
| ! | CTTTTCTCCTAGTTTATTCA+TGG | - | chr8.3:60397208-60397227 | MS.gene37518:intron | 30.0% |
| ! | GAGAAAAGAGTTTCATTTTC+TGG | + | chr8.3:60399278-60399297 | None:intergenic | 30.0% |
| ! | GGAATGTTATTGCTGTTAAT+CGG | - | chr8.3:60399502-60399521 | MS.gene37518:intron | 30.0% |
| ! | GGTTATTATTAAGGTGCTAA+AGG | + | chr8.3:60399449-60399468 | None:intergenic | 30.0% |
| ! | GTCTTACAAGTGTTTTATGT+CGG | - | chr8.3:60396624-60396643 | MS.gene37518:intron | 30.0% |
| ! | TAACCATAGACACTTTTGTA+AGG | - | chr8.3:60397250-60397269 | MS.gene37518:intron | 30.0% |
| ! | TGTATTCAACAATTTTTCCG+TGG | - | chr8.3:60398294-60398313 | MS.gene37518:intron | 30.0% |
| ! | TGTCTCCTTTTCTCATTTTA+CGG | - | chr8.3:60397607-60397626 | MS.gene37518:intron | 30.0% |
| ! | TTACCTCTTGAACTTTGAAA+CGG | + | chr8.3:60398619-60398638 | None:intergenic | 30.0% |
| ! | TTTTGAGCCTTCAAAAACAA+AGG | - | chr8.3:60398110-60398129 | MS.gene37518:intron | 30.0% |
| ! | TTTTGTATAGGTCAAAGAAG+TGG | - | chr8.3:60398529-60398548 | MS.gene37518:intron | 30.0% |
| !! | AAACCTTACAAAAGTGTCTA+TGG | + | chr8.3:60397256-60397275 | None:intergenic | 30.0% |
| !! | AAAGAGTTTCATTTTCTGGT+AGG | + | chr8.3:60399274-60399293 | None:intergenic | 30.0% |
| !! | ATGGATGATTTTTCAGTTAG+AGG | - | chr8.3:60396124-60396143 | MS.gene37518:intron | 30.0% |
| !! | TAATTTGCACTTTTGGCTAA+GGG | - | chr8.3:60396457-60396476 | MS.gene37518:intron | 30.0% |
| !! | TGGATGATTTTTCAGTTAGA+GGG | - | chr8.3:60396125-60396144 | MS.gene37518:intron | 30.0% |
| !!! | AGAAGTTAGGTTTTAGGTTT+AGG | + | chr8.3:60396011-60396030 | None:intergenic | 30.0% |
| !!! | GAAGTTAGGTTTTAGGTTTA+GGG | + | chr8.3:60396010-60396029 | None:intergenic | 30.0% |
| !!! | GCTGTTTTTTTTCTTTTGGT+CGG | + | chr8.3:60396396-60396415 | None:intergenic | 30.0% |
| !!! | TGTTTTGGAACATTATAGAG+AGG | - | chr8.3:60396699-60396718 | MS.gene37518:intron | 30.0% |
| !!! | TTAATTTGCACTTTTGGCTA+AGG | - | chr8.3:60396456-60396475 | MS.gene37518:intron | 30.0% |
| AAAACTCGAACATCATTCCA+TGG | + | chr8.3:60398094-60398113 | None:intergenic | 35.0% | |
| AAAAGTCGAACATCATTCCA+CGG | + | chr8.3:60398314-60398333 | None:intergenic | 35.0% | |
| AAACTCAACACACAACTATG+AGG | + | chr8.3:60396349-60396368 | None:intergenic | 35.0% | |
| AATAATGGCAGTAACTAGAG+TGG | + | chr8.3:60398669-60398688 | None:intergenic | 35.0% | |
| ACAATCCCAAATATGCTCTA+AGG | + | chr8.3:60396682-60396701 | None:intergenic | 35.0% | |
| ACTGTAATCGAGTATCATTC+TGG | - | chr8.3:60399410-60399429 | MS.gene37518:intron | 35.0% | |
| AGCTCACTTTGTAATTCCAT+TGG | - | chr8.3:60397137-60397156 | MS.gene37518:intron | 35.0% | |
| AGTTGTGTGTTGAGTTTAAG+TGG | - | chr8.3:60396352-60396371 | MS.gene37518:intron | 35.0% | |
| ATGTATCTTAAGTGCTTTCC+TGG | - | chr8.3:60397441-60397460 | MS.gene37518:intron | 35.0% | |
| ATTATAGAGAGGCTTATGAC+AGG | - | chr8.3:60396710-60396729 | MS.gene37518:intron | 35.0% | |
| CAAAAAATTGCACACAGAAG+CGG | + | chr8.3:60398938-60398957 | None:intergenic | 35.0% | |
| CTTTACCTCAAAACCAAGAT+CGG | + | chr8.3:60399979-60399998 | None:intergenic | 35.0% | |
| TATTCGTCAGAACTCAGAAT+AGG | - | chr8.3:60398386-60398405 | MS.gene37518:intron | 35.0% | |
| TCGGTAAATAAGCTCAAGTA+AGG | - | chr8.3:60396643-60396662 | MS.gene37518:intron | 35.0% | |
| TGCAATCAAGTGACAAAGAT+AGG | + | chr8.3:60399893-60399912 | None:intergenic | 35.0% | |
| TTCCTATCTTAGTGAACACA+CGG | + | chr8.3:60396093-60396112 | None:intergenic | 35.0% | |
| ! | AAAGTGGATCCCTCATTTTA+GGG | + | chr8.3:60399470-60399489 | None:intergenic | 35.0% |
| ! | ATCTTGCTTGCTAACTTACT+GGG | - | chr8.3:60399620-60399639 | MS.gene37518:intron | 35.0% |
| ! | GGAAAAAGACTAGTTAAGTG+TGG | + | chr8.3:60399048-60399067 | None:intergenic | 35.0% |
| ! | GTTTTCATAAGCTATCTTGG+AGG | - | chr8.3:60396534-60396553 | MS.gene37518:intron | 35.0% |
| ! | TAAAGTGGATCCCTCATTTT+AGG | + | chr8.3:60399471-60399490 | None:intergenic | 35.0% |
| !! | AATTTGCACTTTTGGCTAAG+GGG | - | chr8.3:60396458-60396477 | MS.gene37518:intron | 35.0% |
| !! | GAGCATATTTGGGATTGTTT+TGG | - | chr8.3:60396684-60396703 | MS.gene37518:intron | 35.0% |
| !! | GTTTCAATGCTTTGAGGTAA+GGG | + | chr8.3:60399702-60399721 | None:intergenic | 35.0% |
| !! | TTGTTTTTCAATGCGCAGAT+TGG | - | chr8.3:60400050-60400069 | MS.gene37518:CDS | 35.0% |
| !! | TTTCAATGCTTTGAGGTAAG+GGG | + | chr8.3:60399701-60399720 | None:intergenic | 35.0% |
| !!! | GTTTTTTTTCTTTTGGTCGG+TGG | + | chr8.3:60396393-60396412 | None:intergenic | 35.0% |
| !!! | TTAACTAGTCTTTTTCCCAG+TGG | - | chr8.3:60399051-60399070 | MS.gene37518:intron | 35.0% |
| !!! | TTGAAACGGCCATTTTTATC+AGG | + | chr8.3:60398605-60398624 | None:intergenic | 35.0% |
| AAATGAGGGATCCACTTTAG+AGG | - | chr8.3:60399472-60399491 | MS.gene37518:intron | 40.0% | |
| AACACACAACTATGAGGTTC+TGG | + | chr8.3:60396343-60396362 | None:intergenic | 40.0% | |
| AAGACATTGTCTTGTGGAAC+TGG | - | chr8.3:60399927-60399946 | MS.gene37518:intron | 40.0% | |
| AATGAGGGATCCACTTTAGA+GGG | - | chr8.3:60399473-60399492 | MS.gene37518:intron | 40.0% | |
| ACAGTCCGAAATATGCTCTA+AGG | + | chr8.3:60396737-60396756 | None:intergenic | 40.0% | |
| ACTTGATTGCACTATGAAGG+TGG | - | chr8.3:60399902-60399921 | MS.gene37518:intron | 40.0% | |
| AGCCTTAAACAACTTCTGTC+AGG | + | chr8.3:60397982-60398001 | None:intergenic | 40.0% | |
| AGCTTCTGTCGCAATATTGA+GGG | + | chr8.3:60397476-60397495 | None:intergenic | 40.0% | |
| AGGTAAATCTTCTCTCTACG+TGG | - | chr8.3:60398633-60398652 | MS.gene37518:intron | 40.0% | |
| AGGTAATCTGCGCATTACTA+GGG | - | chr8.3:60398847-60398866 | MS.gene37518:intron | 40.0% | |
| CACGGACACATGATTCTAAT+TGG | + | chr8.3:60396278-60396297 | None:intergenic | 40.0% | |
| CAGGACCTTAGAGCATATTT+CGG | - | chr8.3:60396729-60396748 | MS.gene37518:intron | 40.0% | |
| CAGGTCCTTAGAGCATATTT+GGG | - | chr8.3:60396674-60396693 | MS.gene37518:intron | 40.0% | |
| CAGTAAGTTAGCAAGCAAGA+TGG | + | chr8.3:60399621-60399640 | None:intergenic | 40.0% | |
| CTTGATTGCACTATGAAGGT+GGG | - | chr8.3:60399903-60399922 | MS.gene37518:intron | 40.0% | |
| GATAGGAAGCCATCATTCAA+TGG | - | chr8.3:60396105-60396124 | MS.gene37518:intron | 40.0% | |
| GCCTTAAACAACTTCTGTCA+GGG | + | chr8.3:60397981-60398000 | None:intergenic | 40.0% | |
| GCTAAGTGAAATGCACTCAT+TGG | - | chr8.3:60399386-60399405 | MS.gene37518:intron | 40.0% | |
| GGAACTGGAAGATTAGATGA+TGG | - | chr8.3:60399942-60399961 | MS.gene37518:intron | 40.0% | |
| GTCACTTGATTGCACTATGA+AGG | - | chr8.3:60399899-60399918 | MS.gene37518:intron | 40.0% | |
| TAGGTAATCTGCGCATTACT+AGG | - | chr8.3:60398846-60398865 | MS.gene37518:intron | 40.0% | |
| TGTCGCAATATTGAGGGAAA+GGG | + | chr8.3:60397470-60397489 | None:intergenic | 40.0% | |
| ! | AACACTTCTGAGAGACTGTT+TGG | + | chr8.3:60396876-60396895 | None:intergenic | 40.0% |
| ! | ACACTTCTGAGAGACTGTTT+GGG | + | chr8.3:60396875-60396894 | None:intergenic | 40.0% |
| ! | ATCCACTTTAGAGGGAAAAC+AGG | - | chr8.3:60399481-60399500 | MS.gene37518:intron | 40.0% |
| ! | CATCTTGCTTGCTAACTTAC+TGG | - | chr8.3:60399619-60399638 | MS.gene37518:intron | 40.0% |
| ! | GAGCATATTTCGGACTGTTT+TGG | - | chr8.3:60396739-60396758 | MS.gene37518:intron | 40.0% |
| ! | GATTGGTGATTACTTGGATG+TGG | - | chr8.3:60400067-60400086 | MS.gene37518:CDS | 40.0% |
| ! | TGGAAGATTAGATGATGGCA+AGG | - | chr8.3:60399947-60399966 | MS.gene37518:intron | 40.0% |
| !! | CTCAAAGCATTGAAACCCTA+CGG | - | chr8.3:60399706-60399725 | MS.gene37518:intron | 40.0% |
| !! | GGTTTCAATGCTTTGAGGTA+AGG | + | chr8.3:60399703-60399722 | None:intergenic | 40.0% |
| !! | TCAGAAGTGTTAATGTCAGC+AGG | - | chr8.3:60396885-60396904 | MS.gene37518:intron | 40.0% |
| !! | TTCCTGTTTTCCCTCTAAAG+TGG | + | chr8.3:60399486-60399505 | None:intergenic | 40.0% |
| !!! | TTTAGCCGATCTTGGTTTTG+AGG | - | chr8.3:60399971-60399990 | MS.gene37518:intron | 40.0% |
| ACAGGTGCTTGGAGCATATT+TGG | - | chr8.3:60396931-60396950 | MS.gene37518:intron | 45.0% | |
| AGCCAATCAAAACAGGTGCT+TGG | - | chr8.3:60396920-60396939 | MS.gene37518:intron | 45.0% | |
| AGCCTAACAATATCGCGACA+CGG | + | chr8.3:60396296-60396315 | None:intergenic | 45.0% | |
| AGTAACCAAAGGTTGCCGTA+GGG | + | chr8.3:60399724-60399743 | None:intergenic | 45.0% | |
| ATGCTCTGTTCTGTTCCACT+GGG | + | chr8.3:60399069-60399088 | None:intergenic | 45.0% | |
| ATGGCAGTAACTAGAGTGGT+AGG | + | chr8.3:60398665-60398684 | None:intergenic | 45.0% | |
| CAGGTGCTTGGAGCATATTT+GGG | - | chr8.3:60396932-60396951 | MS.gene37518:intron | 45.0% | |
| CGTAGGGTTTCAATGCTTTG+AGG | + | chr8.3:60399708-60399727 | None:intergenic | 45.0% | |
| CTATCTTAGTGAACACACGG+AGG | + | chr8.3:60396090-60396109 | None:intergenic | 45.0% | |
| CTCAAGTAAGGCAATACAGC+AGG | - | chr8.3:60396655-60396674 | MS.gene37518:intron | 45.0% | |
| CTCCGTGTGTTCACTAAGAT+AGG | - | chr8.3:60396088-60396107 | MS.gene37518:intron | 45.0% | |
| CTGTCGCAATATTGAGGGAA+AGG | + | chr8.3:60397471-60397490 | None:intergenic | 45.0% | |
| GAGCTTCTGTCGCAATATTG+AGG | + | chr8.3:60397477-60397496 | None:intergenic | 45.0% | |
| GCAGGTCCTTAGAGCATATT+TGG | - | chr8.3:60396673-60396692 | MS.gene37518:intron | 45.0% | |
| GCCCTGACAGAAGTTGTTTA+AGG | - | chr8.3:60397977-60397996 | MS.gene37518:intron | 45.0% | |
| GTCGCAATATTGAGGGAAAG+GGG | + | chr8.3:60397469-60397488 | None:intergenic | 45.0% | |
| TCGCAATATTGAGGGAAAGG+GGG | + | chr8.3:60397468-60397487 | None:intergenic | 45.0% | |
| TGAACCAGTTGATCGCGAAA+AGG | - | chr8.3:60395959-60395978 | MS.gene37518:intron | 45.0% | |
| TGGCCGTTTCAAAGTTCAAG+AGG | - | chr8.3:60398613-60398632 | MS.gene37518:intron | 45.0% | |
| ! | AGTACCTTTTCGCGATCAAC+TGG | + | chr8.3:60395966-60395985 | None:intergenic | 45.0% |
| ! | CTAGGAGAAAAGGGCATATG+TGG | + | chr8.3:60397200-60397219 | None:intergenic | 45.0% |
| ! | TGCGCAGATTGGTGATTACT+TGG | - | chr8.3:60400061-60400080 | MS.gene37518:CDS | 45.0% |
| !! | AATGCTTTGAGGTAAGGGGT+GGG | + | chr8.3:60399697-60399716 | None:intergenic | 45.0% |
| !! | TGAGGTTCTGGATTCGAACA+CGG | + | chr8.3:60396331-60396350 | None:intergenic | 45.0% |
| !!! | CTCCAAGCACCTGTTTTGAT+TGG | + | chr8.3:60396925-60396944 | None:intergenic | 45.0% |
| CAGTAACCAAAGGTTGCCGT+AGG | + | chr8.3:60399725-60399744 | None:intergenic | 50.0% | |
| CAGTAACTAGAGTGGTAGGC+AGG | + | chr8.3:60398661-60398680 | None:intergenic | 50.0% | |
| CATGCTCTGTTCTGTTCCAC+TGG | + | chr8.3:60399070-60399089 | None:intergenic | 50.0% | |
| CCACTAATGACACGCCAAGT+TGG | - | chr8.3:60398796-60398815 | MS.gene37518:intron | 50.0% | |
| GCGTTTCTTCTTCTTGCAGC+AGG | + | chr8.3:60398557-60398576 | None:intergenic | 50.0% | |
| GTCCGTGTCGCGATATTGTT+AGG | - | chr8.3:60396291-60396310 | MS.gene37518:intron | 50.0% | |
| GTGGGCAAGACATTGTCTTG+TGG | - | chr8.3:60399921-60399940 | MS.gene37518:intron | 50.0% | |
| GTGTCGCGATATTGTTAGGC+TGG | - | chr8.3:60396295-60396314 | MS.gene37518:intron | 50.0% | |
| TGAAACCCTACGGCAACCTT+TGG | - | chr8.3:60399716-60399735 | MS.gene37518:intron | 50.0% | |
| ! | AACTGGTTCAAGACGAGGAC+GGG | + | chr8.3:60395949-60395968 | None:intergenic | 50.0% |
| ! | CAACTGGTTCAAGACGAGGA+CGG | + | chr8.3:60395950-60395969 | None:intergenic | 50.0% |
| ! | CCAACTTGGCGTGTCATTAG+TGG | + | chr8.3:60398799-60398818 | None:intergenic | 50.0% |
| ! | CGATCAACTGGTTCAAGACG+AGG | + | chr8.3:60395954-60395973 | None:intergenic | 50.0% |
| ! | CTTTTGGTCGGTGGACAAAG+TGG | + | chr8.3:60396384-60396403 | None:intergenic | 50.0% |
| !! | ATGCTTTGAGGTAAGGGGTG+GGG | + | chr8.3:60399696-60399715 | None:intergenic | 50.0% |
| !! | CAATGCTTTGAGGTAAGGGG+TGG | + | chr8.3:60399698-60399717 | None:intergenic | 50.0% |
| !! | GAGGTTCTGGATTCGAACAC+GGG | + | chr8.3:60396330-60396349 | None:intergenic | 50.0% |
| AGTGAACACACGGAGGAGCA+AGG | + | chr8.3:60396083-60396102 | None:intergenic | 55.0% | |
| CCATTACCTCCACCACCAAG+AGG | - | chr8.3:60395906-60395925 | MS.gene37518:intron | 55.0% | |
| CTGCGCATTACTAGGGAGTG+TGG | - | chr8.3:60398854-60398873 | MS.gene37518:intron | 55.0% | |
| CTGGATTCGAACACGGGTCA+AGG | + | chr8.3:60396324-60396343 | None:intergenic | 55.0% | |
| GACGGAGGACCAAAACGACA+AGG | - | chr8.3:60395876-60395895 | MS.gene37518:CDS | 55.0% | |
| GGAGGACCAAAACGACAAGG+CGG | - | chr8.3:60395879-60395898 | MS.gene37518:CDS | 55.0% | |
| GTGAACACACGGAGGAGCAA+GGG | + | chr8.3:60396082-60396101 | None:intergenic | 55.0% | |
| TATTGAGGGAAAGGGGGTCC+AGG | + | chr8.3:60397462-60397481 | None:intergenic | 55.0% | |
| TGAACACACGGAGGAGCAAG+GGG | + | chr8.3:60396081-60396100 | None:intergenic | 55.0% | |
| ! | GGCAAGGCTTTAGCCGATCT+TGG | - | chr8.3:60399963-60399982 | MS.gene37518:intron | 55.0% |
| !! | CCTCTTGGTGGTGGAGGTAA+TGG | + | chr8.3:60395909-60395928 | None:intergenic | 55.0% |
| AAGACGAGGACGGGAGGATG+GGG | + | chr8.3:60395940-60395959 | None:intergenic | 60.0% | |
| ATGCAGTCGCGACACGGTTG+TGG | + | chr8.3:60398912-60398931 | None:intergenic | 60.0% | |
| CAAGACGAGGACGGGAGGAT+GGG | + | chr8.3:60395941-60395960 | None:intergenic | 60.0% | |
| CGGCTAATGCAGTCGCGACA+CGG | + | chr8.3:60398918-60398937 | None:intergenic | 60.0% | |
| TCAAGACGAGGACGGGAGGA+TGG | + | chr8.3:60395942-60395961 | None:intergenic | 60.0% | |
| TGGTTCAAGACGAGGACGGG+AGG | + | chr8.3:60395946-60395965 | None:intergenic | 60.0% | |
| !! | GGTCTGCCGCCTTGTCGTTT+TGG | + | chr8.3:60395888-60395907 | None:intergenic | 60.0% |
| AGACGAGGACGGGAGGATGG+GGG | + | chr8.3:60395939-60395958 | None:intergenic | 65.0% | |
| CGCGACACGGTTGTGGAGAG+TGG | + | chr8.3:60398905-60398924 | None:intergenic | 65.0% | |
| GGAGGAGCAAGGGGCAAGTC+TGG | + | chr8.3:60396072-60396091 | None:intergenic | 65.0% | |
| GATGGGGGAGGCGGACCTCT+TGG | + | chr8.3:60395924-60395943 | None:intergenic | 70.0% | |
| GGAGGCGGACCTCTTGGTGG+TGG | + | chr8.3:60395918-60395937 | None:intergenic | 70.0% | |
| !! | GGCGGACCTCTTGGTGGTGG+AGG | + | chr8.3:60395915-60395934 | None:intergenic | 70.0% |
| CGAGGACGGGAGGATGGGGG+AGG | + | chr8.3:60395936-60395955 | None:intergenic | 75.0% | |
| GGACGGGAGGATGGGGGAGG+CGG | + | chr8.3:60395933-60395952 | None:intergenic | 75.0% | |
| GGGGGAGGCGGACCTCTTGG+TGG | + | chr8.3:60395921-60395940 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 60395870 | 60400100 | 60395870 | ID=MS.gene37518 |
| chr8.3 | mRNA | 60395870 | 60400100 | 60395870 | ID=MS.gene37518.t1;Parent=MS.gene37518 |
| chr8.3 | exon | 60399990 | 60400100 | 60399990 | ID=MS.gene37518.t1.exon1;Parent=MS.gene37518.t1 |
| chr8.3 | CDS | 60399990 | 60400100 | 60399990 | ID=cds.MS.gene37518.t1;Parent=MS.gene37518.t1 |
| chr8.3 | exon | 60399754 | 60399897 | 60399754 | ID=MS.gene37518.t1.exon2;Parent=MS.gene37518.t1 |
| chr8.3 | CDS | 60399754 | 60399897 | 60399754 | ID=cds.MS.gene37518.t1;Parent=MS.gene37518.t1 |
| chr8.3 | exon | 60397336 | 60397431 | 60397336 | ID=MS.gene37518.t1.exon3;Parent=MS.gene37518.t1 |
| chr8.3 | CDS | 60397336 | 60397431 | 60397336 | ID=cds.MS.gene37518.t1;Parent=MS.gene37518.t1 |
| chr8.3 | exon | 60395978 | 60396049 | 60395978 | ID=MS.gene37518.t1.exon4;Parent=MS.gene37518.t1 |
| chr8.3 | CDS | 60395978 | 60396049 | 60395978 | ID=cds.MS.gene37518.t1;Parent=MS.gene37518.t1 |
| chr8.3 | exon | 60395870 | 60395902 | 60395870 | ID=MS.gene37518.t1.exon5;Parent=MS.gene37518.t1 |
| chr8.3 | CDS | 60395870 | 60395902 | 60395870 | ID=cds.MS.gene37518.t1;Parent=MS.gene37518.t1 |
| Gene Sequence |
| Protein sequence |
